logo

Genes within 1Mb (chr1:30821033:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -475755 sc-eQTL 8.84e-01 -0.0159 0.109 0.842 B L1
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 8.59e-01 -0.0156 0.0876 0.842 B L1
ENSG00000134644 PUM1 -244958 sc-eQTL 2.77e-01 -0.0798 0.0733 0.842 B L1
ENSG00000162510 MATN1 97448 sc-eQTL 8.91e-01 0.0106 0.0772 0.842 B L1
ENSG00000162511 LAPTM5 63259 sc-eQTL 6.22e-01 -0.0298 0.0605 0.842 B L1
ENSG00000162517 PEF1 -823863 sc-eQTL 1.43e-01 -0.134 0.0908 0.842 B L1
ENSG00000186056 MATN1-AS1 102529 sc-eQTL 1.71e-01 0.0968 0.0706 0.842 B L1
ENSG00000287510 AL137857.1 89340 sc-eQTL 9.36e-01 0.00676 0.0839 0.842 B L1
ENSG00000060688 SNRNP40 -475755 sc-eQTL 7.38e-01 0.0308 0.0921 0.842 CD4T L1
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 3.29e-01 0.0703 0.0718 0.842 CD4T L1
ENSG00000134644 PUM1 -244958 sc-eQTL 3.42e-01 -0.0608 0.0639 0.842 CD4T L1
ENSG00000162511 LAPTM5 63259 sc-eQTL 2.97e-02 0.154 0.0702 0.842 CD4T L1
ENSG00000162517 PEF1 -823863 sc-eQTL 8.85e-01 -0.0107 0.0742 0.842 CD4T L1
ENSG00000186056 MATN1-AS1 102529 sc-eQTL 9.34e-01 0.00526 0.0635 0.842 CD4T L1
ENSG00000287510 AL137857.1 89340 sc-eQTL 6.61e-01 0.0334 0.076 0.842 CD4T L1
ENSG00000060688 SNRNP40 -475755 sc-eQTL 5.20e-01 0.08 0.124 0.842 CD8T L1
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 7.90e-01 -0.0221 0.0827 0.842 CD8T L1
ENSG00000134644 PUM1 -244958 sc-eQTL 2.69e-01 0.0804 0.0726 0.842 CD8T L1
ENSG00000162511 LAPTM5 63259 sc-eQTL 1.01e-02 0.181 0.0696 0.842 CD8T L1
ENSG00000162517 PEF1 -823863 sc-eQTL 7.40e-01 -0.029 0.0871 0.842 CD8T L1
ENSG00000186056 MATN1-AS1 102529 sc-eQTL 1.55e-01 0.118 0.0825 0.842 CD8T L1
ENSG00000287510 AL137857.1 89340 sc-eQTL 5.17e-01 -0.0676 0.104 0.842 CD8T L1
ENSG00000060688 SNRNP40 -475755 sc-eQTL 2.91e-01 0.118 0.112 0.845 DC L1
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 3.23e-01 0.131 0.133 0.845 DC L1
ENSG00000134644 PUM1 -244958 sc-eQTL 6.52e-01 -0.047 0.104 0.845 DC L1
ENSG00000162511 LAPTM5 63259 sc-eQTL 1.87e-01 -0.0979 0.074 0.845 DC L1
ENSG00000162517 PEF1 -823863 sc-eQTL 3.70e-01 0.108 0.12 0.845 DC L1
ENSG00000168528 SERINC2 -588532 sc-eQTL 8.29e-01 -0.0265 0.123 0.845 DC L1
ENSG00000284543 LINC01226 -685193 sc-eQTL 3.79e-01 -0.0714 0.081 0.845 DC L1
ENSG00000287510 AL137857.1 89340 sc-eQTL 8.16e-01 -0.0273 0.118 0.845 DC L1
ENSG00000060688 SNRNP40 -475755 sc-eQTL 7.70e-01 0.0249 0.0849 0.842 Mono L1
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 9.13e-02 -0.177 0.105 0.842 Mono L1
ENSG00000134644 PUM1 -244958 sc-eQTL 2.95e-03 -0.199 0.0661 0.842 Mono L1
ENSG00000162511 LAPTM5 63259 sc-eQTL 6.06e-02 -0.116 0.0616 0.842 Mono L1
ENSG00000162512 SDC3 -87725 sc-eQTL 4.33e-01 -0.0936 0.119 0.842 Mono L1
ENSG00000162517 PEF1 -823863 sc-eQTL 3.92e-01 -0.0717 0.0836 0.842 Mono L1
ENSG00000168528 SERINC2 -588532 sc-eQTL 2.36e-01 0.152 0.128 0.842 Mono L1
ENSG00000284543 LINC01226 -685193 sc-eQTL 6.60e-01 0.0496 0.113 0.842 Mono L1
ENSG00000287510 AL137857.1 89340 sc-eQTL 2.39e-02 -0.222 0.0974 0.842 Mono L1
ENSG00000060688 SNRNP40 -475755 sc-eQTL 2.61e-01 -0.133 0.118 0.841 NK L1
ENSG00000121753 ADGRB2 -943860 sc-eQTL 9.53e-01 -0.00598 0.102 0.841 NK L1
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 4.62e-01 -0.0597 0.081 0.841 NK L1
ENSG00000134644 PUM1 -244958 sc-eQTL 3.41e-02 -0.18 0.0842 0.841 NK L1
