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Genes within 1Mb (chr1:30819794:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -476994 sc-eQTL 8.22e-01 0.0187 0.0834 0.342 B L1
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 2.62e-01 0.0748 0.0666 0.342 B L1
ENSG00000134644 PUM1 -246197 sc-eQTL 1.84e-01 -0.0743 0.0558 0.342 B L1
ENSG00000162510 MATN1 96209 sc-eQTL 7.74e-01 0.0169 0.0589 0.342 B L1
ENSG00000162511 LAPTM5 62020 sc-eQTL 7.81e-02 -0.0811 0.0458 0.342 B L1
ENSG00000162517 PEF1 -825102 sc-eQTL 1.29e-01 -0.106 0.0692 0.342 B L1
ENSG00000186056 MATN1-AS1 101290 sc-eQTL 3.73e-01 -0.0481 0.054 0.342 B L1
ENSG00000287510 AL137857.1 88101 sc-eQTL 8.86e-02 -0.109 0.0635 0.342 B L1
ENSG00000060688 SNRNP40 -476994 sc-eQTL 8.64e-01 -0.0124 0.072 0.342 CD4T L1
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 1.07e-01 0.0904 0.0559 0.342 CD4T L1
ENSG00000134644 PUM1 -246197 sc-eQTL 7.24e-01 -0.0177 0.0501 0.342 CD4T L1
ENSG00000162511 LAPTM5 62020 sc-eQTL 5.63e-01 -0.0321 0.0555 0.342 CD4T L1
ENSG00000162517 PEF1 -825102 sc-eQTL 7.58e-01 -0.0179 0.058 0.342 CD4T L1
ENSG00000186056 MATN1-AS1 101290 sc-eQTL 9.47e-01 -0.00331 0.0497 0.342 CD4T L1
ENSG00000287510 AL137857.1 88101 sc-eQTL 6.86e-01 -0.0241 0.0594 0.342 CD4T L1
ENSG00000060688 SNRNP40 -476994 sc-eQTL 4.95e-01 0.0644 0.0942 0.342 CD8T L1
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 2.12e-01 0.0783 0.0626 0.342 CD8T L1
ENSG00000134644 PUM1 -246197 sc-eQTL 7.64e-01 0.0166 0.0553 0.342 CD8T L1
ENSG00000162511 LAPTM5 62020 sc-eQTL 6.27e-01 0.0261 0.0537 0.342 CD8T L1
ENSG00000162517 PEF1 -825102 sc-eQTL 9.40e-01 -0.00501 0.0661 0.342 CD8T L1
ENSG00000186056 MATN1-AS1 101290 sc-eQTL 2.28e-01 -0.0758 0.0627 0.342 CD8T L1
ENSG00000287510 AL137857.1 88101 sc-eQTL 5.46e-01 -0.0477 0.079 0.342 CD8T L1
ENSG00000060688 SNRNP40 -476994 sc-eQTL 8.63e-01 0.0147 0.085 0.336 DC L1
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 6.76e-03 0.27 0.0988 0.336 DC L1
ENSG00000134644 PUM1 -246197 sc-eQTL 5.91e-01 0.0425 0.0788 0.336 DC L1
ENSG00000162511 LAPTM5 62020 sc-eQTL 6.68e-01 0.0241 0.0563 0.336 DC L1
ENSG00000162517 PEF1 -825102 sc-eQTL 5.93e-01 0.0488 0.0912 0.336 DC L1
ENSG00000168528 SERINC2 -589771 sc-eQTL 5.53e-01 -0.0552 0.0928 0.336 DC L1
ENSG00000284543 LINC01226 -686432 sc-eQTL 7.74e-01 -0.0177 0.0615 0.336 DC L1
ENSG00000287510 AL137857.1 88101 sc-eQTL 2.03e-02 -0.206 0.0879 0.336 DC L1
ENSG00000060688 SNRNP40 -476994 sc-eQTL 6.23e-01 0.0322 0.0654 0.342 Mono L1
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 4.37e-02 0.163 0.0803 0.342 Mono L1
ENSG00000134644 PUM1 -246197 sc-eQTL 9.04e-03 -0.135 0.0511 0.342 Mono L1
ENSG00000162511 LAPTM5 62020 sc-eQTL 3.89e-01 -0.0412 0.0477 0.342 Mono L1
ENSG00000162512 SDC3 -88964 sc-eQTL 7.28e-01 0.032 0.0918 0.342 Mono L1
ENSG00000162517 PEF1 -825102 sc-eQTL 1.20e-01 0.1 0.0641 0.342 Mono L1
ENSG00000168528 SERINC2 -589771 sc-eQTL 9.73e-01 -0.00332 0.0986 0.342 Mono L1
ENSG00000284543 LINC01226 -686432 sc-eQTL 3.84e-01 0.0756 0.0867 0.342 Mono L1
ENSG00000287510 AL137857.1 88101 sc-eQTL 2.30e-02 -0.172 0.075 0.342 Mono L1
ENSG00000060688 SNRNP40 -476994 sc-eQTL 4.71e-01 -0.0653 0.0904 0.341 NK L1
ENSG00000121753 ADGRB2 -945099 sc-eQTL 8.36e-01 -0.0162 0.0779 0.341 NK L1
