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Genes within 1Mb (chr1:30816746:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -480042 sc-eQTL 8.65e-01 0.0133 0.0781 0.549 B L1
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 3.80e-01 0.055 0.0624 0.549 B L1
ENSG00000134644 PUM1 -249245 sc-eQTL 6.86e-01 -0.0213 0.0524 0.549 B L1
ENSG00000162510 MATN1 93161 sc-eQTL 9.12e-01 -0.00609 0.0551 0.549 B L1
ENSG00000162511 LAPTM5 58972 sc-eQTL 3.56e-01 -0.0399 0.0431 0.549 B L1
ENSG00000162517 PEF1 -828150 sc-eQTL 9.30e-01 -0.00576 0.0652 0.549 B L1
ENSG00000186056 MATN1-AS1 98242 sc-eQTL 7.19e-01 0.0182 0.0506 0.549 B L1
ENSG00000287510 AL137857.1 85053 sc-eQTL 5.69e-01 -0.0341 0.0599 0.549 B L1
ENSG00000060688 SNRNP40 -480042 sc-eQTL 3.89e-01 -0.0588 0.0681 0.549 CD4T L1
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 5.20e-01 0.0343 0.0532 0.549 CD4T L1
ENSG00000134644 PUM1 -249245 sc-eQTL 7.76e-01 -0.0135 0.0474 0.549 CD4T L1
ENSG00000162511 LAPTM5 58972 sc-eQTL 1.53e-01 0.075 0.0523 0.549 CD4T L1
ENSG00000162517 PEF1 -828150 sc-eQTL 5.01e-01 -0.037 0.0549 0.549 CD4T L1
ENSG00000186056 MATN1-AS1 98242 sc-eQTL 7.91e-01 0.0125 0.047 0.549 CD4T L1
ENSG00000287510 AL137857.1 85053 sc-eQTL 7.17e-01 0.0204 0.0563 0.549 CD4T L1
ENSG00000060688 SNRNP40 -480042 sc-eQTL 4.39e-01 0.0696 0.0897 0.549 CD8T L1
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 3.44e-01 0.0566 0.0597 0.549 CD8T L1
ENSG00000134644 PUM1 -249245 sc-eQTL 6.07e-01 0.0271 0.0526 0.549 CD8T L1
ENSG00000162511 LAPTM5 58972 sc-eQTL 4.76e-01 0.0365 0.0511 0.549 CD8T L1
ENSG00000162517 PEF1 -828150 sc-eQTL 8.11e-01 -0.0151 0.063 0.549 CD8T L1
ENSG00000186056 MATN1-AS1 98242 sc-eQTL 9.76e-01 -0.00178 0.0599 0.549 CD8T L1
ENSG00000287510 AL137857.1 85053 sc-eQTL 9.16e-01 0.00792 0.0753 0.549 CD8T L1
ENSG00000060688 SNRNP40 -480042 sc-eQTL 1.75e-01 0.107 0.0784 0.547 DC L1
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 6.26e-02 0.173 0.0924 0.547 DC L1
ENSG00000134644 PUM1 -249245 sc-eQTL 9.48e-01 0.00481 0.073 0.547 DC L1
ENSG00000162511 LAPTM5 58972 sc-eQTL 5.76e-01 -0.0292 0.0521 0.547 DC L1
ENSG00000162517 PEF1 -828150 sc-eQTL 3.71e-01 -0.0756 0.0844 0.547 DC L1
ENSG00000168528 SERINC2 -592819 sc-eQTL 4.42e-01 -0.0662 0.0859 0.547 DC L1
ENSG00000284543 LINC01226 -689480 sc-eQTL 1.49e-02 -0.138 0.0561 0.547 DC L1
ENSG00000287510 AL137857.1 85053 sc-eQTL 1.16e-02 -0.207 0.0812 0.547 DC L1
ENSG00000060688 SNRNP40 -480042 sc-eQTL 4.87e-01 0.0422 0.0605 0.549 Mono L1
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 4.40e-01 0.0581 0.075 0.549 Mono L1
ENSG00000134644 PUM1 -249245 sc-eQTL 5.65e-02 -0.0916 0.0477 0.549 Mono L1
ENSG00000162511 LAPTM5 58972 sc-eQTL 2.99e-01 -0.046 0.0442 0.549 Mono L1
ENSG00000162512 SDC3 -92012 sc-eQTL 1.93e-01 0.111 0.0848 0.549 Mono L1
ENSG00000162517 PEF1 -828150 sc-eQTL 7.35e-02 0.107 0.0593 0.549 Mono L1
ENSG00000168528 SERINC2 -592819 sc-eQTL 4.48e-01 0.0694 0.0912 0.549 Mono L1
ENSG00000284543 LINC01226 -689480 sc-eQTL 4.53e-01 0.0604 0.0804 0.549 Mono L1
ENSG00000287510 AL137857.1 85053 sc-eQTL 1.26e-01 -0.107 0.0699 0.549 Mono L1
ENSG00000060688 SNRNP40 -480042 sc-eQTL 9.77e-01 0.00245 0.0857 0.549 NK L1
ENSG00000121753 ADGRB2 -948147 sc-eQTL 9.01e-01 -0.00914 0.0738 0.549 NK L1
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 3.73e-01 0.0523 0.0585 0.549 NK L1