ENSG00000162511 LAPTM5 63259 sc-eQTL 5.28e-02 0.189 0.0971 0.841 NK L1
ENSG00000162517 PEF1 -823863 sc-eQTL 8.14e-01 0.0169 0.0715 0.841 NK L1
ENSG00000186056 MATN1-AS1 102529 sc-eQTL 1.42e-01 0.161 0.11 0.841 NK L1
ENSG00000287510 AL137857.1 89340 sc-eQTL 7.05e-01 0.0385 0.102 0.841 NK L1
ENSG00000060688 SNRNP40 -475755 sc-eQTL 1.17e-01 0.143 0.0906 0.842 Other_T L1
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 6.40e-01 0.0456 0.0974 0.842 Other_T L1
ENSG00000134644 PUM1 -244958 sc-eQTL 8.52e-03 0.229 0.0862 0.842 Other_T L1
ENSG00000162511 LAPTM5 63259 sc-eQTL 1.25e-01 0.11 0.0714 0.842 Other_T L1
ENSG00000162517 PEF1 -823863 sc-eQTL 2.29e-01 -0.115 0.0955 0.842 Other_T L1
ENSG00000186056 MATN1-AS1 102529 sc-eQTL 4.64e-01 -0.086 0.117 0.842 Other_T L1
ENSG00000287510 AL137857.1 89340 sc-eQTL 8.94e-01 -0.0164 0.122 0.842 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -475755 sc-eQTL 1.76e-01 0.192 0.141 0.842 B_Activated L2
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 3.73e-01 0.128 0.143 0.842 B_Activated L2
ENSG00000134644 PUM1 -244958 sc-eQTL 1.93e-01 -0.173 0.132 0.842 B_Activated L2
ENSG00000162510 MATN1 97448 sc-eQTL 9.74e-01 -0.00382 0.116 0.842 B_Activated L2
ENSG00000162511 LAPTM5 63259 sc-eQTL 4.21e-01 -0.0653 0.0809 0.842 B_Activated L2
ENSG00000162517 PEF1 -823863 sc-eQTL 8.56e-01 0.0251 0.138 0.842 B_Activated L2
ENSG00000186056 MATN1-AS1 102529 sc-eQTL 4.01e-01 -0.11 0.131 0.842 B_Activated L2
ENSG00000287510 AL137857.1 89340 sc-eQTL 3.53e-01 -0.108 0.116 0.842 B_Activated L2
ENSG00000060688 SNRNP40 -475755 sc-eQTL 8.96e-01 -0.0173 0.132 0.841 B_Intermediate L2
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 7.01e-01 0.0423 0.11 0.841 B_Intermediate L2
ENSG00000134644 PUM1 -244958 sc-eQTL 4.57e-01 -0.0773 0.104 0.841 B_Intermediate L2
ENSG00000162510 MATN1 97448 sc-eQTL 2.78e-01 -0.117 0.108 0.841 B_Intermediate L2
ENSG00000162511 LAPTM5 63259 sc-eQTL 7.60e-01 0.0203 0.0663 0.841 B_Intermediate L2
ENSG00000162517 PEF1 -823863 sc-eQTL 6.06e-02 -0.23 0.122 0.841 B_Intermediate L2
ENSG00000186056 MATN1-AS1 102529 sc-eQTL 3.86e-02 0.192 0.0922 0.841 B_Intermediate L2
ENSG00000287510 AL137857.1 89340 sc-eQTL 6.19e-01 0.0518 0.104 0.841 B_Intermediate L2
ENSG00000060688 SNRNP40 -475755 sc-eQTL 9.88e-01 -0.00194 0.129 0.845 B_Memory L2
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 8.70e-01 -0.0195 0.119 0.845 B_Memory L2
ENSG00000134644 PUM1 -244958 sc-eQTL 4.29e-01 -0.0819 0.103 0.845 B_Memory L2
ENSG00000162510 MATN1 97448 sc-eQTL 3.97e-01 -0.0839 0.0989 0.845 B_Memory L2
ENSG00000162511 LAPTM5 63259 sc-eQTL 4.68e-01 0.0637 0.0877 0.845 B_Memory L2
ENSG00000162517 PEF1 -823863 sc-eQTL 1.68e-01 -0.161 0.117 0.845 B_Memory L2
ENSG00000186056 MATN1-AS1 102529 sc-eQTL 7.04e-02 -0.181 0.0997 0.845 B_Memory L2
ENSG00000287510 AL137857.1 89340 sc-eQTL 2.94e-01 -0.123 0.117 0.845 B_Memory L2
ENSG00000060688 SNRNP40 -475755 sc-eQTL 7.80e-01 0.0326 0.117 0.842 B_Naive1 L2
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 4.84e-01 0.0708 0.101 0.842 B_Naive1 L2
ENSG00000134644 PUM1 -244958 sc-eQTL 9.85e-01 -0.00165 0.089 0.842 B_Naive1 L2
ENSG00000162510 MATN1 97448 sc-eQTL 7.12e-01 0.0333 0.0903 0.842 B_Naive1 L2
ENSG00000162511 LAPTM5 63259 sc-eQTL 6.01e-01 -0.0316 0.0603 0.842 B_Naive1 L2
ENSG00000162517 PEF1 -823863 sc-eQTL 9.14e-01 0.0115 0.106 0.842 B_Naive1 L2
ENSG00000186056 MATN1-AS1 102529 sc-eQTL 2.12e-01 0.0989 0.079 0.842 B_Naive1 L2