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 5.58e-01 0.0363 0.0619 0.341 NK L1
ENSG00000134644 PUM1 -246197 sc-eQTL 1.95e-01 -0.0841 0.0647 0.341 NK L1
ENSG00000162511 LAPTM5 62020 sc-eQTL 6.39e-01 0.0351 0.0748 0.341 NK L1
ENSG00000162517 PEF1 -825102 sc-eQTL 9.87e-01 0.000904 0.0546 0.341 NK L1
ENSG00000186056 MATN1-AS1 101290 sc-eQTL 4.36e-01 -0.0655 0.0839 0.341 NK L1
ENSG00000287510 AL137857.1 88101 sc-eQTL 3.94e-01 -0.0662 0.0775 0.341 NK L1
ENSG00000060688 SNRNP40 -476994 sc-eQTL 7.83e-01 0.0187 0.0681 0.342 Other_T L1
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 1.06e-01 0.117 0.0723 0.342 Other_T L1
ENSG00000134644 PUM1 -246197 sc-eQTL 8.17e-01 -0.0151 0.0654 0.342 Other_T L1
ENSG00000162511 LAPTM5 62020 sc-eQTL 6.93e-01 -0.0212 0.0536 0.342 Other_T L1
ENSG00000162517 PEF1 -825102 sc-eQTL 5.66e-01 0.0411 0.0716 0.342 Other_T L1
ENSG00000186056 MATN1-AS1 101290 sc-eQTL 6.98e-01 -0.0341 0.0878 0.342 Other_T L1
ENSG00000287510 AL137857.1 88101 sc-eQTL 9.16e-01 -0.00967 0.0915 0.342 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -476994 sc-eQTL 3.87e-01 0.0974 0.112 0.321 B_Activated L2
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 5.59e-01 0.0663 0.113 0.321 B_Activated L2
ENSG00000134644 PUM1 -246197 sc-eQTL 1.33e-01 -0.158 0.105 0.321 B_Activated L2
ENSG00000162510 MATN1 96209 sc-eQTL 3.81e-01 -0.0806 0.0919 0.321 B_Activated L2
ENSG00000162511 LAPTM5 62020 sc-eQTL 3.84e-02 -0.132 0.0634 0.321 B_Activated L2
ENSG00000162517 PEF1 -825102 sc-eQTL 7.72e-01 0.0317 0.109 0.321 B_Activated L2
ENSG00000186056 MATN1-AS1 101290 sc-eQTL 2.49e-01 0.119 0.103 0.321 B_Activated L2
ENSG00000287510 AL137857.1 88101 sc-eQTL 4.24e-01 -0.0734 0.0916 0.321 B_Activated L2
ENSG00000060688 SNRNP40 -476994 sc-eQTL 8.96e-01 -0.0135 0.103 0.343 B_Intermediate L2
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 1.79e-01 0.115 0.0856 0.343 B_Intermediate L2
ENSG00000134644 PUM1 -246197 sc-eQTL 5.84e-01 -0.0444 0.0811 0.343 B_Intermediate L2
ENSG00000162510 MATN1 96209 sc-eQTL 1.80e-01 0.113 0.0841 0.343 B_Intermediate L2
ENSG00000162511 LAPTM5 62020 sc-eQTL 1.17e-01 -0.0812 0.0515 0.343 B_Intermediate L2
ENSG00000162517 PEF1 -825102 sc-eQTL 1.70e-01 -0.132 0.0958 0.343 B_Intermediate L2
ENSG00000186056 MATN1-AS1 101290 sc-eQTL 2.50e-01 0.0837 0.0725 0.343 B_Intermediate L2
ENSG00000287510 AL137857.1 88101 sc-eQTL 4.94e-02 -0.159 0.0806 0.343 B_Intermediate L2
ENSG00000060688 SNRNP40 -476994 sc-eQTL 8.86e-01 -0.0142 0.0989 0.341 B_Memory L2
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 8.73e-01 -0.0146 0.0911 0.341 B_Memory L2
ENSG00000134644 PUM1 -246197 sc-eQTL 1.83e-01 0.105 0.0789 0.341 B_Memory L2
ENSG00000162510 MATN1 96209 sc-eQTL 3.06e-01 -0.0777 0.0757 0.341 B_Memory L2
ENSG00000162511 LAPTM5 62020 sc-eQTL 6.76e-02 -0.123 0.0667 0.341 B_Memory L2
ENSG00000162517 PEF1 -825102 sc-eQTL 4.42e-01 -0.0691 0.0896 0.341 B_Memory L2
ENSG00000186056 MATN1-AS1 101290 sc-eQTL 8.47e-02 -0.132 0.0764 0.341 B_Memory L2
ENSG00000287510 AL137857.1 88101 sc-eQTL 1.96e-01 -0.116 0.0897 0.341 B_Memory L2
ENSG00000060688 SNRNP40 -476994 sc-eQTL 3.51e-01 0.085 0.091 0.342 B_Naive1 L2
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 5.89e-01 0.0426 0.0787 0.342 B_Naive1 L2
ENSG00000134644 PUM1 -246197 sc-eQTL 3.71e-01 -0.0622 0.0694 0.342 B_Naive1 L2
