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Genes within 1Mb (chr1:30821920:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -474868 sc-eQTL 7.34e-01 -0.038 0.112 0.855 B L1
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 9.81e-01 -0.00208 0.0894 0.855 B L1
ENSG00000134644 PUM1 -244071 sc-eQTL 5.23e-01 -0.0479 0.0749 0.855 B L1
ENSG00000162510 MATN1 98335 sc-eQTL 9.54e-01 0.00451 0.0788 0.855 B L1
ENSG00000162511 LAPTM5 64146 sc-eQTL 7.80e-01 -0.0172 0.0617 0.855 B L1
ENSG00000162517 PEF1 -822976 sc-eQTL 8.00e-02 -0.163 0.0925 0.855 B L1
ENSG00000186056 MATN1-AS1 103416 sc-eQTL 2.69e-01 0.0799 0.0721 0.855 B L1
ENSG00000287510 AL137857.1 90227 sc-eQTL 8.81e-01 0.0128 0.0856 0.855 B L1
ENSG00000060688 SNRNP40 -474868 sc-eQTL 9.38e-01 0.00726 0.0936 0.855 CD4T L1
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 4.17e-01 0.0593 0.073 0.855 CD4T L1
ENSG00000134644 PUM1 -244071 sc-eQTL 3.71e-01 -0.0582 0.065 0.855 CD4T L1
ENSG00000162511 LAPTM5 64146 sc-eQTL 4.83e-02 0.142 0.0715 0.855 CD4T L1
ENSG00000162517 PEF1 -822976 sc-eQTL 7.97e-01 0.0195 0.0754 0.855 CD4T L1
ENSG00000186056 MATN1-AS1 103416 sc-eQTL 9.56e-01 -0.00353 0.0645 0.855 CD4T L1
ENSG00000287510 AL137857.1 90227 sc-eQTL 5.62e-01 0.0448 0.0772 0.855 CD4T L1
ENSG00000060688 SNRNP40 -474868 sc-eQTL 7.61e-01 0.0383 0.126 0.855 CD8T L1
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 2.97e-01 -0.0873 0.0835 0.855 CD8T L1
ENSG00000134644 PUM1 -244071 sc-eQTL 1.95e-01 0.0955 0.0735 0.855 CD8T L1
ENSG00000162511 LAPTM5 64146 sc-eQTL 1.44e-02 0.174 0.0706 0.855 CD8T L1
ENSG00000162517 PEF1 -822976 sc-eQTL 9.57e-01 -0.00477 0.0882 0.855 CD8T L1
ENSG00000186056 MATN1-AS1 103416 sc-eQTL 1.40e-01 0.124 0.0835 0.855 CD8T L1
ENSG00000287510 AL137857.1 90227 sc-eQTL 4.92e-01 -0.0725 0.105 0.855 CD8T L1
ENSG00000060688 SNRNP40 -474868 sc-eQTL 3.48e-01 0.107 0.114 0.858 DC L1
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 1.42e-01 0.198 0.134 0.858 DC L1
ENSG00000134644 PUM1 -244071 sc-eQTL 7.30e-01 -0.0365 0.106 0.858 DC L1
ENSG00000162511 LAPTM5 64146 sc-eQTL 4.28e-01 -0.0599 0.0753 0.858 DC L1
ENSG00000162517 PEF1 -822976 sc-eQTL 3.03e-01 0.126 0.122 0.858 DC L1
ENSG00000168528 SERINC2 -587645 sc-eQTL 5.37e-01 -0.0769 0.124 0.858 DC L1
ENSG00000284543 LINC01226 -684306 sc-eQTL 2.16e-01 -0.102 0.0821 0.858 DC L1
ENSG00000287510 AL137857.1 90227 sc-eQTL 7.01e-01 -0.0458 0.119 0.858 DC L1
ENSG00000060688 SNRNP40 -474868 sc-eQTL 9.00e-01 0.0109 0.0863 0.855 Mono L1
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 4.74e-02 -0.212 0.106 0.855 Mono L1
ENSG00000134644 PUM1 -244071 sc-eQTL 2.00e-02 -0.159 0.0677 0.855 Mono L1
ENSG00000162511 LAPTM5 64146 sc-eQTL 2.48e-01 -0.0728 0.0629 0.855 Mono L1
ENSG00000162512 SDC3 -86838 sc-eQTL 4.43e-01 -0.0931 0.121 0.855 Mono L1
ENSG00000162517 PEF1 -822976 sc-eQTL 4.12e-01 -0.0699 0.085 0.855 Mono L1
ENSG00000168528 SERINC2 -587645 sc-eQTL 3.59e-01 0.12 0.13 0.855 Mono L1
ENSG00000284543 LINC01226 -684306 sc-eQTL 5.07e-01 0.0761 0.115 0.855 Mono L1
ENSG00000287510 AL137857.1 90227 sc-eQTL 3.08e-02 -0.215 0.0991 0.855 Mono L1
ENSG00000060688 SNRNP40 -474868 sc-eQTL 3.86e-01 -0.104 0.119 0.854 NK L1
ENSG00000121753 ADGRB2 -942973 sc-eQTL 9.15e-01 -0.011 0.103 0.854 NK L1
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 3.14e-01 -0.0825 0.0816 0.854 NK L1