ENSG00000134644 PUM1 -249245 sc-eQTL 3.48e-01 -0.0577 0.0614 0.549 NK L1
ENSG00000162511 LAPTM5 58972 sc-eQTL 7.98e-01 -0.0181 0.0708 0.549 NK L1
ENSG00000162517 PEF1 -828150 sc-eQTL 6.36e-01 -0.0245 0.0517 0.549 NK L1
ENSG00000186056 MATN1-AS1 98242 sc-eQTL 5.40e-01 0.0488 0.0795 0.549 NK L1
ENSG00000287510 AL137857.1 85053 sc-eQTL 3.36e-01 -0.0708 0.0733 0.549 NK L1
ENSG00000060688 SNRNP40 -480042 sc-eQTL 4.76e-01 0.0459 0.0643 0.549 Other_T L1
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 2.10e-01 0.0862 0.0686 0.549 Other_T L1
ENSG00000134644 PUM1 -249245 sc-eQTL 1.84e-01 0.0821 0.0616 0.549 Other_T L1
ENSG00000162511 LAPTM5 58972 sc-eQTL 2.23e-01 0.0617 0.0505 0.549 Other_T L1
ENSG00000162517 PEF1 -828150 sc-eQTL 7.65e-01 0.0203 0.0677 0.549 Other_T L1
ENSG00000186056 MATN1-AS1 98242 sc-eQTL 5.09e-01 0.0549 0.083 0.549 Other_T L1
ENSG00000287510 AL137857.1 85053 sc-eQTL 8.86e-01 0.0124 0.0865 0.549 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -480042 sc-eQTL 1.03e-01 0.168 0.103 0.543 B_Activated L2
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 3.96e-01 0.0887 0.104 0.543 B_Activated L2
ENSG00000134644 PUM1 -249245 sc-eQTL 9.10e-01 -0.0109 0.097 0.543 B_Activated L2
ENSG00000162510 MATN1 93161 sc-eQTL 3.00e-01 -0.0879 0.0845 0.543 B_Activated L2
ENSG00000162511 LAPTM5 58972 sc-eQTL 3.60e-01 -0.0542 0.059 0.543 B_Activated L2
ENSG00000162517 PEF1 -828150 sc-eQTL 3.35e-01 0.097 0.1 0.543 B_Activated L2
ENSG00000186056 MATN1-AS1 98242 sc-eQTL 8.40e-01 0.0193 0.0954 0.543 B_Activated L2
ENSG00000287510 AL137857.1 85053 sc-eQTL 8.88e-01 -0.0119 0.0844 0.543 B_Activated L2
ENSG00000060688 SNRNP40 -480042 sc-eQTL 4.63e-01 -0.0701 0.0953 0.549 B_Intermediate L2
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 5.36e-02 0.153 0.0788 0.549 B_Intermediate L2
ENSG00000134644 PUM1 -249245 sc-eQTL 5.44e-01 0.0455 0.0749 0.549 B_Intermediate L2
ENSG00000162510 MATN1 93161 sc-eQTL 3.41e-01 0.0743 0.0779 0.549 B_Intermediate L2
ENSG00000162511 LAPTM5 58972 sc-eQTL 8.27e-01 0.0105 0.0479 0.549 B_Intermediate L2
ENSG00000162517 PEF1 -828150 sc-eQTL 1.51e-01 -0.128 0.0885 0.549 B_Intermediate L2
ENSG00000186056 MATN1-AS1 98242 sc-eQTL 1.38e-01 0.0996 0.0669 0.549 B_Intermediate L2
ENSG00000287510 AL137857.1 85053 sc-eQTL 5.14e-01 -0.0491 0.0752 0.549 B_Intermediate L2
ENSG00000060688 SNRNP40 -480042 sc-eQTL 7.41e-01 -0.0308 0.0932 0.55 B_Memory L2
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 8.90e-01 -0.0119 0.0859 0.55 B_Memory L2
ENSG00000134644 PUM1 -249245 sc-eQTL 7.61e-01 0.0227 0.0747 0.55 B_Memory L2
ENSG00000162510 MATN1 93161 sc-eQTL 7.12e-01 -0.0264 0.0715 0.55 B_Memory L2
ENSG00000162511 LAPTM5 58972 sc-eQTL 8.80e-01 0.00954 0.0634 0.55 B_Memory L2
ENSG00000162517 PEF1 -828150 sc-eQTL 3.95e-01 -0.072 0.0845 0.55 B_Memory L2
ENSG00000186056 MATN1-AS1 98242 sc-eQTL 9.28e-02 -0.122 0.072 0.55 B_Memory L2
ENSG00000287510 AL137857.1 85053 sc-eQTL 6.02e-01 -0.0443 0.0849 0.55 B_Memory L2
ENSG00000060688 SNRNP40 -480042 sc-eQTL 3.47e-01 0.0802 0.0851 0.549 B_Naive1 L2
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 3.37e-01 0.0708 0.0735 0.549 B_Naive1 L2
ENSG00000134644 PUM1 -249245 sc-eQTL 2.58e-01 -0.0735 0.0648 0.549 B_Naive1 L2
ENSG00000162510 MATN1 93161 sc-eQTL 4.01e-01 -0.0554 0.0658 0.549 B_Naive1 L2