ENSG00000162510 MATN1 96209 sc-eQTL 9.99e-01 -0.000118 0.0705 0.342 B_Naive1 L2
ENSG00000162511 LAPTM5 62020 sc-eQTL 7.57e-02 -0.0834 0.0467 0.342 B_Naive1 L2
ENSG00000162517 PEF1 -825102 sc-eQTL 6.88e-01 0.0333 0.083 0.342 B_Naive1 L2
ENSG00000186056 MATN1-AS1 101290 sc-eQTL 3.29e-01 -0.0604 0.0617 0.342 B_Naive1 L2
ENSG00000287510 AL137857.1 88101 sc-eQTL 8.16e-02 -0.133 0.0759 0.342 B_Naive1 L2
ENSG00000060688 SNRNP40 -476994 sc-eQTL 9.84e-01 -0.00195 0.0965 0.341 B_Naive2 L2
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 7.72e-01 0.0231 0.0796 0.341 B_Naive2 L2
ENSG00000134644 PUM1 -246197 sc-eQTL 8.95e-01 0.0103 0.0779 0.341 B_Naive2 L2
ENSG00000162510 MATN1 96209 sc-eQTL 6.22e-01 0.037 0.0748 0.341 B_Naive2 L2
ENSG00000162511 LAPTM5 62020 sc-eQTL 1.39e-01 -0.0751 0.0506 0.341 B_Naive2 L2
ENSG00000162517 PEF1 -825102 sc-eQTL 8.66e-01 0.0156 0.0924 0.341 B_Naive2 L2
ENSG00000186056 MATN1-AS1 101290 sc-eQTL 5.75e-01 -0.0416 0.0739 0.341 B_Naive2 L2
ENSG00000287510 AL137857.1 88101 sc-eQTL 1.72e-01 -0.109 0.0796 0.341 B_Naive2 L2
ENSG00000060688 SNRNP40 -476994 sc-eQTL 4.39e-01 0.0736 0.0949 0.339 CD4_CTL L2
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 8.11e-01 0.0223 0.0934 0.339 CD4_CTL L2
ENSG00000134644 PUM1 -246197 sc-eQTL 5.53e-01 0.0544 0.0916 0.339 CD4_CTL L2
ENSG00000162511 LAPTM5 62020 sc-eQTL 3.66e-01 -0.0739 0.0815 0.339 CD4_CTL L2
ENSG00000162517 PEF1 -825102 sc-eQTL 3.41e-01 0.0798 0.0835 0.339 CD4_CTL L2
ENSG00000186056 MATN1-AS1 101290 sc-eQTL 7.62e-01 -0.0271 0.0893 0.339 CD4_CTL L2
ENSG00000287510 AL137857.1 88101 sc-eQTL 4.00e-01 0.0664 0.0787 0.339 CD4_CTL L2
ENSG00000060688 SNRNP40 -476994 sc-eQTL 2.47e-01 -0.0872 0.075 0.342 CD4_Naive L2
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 1.45e-02 0.162 0.0658 0.342 CD4_Naive L2
ENSG00000134644 PUM1 -246197 sc-eQTL 3.45e-01 -0.0503 0.0532 0.342 CD4_Naive L2
ENSG00000162511 LAPTM5 62020 sc-eQTL 4.79e-01 -0.0404 0.057 0.342 CD4_Naive L2
ENSG00000162517 PEF1 -825102 sc-eQTL 7.09e-01 -0.0234 0.0626 0.342 CD4_Naive L2
ENSG00000186056 MATN1-AS1 101290 sc-eQTL 7.68e-01 0.0171 0.0579 0.342 CD4_Naive L2
ENSG00000287510 AL137857.1 88101 sc-eQTL 1.67e-01 -0.0918 0.0662 0.342 CD4_Naive L2
ENSG00000060688 SNRNP40 -476994 sc-eQTL 1.55e-02 0.228 0.0934 0.342 CD4_TCM L2
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 8.93e-02 -0.129 0.0758 0.342 CD4_TCM L2
ENSG00000134644 PUM1 -246197 sc-eQTL 7.44e-01 -0.0221 0.0675 0.342 CD4_TCM L2
ENSG00000162511 LAPTM5 62020 sc-eQTL 7.87e-01 0.0152 0.056 0.342 CD4_TCM L2
ENSG00000162517 PEF1 -825102 sc-eQTL 5.12e-01 0.0493 0.075 0.342 CD4_TCM L2
ENSG00000186056 MATN1-AS1 101290 sc-eQTL 5.05e-01 -0.0475 0.071 0.342 CD4_TCM L2
ENSG00000287510 AL137857.1 88101 sc-eQTL 5.52e-01 -0.0471 0.0792 0.342 CD4_TCM L2
ENSG00000060688 SNRNP40 -476994 sc-eQTL 9.50e-01 0.00595 0.0943 0.342 CD4_TEM L2
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 4.79e-01 0.0637 0.0897 0.342 CD4_TEM L2
ENSG00000134644 PUM1 -246197 sc-eQTL 1.81e-01 0.1 0.0745 0.342 CD4_TEM L2
ENSG00000162511 LAPTM5 62020 sc-eQTL 9.33e-01 -0.00633 0.0757 0.342 CD4_TEM L2
ENSG00000162517 PEF1 -825102 sc-eQTL 6.22e-01 0.0419 0.0847 0.342 CD4_TEM L2
ENSG00000186056 MATN1-AS1 101290 sc-eQTL 8.80e-01 0.0134 0.0885 0.342 CD4_TEM L2