ENSG00000287510 AL137857.1 89340 sc-eQTL 1.79e-01 -0.132 0.0975 0.842 B_Naive1 L2
ENSG00000060688 SNRNP40 -475755 sc-eQTL 5.32e-01 0.0776 0.124 0.843 B_Naive2 L2
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 5.08e-01 -0.0678 0.102 0.843 B_Naive2 L2
ENSG00000134644 PUM1 -244958 sc-eQTL 3.86e-01 -0.0869 0.1 0.843 B_Naive2 L2
ENSG00000162510 MATN1 97448 sc-eQTL 3.03e-01 0.0989 0.0959 0.843 B_Naive2 L2
ENSG00000162511 LAPTM5 63259 sc-eQTL 7.66e-01 -0.0194 0.0653 0.843 B_Naive2 L2
ENSG00000162517 PEF1 -823863 sc-eQTL 5.73e-01 0.0669 0.119 0.843 B_Naive2 L2
ENSG00000186056 MATN1-AS1 102529 sc-eQTL 8.32e-01 0.0202 0.095 0.843 B_Naive2 L2
ENSG00000287510 AL137857.1 89340 sc-eQTL 1.18e-01 0.16 0.102 0.843 B_Naive2 L2
ENSG00000060688 SNRNP40 -475755 sc-eQTL 2.43e-01 0.149 0.127 0.841 CD4_CTL L2
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 8.64e-01 0.0215 0.126 0.841 CD4_CTL L2
ENSG00000134644 PUM1 -244958 sc-eQTL 1.50e-01 0.177 0.123 0.841 CD4_CTL L2
ENSG00000162511 LAPTM5 63259 sc-eQTL 1.14e-01 0.173 0.109 0.841 CD4_CTL L2
ENSG00000162517 PEF1 -823863 sc-eQTL 1.58e-02 0.27 0.111 0.841 CD4_CTL L2
ENSG00000186056 MATN1-AS1 102529 sc-eQTL 7.52e-01 0.038 0.12 0.841 CD4_CTL L2
ENSG00000287510 AL137857.1 89340 sc-eQTL 9.22e-01 -0.0104 0.106 0.841 CD4_CTL L2
ENSG00000060688 SNRNP40 -475755 sc-eQTL 9.88e-01 -0.00145 0.096 0.842 CD4_Naive L2
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 1.90e-01 0.112 0.0847 0.842 CD4_Naive L2
ENSG00000134644 PUM1 -244958 sc-eQTL 1.04e-01 -0.11 0.0675 0.842 CD4_Naive L2
ENSG00000162511 LAPTM5 63259 sc-eQTL 2.04e-01 0.0924 0.0725 0.842 CD4_Naive L2
ENSG00000162517 PEF1 -823863 sc-eQTL 3.25e-01 -0.0785 0.0797 0.842 CD4_Naive L2
ENSG00000186056 MATN1-AS1 102529 sc-eQTL 3.97e-01 -0.0626 0.0737 0.842 CD4_Naive L2
ENSG00000287510 AL137857.1 89340 sc-eQTL 3.46e-01 0.0799 0.0847 0.842 CD4_Naive L2
ENSG00000060688 SNRNP40 -475755 sc-eQTL 8.36e-01 0.0252 0.122 0.842 CD4_TCM L2
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 2.93e-01 -0.103 0.098 0.842 CD4_TCM L2
ENSG00000134644 PUM1 -244958 sc-eQTL 9.08e-01 -0.01 0.0869 0.842 CD4_TCM L2
ENSG00000162511 LAPTM5 63259 sc-eQTL 4.42e-03 0.204 0.0708 0.842 CD4_TCM L2
ENSG00000162517 PEF1 -823863 sc-eQTL 2.29e-01 0.116 0.0963 0.842 CD4_TCM L2
ENSG00000186056 MATN1-AS1 102529 sc-eQTL 6.36e-01 0.0434 0.0915 0.842 CD4_TCM L2
ENSG00000287510 AL137857.1 89340 sc-eQTL 6.47e-01 -0.0468 0.102 0.842 CD4_TCM L2
ENSG00000060688 SNRNP40 -475755 sc-eQTL 7.92e-01 0.0323 0.122 0.842 CD4_TEM L2
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 6.53e-02 0.214 0.116 0.842 CD4_TEM L2
ENSG00000134644 PUM1 -244958 sc-eQTL 6.12e-01 -0.0492 0.097 0.842 CD4_TEM L2
ENSG00000162511 LAPTM5 63259 sc-eQTL 3.93e-03 0.281 0.0962 0.842 CD4_TEM L2
ENSG00000162517 PEF1 -823863 sc-eQTL 2.44e-01 0.128 0.11 0.842 CD4_TEM L2
ENSG00000186056 MATN1-AS1 102529 sc-eQTL 3.36e-01 0.11 0.115 0.842 CD4_TEM L2
ENSG00000287510 AL137857.1 89340 sc-eQTL 7.76e-01 0.0322 0.113 0.842 CD4_TEM L2
ENSG00000060688 SNRNP40 -475755 sc-eQTL 7.15e-02 0.245 0.135 0.842 CD8_CTL L2
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 3.42e-01 -0.0991 0.104 0.842 CD8_CTL L2
ENSG00000134644 PUM1 -244958 sc-eQTL 8.00e-01 0.0256 0.101 0.842 CD8_CTL L2
ENSG00000162511 LAPTM5 63259 sc-eQTL 2.83e-01 0.12 0.112 0.842 CD8_CTL L2
ENSG00000162517 PEF1 -823863 sc-eQTL 9.61e-03 0.251 0.0961 0.842 CD8_CTL L2