ENSG00000134644 PUM1 -244071 sc-eQTL 8.35e-02 -0.148 0.0852 0.854 NK L1
ENSG00000162511 LAPTM5 64146 sc-eQTL 4.62e-02 0.196 0.0978 0.854 NK L1
ENSG00000162517 PEF1 -822976 sc-eQTL 8.07e-01 0.0176 0.0721 0.854 NK L1
ENSG00000186056 MATN1-AS1 103416 sc-eQTL 1.51e-01 0.159 0.11 0.854 NK L1
ENSG00000287510 AL137857.1 90227 sc-eQTL 6.13e-01 0.052 0.102 0.854 NK L1
ENSG00000060688 SNRNP40 -474868 sc-eQTL 2.31e-01 0.111 0.0921 0.855 Other_T L1
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 5.54e-01 0.0585 0.0987 0.855 Other_T L1
ENSG00000134644 PUM1 -244071 sc-eQTL 1.08e-02 0.225 0.0875 0.855 Other_T L1
ENSG00000162511 LAPTM5 64146 sc-eQTL 9.47e-02 0.121 0.0723 0.855 Other_T L1
ENSG00000162517 PEF1 -822976 sc-eQTL 4.10e-01 -0.0802 0.0971 0.855 Other_T L1
ENSG00000186056 MATN1-AS1 103416 sc-eQTL 3.85e-01 -0.104 0.119 0.855 Other_T L1
ENSG00000287510 AL137857.1 90227 sc-eQTL 7.10e-01 -0.0462 0.124 0.855 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -474868 sc-eQTL 2.08e-01 0.181 0.143 0.852 B_Activated L2
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 1.35e-01 0.217 0.144 0.852 B_Activated L2
ENSG00000134644 PUM1 -244071 sc-eQTL 8.54e-02 -0.231 0.134 0.852 B_Activated L2
ENSG00000162510 MATN1 98335 sc-eQTL 9.00e-01 -0.0149 0.118 0.852 B_Activated L2
ENSG00000162511 LAPTM5 64146 sc-eQTL 3.08e-01 -0.0838 0.082 0.852 B_Activated L2
ENSG00000162517 PEF1 -822976 sc-eQTL 9.12e-01 0.0156 0.14 0.852 B_Activated L2
ENSG00000186056 MATN1-AS1 103416 sc-eQTL 4.96e-01 -0.0906 0.133 0.852 B_Activated L2
ENSG00000287510 AL137857.1 90227 sc-eQTL 2.07e-01 -0.148 0.117 0.852 B_Activated L2
ENSG00000060688 SNRNP40 -474868 sc-eQTL 8.64e-01 -0.0232 0.135 0.854 B_Intermediate L2
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 6.25e-01 0.0552 0.113 0.854 B_Intermediate L2
ENSG00000134644 PUM1 -244071 sc-eQTL 7.38e-01 0.0356 0.106 0.854 B_Intermediate L2
ENSG00000162510 MATN1 98335 sc-eQTL 3.96e-01 -0.0941 0.111 0.854 B_Intermediate L2
ENSG00000162511 LAPTM5 64146 sc-eQTL 7.78e-01 0.0192 0.068 0.854 B_Intermediate L2
ENSG00000162517 PEF1 -822976 sc-eQTL 3.57e-02 -0.264 0.125 0.854 B_Intermediate L2
ENSG00000186056 MATN1-AS1 103416 sc-eQTL 2.92e-02 0.207 0.0943 0.854 B_Intermediate L2
ENSG00000287510 AL137857.1 90227 sc-eQTL 7.30e-01 0.0369 0.107 0.854 B_Intermediate L2
ENSG00000060688 SNRNP40 -474868 sc-eQTL 9.43e-01 -0.00939 0.132 0.858 B_Memory L2
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 9.39e-01 -0.00926 0.122 0.858 B_Memory L2
ENSG00000134644 PUM1 -244071 sc-eQTL 3.61e-01 -0.0966 0.106 0.858 B_Memory L2
ENSG00000162510 MATN1 98335 sc-eQTL 6.49e-01 -0.0461 0.101 0.858 B_Memory L2
ENSG00000162511 LAPTM5 64146 sc-eQTL 5.64e-01 0.0518 0.0896 0.858 B_Memory L2
ENSG00000162517 PEF1 -822976 sc-eQTL 1.99e-01 -0.154 0.119 0.858 B_Memory L2
ENSG00000186056 MATN1-AS1 103416 sc-eQTL 9.66e-02 -0.17 0.102 0.858 B_Memory L2
ENSG00000287510 AL137857.1 90227 sc-eQTL 4.59e-01 -0.0891 0.12 0.858 B_Memory L2
ENSG00000060688 SNRNP40 -474868 sc-eQTL 7.05e-01 0.0451 0.119 0.855 B_Naive1 L2
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 4.95e-01 0.0701 0.103 0.855 B_Naive1 L2
ENSG00000134644 PUM1 -244071 sc-eQTL 8.49e-01 0.0172 0.0905 0.855 B_Naive1 L2
ENSG00000162510 MATN1 98335 sc-eQTL 7.20e-01 0.033 0.0918 0.855 B_Naive1 L2
ENSG00000162511 LAPTM5 64146 sc-eQTL 7.06e-01 -0.0232 0.0613 0.855 B_Naive1 L2