ENSG00000287510 AL137857.1 88101 sc-eQTL 6.90e-01 -0.0348 0.0872 0.342 CD4_TEM L2
ENSG00000060688 SNRNP40 -476994 sc-eQTL 4.99e-01 0.0689 0.102 0.342 CD8_CTL L2
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 6.39e-02 0.144 0.0774 0.342 CD8_CTL L2
ENSG00000134644 PUM1 -246197 sc-eQTL 4.02e-01 -0.0636 0.0757 0.342 CD8_CTL L2
ENSG00000162511 LAPTM5 62020 sc-eQTL 8.46e-02 0.144 0.0833 0.342 CD8_CTL L2
ENSG00000162517 PEF1 -825102 sc-eQTL 8.42e-02 0.126 0.0726 0.342 CD8_CTL L2
ENSG00000186056 MATN1-AS1 101290 sc-eQTL 6.20e-01 -0.0438 0.0882 0.342 CD8_CTL L2
ENSG00000287510 AL137857.1 88101 sc-eQTL 9.61e-01 0.00402 0.083 0.342 CD8_CTL L2
ENSG00000060688 SNRNP40 -476994 sc-eQTL 9.44e-01 0.00661 0.0949 0.342 CD8_Naive L2
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 8.15e-01 0.0192 0.0818 0.342 CD8_Naive L2
ENSG00000134644 PUM1 -246197 sc-eQTL 8.23e-01 -0.0147 0.0658 0.342 CD8_Naive L2
ENSG00000162511 LAPTM5 62020 sc-eQTL 2.29e-01 -0.0759 0.0629 0.342 CD8_Naive L2
ENSG00000162517 PEF1 -825102 sc-eQTL 7.43e-01 0.0288 0.0877 0.342 CD8_Naive L2
ENSG00000186056 MATN1-AS1 101290 sc-eQTL 9.20e-01 0.00789 0.0788 0.342 CD8_Naive L2
ENSG00000287510 AL137857.1 88101 sc-eQTL 8.25e-01 0.019 0.0857 0.342 CD8_Naive L2
ENSG00000060688 SNRNP40 -476994 sc-eQTL 7.13e-01 -0.0388 0.105 0.347 CD8_TCM L2
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 6.49e-01 -0.0441 0.0967 0.347 CD8_TCM L2
ENSG00000134644 PUM1 -246197 sc-eQTL 7.49e-01 -0.0292 0.0909 0.347 CD8_TCM L2
ENSG00000162511 LAPTM5 62020 sc-eQTL 6.19e-01 0.0474 0.0951 0.347 CD8_TCM L2
ENSG00000162517 PEF1 -825102 sc-eQTL 2.03e-01 -0.124 0.0969 0.347 CD8_TCM L2
ENSG00000186056 MATN1-AS1 101290 sc-eQTL 9.35e-01 -0.0072 0.0881 0.347 CD8_TCM L2
ENSG00000287510 AL137857.1 88101 sc-eQTL 3.91e-02 -0.183 0.0881 0.347 CD8_TCM L2
ENSG00000060688 SNRNP40 -476994 sc-eQTL 3.91e-01 0.0863 0.1 0.331 CD8_TEM L2
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 2.91e-01 0.102 0.0961 0.331 CD8_TEM L2
ENSG00000134644 PUM1 -246197 sc-eQTL 5.35e-02 -0.19 0.0976 0.331 CD8_TEM L2
ENSG00000162511 LAPTM5 62020 sc-eQTL 9.11e-01 0.0104 0.0926 0.331 CD8_TEM L2
ENSG00000162517 PEF1 -825102 sc-eQTL 8.09e-01 -0.0211 0.0872 0.331 CD8_TEM L2
ENSG00000186056 MATN1-AS1 101290 sc-eQTL 1.27e-01 0.146 0.0956 0.331 CD8_TEM L2
ENSG00000287510 AL137857.1 88101 sc-eQTL 2.63e-01 -0.0973 0.0867 0.331 CD8_TEM L2
ENSG00000060688 SNRNP40 -476994 sc-eQTL 5.86e-01 -0.0541 0.0991 0.338 MAIT L2
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 2.70e-04 0.315 0.0851 0.338 MAIT L2
ENSG00000134644 PUM1 -246197 sc-eQTL 7.38e-01 -0.0282 0.0842 0.338 MAIT L2
ENSG00000162511 LAPTM5 62020 sc-eQTL 3.21e-01 0.0789 0.0793 0.338 MAIT L2
ENSG00000162517 PEF1 -825102 sc-eQTL 1.92e-01 0.114 0.087 0.338 MAIT L2
ENSG00000186056 MATN1-AS1 101290 sc-eQTL 6.10e-01 -0.0452 0.0884 0.338 MAIT L2
ENSG00000287510 AL137857.1 88101 sc-eQTL 9.78e-01 -0.00251 0.0912 0.338 MAIT L2
ENSG00000060688 SNRNP40 -476994 sc-eQTL 6.87e-01 -0.0418 0.104 0.338 NK_CD56bright L2
ENSG00000121753 ADGRB2 -945099 sc-eQTL 9.49e-01 -0.00516 0.0811 0.338 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 8.89e-01 0.0122 0.0876 0.338 NK_CD56bright L2
ENSG00000134644 PUM1 -246197 sc-eQTL 1.86e-01 0.121 0.0916 0.338 NK_CD56bright L2
ENSG00000162511 LAPTM5 62020 sc-eQTL 3.18e-01 0.0906 0.0905 0.338 NK_CD56bright L2