ENSG00000162511 LAPTM5 58972 sc-eQTL 5.46e-02 -0.0844 0.0437 0.549 B_Naive1 L2
ENSG00000162517 PEF1 -828150 sc-eQTL 9.70e-01 0.00289 0.0776 0.549 B_Naive1 L2
ENSG00000186056 MATN1-AS1 98242 sc-eQTL 8.62e-01 0.01 0.0578 0.549 B_Naive1 L2
ENSG00000287510 AL137857.1 85053 sc-eQTL 2.31e-01 -0.0855 0.0712 0.549 B_Naive1 L2
ENSG00000060688 SNRNP40 -480042 sc-eQTL 2.78e-01 0.0988 0.0908 0.549 B_Naive2 L2
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 8.47e-01 -0.0145 0.0752 0.549 B_Naive2 L2
ENSG00000134644 PUM1 -249245 sc-eQTL 9.99e-01 7.02e-05 0.0736 0.549 B_Naive2 L2
ENSG00000162510 MATN1 93161 sc-eQTL 7.05e-01 0.0268 0.0706 0.549 B_Naive2 L2
ENSG00000162511 LAPTM5 58972 sc-eQTL 3.04e-01 -0.0493 0.0478 0.549 B_Naive2 L2
ENSG00000162517 PEF1 -828150 sc-eQTL 3.70e-01 0.0783 0.0871 0.549 B_Naive2 L2
ENSG00000186056 MATN1-AS1 98242 sc-eQTL 8.01e-01 0.0176 0.0698 0.549 B_Naive2 L2
ENSG00000287510 AL137857.1 85053 sc-eQTL 8.71e-01 0.0122 0.0754 0.549 B_Naive2 L2
ENSG00000060688 SNRNP40 -480042 sc-eQTL 1.69e-01 0.124 0.09 0.55 CD4_CTL L2
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 9.40e-01 -0.00672 0.089 0.55 CD4_CTL L2
ENSG00000134644 PUM1 -249245 sc-eQTL 6.94e-02 0.158 0.0865 0.55 CD4_CTL L2
ENSG00000162511 LAPTM5 58972 sc-eQTL 4.06e-01 -0.0647 0.0777 0.55 CD4_CTL L2
ENSG00000162517 PEF1 -828150 sc-eQTL 3.91e-01 0.0685 0.0796 0.55 CD4_CTL L2
ENSG00000186056 MATN1-AS1 98242 sc-eQTL 6.37e-01 -0.0401 0.085 0.55 CD4_CTL L2
ENSG00000287510 AL137857.1 85053 sc-eQTL 4.48e-01 0.057 0.075 0.55 CD4_CTL L2
ENSG00000060688 SNRNP40 -480042 sc-eQTL 5.53e-01 -0.0423 0.0711 0.549 CD4_Naive L2
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 2.45e-01 0.0734 0.0629 0.549 CD4_Naive L2
ENSG00000134644 PUM1 -249245 sc-eQTL 3.02e-01 -0.052 0.0503 0.549 CD4_Naive L2
ENSG00000162511 LAPTM5 58972 sc-eQTL 1.94e-01 0.07 0.0538 0.549 CD4_Naive L2
ENSG00000162517 PEF1 -828150 sc-eQTL 6.94e-01 -0.0233 0.0592 0.549 CD4_Naive L2
ENSG00000186056 MATN1-AS1 98242 sc-eQTL 8.55e-01 0.01 0.0548 0.549 CD4_Naive L2
ENSG00000287510 AL137857.1 85053 sc-eQTL 7.68e-01 0.0186 0.0629 0.549 CD4_Naive L2
ENSG00000060688 SNRNP40 -480042 sc-eQTL 8.91e-01 0.0123 0.0894 0.549 CD4_TCM L2
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 8.84e-02 -0.123 0.0716 0.549 CD4_TCM L2
ENSG00000134644 PUM1 -249245 sc-eQTL 9.56e-01 -0.00349 0.0638 0.549 CD4_TCM L2
ENSG00000162511 LAPTM5 58972 sc-eQTL 1.04e-01 0.0859 0.0526 0.549 CD4_TCM L2
ENSG00000162517 PEF1 -828150 sc-eQTL 8.20e-01 -0.0162 0.071 0.549 CD4_TCM L2
ENSG00000186056 MATN1-AS1 98242 sc-eQTL 9.52e-01 0.00408 0.0672 0.549 CD4_TCM L2
ENSG00000287510 AL137857.1 85053 sc-eQTL 3.14e-01 -0.0753 0.0747 0.549 CD4_TCM L2
ENSG00000060688 SNRNP40 -480042 sc-eQTL 5.60e-01 -0.0519 0.0889 0.549 CD4_TEM L2
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 1.58e-01 0.12 0.0844 0.549 CD4_TEM L2
ENSG00000134644 PUM1 -249245 sc-eQTL 5.59e-01 0.0413 0.0706 0.549 CD4_TEM L2
ENSG00000162511 LAPTM5 58972 sc-eQTL 3.84e-01 0.0622 0.0713 0.549 CD4_TEM L2
ENSG00000162517 PEF1 -828150 sc-eQTL 9.68e-01 -0.00317 0.08 0.549 CD4_TEM L2
ENSG00000186056 MATN1-AS1 98242 sc-eQTL 1.93e-01 0.109 0.0832 0.549 CD4_TEM L2
ENSG00000287510 AL137857.1 85053 sc-eQTL 5.60e-01 -0.0481 0.0823 0.549 CD4_TEM L2
ENSG00000060688 SNRNP40 -480042 sc-eQTL 3.00e-01 0.1 0.0965 0.549 CD8_CTL L2