ENSG00000162517 PEF1 -822976 sc-eQTL 8.43e-01 -0.0215 0.108 0.855 B_Naive1 L2
ENSG00000186056 MATN1-AS1 103416 sc-eQTL 3.07e-01 0.0823 0.0804 0.855 B_Naive1 L2
ENSG00000287510 AL137857.1 90227 sc-eQTL 2.87e-01 -0.106 0.0993 0.855 B_Naive1 L2
ENSG00000060688 SNRNP40 -474868 sc-eQTL 8.83e-01 0.0186 0.126 0.856 B_Naive2 L2
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 8.18e-01 -0.024 0.104 0.856 B_Naive2 L2
ENSG00000134644 PUM1 -244071 sc-eQTL 5.01e-01 -0.0686 0.102 0.856 B_Naive2 L2
ENSG00000162510 MATN1 98335 sc-eQTL 4.60e-01 0.0724 0.0978 0.856 B_Naive2 L2
ENSG00000162511 LAPTM5 64146 sc-eQTL 8.84e-01 -0.00975 0.0665 0.856 B_Naive2 L2
ENSG00000162517 PEF1 -822976 sc-eQTL 7.03e-01 0.0462 0.121 0.856 B_Naive2 L2
ENSG00000186056 MATN1-AS1 103416 sc-eQTL 9.48e-01 -0.00633 0.0968 0.856 B_Naive2 L2
ENSG00000287510 AL137857.1 90227 sc-eQTL 1.49e-01 0.151 0.104 0.856 B_Naive2 L2
ENSG00000060688 SNRNP40 -474868 sc-eQTL 1.37e-01 0.193 0.129 0.855 CD4_CTL L2
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 7.58e-01 -0.0395 0.128 0.855 CD4_CTL L2
ENSG00000134644 PUM1 -244071 sc-eQTL 1.15e-01 0.197 0.125 0.855 CD4_CTL L2
ENSG00000162511 LAPTM5 64146 sc-eQTL 1.61e-01 0.156 0.111 0.855 CD4_CTL L2
ENSG00000162517 PEF1 -822976 sc-eQTL 8.12e-02 0.199 0.114 0.855 CD4_CTL L2
ENSG00000186056 MATN1-AS1 103416 sc-eQTL 9.07e-01 0.0143 0.122 0.855 CD4_CTL L2
ENSG00000287510 AL137857.1 90227 sc-eQTL 9.24e-01 -0.0102 0.108 0.855 CD4_CTL L2
ENSG00000060688 SNRNP40 -474868 sc-eQTL 7.26e-01 -0.0343 0.0975 0.855 CD4_Naive L2
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 1.45e-01 0.126 0.086 0.855 CD4_Naive L2
ENSG00000134644 PUM1 -244071 sc-eQTL 1.34e-01 -0.103 0.0687 0.855 CD4_Naive L2
ENSG00000162511 LAPTM5 64146 sc-eQTL 2.06e-01 0.0935 0.0737 0.855 CD4_Naive L2
ENSG00000162517 PEF1 -822976 sc-eQTL 5.60e-01 -0.0473 0.0811 0.855 CD4_Naive L2
ENSG00000186056 MATN1-AS1 103416 sc-eQTL 3.89e-01 -0.0646 0.0749 0.855 CD4_Naive L2
ENSG00000287510 AL137857.1 90227 sc-eQTL 3.62e-01 0.0787 0.0861 0.855 CD4_Naive L2
ENSG00000060688 SNRNP40 -474868 sc-eQTL 9.37e-01 0.00981 0.124 0.855 CD4_TCM L2
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 3.49e-01 -0.0935 0.0996 0.855 CD4_TCM L2
ENSG00000134644 PUM1 -244071 sc-eQTL 7.39e-01 -0.0294 0.0883 0.855 CD4_TCM L2
ENSG00000162511 LAPTM5 64146 sc-eQTL 1.54e-02 0.177 0.0723 0.855 CD4_TCM L2
ENSG00000162517 PEF1 -822976 sc-eQTL 2.26e-01 0.119 0.0979 0.855 CD4_TCM L2
ENSG00000186056 MATN1-AS1 103416 sc-eQTL 8.24e-01 0.0207 0.093 0.855 CD4_TCM L2
ENSG00000287510 AL137857.1 90227 sc-eQTL 9.92e-01 -0.00109 0.104 0.855 CD4_TCM L2
ENSG00000060688 SNRNP40 -474868 sc-eQTL 9.32e-01 -0.0107 0.124 0.855 CD4_TEM L2
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 6.40e-02 0.219 0.118 0.855 CD4_TEM L2
ENSG00000134644 PUM1 -244071 sc-eQTL 6.04e-01 -0.0513 0.0987 0.855 CD4_TEM L2
ENSG00000162511 LAPTM5 64146 sc-eQTL 1.09e-02 0.252 0.0984 0.855 CD4_TEM L2
ENSG00000162517 PEF1 -822976 sc-eQTL 2.24e-01 0.136 0.111 0.855 CD4_TEM L2
ENSG00000186056 MATN1-AS1 103416 sc-eQTL 2.04e-01 0.148 0.116 0.855 CD4_TEM L2
ENSG00000287510 AL137857.1 90227 sc-eQTL 8.68e-01 0.0191 0.115 0.855 CD4_TEM L2
ENSG00000060688 SNRNP40 -474868 sc-eQTL 1.54e-01 0.196 0.137 0.855 CD8_CTL L2
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 1.12e-01 -0.167 0.105 0.855 CD8_CTL L2