ENSG00000162517 PEF1 -825102 sc-eQTL 1.58e-01 -0.124 0.0877 0.338 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 101290 sc-eQTL 9.26e-01 0.00846 0.0911 0.338 NK_CD56bright L2
ENSG00000287510 AL137857.1 88101 sc-eQTL 2.80e-01 -0.097 0.0895 0.338 NK_CD56bright L2
ENSG00000060688 SNRNP40 -476994 sc-eQTL 7.51e-01 -0.0304 0.0954 0.341 NK_CD56dim L2
ENSG00000121753 ADGRB2 -945099 sc-eQTL 5.45e-01 -0.0509 0.0839 0.341 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 1.87e-01 0.0931 0.0703 0.341 NK_CD56dim L2
ENSG00000134644 PUM1 -246197 sc-eQTL 1.86e-01 -0.0957 0.0721 0.341 NK_CD56dim L2
ENSG00000162511 LAPTM5 62020 sc-eQTL 8.76e-01 0.012 0.0772 0.341 NK_CD56dim L2
ENSG00000162517 PEF1 -825102 sc-eQTL 7.09e-01 -0.0256 0.0687 0.341 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 101290 sc-eQTL 6.64e-01 -0.042 0.0967 0.341 NK_CD56dim L2
ENSG00000287510 AL137857.1 88101 sc-eQTL 1.49e-01 -0.115 0.0794 0.341 NK_CD56dim L2
ENSG00000060688 SNRNP40 -476994 sc-eQTL 2.42e-01 -0.121 0.103 0.338 NK_HLA L2
ENSG00000121753 ADGRB2 -945099 sc-eQTL 8.73e-01 0.0131 0.0821 0.338 NK_HLA L2
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 6.91e-01 -0.0367 0.0923 0.338 NK_HLA L2
ENSG00000134644 PUM1 -246197 sc-eQTL 2.30e-01 -0.108 0.0896 0.338 NK_HLA L2
ENSG00000162511 LAPTM5 62020 sc-eQTL 8.49e-01 -0.0164 0.0859 0.338 NK_HLA L2
ENSG00000162517 PEF1 -825102 sc-eQTL 9.60e-01 -0.0049 0.0967 0.338 NK_HLA L2
ENSG00000186056 MATN1-AS1 101290 sc-eQTL 4.29e-01 0.0723 0.0912 0.338 NK_HLA L2
ENSG00000287510 AL137857.1 88101 sc-eQTL 2.81e-01 -0.0952 0.0881 0.338 NK_HLA L2
ENSG00000060688 SNRNP40 -476994 sc-eQTL 7.36e-01 0.0314 0.093 0.341 NK_cytokine L2
ENSG00000121753 ADGRB2 -945099 sc-eQTL 6.20e-01 0.0417 0.084 0.341 NK_cytokine L2
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 5.67e-01 -0.0415 0.0725 0.341 NK_cytokine L2
ENSG00000134644 PUM1 -246197 sc-eQTL 5.71e-01 0.0445 0.0784 0.341 NK_cytokine L2
ENSG00000162511 LAPTM5 62020 sc-eQTL 7.17e-01 0.0314 0.0864 0.341 NK_cytokine L2
ENSG00000162517 PEF1 -825102 sc-eQTL 7.91e-01 -0.0195 0.0736 0.341 NK_cytokine L2
ENSG00000186056 MATN1-AS1 101290 sc-eQTL 3.41e-01 -0.0872 0.0914 0.341 NK_cytokine L2
ENSG00000287510 AL137857.1 88101 sc-eQTL 8.23e-01 0.0191 0.0852 0.341 NK_cytokine L2
ENSG00000060688 SNRNP40 -476994 sc-eQTL 3.16e-01 0.11 0.11 0.337 PB L2
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 8.56e-01 0.0232 0.128 0.337 PB L2
ENSG00000134644 PUM1 -246197 sc-eQTL 3.73e-01 0.099 0.111 0.337 PB L2
ENSG00000162510 MATN1 96209 sc-eQTL 5.66e-01 0.0596 0.103 0.337 PB L2
ENSG00000162511 LAPTM5 62020 sc-eQTL 4.80e-01 -0.0523 0.0738 0.337 PB L2
ENSG00000162517 PEF1 -825102 sc-eQTL 1.72e-01 0.155 0.113 0.337 PB L2
ENSG00000186056 MATN1-AS1 101290 sc-eQTL 1.46e-01 0.147 0.1 0.337 PB L2
ENSG00000287510 AL137857.1 88101 sc-eQTL 2.13e-01 -0.134 0.107 0.337 PB L2
ENSG00000060688 SNRNP40 -476994 sc-eQTL 5.56e-02 0.141 0.0735 0.343 Pro_T L2
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 1.51e-01 -0.135 0.0936 0.343 Pro_T L2
ENSG00000134644 PUM1 -246197 sc-eQTL 7.44e-01 0.0286 0.0877 0.343 Pro_T L2
ENSG00000162511 LAPTM5 62020 sc-eQTL 7.59e-01 0.0193 0.0629 0.343 Pro_T L2
ENSG00000162517 PEF1 -825102 sc-eQTL 1.67e-01 0.127 0.092 0.343 Pro_T L2
ENSG00000186056 MATN1-AS1 101290 sc-eQTL 8.68e-01 -0.0146 0.088 0.343 Pro_T L2