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 3.55e-01 0.0687 0.0741 0.549 CD8_CTL L2
ENSG00000134644 PUM1 -249245 sc-eQTL 5.53e-01 -0.0428 0.072 0.549 CD8_CTL L2
ENSG00000162511 LAPTM5 58972 sc-eQTL 8.72e-01 -0.0129 0.0798 0.549 CD8_CTL L2
ENSG00000162517 PEF1 -828150 sc-eQTL 3.27e-01 0.0681 0.0693 0.549 CD8_CTL L2
ENSG00000186056 MATN1-AS1 98242 sc-eQTL 7.79e-01 0.0235 0.0839 0.549 CD8_CTL L2
ENSG00000287510 AL137857.1 85053 sc-eQTL 9.51e-01 -0.00486 0.0789 0.549 CD8_CTL L2
ENSG00000060688 SNRNP40 -480042 sc-eQTL 5.22e-01 0.0569 0.0888 0.549 CD8_Naive L2
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 2.93e-01 0.0805 0.0764 0.549 CD8_Naive L2
ENSG00000134644 PUM1 -249245 sc-eQTL 4.66e-01 0.045 0.0616 0.549 CD8_Naive L2
ENSG00000162511 LAPTM5 58972 sc-eQTL 3.65e-01 0.0536 0.059 0.549 CD8_Naive L2
ENSG00000162517 PEF1 -828150 sc-eQTL 7.50e-01 -0.0262 0.0821 0.549 CD8_Naive L2
ENSG00000186056 MATN1-AS1 98242 sc-eQTL 2.96e-01 0.0771 0.0736 0.549 CD8_Naive L2
ENSG00000287510 AL137857.1 85053 sc-eQTL 9.51e-01 0.00493 0.0803 0.549 CD8_Naive L2
ENSG00000060688 SNRNP40 -480042 sc-eQTL 4.94e-01 -0.0668 0.0974 0.551 CD8_TCM L2
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 9.40e-01 -0.00669 0.0894 0.551 CD8_TCM L2
ENSG00000134644 PUM1 -249245 sc-eQTL 2.83e-01 -0.0903 0.0838 0.551 CD8_TCM L2
ENSG00000162511 LAPTM5 58972 sc-eQTL 8.30e-01 -0.0189 0.088 0.551 CD8_TCM L2
ENSG00000162517 PEF1 -828150 sc-eQTL 4.16e-01 -0.0731 0.0897 0.551 CD8_TCM L2
ENSG00000186056 MATN1-AS1 98242 sc-eQTL 2.32e-01 0.0972 0.0811 0.551 CD8_TCM L2
ENSG00000287510 AL137857.1 85053 sc-eQTL 2.17e-02 -0.188 0.0812 0.551 CD8_TCM L2
ENSG00000060688 SNRNP40 -480042 sc-eQTL 2.55e-01 0.105 0.0919 0.537 CD8_TEM L2
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 1.12e-01 0.14 0.0879 0.537 CD8_TEM L2
ENSG00000134644 PUM1 -249245 sc-eQTL 1.39e-02 -0.221 0.089 0.537 CD8_TEM L2
ENSG00000162511 LAPTM5 58972 sc-eQTL 6.86e-01 0.0344 0.085 0.537 CD8_TEM L2
ENSG00000162517 PEF1 -828150 sc-eQTL 4.69e-01 0.058 0.0799 0.537 CD8_TEM L2
ENSG00000186056 MATN1-AS1 98242 sc-eQTL 7.44e-01 0.0288 0.0882 0.537 CD8_TEM L2
ENSG00000287510 AL137857.1 85053 sc-eQTL 9.97e-01 -0.0003 0.0798 0.537 CD8_TEM L2
ENSG00000060688 SNRNP40 -480042 sc-eQTL 2.69e-01 0.104 0.094 0.548 MAIT L2
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 3.74e-02 0.173 0.0827 0.548 MAIT L2
ENSG00000134644 PUM1 -249245 sc-eQTL 3.17e-01 0.0801 0.0799 0.548 MAIT L2
ENSG00000162511 LAPTM5 58972 sc-eQTL 3.59e-01 0.0693 0.0754 0.548 MAIT L2
ENSG00000162517 PEF1 -828150 sc-eQTL 7.10e-02 0.15 0.0824 0.548 MAIT L2
ENSG00000186056 MATN1-AS1 98242 sc-eQTL 3.19e-01 -0.0839 0.084 0.548 MAIT L2
ENSG00000287510 AL137857.1 85053 sc-eQTL 5.05e-01 -0.0579 0.0866 0.548 MAIT L2
ENSG00000060688 SNRNP40 -480042 sc-eQTL 3.15e-01 -0.0979 0.0971 0.547 NK_CD56bright L2
ENSG00000121753 ADGRB2 -948147 sc-eQTL 8.60e-01 0.0135 0.0762 0.547 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 6.76e-01 0.0344 0.0822 0.547 NK_CD56bright L2
ENSG00000134644 PUM1 -249245 sc-eQTL 1.08e-01 0.139 0.0858 0.547 NK_CD56bright L2
ENSG00000162511 LAPTM5 58972 sc-eQTL 6.49e-01 0.0388 0.0851 0.547 NK_CD56bright L2
ENSG00000162517 PEF1 -828150 sc-eQTL 7.45e-02 -0.147 0.0821 0.547 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 98242 sc-eQTL 4.59e-02 0.17 0.0848 0.547 NK_CD56bright L2