ENSG00000186056 MATN1-AS1 102529 sc-eQTL 5.69e-01 0.0673 0.118 0.842 CD8_CTL L2
ENSG00000287510 AL137857.1 89340 sc-eQTL 9.31e-01 -0.00961 0.111 0.842 CD8_CTL L2
ENSG00000060688 SNRNP40 -475755 sc-eQTL 7.80e-01 0.0348 0.124 0.842 CD8_Naive L2
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 4.95e-01 -0.0733 0.107 0.842 CD8_Naive L2
ENSG00000134644 PUM1 -244958 sc-eQTL 2.31e-01 0.103 0.0861 0.842 CD8_Naive L2
ENSG00000162511 LAPTM5 63259 sc-eQTL 2.83e-01 0.0888 0.0825 0.842 CD8_Naive L2
ENSG00000162517 PEF1 -823863 sc-eQTL 6.60e-01 -0.0507 0.115 0.842 CD8_Naive L2
ENSG00000186056 MATN1-AS1 102529 sc-eQTL 7.62e-02 0.183 0.103 0.842 CD8_Naive L2
ENSG00000287510 AL137857.1 89340 sc-eQTL 2.94e-01 -0.118 0.112 0.842 CD8_Naive L2
ENSG00000060688 SNRNP40 -475755 sc-eQTL 9.36e-01 0.0112 0.138 0.85 CD8_TCM L2
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 6.11e-01 -0.0642 0.126 0.85 CD8_TCM L2
ENSG00000134644 PUM1 -244958 sc-eQTL 3.44e-01 -0.112 0.118 0.85 CD8_TCM L2
ENSG00000162511 LAPTM5 63259 sc-eQTL 8.00e-01 0.0315 0.124 0.85 CD8_TCM L2
ENSG00000162517 PEF1 -823863 sc-eQTL 1.94e-01 -0.165 0.126 0.85 CD8_TCM L2
ENSG00000186056 MATN1-AS1 102529 sc-eQTL 3.59e-01 0.105 0.115 0.85 CD8_TCM L2
ENSG00000287510 AL137857.1 89340 sc-eQTL 6.70e-01 -0.0495 0.116 0.85 CD8_TCM L2
ENSG00000060688 SNRNP40 -475755 sc-eQTL 5.59e-01 0.0777 0.133 0.84 CD8_TEM L2
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 3.34e-01 0.123 0.127 0.84 CD8_TEM L2
ENSG00000134644 PUM1 -244958 sc-eQTL 4.75e-01 -0.0929 0.13 0.84 CD8_TEM L2
ENSG00000162511 LAPTM5 63259 sc-eQTL 4.69e-01 0.0886 0.122 0.84 CD8_TEM L2
ENSG00000162517 PEF1 -823863 sc-eQTL 8.17e-01 -0.0266 0.115 0.84 CD8_TEM L2
ENSG00000186056 MATN1-AS1 102529 sc-eQTL 9.36e-01 0.0102 0.127 0.84 CD8_TEM L2
ENSG00000287510 AL137857.1 89340 sc-eQTL 5.37e-01 -0.071 0.115 0.84 CD8_TEM L2
ENSG00000060688 SNRNP40 -475755 sc-eQTL 8.45e-01 0.0254 0.129 0.844 MAIT L2
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 1.67e-01 0.158 0.114 0.844 MAIT L2
ENSG00000134644 PUM1 -244958 sc-eQTL 4.34e-04 0.381 0.107 0.844 MAIT L2
ENSG00000162511 LAPTM5 63259 sc-eQTL 4.16e-01 0.0843 0.103 0.844 MAIT L2
ENSG00000162517 PEF1 -823863 sc-eQTL 4.05e-01 -0.0948 0.114 0.844 MAIT L2
ENSG00000186056 MATN1-AS1 102529 sc-eQTL 4.33e-01 -0.0906 0.115 0.844 MAIT L2
ENSG00000287510 AL137857.1 89340 sc-eQTL 4.34e-01 -0.0931 0.119 0.844 MAIT L2
ENSG00000060688 SNRNP40 -475755 sc-eQTL 4.72e-01 -0.0971 0.135 0.84 NK_CD56bright L2
ENSG00000121753 ADGRB2 -943860 sc-eQTL 2.79e-01 -0.114 0.105 0.84 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 6.35e-01 0.0543 0.114 0.84 NK_CD56bright L2
ENSG00000134644 PUM1 -244958 sc-eQTL 6.90e-01 -0.0479 0.12 0.84 NK_CD56bright L2
ENSG00000162511 LAPTM5 63259 sc-eQTL 1.75e-01 0.16 0.118 0.84 NK_CD56bright L2
ENSG00000162517 PEF1 -823863 sc-eQTL 7.12e-01 -0.0425 0.115 0.84 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 102529 sc-eQTL 9.06e-01 0.014 0.119 0.84 NK_CD56bright L2
ENSG00000287510 AL137857.1 89340 sc-eQTL 8.11e-01 -0.0281 0.117 0.84 NK_CD56bright L2
ENSG00000060688 SNRNP40 -475755 sc-eQTL 5.38e-01 -0.077 0.125 0.841 NK_CD56dim L2
ENSG00000121753 ADGRB2 -943860 sc-eQTL 6.98e-01 -0.0427 0.11 0.841 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 7.47e-01 -0.0299 0.0924 0.841 NK_CD56dim L2
ENSG00000134644 PUM1 -244958 sc-eQTL 1.55e-02 -0.228 0.0935 0.841 NK_CD56dim L2