ENSG00000287510 AL137857.1 88101 sc-eQTL 1.44e-01 -0.118 0.0805 0.343 Pro_T L2
ENSG00000060688 SNRNP40 -476994 sc-eQTL 4.05e-01 -0.08 0.0959 0.342 Treg L2
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 8.51e-01 -0.0175 0.0929 0.342 Treg L2
ENSG00000134644 PUM1 -246197 sc-eQTL 4.66e-01 -0.0543 0.0743 0.342 Treg L2
ENSG00000162511 LAPTM5 62020 sc-eQTL 2.65e-01 -0.0949 0.0849 0.342 Treg L2
ENSG00000162517 PEF1 -825102 sc-eQTL 2.32e-01 -0.11 0.0917 0.342 Treg L2
ENSG00000186056 MATN1-AS1 101290 sc-eQTL 4.10e-01 0.0715 0.0866 0.342 Treg L2
ENSG00000287510 AL137857.1 88101 sc-eQTL 2.42e-01 -0.101 0.0864 0.342 Treg L2
ENSG00000060688 SNRNP40 -476994 sc-eQTL 8.84e-01 0.0146 0.1 0.337 cDC L2
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 2.55e-01 0.123 0.108 0.337 cDC L2
ENSG00000134644 PUM1 -246197 sc-eQTL 9.04e-01 -0.0112 0.093 0.337 cDC L2
ENSG00000162511 LAPTM5 62020 sc-eQTL 2.41e-01 -0.0764 0.065 0.337 cDC L2
ENSG00000162517 PEF1 -825102 sc-eQTL 7.44e-01 0.0309 0.0944 0.337 cDC L2
ENSG00000168528 SERINC2 -589771 sc-eQTL 2.22e-01 -0.102 0.0834 0.337 cDC L2
ENSG00000284543 LINC01226 -686432 sc-eQTL 2.07e-01 0.104 0.0819 0.337 cDC L2
ENSG00000287510 AL137857.1 88101 sc-eQTL 4.55e-02 -0.176 0.0876 0.337 cDC L2
ENSG00000060688 SNRNP40 -476994 sc-eQTL 5.82e-01 0.0436 0.0789 0.342 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 4.52e-01 0.0663 0.088 0.342 cMono_IL1B L2
ENSG00000134644 PUM1 -246197 sc-eQTL 2.00e-02 -0.138 0.0589 0.342 cMono_IL1B L2
ENSG00000162511 LAPTM5 62020 sc-eQTL 7.48e-01 -0.0169 0.0523 0.342 cMono_IL1B L2
ENSG00000162512 SDC3 -88964 sc-eQTL 5.73e-01 0.0557 0.0985 0.342 cMono_IL1B L2
ENSG00000162517 PEF1 -825102 sc-eQTL 9.56e-01 -0.0044 0.0806 0.342 cMono_IL1B L2
ENSG00000168528 SERINC2 -589771 sc-eQTL 8.33e-01 -0.0211 0.0998 0.342 cMono_IL1B L2
ENSG00000284543 LINC01226 -686432 sc-eQTL 6.58e-01 0.0391 0.0882 0.342 cMono_IL1B L2
ENSG00000287510 AL137857.1 88101 sc-eQTL 5.16e-01 -0.0534 0.0822 0.342 cMono_IL1B L2
ENSG00000060688 SNRNP40 -476994 sc-eQTL 9.46e-01 -0.00564 0.0829 0.342 cMono_S100A L2
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 2.04e-01 0.124 0.0975 0.342 cMono_S100A L2
ENSG00000134644 PUM1 -246197 sc-eQTL 4.11e-02 -0.144 0.0701 0.342 cMono_S100A L2
ENSG00000162511 LAPTM5 62020 sc-eQTL 1.73e-01 -0.0741 0.0541 0.342 cMono_S100A L2
ENSG00000162512 SDC3 -88964 sc-eQTL 9.94e-01 0.000699 0.094 0.342 cMono_S100A L2
ENSG00000162517 PEF1 -825102 sc-eQTL 9.56e-02 0.141 0.0843 0.342 cMono_S100A L2
ENSG00000168528 SERINC2 -589771 sc-eQTL 5.16e-01 -0.0646 0.0994 0.342 cMono_S100A L2
ENSG00000284543 LINC01226 -686432 sc-eQTL 3.90e-01 0.0695 0.0807 0.342 cMono_S100A L2
ENSG00000287510 AL137857.1 88101 sc-eQTL 2.07e-01 -0.102 0.0808 0.342 cMono_S100A L2
ENSG00000060688 SNRNP40 -476994 sc-eQTL 5.03e-01 0.0803 0.12 0.352 gdT L2
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 5.41e-01 -0.0629 0.103 0.352 gdT L2
ENSG00000134644 PUM1 -246197 sc-eQTL 5.11e-01 0.0696 0.106 0.352 gdT L2
ENSG00000162511 LAPTM5 62020 sc-eQTL 3.79e-02 -0.238 0.113 0.352 gdT L2
ENSG00000162517 PEF1 -825102 sc-eQTL 7.56e-01 -0.0328 0.105 0.352 gdT L2
ENSG00000186056 MATN1-AS1 101290 sc-eQTL 2.23e-01 0.129 0.106 0.352 gdT L2
ENSG00000287510 AL137857.1 88101 sc-eQTL 4.74e-01 0.0738 0.103 0.352 gdT L2
