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Genes within 1Mb (chr1:30813645:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -483143 sc-eQTL 8.91e-01 0.0115 0.0835 0.344 B L1
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 3.29e-01 0.0652 0.0667 0.344 B L1
ENSG00000134644 PUM1 -252346 sc-eQTL 1.48e-01 -0.081 0.0558 0.344 B L1
ENSG00000162510 MATN1 90060 sc-eQTL 7.95e-01 0.0153 0.059 0.344 B L1
ENSG00000162511 LAPTM5 55871 sc-eQTL 9.21e-02 -0.0776 0.0459 0.344 B L1
ENSG00000162517 PEF1 -831251 sc-eQTL 1.33e-01 -0.105 0.0693 0.344 B L1
ENSG00000186056 MATN1-AS1 95141 sc-eQTL 4.40e-01 -0.0418 0.054 0.344 B L1
ENSG00000287510 AL137857.1 81952 sc-eQTL 9.52e-02 -0.107 0.0636 0.344 B L1
ENSG00000060688 SNRNP40 -483143 sc-eQTL 7.84e-01 -0.0197 0.072 0.344 CD4T L1
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 1.29e-01 0.0854 0.056 0.344 CD4T L1
ENSG00000134644 PUM1 -252346 sc-eQTL 7.47e-01 -0.0162 0.0501 0.344 CD4T L1
ENSG00000162511 LAPTM5 55871 sc-eQTL 6.49e-01 -0.0253 0.0555 0.344 CD4T L1
ENSG00000162517 PEF1 -831251 sc-eQTL 8.43e-01 -0.0115 0.0581 0.344 CD4T L1
ENSG00000186056 MATN1-AS1 95141 sc-eQTL 9.98e-01 -0.000139 0.0497 0.344 CD4T L1
ENSG00000287510 AL137857.1 81952 sc-eQTL 7.70e-01 -0.0175 0.0595 0.344 CD4T L1
ENSG00000060688 SNRNP40 -483143 sc-eQTL 5.54e-01 0.056 0.0943 0.344 CD8T L1
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 2.07e-01 0.0792 0.0626 0.344 CD8T L1
ENSG00000134644 PUM1 -252346 sc-eQTL 7.10e-01 0.0206 0.0553 0.344 CD8T L1
ENSG00000162511 LAPTM5 55871 sc-eQTL 6.29e-01 0.026 0.0537 0.344 CD8T L1
ENSG00000162517 PEF1 -831251 sc-eQTL 9.42e-01 -0.00483 0.0662 0.344 CD8T L1
ENSG00000186056 MATN1-AS1 95141 sc-eQTL 2.21e-01 -0.077 0.0627 0.344 CD8T L1
ENSG00000287510 AL137857.1 81952 sc-eQTL 5.83e-01 -0.0435 0.0791 0.344 CD8T L1
ENSG00000060688 SNRNP40 -483143 sc-eQTL 9.51e-01 0.00525 0.0851 0.338 DC L1
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 8.65e-03 0.263 0.099 0.338 DC L1
ENSG00000134644 PUM1 -252346 sc-eQTL 4.59e-01 0.0584 0.0788 0.338 DC L1
ENSG00000162511 LAPTM5 55871 sc-eQTL 7.41e-01 0.0186 0.0563 0.338 DC L1
ENSG00000162517 PEF1 -831251 sc-eQTL 5.64e-01 0.0528 0.0913 0.338 DC L1
ENSG00000168528 SERINC2 -595920 sc-eQTL 4.74e-01 -0.0666 0.0928 0.338 DC L1
ENSG00000284543 LINC01226 -692581 sc-eQTL 8.21e-01 -0.0139 0.0616 0.338 DC L1
ENSG00000287510 AL137857.1 81952 sc-eQTL 2.75e-02 -0.196 0.0881 0.338 DC L1
ENSG00000060688 SNRNP40 -483143 sc-eQTL 6.99e-01 0.0252 0.0653 0.344 Mono L1
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 4.12e-02 0.165 0.0802 0.344 Mono L1
ENSG00000134644 PUM1 -252346 sc-eQTL 1.25e-02 -0.129 0.0512 0.344 Mono L1
ENSG00000162511 LAPTM5 55871 sc-eQTL 4.64e-01 -0.035 0.0477 0.344 Mono L1
ENSG00000162512 SDC3 -95113 sc-eQTL 8.49e-01 0.0175 0.0918 0.344 Mono L1
ENSG00000162517 PEF1 -831251 sc-eQTL 1.54e-01 0.0916 0.0641 0.344 Mono L1
ENSG00000168528 SERINC2 -595920 sc-eQTL 8.82e-01 -0.0146 0.0985 0.344 Mono L1