ENSG00000134644 PUM1 -244071 sc-eQTL 7.49e-01 0.0328 0.102 0.855 CD8_CTL L2
ENSG00000162511 LAPTM5 64146 sc-eQTL 1.77e-01 0.153 0.113 0.855 CD8_CTL L2
ENSG00000162517 PEF1 -822976 sc-eQTL 1.00e-02 0.253 0.0972 0.855 CD8_CTL L2
ENSG00000186056 MATN1-AS1 103416 sc-eQTL 5.92e-01 0.064 0.119 0.855 CD8_CTL L2
ENSG00000287510 AL137857.1 90227 sc-eQTL 7.10e-01 0.0417 0.112 0.855 CD8_CTL L2
ENSG00000060688 SNRNP40 -474868 sc-eQTL 9.12e-01 0.014 0.127 0.855 CD8_Naive L2
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 5.85e-01 -0.0598 0.109 0.855 CD8_Naive L2
ENSG00000134644 PUM1 -244071 sc-eQTL 1.71e-01 0.12 0.0877 0.855 CD8_Naive L2
ENSG00000162511 LAPTM5 64146 sc-eQTL 3.22e-01 0.0835 0.0842 0.855 CD8_Naive L2
ENSG00000162517 PEF1 -822976 sc-eQTL 8.21e-01 -0.0265 0.117 0.855 CD8_Naive L2
ENSG00000186056 MATN1-AS1 103416 sc-eQTL 1.37e-01 0.157 0.105 0.855 CD8_Naive L2
ENSG00000287510 AL137857.1 90227 sc-eQTL 1.43e-01 -0.168 0.114 0.855 CD8_Naive L2
ENSG00000060688 SNRNP40 -474868 sc-eQTL 9.69e-01 -0.00537 0.14 0.863 CD8_TCM L2
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 4.94e-01 -0.088 0.128 0.863 CD8_TCM L2
ENSG00000134644 PUM1 -244071 sc-eQTL 1.19e-01 -0.188 0.12 0.863 CD8_TCM L2
ENSG00000162511 LAPTM5 64146 sc-eQTL 9.09e-01 -0.0144 0.127 0.863 CD8_TCM L2
ENSG00000162517 PEF1 -822976 sc-eQTL 2.80e-01 -0.14 0.129 0.863 CD8_TCM L2
ENSG00000186056 MATN1-AS1 103416 sc-eQTL 2.40e-01 0.138 0.117 0.863 CD8_TCM L2
ENSG00000287510 AL137857.1 90227 sc-eQTL 5.46e-01 -0.0716 0.118 0.863 CD8_TCM L2
ENSG00000060688 SNRNP40 -474868 sc-eQTL 6.96e-01 0.0526 0.135 0.854 CD8_TEM L2
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 3.93e-01 0.11 0.129 0.854 CD8_TEM L2
ENSG00000134644 PUM1 -244071 sc-eQTL 5.64e-01 -0.0762 0.132 0.854 CD8_TEM L2
ENSG00000162511 LAPTM5 64146 sc-eQTL 6.58e-01 0.055 0.124 0.854 CD8_TEM L2
ENSG00000162517 PEF1 -822976 sc-eQTL 8.30e-01 0.0251 0.117 0.854 CD8_TEM L2
ENSG00000186056 MATN1-AS1 103416 sc-eQTL 7.07e-01 0.0484 0.129 0.854 CD8_TEM L2
ENSG00000287510 AL137857.1 90227 sc-eQTL 8.24e-01 -0.026 0.117 0.854 CD8_TEM L2
ENSG00000060688 SNRNP40 -474868 sc-eQTL 9.83e-01 -0.00286 0.132 0.857 MAIT L2
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 1.68e-01 0.161 0.116 0.857 MAIT L2
ENSG00000134644 PUM1 -244071 sc-eQTL 5.63e-04 0.38 0.109 0.857 MAIT L2
ENSG00000162511 LAPTM5 64146 sc-eQTL 4.46e-01 0.0804 0.105 0.857 MAIT L2
ENSG00000162517 PEF1 -822976 sc-eQTL 7.86e-01 -0.0315 0.116 0.857 MAIT L2
ENSG00000186056 MATN1-AS1 103416 sc-eQTL 4.51e-01 -0.0886 0.117 0.857 MAIT L2
ENSG00000287510 AL137857.1 90227 sc-eQTL 2.23e-01 -0.147 0.121 0.857 MAIT L2
ENSG00000060688 SNRNP40 -474868 sc-eQTL 2.20e-01 -0.168 0.136 0.853 NK_CD56bright L2
ENSG00000121753 ADGRB2 -942973 sc-eQTL 3.13e-01 -0.108 0.107 0.853 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 7.76e-01 0.0329 0.115 0.853 NK_CD56bright L2
ENSG00000134644 PUM1 -244071 sc-eQTL 9.29e-01 0.0108 0.121 0.853 NK_CD56bright L2
ENSG00000162511 LAPTM5 64146 sc-eQTL 1.48e-01 0.173 0.119 0.853 NK_CD56bright L2
ENSG00000162517 PEF1 -822976 sc-eQTL 6.42e-01 -0.0541 0.116 0.853 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 103416 sc-eQTL 4.87e-01 0.0836 0.12 0.853 NK_CD56bright L2
ENSG00000287510 AL137857.1 90227 sc-eQTL 6.70e-01 -0.0505 0.118 0.853 NK_CD56bright L2