ENSG00000287510 AL137857.1 85053 sc-eQTL 7.55e-01 -0.0263 0.0843 0.547 NK_CD56bright L2
ENSG00000060688 SNRNP40 -480042 sc-eQTL 9.78e-01 0.00252 0.0908 0.547 NK_CD56dim L2
ENSG00000121753 ADGRB2 -948147 sc-eQTL 2.50e-01 -0.092 0.0797 0.547 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 3.04e-01 0.0691 0.067 0.547 NK_CD56dim L2
ENSG00000134644 PUM1 -249245 sc-eQTL 1.83e-01 -0.0917 0.0686 0.547 NK_CD56dim L2
ENSG00000162511 LAPTM5 58972 sc-eQTL 8.73e-01 -0.0117 0.0735 0.547 NK_CD56dim L2
ENSG00000162517 PEF1 -828150 sc-eQTL 8.45e-01 -0.0128 0.0654 0.547 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 98242 sc-eQTL 9.67e-01 0.00381 0.0921 0.547 NK_CD56dim L2
ENSG00000287510 AL137857.1 85053 sc-eQTL 1.73e-01 -0.103 0.0756 0.547 NK_CD56dim L2
ENSG00000060688 SNRNP40 -480042 sc-eQTL 9.49e-01 -0.00621 0.0967 0.55 NK_HLA L2
ENSG00000121753 ADGRB2 -948147 sc-eQTL 9.31e-01 0.00668 0.0768 0.55 NK_HLA L2
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 9.56e-01 0.00478 0.0863 0.55 NK_HLA L2
ENSG00000134644 PUM1 -249245 sc-eQTL 5.19e-01 -0.0542 0.084 0.55 NK_HLA L2
ENSG00000162511 LAPTM5 58972 sc-eQTL 3.67e-01 -0.0724 0.0801 0.55 NK_HLA L2
ENSG00000162517 PEF1 -828150 sc-eQTL 1.61e-01 0.127 0.09 0.55 NK_HLA L2
ENSG00000186056 MATN1-AS1 98242 sc-eQTL 3.46e-01 0.0806 0.0852 0.55 NK_HLA L2
ENSG00000287510 AL137857.1 85053 sc-eQTL 5.70e-01 -0.047 0.0825 0.55 NK_HLA L2
ENSG00000060688 SNRNP40 -480042 sc-eQTL 3.41e-01 0.0834 0.0874 0.547 NK_cytokine L2
ENSG00000121753 ADGRB2 -948147 sc-eQTL 1.43e-01 0.116 0.0787 0.547 NK_cytokine L2
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 6.79e-01 -0.0283 0.0683 0.547 NK_cytokine L2
ENSG00000134644 PUM1 -249245 sc-eQTL 5.52e-01 0.044 0.0738 0.547 NK_cytokine L2
ENSG00000162511 LAPTM5 58972 sc-eQTL 3.27e-01 -0.0798 0.0812 0.547 NK_cytokine L2
ENSG00000162517 PEF1 -828150 sc-eQTL 3.81e-01 -0.0608 0.0692 0.547 NK_cytokine L2
ENSG00000186056 MATN1-AS1 98242 sc-eQTL 6.77e-01 0.0359 0.0862 0.547 NK_cytokine L2
ENSG00000287510 AL137857.1 85053 sc-eQTL 8.81e-01 0.012 0.0802 0.547 NK_cytokine L2
ENSG00000060688 SNRNP40 -480042 sc-eQTL 1.96e-01 0.137 0.105 0.559 PB L2
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 2.96e-01 -0.128 0.122 0.559 PB L2
ENSG00000134644 PUM1 -249245 sc-eQTL 2.25e-01 0.129 0.106 0.559 PB L2
ENSG00000162510 MATN1 93161 sc-eQTL 3.48e-01 0.0935 0.0991 0.559 PB L2
ENSG00000162511 LAPTM5 58972 sc-eQTL 4.05e-01 -0.0592 0.0709 0.559 PB L2
ENSG00000162517 PEF1 -828150 sc-eQTL 9.43e-02 0.182 0.108 0.559 PB L2
ENSG00000186056 MATN1-AS1 98242 sc-eQTL 5.81e-01 0.0539 0.0972 0.559 PB L2
ENSG00000287510 AL137857.1 85053 sc-eQTL 9.16e-01 0.011 0.104 0.559 PB L2
ENSG00000060688 SNRNP40 -480042 sc-eQTL 1.59e-01 0.0983 0.0695 0.554 Pro_T L2
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 3.10e-01 -0.0901 0.0885 0.554 Pro_T L2
ENSG00000134644 PUM1 -249245 sc-eQTL 7.08e-01 -0.031 0.0827 0.554 Pro_T L2
ENSG00000162511 LAPTM5 58972 sc-eQTL 3.33e-02 0.126 0.0587 0.554 Pro_T L2
ENSG00000162517 PEF1 -828150 sc-eQTL 2.74e-01 0.0952 0.0868 0.554 Pro_T L2
ENSG00000186056 MATN1-AS1 98242 sc-eQTL 3.79e-01 0.073 0.0828 0.554 Pro_T L2
ENSG00000287510 AL137857.1 85053 sc-eQTL 8.29e-01 -0.0165 0.0763 0.554 Pro_T L2
ENSG00000060688 SNRNP40 -480042 sc-eQTL 6.84e-01 -0.0371 0.0909 0.549 Treg L2