ENSG00000284543 LINC01226 -692581 sc-eQTL 3.43e-01 0.0822 0.0866 0.344 Mono L1
ENSG00000287510 AL137857.1 81952 sc-eQTL 2.72e-02 -0.167 0.0749 0.344 Mono L1
ENSG00000060688 SNRNP40 -483143 sc-eQTL 3.93e-01 -0.0774 0.0905 0.343 NK L1
ENSG00000121753 ADGRB2 -951248 sc-eQTL 7.31e-01 -0.0269 0.078 0.343 NK L1
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 5.91e-01 0.0334 0.062 0.343 NK L1
ENSG00000134644 PUM1 -252346 sc-eQTL 1.66e-01 -0.09 0.0648 0.343 NK L1
ENSG00000162511 LAPTM5 55871 sc-eQTL 6.06e-01 0.0387 0.0749 0.343 NK L1
ENSG00000162517 PEF1 -831251 sc-eQTL 9.43e-01 -0.00394 0.0547 0.343 NK L1
ENSG00000186056 MATN1-AS1 95141 sc-eQTL 3.12e-01 -0.0851 0.084 0.343 NK L1
ENSG00000287510 AL137857.1 81952 sc-eQTL 5.13e-01 -0.0509 0.0776 0.343 NK L1
ENSG00000060688 SNRNP40 -483143 sc-eQTL 8.33e-01 0.0144 0.0682 0.344 Other_T L1
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 1.09e-01 0.117 0.0725 0.344 Other_T L1
ENSG00000134644 PUM1 -252346 sc-eQTL 8.99e-01 -0.00836 0.0656 0.344 Other_T L1
ENSG00000162511 LAPTM5 55871 sc-eQTL 7.07e-01 -0.0202 0.0537 0.344 Other_T L1
ENSG00000162517 PEF1 -831251 sc-eQTL 6.32e-01 0.0344 0.0717 0.344 Other_T L1
ENSG00000186056 MATN1-AS1 95141 sc-eQTL 7.40e-01 -0.0293 0.088 0.344 Other_T L1
ENSG00000287510 AL137857.1 81952 sc-eQTL 9.86e-01 -0.00158 0.0917 0.344 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -483143 sc-eQTL 3.58e-01 0.104 0.112 0.324 B_Activated L2
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 5.61e-01 0.0662 0.114 0.324 B_Activated L2
ENSG00000134644 PUM1 -252346 sc-eQTL 9.65e-02 -0.175 0.105 0.324 B_Activated L2
ENSG00000162510 MATN1 90060 sc-eQTL 3.59e-01 -0.0847 0.092 0.324 B_Activated L2
ENSG00000162511 LAPTM5 55871 sc-eQTL 4.85e-02 -0.126 0.0636 0.324 B_Activated L2
ENSG00000162517 PEF1 -831251 sc-eQTL 8.65e-01 0.0187 0.11 0.324 B_Activated L2
ENSG00000186056 MATN1-AS1 95141 sc-eQTL 3.29e-01 0.101 0.104 0.324 B_Activated L2
ENSG00000287510 AL137857.1 81952 sc-eQTL 3.75e-01 -0.0815 0.0917 0.324 B_Activated L2
ENSG00000060688 SNRNP40 -483143 sc-eQTL 9.24e-01 -0.00985 0.103 0.345 B_Intermediate L2
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 1.63e-01 0.12 0.0857 0.345 B_Intermediate L2
ENSG00000134644 PUM1 -252346 sc-eQTL 6.80e-01 -0.0335 0.0812 0.345 B_Intermediate L2
ENSG00000162510 MATN1 90060 sc-eQTL 2.08e-01 0.106 0.0843 0.345 B_Intermediate L2
ENSG00000162511 LAPTM5 55871 sc-eQTL 1.30e-01 -0.0785 0.0516 0.345 B_Intermediate L2
ENSG00000162517 PEF1 -831251 sc-eQTL 1.70e-01 -0.132 0.0959 0.345 B_Intermediate L2
ENSG00000186056 MATN1-AS1 95141 sc-eQTL 2.34e-01 0.0867 0.0726 0.345 B_Intermediate L2
ENSG00000287510 AL137857.1 81952 sc-eQTL 4.27e-02 -0.165 0.0807 0.345 B_Intermediate L2
ENSG00000060688 SNRNP40 -483143 sc-eQTL 7.59e-01 -0.0304 0.099 0.343 B_Memory L2
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 8.87e-01 -0.0129 0.0912 0.343 B_Memory L2