ENSG00000060688 SNRNP40 -474868 sc-eQTL 6.29e-01 -0.0611 0.126 0.853 NK_CD56dim L2
ENSG00000121753 ADGRB2 -942973 sc-eQTL 7.16e-01 -0.0404 0.111 0.853 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 7.50e-01 -0.0298 0.0935 0.853 NK_CD56dim L2
ENSG00000134644 PUM1 -244071 sc-eQTL 3.11e-02 -0.206 0.0949 0.853 NK_CD56dim L2
ENSG00000162511 LAPTM5 64146 sc-eQTL 2.63e-02 0.226 0.101 0.853 NK_CD56dim L2
ENSG00000162517 PEF1 -822976 sc-eQTL 7.38e-01 0.0305 0.091 0.853 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 103416 sc-eQTL 5.70e-01 -0.0729 0.128 0.853 NK_CD56dim L2
ENSG00000287510 AL137857.1 90227 sc-eQTL 7.16e-01 -0.0385 0.106 0.853 NK_CD56dim L2
ENSG00000060688 SNRNP40 -474868 sc-eQTL 4.97e-01 -0.0938 0.138 0.854 NK_HLA L2
ENSG00000121753 ADGRB2 -942973 sc-eQTL 5.11e-01 0.0721 0.109 0.854 NK_HLA L2
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 1.75e-01 -0.167 0.123 0.854 NK_HLA L2
ENSG00000134644 PUM1 -244071 sc-eQTL 4.22e-01 -0.0963 0.12 0.854 NK_HLA L2
ENSG00000162511 LAPTM5 64146 sc-eQTL 5.15e-01 -0.0746 0.114 0.854 NK_HLA L2
ENSG00000162517 PEF1 -822976 sc-eQTL 1.01e-01 0.211 0.128 0.854 NK_HLA L2
ENSG00000186056 MATN1-AS1 103416 sc-eQTL 1.47e-01 0.177 0.121 0.854 NK_HLA L2
ENSG00000287510 AL137857.1 90227 sc-eQTL 4.31e-01 -0.0928 0.118 0.854 NK_HLA L2
ENSG00000060688 SNRNP40 -474868 sc-eQTL 5.21e-01 0.0799 0.124 0.853 NK_cytokine L2
ENSG00000121753 ADGRB2 -942973 sc-eQTL 1.97e-01 0.145 0.112 0.853 NK_cytokine L2
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 3.64e-01 -0.0882 0.097 0.853 NK_cytokine L2
ENSG00000134644 PUM1 -244071 sc-eQTL 5.68e-01 -0.0601 0.105 0.853 NK_cytokine L2
ENSG00000162511 LAPTM5 64146 sc-eQTL 3.39e-01 0.111 0.115 0.853 NK_cytokine L2
ENSG00000162517 PEF1 -822976 sc-eQTL 7.50e-01 -0.0314 0.0986 0.853 NK_cytokine L2
ENSG00000186056 MATN1-AS1 103416 sc-eQTL 8.30e-02 0.212 0.122 0.853 NK_cytokine L2
ENSG00000287510 AL137857.1 90227 sc-eQTL 2.14e-01 0.142 0.114 0.853 NK_cytokine L2
ENSG00000060688 SNRNP40 -474868 sc-eQTL 7.51e-01 -0.0449 0.141 0.833 PB L2
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 1.26e-01 -0.249 0.162 0.833 PB L2
ENSG00000134644 PUM1 -244071 sc-eQTL 2.48e-01 0.164 0.141 0.833 PB L2
ENSG00000162510 MATN1 98335 sc-eQTL 4.11e-01 0.109 0.132 0.833 PB L2
ENSG00000162511 LAPTM5 64146 sc-eQTL 1.30e-01 -0.143 0.0936 0.833 PB L2
ENSG00000162517 PEF1 -822976 sc-eQTL 6.22e-01 0.072 0.145 0.833 PB L2
ENSG00000186056 MATN1-AS1 103416 sc-eQTL 5.55e-01 0.0764 0.129 0.833 PB L2
ENSG00000287510 AL137857.1 90227 sc-eQTL 1.09e-01 0.22 0.136 0.833 PB L2
ENSG00000060688 SNRNP40 -474868 sc-eQTL 2.85e-01 0.108 0.101 0.861 Pro_T L2
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 3.42e-01 -0.122 0.129 0.861 Pro_T L2
ENSG00000134644 PUM1 -244071 sc-eQTL 5.62e-01 -0.0698 0.12 0.861 Pro_T L2
ENSG00000162511 LAPTM5 64146 sc-eQTL 4.37e-03 0.244 0.0845 0.861 Pro_T L2
ENSG00000162517 PEF1 -822976 sc-eQTL 6.38e-01 0.0596 0.126 0.861 Pro_T L2
ENSG00000186056 MATN1-AS1 103416 sc-eQTL 6.61e-01 0.0528 0.12 0.861 Pro_T L2
ENSG00000287510 AL137857.1 90227 sc-eQTL 3.18e-01 0.111 0.111 0.861 Pro_T L2
ENSG00000060688 SNRNP40 -474868 sc-eQTL 9.99e-01 0.000213 0.128 0.855 Treg L2
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 7.90e-01 -0.0331 0.124 0.855 Treg L2
ENSG00000134644 PUM1 -244071 sc-eQTL 8.90e-01 -0.0137 0.0992 0.855 Treg L2