ENSG00000162511 LAPTM5 63259 sc-eQTL 2.56e-02 0.225 0.0999 0.841 NK_CD56dim L2
ENSG00000162517 PEF1 -823863 sc-eQTL 7.70e-01 0.0263 0.0899 0.841 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 102529 sc-eQTL 8.75e-01 -0.0199 0.127 0.841 NK_CD56dim L2
ENSG00000287510 AL137857.1 89340 sc-eQTL 3.73e-01 -0.0931 0.104 0.841 NK_CD56dim L2
ENSG00000060688 SNRNP40 -475755 sc-eQTL 3.54e-01 -0.127 0.137 0.842 NK_HLA L2
ENSG00000121753 ADGRB2 -943860 sc-eQTL 4.37e-01 0.0848 0.109 0.842 NK_HLA L2
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 5.19e-01 -0.0791 0.122 0.842 NK_HLA L2
ENSG00000134644 PUM1 -244958 sc-eQTL 4.51e-01 -0.0901 0.119 0.842 NK_HLA L2
ENSG00000162511 LAPTM5 63259 sc-eQTL 6.59e-01 -0.0503 0.114 0.842 NK_HLA L2
ENSG00000162517 PEF1 -823863 sc-eQTL 1.87e-01 0.17 0.128 0.842 NK_HLA L2
ENSG00000186056 MATN1-AS1 102529 sc-eQTL 7.52e-02 0.215 0.12 0.842 NK_HLA L2
ENSG00000287510 AL137857.1 89340 sc-eQTL 4.35e-01 -0.0916 0.117 0.842 NK_HLA L2
ENSG00000060688 SNRNP40 -475755 sc-eQTL 8.88e-01 0.0173 0.123 0.841 NK_cytokine L2
ENSG00000121753 ADGRB2 -943860 sc-eQTL 1.06e-01 0.18 0.111 0.841 NK_cytokine L2
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 5.97e-01 -0.0509 0.0961 0.841 NK_cytokine L2
ENSG00000134644 PUM1 -244958 sc-eQTL 4.45e-01 -0.0795 0.104 0.841 NK_cytokine L2
ENSG00000162511 LAPTM5 63259 sc-eQTL 4.20e-01 0.0925 0.114 0.841 NK_cytokine L2
ENSG00000162517 PEF1 -823863 sc-eQTL 8.65e-01 -0.0167 0.0976 0.841 NK_cytokine L2
ENSG00000186056 MATN1-AS1 102529 sc-eQTL 1.54e-01 0.173 0.121 0.841 NK_cytokine L2
ENSG00000287510 AL137857.1 89340 sc-eQTL 2.34e-01 0.134 0.113 0.841 NK_cytokine L2
ENSG00000060688 SNRNP40 -475755 sc-eQTL 3.82e-01 -0.123 0.14 0.822 PB L2
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 2.16e-01 -0.201 0.162 0.822 PB L2
ENSG00000134644 PUM1 -244958 sc-eQTL 8.62e-02 0.242 0.14 0.822 PB L2
ENSG00000162510 MATN1 97448 sc-eQTL 4.57e-01 0.0983 0.132 0.822 PB L2
ENSG00000162511 LAPTM5 63259 sc-eQTL 6.96e-02 -0.17 0.0928 0.822 PB L2
ENSG00000162517 PEF1 -823863 sc-eQTL 5.49e-01 0.087 0.145 0.822 PB L2
ENSG00000186056 MATN1-AS1 102529 sc-eQTL 6.32e-01 0.0619 0.129 0.822 PB L2
ENSG00000287510 AL137857.1 89340 sc-eQTL 8.81e-02 0.233 0.135 0.822 PB L2
ENSG00000060688 SNRNP40 -475755 sc-eQTL 2.60e-01 0.113 0.1 0.848 Pro_T L2
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 2.86e-01 -0.136 0.127 0.848 Pro_T L2
ENSG00000134644 PUM1 -244958 sc-eQTL 6.67e-01 -0.0513 0.119 0.848 Pro_T L2
ENSG00000162511 LAPTM5 63259 sc-eQTL 3.40e-03 0.247 0.0835 0.848 Pro_T L2
ENSG00000162517 PEF1 -823863 sc-eQTL 6.16e-01 0.0628 0.125 0.848 Pro_T L2
ENSG00000186056 MATN1-AS1 102529 sc-eQTL 7.86e-01 0.0324 0.119 0.848 Pro_T L2
ENSG00000287510 AL137857.1 89340 sc-eQTL 5.51e-01 0.0654 0.109 0.848 Pro_T L2
ENSG00000060688 SNRNP40 -475755 sc-eQTL 6.78e-01 -0.0524 0.126 0.842 Treg L2
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 6.12e-01 0.0617 0.122 0.842 Treg L2
ENSG00000134644 PUM1 -244958 sc-eQTL 6.40e-01 -0.0456 0.0974 0.842 Treg L2
ENSG00000162511 LAPTM5 63259 sc-eQTL 1.81e-01 0.149 0.111 0.842 Treg L2
ENSG00000162517 PEF1 -823863 sc-eQTL 1.88e-01 -0.159 0.12 0.842 Treg L2
ENSG00000186056 MATN1-AS1 102529 sc-eQTL 2.27e-02 0.258 0.112 0.842 Treg L2
ENSG00000287510 AL137857.1 89340 sc-eQTL 1.47e-01 -0.165 0.113 0.842 Treg L2
ENSG00000060688 SNRNP40 -475755 sc-eQTL 5.52e-01 0.0753 0.126 0.844 cDC L2