ENSG00000134644 PUM1 -252346 sc-eQTL 2.35e-01 0.0942 0.0791 0.343 B_Memory L2
ENSG00000162510 MATN1 90060 sc-eQTL 3.54e-01 -0.0705 0.0758 0.343 B_Memory L2
ENSG00000162511 LAPTM5 55871 sc-eQTL 9.19e-02 -0.113 0.0669 0.343 B_Memory L2
ENSG00000162517 PEF1 -831251 sc-eQTL 4.08e-01 -0.0744 0.0898 0.343 B_Memory L2
ENSG00000186056 MATN1-AS1 95141 sc-eQTL 7.06e-02 -0.139 0.0764 0.343 B_Memory L2
ENSG00000287510 AL137857.1 81952 sc-eQTL 2.11e-01 -0.113 0.0899 0.343 B_Memory L2
ENSG00000060688 SNRNP40 -483143 sc-eQTL 3.69e-01 0.0822 0.0913 0.344 B_Naive1 L2
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 7.42e-01 0.026 0.0789 0.344 B_Naive1 L2
ENSG00000134644 PUM1 -252346 sc-eQTL 3.18e-01 -0.0696 0.0695 0.344 B_Naive1 L2
ENSG00000162510 MATN1 90060 sc-eQTL 9.70e-01 -0.00266 0.0707 0.344 B_Naive1 L2
ENSG00000162511 LAPTM5 55871 sc-eQTL 9.10e-02 -0.0796 0.0469 0.344 B_Naive1 L2
ENSG00000162517 PEF1 -831251 sc-eQTL 6.05e-01 0.043 0.0832 0.344 B_Naive1 L2
ENSG00000186056 MATN1-AS1 95141 sc-eQTL 3.87e-01 -0.0536 0.0619 0.344 B_Naive1 L2
ENSG00000287510 AL137857.1 81952 sc-eQTL 8.68e-02 -0.131 0.076 0.344 B_Naive1 L2
ENSG00000060688 SNRNP40 -483143 sc-eQTL 9.56e-01 -0.00529 0.0968 0.343 B_Naive2 L2
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 8.95e-01 0.0106 0.0799 0.343 B_Naive2 L2
ENSG00000134644 PUM1 -252346 sc-eQTL 8.94e-01 0.0105 0.0782 0.343 B_Naive2 L2
ENSG00000162510 MATN1 90060 sc-eQTL 6.06e-01 0.0388 0.075 0.343 B_Naive2 L2
ENSG00000162511 LAPTM5 55871 sc-eQTL 1.64e-01 -0.0709 0.0507 0.343 B_Naive2 L2
ENSG00000162517 PEF1 -831251 sc-eQTL 9.24e-01 0.00882 0.0927 0.343 B_Naive2 L2
ENSG00000186056 MATN1-AS1 95141 sc-eQTL 6.03e-01 -0.0387 0.0742 0.343 B_Naive2 L2
ENSG00000287510 AL137857.1 81952 sc-eQTL 2.31e-01 -0.096 0.0799 0.343 B_Naive2 L2
ENSG00000060688 SNRNP40 -483143 sc-eQTL 4.80e-01 0.0672 0.0949 0.341 CD4_CTL L2
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 8.16e-01 0.0218 0.0935 0.341 CD4_CTL L2
ENSG00000134644 PUM1 -252346 sc-eQTL 5.35e-01 0.0569 0.0916 0.341 CD4_CTL L2
ENSG00000162511 LAPTM5 55871 sc-eQTL 3.60e-01 -0.0747 0.0815 0.341 CD4_CTL L2
ENSG00000162517 PEF1 -831251 sc-eQTL 2.42e-01 0.0981 0.0835 0.341 CD4_CTL L2
ENSG00000186056 MATN1-AS1 95141 sc-eQTL 7.59e-01 -0.0274 0.0894 0.341 CD4_CTL L2
ENSG00000287510 AL137857.1 81952 sc-eQTL 4.41e-01 0.0608 0.0788 0.341 CD4_CTL L2
ENSG00000060688 SNRNP40 -483143 sc-eQTL 1.92e-01 -0.098 0.0749 0.344 CD4_Naive L2
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 2.00e-02 0.154 0.0659 0.344 CD4_Naive L2
ENSG00000134644 PUM1 -252346 sc-eQTL 3.63e-01 -0.0485 0.0532 0.344 CD4_Naive L2
ENSG00000162511 LAPTM5 55871 sc-eQTL 5.60e-01 -0.0333 0.057 0.344 CD4_Naive L2
ENSG00000162517 PEF1 -831251 sc-eQTL 7.12e-01 -0.0231 0.0626 0.344 CD4_Naive L2
ENSG00000186056 MATN1-AS1 95141 sc-eQTL 7.62e-01 0.0176 0.0579 0.344 CD4_Naive L2
ENSG00000287510 AL137857.1 81952 sc-eQTL 2.01e-01 -0.0851 0.0663 0.344 CD4_Naive L2