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 2.87e-01 -0.0936 0.0877 0.549 Treg L2
ENSG00000134644 PUM1 -249245 sc-eQTL 5.17e-01 0.0457 0.0703 0.549 Treg L2
ENSG00000162511 LAPTM5 58972 sc-eQTL 7.65e-01 -0.0241 0.0806 0.549 Treg L2
ENSG00000162517 PEF1 -828150 sc-eQTL 1.06e-01 -0.141 0.0865 0.549 Treg L2
ENSG00000186056 MATN1-AS1 98242 sc-eQTL 9.09e-01 -0.00944 0.0821 0.549 Treg L2
ENSG00000287510 AL137857.1 85053 sc-eQTL 6.01e-01 -0.0429 0.082 0.549 Treg L2
ENSG00000060688 SNRNP40 -480042 sc-eQTL 4.85e-01 0.0645 0.0921 0.541 cDC L2
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 4.47e-01 0.0759 0.0997 0.541 cDC L2
ENSG00000134644 PUM1 -249245 sc-eQTL 8.32e-01 -0.0183 0.0858 0.541 cDC L2
ENSG00000162511 LAPTM5 58972 sc-eQTL 9.66e-01 -0.00259 0.0601 0.541 cDC L2
ENSG00000162517 PEF1 -828150 sc-eQTL 5.83e-01 -0.0479 0.087 0.541 cDC L2
ENSG00000168528 SERINC2 -592819 sc-eQTL 5.90e-01 -0.0417 0.0772 0.541 cDC L2
ENSG00000284543 LINC01226 -689480 sc-eQTL 6.10e-01 0.0388 0.0758 0.541 cDC L2
ENSG00000287510 AL137857.1 85053 sc-eQTL 5.90e-02 -0.154 0.0809 0.541 cDC L2
ENSG00000060688 SNRNP40 -480042 sc-eQTL 3.24e-01 0.0726 0.0734 0.549 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 7.21e-01 0.0294 0.0821 0.549 cMono_IL1B L2
ENSG00000134644 PUM1 -249245 sc-eQTL 1.06e-02 -0.141 0.0547 0.549 cMono_IL1B L2
ENSG00000162511 LAPTM5 58972 sc-eQTL 3.33e-01 -0.0472 0.0487 0.549 cMono_IL1B L2
ENSG00000162512 SDC3 -92012 sc-eQTL 2.22e-01 0.112 0.0916 0.549 cMono_IL1B L2
ENSG00000162517 PEF1 -828150 sc-eQTL 5.96e-01 0.0398 0.075 0.549 cMono_IL1B L2
ENSG00000168528 SERINC2 -592819 sc-eQTL 4.78e-01 0.0661 0.0929 0.549 cMono_IL1B L2
ENSG00000284543 LINC01226 -689480 sc-eQTL 7.28e-01 0.0286 0.0822 0.549 cMono_IL1B L2
ENSG00000287510 AL137857.1 85053 sc-eQTL 7.56e-01 -0.0238 0.0767 0.549 cMono_IL1B L2
ENSG00000060688 SNRNP40 -480042 sc-eQTL 7.79e-01 -0.0218 0.0773 0.549 cMono_S100A L2
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 4.19e-01 -0.0738 0.0912 0.549 cMono_S100A L2
ENSG00000134644 PUM1 -249245 sc-eQTL 2.16e-01 -0.0816 0.0658 0.549 cMono_S100A L2
ENSG00000162511 LAPTM5 58972 sc-eQTL 3.93e-01 -0.0433 0.0506 0.549 cMono_S100A L2
ENSG00000162512 SDC3 -92012 sc-eQTL 6.19e-01 0.0437 0.0876 0.549 cMono_S100A L2
ENSG00000162517 PEF1 -828150 sc-eQTL 1.77e-03 0.245 0.0773 0.549 cMono_S100A L2
ENSG00000168528 SERINC2 -592819 sc-eQTL 4.06e-01 0.0772 0.0926 0.549 cMono_S100A L2
ENSG00000284543 LINC01226 -689480 sc-eQTL 9.14e-01 0.00813 0.0754 0.549 cMono_S100A L2
ENSG00000287510 AL137857.1 85053 sc-eQTL 8.51e-01 -0.0142 0.0757 0.549 cMono_S100A L2
ENSG00000060688 SNRNP40 -480042 sc-eQTL 3.57e-01 0.106 0.115 0.564 gdT L2
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 6.67e-01 -0.0427 0.0991 0.564 gdT L2
ENSG00000134644 PUM1 -249245 sc-eQTL 4.48e-02 0.204 0.101 0.564 gdT L2
ENSG00000162511 LAPTM5 58972 sc-eQTL 9.96e-01 -0.000588 0.111 0.564 gdT L2
ENSG00000162517 PEF1 -828150 sc-eQTL 5.30e-01 -0.0639 0.101 0.564 gdT L2
ENSG00000186056 MATN1-AS1 98242 sc-eQTL 4.92e-02 0.201 0.101 0.564 gdT L2
ENSG00000287510 AL137857.1 85053 sc-eQTL 4.54e-02 0.198 0.0979 0.564 gdT L2
ENSG00000060688 SNRNP40 -480042 sc-eQTL 5.70e-01 0.0486 0.0854 0.542 intMono L2
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 3.56e-01 0.0847 0.0917 0.542 intMono L2