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 8.94e-01 0.0183 0.137 0.844 cDC L2
ENSG00000134644 PUM1 -244958 sc-eQTL 8.71e-01 -0.0192 0.118 0.844 cDC L2
ENSG00000162511 LAPTM5 63259 sc-eQTL 2.51e-01 -0.0946 0.0821 0.844 cDC L2
ENSG00000162517 PEF1 -823863 sc-eQTL 1.36e-01 0.178 0.119 0.844 cDC L2
ENSG00000168528 SERINC2 -588532 sc-eQTL 6.02e-01 -0.0553 0.106 0.844 cDC L2
ENSG00000284543 LINC01226 -685193 sc-eQTL 5.28e-01 -0.0657 0.104 0.844 cDC L2
ENSG00000287510 AL137857.1 89340 sc-eQTL 4.62e-01 -0.0824 0.112 0.844 cDC L2
ENSG00000060688 SNRNP40 -475755 sc-eQTL 8.52e-01 0.0188 0.101 0.842 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 1.49e-01 -0.162 0.112 0.842 cMono_IL1B L2
ENSG00000134644 PUM1 -244958 sc-eQTL 6.65e-03 -0.205 0.0746 0.842 cMono_IL1B L2
ENSG00000162511 LAPTM5 63259 sc-eQTL 1.42e-02 -0.163 0.0657 0.842 cMono_IL1B L2
ENSG00000162512 SDC3 -87725 sc-eQTL 4.44e-01 -0.0963 0.125 0.842 cMono_IL1B L2
ENSG00000162517 PEF1 -823863 sc-eQTL 7.78e-01 -0.0289 0.103 0.842 cMono_IL1B L2
ENSG00000168528 SERINC2 -588532 sc-eQTL 2.50e-01 0.146 0.127 0.842 cMono_IL1B L2
ENSG00000284543 LINC01226 -685193 sc-eQTL 7.09e-01 0.042 0.112 0.842 cMono_IL1B L2
ENSG00000287510 AL137857.1 89340 sc-eQTL 1.40e-01 -0.154 0.104 0.842 cMono_IL1B L2
ENSG00000060688 SNRNP40 -475755 sc-eQTL 9.00e-01 0.0132 0.105 0.842 cMono_S100A L2
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 2.51e-02 -0.277 0.123 0.842 cMono_S100A L2
ENSG00000134644 PUM1 -244958 sc-eQTL 8.31e-02 -0.155 0.0891 0.842 cMono_S100A L2
ENSG00000162511 LAPTM5 63259 sc-eQTL 1.13e-02 -0.174 0.0679 0.842 cMono_S100A L2
ENSG00000162512 SDC3 -87725 sc-eQTL 9.99e-01 -0.000164 0.119 0.842 cMono_S100A L2
ENSG00000162517 PEF1 -823863 sc-eQTL 5.01e-01 0.0724 0.107 0.842 cMono_S100A L2
ENSG00000168528 SERINC2 -588532 sc-eQTL 3.01e-01 0.13 0.126 0.842 cMono_S100A L2
ENSG00000284543 LINC01226 -685193 sc-eQTL 9.69e-01 -0.00404 0.102 0.842 cMono_S100A L2
ENSG00000287510 AL137857.1 89340 sc-eQTL 8.51e-02 -0.177 0.102 0.842 cMono_S100A L2
ENSG00000060688 SNRNP40 -475755 sc-eQTL 6.92e-02 0.299 0.164 0.858 gdT L2
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 9.33e-01 -0.012 0.142 0.858 gdT L2
ENSG00000134644 PUM1 -244958 sc-eQTL 1.06e-01 0.236 0.145 0.858 gdT L2
ENSG00000162511 LAPTM5 63259 sc-eQTL 3.10e-01 0.162 0.159 0.858 gdT L2
ENSG00000162517 PEF1 -823863 sc-eQTL 2.88e-01 -0.155 0.145 0.858 gdT L2
ENSG00000186056 MATN1-AS1 102529 sc-eQTL 7.45e-01 0.0479 0.147 0.858 gdT L2
ENSG00000287510 AL137857.1 89340 sc-eQTL 7.17e-01 0.0517 0.142 0.858 gdT L2
ENSG00000060688 SNRNP40 -475755 sc-eQTL 4.41e-01 0.0916 0.119 0.84 intMono L2
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 6.97e-01 0.0498 0.128 0.84 intMono L2
ENSG00000134644 PUM1 -244958 sc-eQTL 1.08e-01 -0.174 0.108 0.84 intMono L2
ENSG00000162511 LAPTM5 63259 sc-eQTL 8.53e-01 -0.0158 0.085 0.84 intMono L2
ENSG00000162512 SDC3 -87725 sc-eQTL 3.55e-01 -0.108 0.116 0.84 intMono L2
ENSG00000162517 PEF1 -823863 sc-eQTL 9.05e-02 0.206 0.121 0.84 intMono L2
ENSG00000168528 SERINC2 -588532 sc-eQTL 2.24e-01 0.148 0.121 0.84 intMono L2
ENSG00000284543 LINC01226 -685193 sc-eQTL 6.21e-01 0.0572 0.115 0.84 intMono L2
ENSG00000287510 AL137857.1 89340 sc-eQTL 3.38e-01 -0.111 0.115 0.84 intMono L2
ENSG00000060688 SNRNP40 -475755 sc-eQTL 9.91e-01 -0.00126 0.11 0.837 ncMono L2