ENSG00000162511 LAPTM5 64146 sc-eQTL 4.12e-01 0.0932 0.113 0.855 Treg L2
ENSG00000162517 PEF1 -822976 sc-eQTL 2.93e-01 -0.129 0.122 0.855 Treg L2
ENSG00000186056 MATN1-AS1 103416 sc-eQTL 1.83e-02 0.272 0.114 0.855 Treg L2
ENSG00000287510 AL137857.1 90227 sc-eQTL 1.17e-01 -0.181 0.115 0.855 Treg L2
ENSG00000060688 SNRNP40 -474868 sc-eQTL 6.87e-01 0.0517 0.128 0.856 cDC L2
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 4.88e-01 0.0963 0.139 0.856 cDC L2
ENSG00000134644 PUM1 -244071 sc-eQTL 8.90e-01 -0.0166 0.119 0.856 cDC L2
ENSG00000162511 LAPTM5 64146 sc-eQTL 4.85e-01 -0.0584 0.0834 0.856 cDC L2
ENSG00000162517 PEF1 -822976 sc-eQTL 1.10e-01 0.193 0.12 0.856 cDC L2
ENSG00000168528 SERINC2 -587645 sc-eQTL 4.57e-01 -0.0799 0.107 0.856 cDC L2
ENSG00000284543 LINC01226 -684306 sc-eQTL 8.49e-01 -0.02 0.105 0.856 cDC L2
ENSG00000287510 AL137857.1 90227 sc-eQTL 2.82e-01 -0.122 0.113 0.856 cDC L2
ENSG00000060688 SNRNP40 -474868 sc-eQTL 8.65e-01 0.0174 0.102 0.855 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 1.45e-01 -0.166 0.114 0.855 cMono_IL1B L2
ENSG00000134644 PUM1 -244071 sc-eQTL 2.30e-02 -0.175 0.0764 0.855 cMono_IL1B L2
ENSG00000162511 LAPTM5 64146 sc-eQTL 5.96e-02 -0.128 0.0673 0.855 cMono_IL1B L2
ENSG00000162512 SDC3 -86838 sc-eQTL 6.23e-01 -0.0629 0.128 0.855 cMono_IL1B L2
ENSG00000162517 PEF1 -822976 sc-eQTL 7.86e-01 0.0285 0.105 0.855 cMono_IL1B L2
ENSG00000168528 SERINC2 -587645 sc-eQTL 4.21e-01 0.104 0.129 0.855 cMono_IL1B L2
ENSG00000284543 LINC01226 -684306 sc-eQTL 5.52e-01 0.0681 0.114 0.855 cMono_IL1B L2
ENSG00000287510 AL137857.1 90227 sc-eQTL 2.55e-01 -0.122 0.106 0.855 cMono_IL1B L2
ENSG00000060688 SNRNP40 -474868 sc-eQTL 8.09e-01 0.026 0.107 0.855 cMono_S100A L2
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 3.15e-02 -0.271 0.125 0.855 cMono_S100A L2
ENSG00000134644 PUM1 -244071 sc-eQTL 1.32e-01 -0.137 0.0909 0.855 cMono_S100A L2
ENSG00000162511 LAPTM5 64146 sc-eQTL 4.76e-02 -0.139 0.0696 0.855 cMono_S100A L2
ENSG00000162512 SDC3 -86838 sc-eQTL 6.88e-01 -0.0488 0.121 0.855 cMono_S100A L2
ENSG00000162517 PEF1 -822976 sc-eQTL 8.34e-01 0.0231 0.11 0.855 cMono_S100A L2
ENSG00000168528 SERINC2 -587645 sc-eQTL 3.82e-01 0.113 0.128 0.855 cMono_S100A L2
ENSG00000284543 LINC01226 -684306 sc-eQTL 9.73e-01 -0.00348 0.104 0.855 cMono_S100A L2
ENSG00000287510 AL137857.1 90227 sc-eQTL 7.72e-02 -0.185 0.104 0.855 cMono_S100A L2
ENSG00000060688 SNRNP40 -474868 sc-eQTL 1.21e-01 0.261 0.168 0.87 gdT L2
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 8.97e-01 -0.0189 0.145 0.87 gdT L2
ENSG00000134644 PUM1 -244071 sc-eQTL 1.11e-01 0.238 0.148 0.87 gdT L2
ENSG00000162511 LAPTM5 64146 sc-eQTL 2.69e-01 0.18 0.162 0.87 gdT L2
ENSG00000162517 PEF1 -822976 sc-eQTL 2.70e-01 -0.164 0.148 0.87 gdT L2
ENSG00000186056 MATN1-AS1 103416 sc-eQTL 6.82e-01 0.0617 0.15 0.87 gdT L2
ENSG00000287510 AL137857.1 90227 sc-eQTL 7.54e-01 0.0456 0.145 0.87 gdT L2
ENSG00000060688 SNRNP40 -474868 sc-eQTL 6.79e-01 0.0502 0.121 0.853 intMono L2
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 8.98e-01 0.0167 0.13 0.853 intMono L2
ENSG00000134644 PUM1 -244071 sc-eQTL 2.24e-01 -0.134 0.11 0.853 intMono L2
ENSG00000162511 LAPTM5 64146 sc-eQTL 7.48e-01 0.0278 0.0866 0.853 intMono L2
ENSG00000162512 SDC3 -86838 sc-eQTL 4.27e-01 -0.0942 0.118 0.853 intMono L2