ENSG00000134644 PUM1 -249245 sc-eQTL 9.79e-01 -0.00207 0.0779 0.542 intMono L2
ENSG00000162511 LAPTM5 58972 sc-eQTL 1.27e-01 -0.0931 0.0608 0.542 intMono L2
ENSG00000162512 SDC3 -92012 sc-eQTL 8.96e-01 0.011 0.0837 0.542 intMono L2
ENSG00000162517 PEF1 -828150 sc-eQTL 8.50e-01 0.0166 0.088 0.542 intMono L2
ENSG00000168528 SERINC2 -592819 sc-eQTL 4.76e-01 0.0626 0.0875 0.542 intMono L2
ENSG00000284543 LINC01226 -689480 sc-eQTL 1.43e-01 0.122 0.0826 0.542 intMono L2
ENSG00000287510 AL137857.1 85053 sc-eQTL 1.12e-02 -0.209 0.0818 0.542 intMono L2
ENSG00000060688 SNRNP40 -480042 sc-eQTL 8.60e-01 0.0143 0.0805 0.548 ncMono L2
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 7.78e-01 0.0242 0.0858 0.548 ncMono L2
ENSG00000134644 PUM1 -249245 sc-eQTL 8.05e-01 -0.0174 0.0702 0.548 ncMono L2
ENSG00000162511 LAPTM5 58972 sc-eQTL 2.65e-01 -0.071 0.0635 0.548 ncMono L2
ENSG00000162512 SDC3 -92012 sc-eQTL 7.46e-01 0.0231 0.0714 0.548 ncMono L2
ENSG00000162517 PEF1 -828150 sc-eQTL 7.38e-01 0.0274 0.0819 0.548 ncMono L2
ENSG00000168528 SERINC2 -592819 sc-eQTL 4.21e-01 0.0627 0.0779 0.548 ncMono L2
ENSG00000284543 LINC01226 -689480 sc-eQTL 7.11e-01 -0.0289 0.0779 0.548 ncMono L2
ENSG00000287510 AL137857.1 85053 sc-eQTL 4.85e-02 -0.159 0.08 0.548 ncMono L2
ENSG00000060688 SNRNP40 -480042 sc-eQTL 8.05e-02 0.167 0.0948 0.537 pDC L2
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 2.75e-01 0.115 0.105 0.537 pDC L2
ENSG00000134644 PUM1 -249245 sc-eQTL 8.64e-02 -0.149 0.0863 0.537 pDC L2
ENSG00000162511 LAPTM5 58972 sc-eQTL 8.52e-01 0.0151 0.081 0.537 pDC L2
ENSG00000162517 PEF1 -828150 sc-eQTL 8.24e-01 -0.0234 0.105 0.537 pDC L2
ENSG00000168528 SERINC2 -592819 sc-eQTL 6.66e-01 0.0424 0.0981 0.537 pDC L2
ENSG00000284543 LINC01226 -689480 sc-eQTL 3.46e-02 -0.16 0.0751 0.537 pDC L2
ENSG00000287510 AL137857.1 85053 sc-eQTL 7.94e-01 -0.0235 0.0896 0.537 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -480042 sc-eQTL 5.20e-01 -0.0589 0.0913 0.549 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 2.27e-01 0.0918 0.0758 0.549 B_Memory LOneK1K
ENSG00000134644 PUM1 -249245 sc-eQTL 5.24e-01 0.043 0.0674 0.549 B_Memory LOneK1K
ENSG00000162510 MATN1 93161 sc-eQTL 5.31e-01 0.0482 0.0768 0.549 B_Memory LOneK1K
ENSG00000162511 LAPTM5 58972 sc-eQTL 6.40e-01 0.0226 0.0483 0.549 B_Memory LOneK1K
ENSG00000162517 PEF1 -828150 sc-eQTL 1.17e-01 -0.125 0.0796 0.549 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 98242 sc-eQTL 2.83e-01 0.0686 0.0637 0.549 B_Memory LOneK1K
ENSG00000287510 AL137857.1 85053 sc-eQTL 6.48e-01 -0.0318 0.0696 0.549 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -480042 sc-eQTL 3.47e-01 0.0778 0.0826 0.549 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 6.04e-01 0.034 0.0654 0.549 B_Naive LOneK1K
ENSG00000134644 PUM1 -249245 sc-eQTL 3.14e-01 -0.0623 0.0618 0.549 B_Naive LOneK1K
ENSG00000162510 MATN1 93161 sc-eQTL 4.55e-01 -0.0445 0.0595 0.549 B_Naive LOneK1K
ENSG00000162511 LAPTM5 58972 sc-eQTL 8.31e-02 -0.0725 0.0417 0.549 B_Naive LOneK1K
ENSG00000162517 PEF1 -828150 sc-eQTL 6.69e-01 0.0328 0.0766 0.549 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 98242 sc-eQTL 9.72e-01 0.0019 0.0542 0.549 B_Naive LOneK1K