ENSG00000060688 SNRNP40 -476994 sc-eQTL 5.91e-01 0.0495 0.0921 0.34 intMono L2
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 2.69e-01 0.109 0.0987 0.34 intMono L2
ENSG00000134644 PUM1 -246197 sc-eQTL 6.92e-01 -0.0333 0.084 0.34 intMono L2
ENSG00000162511 LAPTM5 62020 sc-eQTL 6.54e-01 -0.0296 0.0659 0.34 intMono L2
ENSG00000162512 SDC3 -88964 sc-eQTL 5.87e-01 0.0491 0.0902 0.34 intMono L2
ENSG00000162517 PEF1 -825102 sc-eQTL 1.75e-01 0.128 0.0944 0.34 intMono L2
ENSG00000168528 SERINC2 -589771 sc-eQTL 5.63e-01 -0.0547 0.0944 0.34 intMono L2
ENSG00000284543 LINC01226 -686432 sc-eQTL 3.92e-01 0.0767 0.0894 0.34 intMono L2
ENSG00000287510 AL137857.1 88101 sc-eQTL 2.09e-01 -0.112 0.0892 0.34 intMono L2
ENSG00000060688 SNRNP40 -476994 sc-eQTL 5.72e-01 0.0496 0.0877 0.333 ncMono L2
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 8.93e-01 -0.0126 0.0936 0.333 ncMono L2
ENSG00000134644 PUM1 -246197 sc-eQTL 1.80e-01 -0.102 0.0761 0.333 ncMono L2
ENSG00000162511 LAPTM5 62020 sc-eQTL 7.65e-01 0.0208 0.0694 0.333 ncMono L2
ENSG00000162512 SDC3 -88964 sc-eQTL 6.77e-01 -0.0325 0.0778 0.333 ncMono L2
ENSG00000162517 PEF1 -825102 sc-eQTL 5.34e-01 0.0556 0.0892 0.333 ncMono L2
ENSG00000168528 SERINC2 -589771 sc-eQTL 8.84e-01 0.0124 0.085 0.333 ncMono L2
ENSG00000284543 LINC01226 -686432 sc-eQTL 1.34e-01 -0.127 0.0844 0.333 ncMono L2
ENSG00000287510 AL137857.1 88101 sc-eQTL 1.63e-03 -0.274 0.0859 0.333 ncMono L2
ENSG00000060688 SNRNP40 -476994 sc-eQTL 2.72e-01 0.112 0.101 0.328 pDC L2
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 2.08e-03 0.339 0.108 0.328 pDC L2
ENSG00000134644 PUM1 -246197 sc-eQTL 7.17e-01 0.0337 0.0925 0.328 pDC L2
ENSG00000162511 LAPTM5 62020 sc-eQTL 1.60e-01 0.121 0.0855 0.328 pDC L2
ENSG00000162517 PEF1 -825102 sc-eQTL 5.87e-01 0.0607 0.112 0.328 pDC L2
ENSG00000168528 SERINC2 -589771 sc-eQTL 5.95e-01 0.0555 0.104 0.328 pDC L2
ENSG00000284543 LINC01226 -686432 sc-eQTL 6.84e-01 -0.033 0.081 0.328 pDC L2
ENSG00000287510 AL137857.1 88101 sc-eQTL 9.43e-01 -0.00688 0.0953 0.328 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -476994 sc-eQTL 5.53e-01 -0.0578 0.0974 0.342 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 3.08e-01 0.0828 0.0809 0.342 B_Memory LOneK1K
ENSG00000134644 PUM1 -246197 sc-eQTL 9.98e-01 -0.000151 0.0719 0.342 B_Memory LOneK1K
ENSG00000162510 MATN1 96209 sc-eQTL 8.12e-01 0.0195 0.082 0.342 B_Memory LOneK1K
ENSG00000162511 LAPTM5 62020 sc-eQTL 3.62e-02 -0.107 0.051 0.342 B_Memory LOneK1K
ENSG00000162517 PEF1 -825102 sc-eQTL 1.18e-01 -0.133 0.0848 0.342 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 101290 sc-eQTL 5.77e-01 0.0381 0.0681 0.342 B_Memory LOneK1K
ENSG00000287510 AL137857.1 88101 sc-eQTL 1.61e-01 -0.104 0.0739 0.342 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -476994 sc-eQTL 9.80e-01 0.00228 0.0887 0.342 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 5.30e-01 0.0441 0.0701 0.342 B_Naive LOneK1K
ENSG00000134644 PUM1 -246197 sc-eQTL 3.29e-01 -0.0648 0.0662 0.342 B_Naive LOneK1K
ENSG00000162510 MATN1 96209 sc-eQTL 9.66e-01 0.00269 0.0639 0.342 B_Naive LOneK1K
ENSG00000162511 LAPTM5 62020 sc-eQTL 1.29e-01 -0.0682 0.0447 0.342 B_Naive LOneK1K
ENSG00000162517 PEF1 -825102 sc-eQTL 8.65e-01 0.0139 0.0821 0.342 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 101290 sc-eQTL 1.36e-01 -0.0864 0.0578 0.342 B_Naive LOneK1K