ENSG00000162517 PEF1 -822976 sc-eQTL 2.52e-01 0.143 0.124 0.853 intMono L2
ENSG00000168528 SERINC2 -587645 sc-eQTL 5.52e-01 0.0739 0.124 0.853 intMono L2
ENSG00000284543 LINC01226 -684306 sc-eQTL 3.44e-01 0.111 0.117 0.853 intMono L2
ENSG00000287510 AL137857.1 90227 sc-eQTL 5.45e-01 -0.0712 0.118 0.853 intMono L2
ENSG00000060688 SNRNP40 -474868 sc-eQTL 7.89e-01 0.03 0.112 0.851 ncMono L2
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 3.31e-01 -0.116 0.119 0.851 ncMono L2
ENSG00000134644 PUM1 -244071 sc-eQTL 3.17e-01 -0.0976 0.0974 0.851 ncMono L2
ENSG00000162511 LAPTM5 64146 sc-eQTL 8.07e-01 0.0217 0.0886 0.851 ncMono L2
ENSG00000162512 SDC3 -86838 sc-eQTL 5.76e-01 -0.0557 0.0993 0.851 ncMono L2
ENSG00000162517 PEF1 -822976 sc-eQTL 8.85e-01 0.0165 0.114 0.851 ncMono L2
ENSG00000168528 SERINC2 -587645 sc-eQTL 5.84e-01 0.0595 0.108 0.851 ncMono L2
ENSG00000284543 LINC01226 -684306 sc-eQTL 1.88e-01 0.142 0.108 0.851 ncMono L2
ENSG00000287510 AL137857.1 90227 sc-eQTL 1.79e-01 -0.151 0.112 0.851 ncMono L2
ENSG00000060688 SNRNP40 -474868 sc-eQTL 2.12e-01 0.158 0.126 0.85 pDC L2
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 4.67e-01 0.101 0.139 0.85 pDC L2
ENSG00000134644 PUM1 -244071 sc-eQTL 3.48e-01 -0.108 0.115 0.85 pDC L2
ENSG00000162511 LAPTM5 64146 sc-eQTL 7.80e-01 0.0299 0.107 0.85 pDC L2
ENSG00000162517 PEF1 -822976 sc-eQTL 6.17e-01 0.0696 0.139 0.85 pDC L2
ENSG00000168528 SERINC2 -587645 sc-eQTL 7.48e-01 -0.0417 0.13 0.85 pDC L2
ENSG00000284543 LINC01226 -684306 sc-eQTL 6.68e-02 -0.184 0.0997 0.85 pDC L2
ENSG00000287510 AL137857.1 90227 sc-eQTL 7.52e-01 0.0374 0.119 0.85 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -474868 sc-eQTL 8.71e-01 -0.0208 0.128 0.855 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 3.68e-01 0.0957 0.106 0.855 B_Memory LOneK1K
ENSG00000134644 PUM1 -244071 sc-eQTL 4.96e-01 -0.0641 0.0941 0.855 B_Memory LOneK1K
ENSG00000162510 MATN1 98335 sc-eQTL 4.20e-01 -0.0866 0.107 0.855 B_Memory LOneK1K
ENSG00000162511 LAPTM5 64146 sc-eQTL 9.20e-01 0.0068 0.0675 0.855 B_Memory LOneK1K
ENSG00000162517 PEF1 -822976 sc-eQTL 1.66e-02 -0.266 0.11 0.855 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 103416 sc-eQTL 1.76e-01 0.121 0.0889 0.855 B_Memory LOneK1K
ENSG00000287510 AL137857.1 90227 sc-eQTL 9.00e-01 -0.0123 0.0973 0.855 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -474868 sc-eQTL 8.94e-01 0.0154 0.116 0.855 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 7.84e-01 0.0252 0.0917 0.855 B_Naive LOneK1K
ENSG00000134644 PUM1 -244071 sc-eQTL 7.83e-01 -0.0239 0.0868 0.855 B_Naive LOneK1K
ENSG00000162510 MATN1 98335 sc-eQTL 8.25e-01 0.0185 0.0836 0.855 B_Naive LOneK1K
ENSG00000162511 LAPTM5 64146 sc-eQTL 5.91e-01 -0.0316 0.0588 0.855 B_Naive LOneK1K
ENSG00000162517 PEF1 -822976 sc-eQTL 9.02e-01 -0.0132 0.107 0.855 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 103416 sc-eQTL 7.01e-01 0.0292 0.0759 0.855 B_Naive LOneK1K