ENSG00000287510 AL137857.1 85053 sc-eQTL 3.13e-01 -0.0649 0.0642 0.549 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -480042 sc-eQTL 4.87e-01 0.0485 0.0696 0.549 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 8.38e-01 0.0162 0.079 0.549 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -249245 sc-eQTL 1.22e-02 -0.125 0.0496 0.549 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 58972 sc-eQTL 3.07e-01 -0.0452 0.0442 0.549 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -92012 sc-eQTL 1.55e-01 0.128 0.0899 0.549 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -828150 sc-eQTL 4.22e-02 0.129 0.0629 0.549 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -592819 sc-eQTL 4.59e-01 0.0689 0.0928 0.549 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -689480 sc-eQTL 9.55e-01 0.00431 0.0762 0.549 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 85053 sc-eQTL 6.18e-01 -0.0356 0.0713 0.549 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -480042 sc-eQTL 8.61e-01 0.0134 0.0762 0.55 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 5.17e-01 0.0541 0.0833 0.55 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -249245 sc-eQTL 9.43e-01 -0.00488 0.0683 0.55 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 58972 sc-eQTL 1.86e-01 -0.0722 0.0544 0.55 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -92012 sc-eQTL 3.71e-01 0.0715 0.0797 0.55 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -828150 sc-eQTL 3.11e-01 -0.0735 0.0724 0.55 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -592819 sc-eQTL 4.08e-01 0.0685 0.0827 0.55 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -689480 sc-eQTL 2.01e-01 0.1 0.0783 0.55 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 85053 sc-eQTL 6.29e-03 -0.213 0.0773 0.55 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -480042 sc-eQTL 6.18e-01 0.043 0.086 0.547 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -948147 sc-eQTL 9.45e-01 -0.00505 0.0733 0.547 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -480236 sc-eQTL 5.11e-01 0.0386 0.0588 0.547 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -249245 sc-eQTL 2.09e-01 -0.0809 0.0642 0.547 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 58972 sc-eQTL 6.74e-01 -0.0304 0.072 0.547 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -828150 sc-eQTL 6.65e-01 -0.0237 0.0547 0.547 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 98242 sc-eQTL 8.90e-01 0.0116 0.0831 0.547 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 85053 sc-eQTL 2.74e-01 -0.0784 0.0715 0.547 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000121766 ZCCHC17 -480236 eQTL 1.33e-03 -0.0569 0.0177 0.0 0.0 0.471
ENSG00000162511 LAPTM5 58972 eQTL 0.0315 -0.0215 0.00998 0.0 0.0 0.471
ENSG00000168528 SERINC2 -592819 eQTL 0.0104 0.0989 0.0385 0.0 0.0 0.471
ENSG00000186056 MATN1-AS1 98242 eQTL 2.52e-02 -0.0282 0.0126 0.00197 0.0 0.471

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000186056 MATN1-AS1 98242 5.68e-06 1.32e-05 6.5e-07 5.08e-06 1.87e-06 2.51e-06 1.01e-05 1.93e-06 9.97e-06 4.28e-06 1.76e-05 6.46e-06 1.86e-05 4.11e-06 2.44e-06 4.82e-06 3.68e-06 6.49e-06 1.5e-06 2.01e-06 2.66e-06 8.49e-06 5.83e-06 1.39e-06 1.57e-05 1.96e-06 3.82e-06 3.15e-06 8.17e-06 7.58e-06 8.13e-06 5.43e-07 6.12e-07 1.83e-06 2.5e-06 1.17e-06 8.96e-07 4.36e-07 9.42e-07 8.74e-07 2.38e-07 3.89e-05 9.29e-07 1.86e-07 6.22e-07 1.32e-06 7.92e-07 2.22e-07 1.79e-07