ENSG00000287510 AL137857.1 88101 sc-eQTL 8.58e-02 -0.118 0.0685 0.342 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -476994 sc-eQTL 5.84e-01 0.041 0.0747 0.342 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 1.27e-01 0.129 0.0842 0.342 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -246197 sc-eQTL 3.66e-03 -0.156 0.053 0.342 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 62020 sc-eQTL 3.45e-01 -0.0448 0.0474 0.342 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -88964 sc-eQTL 8.66e-01 0.0163 0.0969 0.342 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -825102 sc-eQTL 4.15e-01 0.0556 0.068 0.342 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -589771 sc-eQTL 7.86e-01 -0.0271 0.0997 0.342 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -686432 sc-eQTL 3.77e-01 0.0722 0.0816 0.342 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 88101 sc-eQTL 2.14e-01 -0.095 0.0762 0.342 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -476994 sc-eQTL 6.71e-01 0.0351 0.0824 0.341 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 1.51e-01 0.129 0.0898 0.341 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -246197 sc-eQTL 1.79e-01 -0.0992 0.0736 0.341 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 62020 sc-eQTL 8.73e-01 -0.00944 0.0591 0.341 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -88964 sc-eQTL 4.50e-01 0.0652 0.0862 0.341 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -825102 sc-eQTL 4.79e-01 0.0556 0.0784 0.341 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -589771 sc-eQTL 8.09e-01 -0.0217 0.0895 0.341 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -686432 sc-eQTL 4.11e-01 0.0699 0.0849 0.341 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 88101 sc-eQTL 7.73e-03 -0.225 0.0837 0.341 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -476994 sc-eQTL 5.77e-01 -0.0509 0.091 0.341 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -945099 sc-eQTL 8.84e-01 -0.0113 0.0775 0.341 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -477188 sc-eQTL 5.44e-01 0.0378 0.0621 0.341 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -246197 sc-eQTL 2.01e-01 -0.0872 0.0679 0.341 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 62020 sc-eQTL 8.13e-01 0.018 0.0761 0.341 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -825102 sc-eQTL 9.86e-01 -0.00105 0.0579 0.341 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 101290 sc-eQTL 4.53e-01 -0.0659 0.0877 0.341 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 88101 sc-eQTL 3.40e-01 -0.0723 0.0756 0.341 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000121766 ZCCHC17 -477188 eQTL 3.51e-02 -0.0409 0.0194 0.0 0.0 0.314

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000121766 ZCCHC17 -477188 6.09e-07 3.23e-07 6.99e-08 2.92e-07 1.06e-07 1.28e-07 3.33e-07 7.46e-08 2.6e-07 1.5e-07 3.32e-07 2.49e-07 5.09e-07 9.15e-08 9.2e-08 1.26e-07 8.64e-08 2.83e-07 7.53e-08 7.49e-08 1.34e-07 2.24e-07 2e-07 5.11e-08 3.98e-07 1.9e-07 1.48e-07 1.88e-07 1.47e-07 1.46e-07 1.95e-07 6.78e-08 4.76e-08 1.15e-07 1.69e-07 5.04e-08 6.67e-08 6.11e-08 4.83e-08 7.53e-08 3.6e-08 2.65e-07 3.02e-08 7.2e-09 4.99e-08 8.76e-09 7.8e-08 0.0 4.97e-08