ENSG00000287510 AL137857.1 90227 sc-eQTL 9.00e-01 -0.0114 0.0903 0.855 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -474868 sc-eQTL 9.48e-01 -0.00647 0.0986 0.855 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 3.87e-02 -0.23 0.111 0.855 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -244071 sc-eQTL 5.40e-03 -0.197 0.0699 0.855 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 64146 sc-eQTL 1.42e-01 -0.0918 0.0623 0.855 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -86838 sc-eQTL 6.62e-01 -0.0558 0.128 0.855 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -822976 sc-eQTL 6.31e-01 -0.0432 0.0897 0.855 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -587645 sc-eQTL 4.72e-01 0.0946 0.131 0.855 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -684306 sc-eQTL 7.04e-01 0.0409 0.108 0.855 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 90227 sc-eQTL 1.05e-01 -0.163 0.1 0.855 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -474868 sc-eQTL 7.13e-01 0.0393 0.107 0.853 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 2.18e-01 -0.144 0.116 0.853 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -244071 sc-eQTL 2.51e-01 -0.11 0.0954 0.853 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 64146 sc-eQTL 6.66e-01 0.033 0.0765 0.853 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -86838 sc-eQTL 4.51e-01 -0.0843 0.112 0.853 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -822976 sc-eQTL 6.20e-01 -0.0504 0.101 0.853 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -587645 sc-eQTL 2.72e-01 0.127 0.116 0.853 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -684306 sc-eQTL 2.11e-01 0.138 0.11 0.853 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 90227 sc-eQTL 2.63e-01 -0.123 0.11 0.853 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -474868 sc-eQTL 5.92e-01 -0.0644 0.12 0.853 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -942973 sc-eQTL 8.63e-01 0.0177 0.102 0.853 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -475062 sc-eQTL 2.62e-01 -0.0921 0.0819 0.853 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -244071 sc-eQTL 6.39e-02 -0.166 0.0892 0.853 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 64146 sc-eQTL 6.08e-02 0.188 0.0997 0.853 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -822976 sc-eQTL 8.75e-01 0.012 0.0764 0.853 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 103416 sc-eQTL 2.28e-01 0.14 0.116 0.853 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 90227 sc-eQTL 3.31e-01 0.0972 0.0998 0.853 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162510 MATN1 98335 eQTL 0.00599 -0.0707 0.0257 0.0 0.00107 0.17
ENSG00000168528 SERINC2 -587645 eQTL 0.000982 0.167 0.0504 0.0 0.0 0.17

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162510 MATN1 98335 4.59e-06 4.99e-06 7.94e-07 2.95e-06 1.64e-06 1.7e-06 5.13e-06 9.6e-07 5.16e-06 2.41e-06 5.67e-06 3.43e-06 7.56e-06 2.11e-06 1.49e-06 3.36e-06 1.82e-06 3.53e-06 1.61e-06 1.15e-06 2.9e-06 4.97e-06 4.46e-06 1.35e-06 7.3e-06 1.74e-06 2.57e-06 1.85e-06 4.51e-06 4.71e-06 2.85e-06 5.25e-07 5.21e-07 1.52e-06 2.09e-06 1.18e-06 9.55e-07 4.74e-07 9.42e-07 3.71e-07 5.7e-07 5.76e-06 3.82e-07 1.46e-07 4.86e-07 6.75e-07 1.03e-06 4.43e-07 3.91e-07
ENSG00000168528 SERINC2 -587645 3.62e-07 1.83e-07 7.16e-08 2.41e-07 1.03e-07 1.08e-07 2.95e-07 6.75e-08 1.94e-07 1.15e-07 2.18e-07 1.62e-07 3.18e-07 8.66e-08 6.93e-08 1.06e-07 6.63e-08 2.43e-07 8.68e-08 6.58e-08 1.34e-07 2.06e-07 1.81e-07 4.25e-08 2.86e-07 1.56e-07 1.33e-07 1.47e-07 1.48e-07 1.89e-07 1.35e-07 5.32e-08 4.98e-08 9.98e-08 6.98e-08 3.57e-08 5.96e-08 5.71e-08 5.59e-08 6.79e-08 4.68e-08 2e-07 3.53e-08 1.58e-08 4.91e-08 6.98e-09 9.1e-08 0.0 4.74e-08