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 7.19e-01 -0.0423 0.117 0.837 ncMono L2
ENSG00000134644 PUM1 -244958 sc-eQTL 2.23e-01 -0.117 0.0955 0.837 ncMono L2
ENSG00000162511 LAPTM5 63259 sc-eQTL 8.65e-01 0.0148 0.087 0.837 ncMono L2
ENSG00000162512 SDC3 -87725 sc-eQTL 9.25e-01 -0.00921 0.0976 0.837 ncMono L2
ENSG00000162517 PEF1 -823863 sc-eQTL 8.96e-01 -0.0147 0.112 0.837 ncMono L2
ENSG00000168528 SERINC2 -588532 sc-eQTL 5.46e-01 0.0643 0.106 0.837 ncMono L2
ENSG00000284543 LINC01226 -685193 sc-eQTL 2.44e-01 0.124 0.106 0.837 ncMono L2
ENSG00000287510 AL137857.1 89340 sc-eQTL 2.18e-01 -0.136 0.11 0.837 ncMono L2
ENSG00000060688 SNRNP40 -475755 sc-eQTL 1.73e-01 0.171 0.125 0.836 pDC L2
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 4.56e-01 0.103 0.138 0.836 pDC L2
ENSG00000134644 PUM1 -244958 sc-eQTL 4.11e-01 -0.0942 0.114 0.836 pDC L2
ENSG00000162511 LAPTM5 63259 sc-eQTL 9.14e-01 0.0116 0.107 0.836 pDC L2
ENSG00000162517 PEF1 -823863 sc-eQTL 5.29e-01 0.087 0.138 0.836 pDC L2
ENSG00000168528 SERINC2 -588532 sc-eQTL 9.18e-01 -0.0133 0.129 0.836 pDC L2
ENSG00000284543 LINC01226 -685193 sc-eQTL 9.43e-02 -0.167 0.0994 0.836 pDC L2
ENSG00000287510 AL137857.1 89340 sc-eQTL 6.89e-01 0.0473 0.118 0.836 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -475755 sc-eQTL 9.73e-01 -0.00431 0.125 0.842 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 5.58e-01 0.061 0.104 0.842 B_Memory LOneK1K
ENSG00000134644 PUM1 -244958 sc-eQTL 1.95e-01 -0.119 0.0917 0.842 B_Memory LOneK1K
ENSG00000162510 MATN1 97448 sc-eQTL 2.79e-01 -0.114 0.105 0.842 B_Memory LOneK1K
ENSG00000162511 LAPTM5 63259 sc-eQTL 9.33e-01 0.00553 0.0659 0.842 B_Memory LOneK1K
ENSG00000162517 PEF1 -823863 sc-eQTL 2.11e-02 -0.251 0.108 0.842 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 102529 sc-eQTL 2.56e-01 0.099 0.087 0.842 B_Memory LOneK1K
ENSG00000287510 AL137857.1 89340 sc-eQTL 8.20e-01 -0.0217 0.0951 0.842 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -475755 sc-eQTL 8.04e-01 0.0284 0.114 0.842 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 9.79e-01 0.00242 0.0902 0.842 B_Naive LOneK1K
ENSG00000134644 PUM1 -244958 sc-eQTL 6.54e-01 -0.0382 0.0853 0.842 B_Naive LOneK1K
ENSG00000162510 MATN1 97448 sc-eQTL 6.45e-01 0.0379 0.0821 0.842 B_Naive LOneK1K
ENSG00000162511 LAPTM5 63259 sc-eQTL 5.20e-01 -0.0372 0.0578 0.842 B_Naive LOneK1K
ENSG00000162517 PEF1 -823863 sc-eQTL 8.18e-01 0.0243 0.106 0.842 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 102529 sc-eQTL 4.13e-01 0.0611 0.0745 0.842 B_Naive LOneK1K
ENSG00000287510 AL137857.1 89340 sc-eQTL 8.81e-01 -0.0133 0.0887 0.842 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -475755 sc-eQTL 9.18e-01 -0.01 0.0969 0.842 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 3.80e-02 -0.227 0.109 0.842 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -244958 sc-eQTL 1.05e-03 -0.227 0.0682 0.842 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 63259 sc-eQTL 2.87e-02 -0.134 0.0608 0.842 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -87725 sc-eQTL 6.83e-01 -0.0513 0.125 0.842 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -823863 sc-eQTL 5.61e-01 -0.0514 0.0882 0.842 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -588532 sc-eQTL 3.28e-01 0.126 0.129 0.842 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -685193 sc-eQTL 8.57e-01 0.0191 0.106 0.842 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 89340 sc-eQTL 7.29e-02 -0.177 0.0984 0.842 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -475755 sc-eQTL 6.37e-01 0.0494 0.105 0.841 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 5.43e-01 -0.0697 0.114 0.841 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -244958 sc-eQTL 1.11e-01 -0.15 0.0933 0.841 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 63259 sc-eQTL 8.99e-01 0.00955 0.0751 0.841 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -87725 sc-eQTL 4.57e-01 -0.0817 0.11 0.841 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -823863 sc-eQTL 7.08e-01 -0.0374 0.0996 0.841 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -588532 sc-eQTL 1.39e-01 0.168 0.113 0.841 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -685193 sc-eQTL 3.44e-01 0.102 0.108 0.841 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 89340 sc-eQTL 1.89e-01 -0.142 0.108 0.841 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -475755 sc-eQTL 3.33e-01 -0.115 0.119 0.841 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -943860 sc-eQTL 7.82e-01 0.0282 0.101 0.841 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -475949 sc-eQTL 3.89e-01 -0.0701 0.0812 0.841 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -244958 sc-eQTL 3.65e-02 -0.186 0.0882 0.841 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 63259 sc-eQTL 6.73e-02 0.182 0.0988 0.841 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -823863 sc-eQTL 8.52e-01 0.0142 0.0757 0.841 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 102529 sc-eQTL 1.51e-01 0.165 0.114 0.841 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 89340 sc-eQTL 4.81e-01 0.0699 0.099 0.841 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162510 MATN1 97448 eQTL 0.00569 -0.0674 0.0243 0.0 0.00109 0.191
ENSG00000168528 SERINC2 -588532 eQTL 2.31e-05 0.202 0.0475 0.0 0.0 0.191
ENSG00000186056 MATN1-AS1 102529 eQTL 1.26e-02 -0.039 0.0156 0.0 0.0 0.191

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162510 MATN1 97448 1.23e-05 1.57e-05 3.2e-06 1.55e-05 2.47e-06 6.33e-06 2.46e-05 2.39e-06 1.74e-05 6.52e-06 1.54e-05 7.55e-06 5.78e-05 1.06e-05 4.55e-06 9.01e-06 1.12e-05 1.17e-05 4.18e-06 6.18e-06 6.83e-06 1.14e-05 1.81e-05 7.95e-06 3.04e-05 4.75e-06 7.13e-06 7.8e-06 1.8e-05 1.65e-05 1.28e-05 1.59e-06 1.43e-06 8.89e-06 1.17e-05 4.48e-06 4.28e-06 2.87e-06 7.1e-06 4.89e-06 1.97e-06 1.89e-05 2.68e-06 1.9e-07 1.88e-06 2.08e-06 1.94e-06 8.32e-07 4.6e-07
ENSG00000168528 SERINC2 -588532 1.39e-06 2.09e-06 5.15e-07 1.86e-06 4.49e-07 7.82e-07 1.87e-06 4.22e-07 1.63e-06 7.22e-07 2.02e-06 1.32e-06 7.36e-06 1.43e-06 4.59e-07 9.7e-07 1.57e-06 1.16e-06 1.46e-06 1.55e-06 6.57e-07 2.02e-06 1.78e-06 1.04e-06 3.08e-06 1.33e-06 9.49e-07 1.66e-06 1.7e-06 2.2e-06 8.36e-07 2.5e-07 2.86e-07 2.78e-06 1.94e-06 9.52e-07 2.02e-06 4.74e-07 2.22e-06 2.11e-06 1.66e-06 2.68e-06 4.26e-07 1.56e-07 3.04e-07 3.22e-07 2.27e-07 9.32e-08 5.44e-08
ENSG00000186056 MATN1-AS1 102529 1.2e-05 1.54e-05 3.18e-06 1.54e-05 2.4e-06 6.21e-06 2.37e-05 2.22e-06 1.73e-05 6.27e-06 1.5e-05 7.33e-06 5.64e-05 1.03e-05 4.5e-06 8.95e-06 1.11e-05 1.12e-05 4.15e-06 6.02e-06 6.67e-06 1.11e-05 1.77e-05 7.87e-06 3.01e-05 4.5e-06 6.81e-06 7.76e-06 1.75e-05 1.63e-05 1.23e-05 1.61e-06 1.33e-06 8.73e-06 1.15e-05 4.5e-06 4.28e-06 2.83e-06 7.07e-06 4.8e-06 1.97e-06 1.88e-05 2.67e-06 1.92e-07 1.85e-06 1.96e-06 1.91e-06 7.67e-07 4.39e-07