ENSG00000060688 SNRNP40 -483143 sc-eQTL 1.37e-02 0.232 0.0933 0.344 CD4_TCM L2
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 9.46e-02 -0.127 0.0758 0.344 CD4_TCM L2
ENSG00000134644 PUM1 -252346 sc-eQTL 6.95e-01 -0.0265 0.0675 0.344 CD4_TCM L2
ENSG00000162511 LAPTM5 55871 sc-eQTL 6.52e-01 0.0253 0.056 0.344 CD4_TCM L2
ENSG00000162517 PEF1 -831251 sc-eQTL 4.71e-01 0.0542 0.075 0.344 CD4_TCM L2
ENSG00000186056 MATN1-AS1 95141 sc-eQTL 6.31e-01 -0.0341 0.0711 0.344 CD4_TCM L2
ENSG00000287510 AL137857.1 81952 sc-eQTL 6.38e-01 -0.0373 0.0791 0.344 CD4_TCM L2
ENSG00000060688 SNRNP40 -483143 sc-eQTL 9.83e-01 -0.00201 0.0944 0.344 CD4_TEM L2
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 4.68e-01 0.0653 0.0898 0.344 CD4_TEM L2
ENSG00000134644 PUM1 -252346 sc-eQTL 1.57e-01 0.106 0.0746 0.344 CD4_TEM L2
ENSG00000162511 LAPTM5 55871 sc-eQTL 9.86e-01 0.00134 0.0758 0.344 CD4_TEM L2
ENSG00000162517 PEF1 -831251 sc-eQTL 5.51e-01 0.0507 0.0848 0.344 CD4_TEM L2
ENSG00000186056 MATN1-AS1 95141 sc-eQTL 9.24e-01 0.00849 0.0887 0.344 CD4_TEM L2
ENSG00000287510 AL137857.1 81952 sc-eQTL 7.04e-01 -0.0332 0.0873 0.344 CD4_TEM L2
ENSG00000060688 SNRNP40 -483143 sc-eQTL 6.44e-01 0.0472 0.102 0.344 CD8_CTL L2
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 7.04e-02 0.141 0.0775 0.344 CD8_CTL L2
ENSG00000134644 PUM1 -252346 sc-eQTL 4.45e-01 -0.058 0.0758 0.344 CD8_CTL L2
ENSG00000162511 LAPTM5 55871 sc-eQTL 9.46e-02 0.14 0.0835 0.344 CD8_CTL L2
ENSG00000162517 PEF1 -831251 sc-eQTL 6.13e-02 0.137 0.0726 0.344 CD8_CTL L2
ENSG00000186056 MATN1-AS1 95141 sc-eQTL 6.36e-01 -0.0419 0.0883 0.344 CD8_CTL L2
ENSG00000287510 AL137857.1 81952 sc-eQTL 8.55e-01 0.0152 0.0831 0.344 CD8_CTL L2
ENSG00000060688 SNRNP40 -483143 sc-eQTL 9.77e-01 0.00278 0.0949 0.344 CD8_Naive L2
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 7.59e-01 0.0251 0.0818 0.344 CD8_Naive L2
ENSG00000134644 PUM1 -252346 sc-eQTL 8.35e-01 -0.0137 0.0659 0.344 CD8_Naive L2
ENSG00000162511 LAPTM5 55871 sc-eQTL 2.55e-01 -0.0718 0.0629 0.344 CD8_Naive L2
ENSG00000162517 PEF1 -831251 sc-eQTL 7.95e-01 0.0228 0.0877 0.344 CD8_Naive L2
ENSG00000186056 MATN1-AS1 95141 sc-eQTL 9.52e-01 0.00473 0.0788 0.344 CD8_Naive L2
ENSG00000287510 AL137857.1 81952 sc-eQTL 8.12e-01 0.0205 0.0858 0.344 CD8_Naive L2
ENSG00000060688 SNRNP40 -483143 sc-eQTL 6.44e-01 -0.0489 0.106 0.35 CD8_TCM L2
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 6.09e-01 -0.0496 0.0967 0.35 CD8_TCM L2
ENSG00000134644 PUM1 -252346 sc-eQTL 7.57e-01 -0.0282 0.091 0.35 CD8_TCM L2
ENSG00000162511 LAPTM5 55871 sc-eQTL 6.68e-01 0.0409 0.0952 0.35 CD8_TCM L2
ENSG00000162517 PEF1 -831251 sc-eQTL 2.71e-01 -0.107 0.097 0.35 CD8_TCM L2
ENSG00000186056 MATN1-AS1 95141 sc-eQTL 9.43e-01 -0.00631 0.0881 0.35 CD8_TCM L2
ENSG00000287510 AL137857.1 81952 sc-eQTL 3.88e-02 -0.183 0.0881 0.35 CD8_TCM L2
ENSG00000060688 SNRNP40 -483143 sc-eQTL 3.92e-01 0.0862 0.1 0.333 CD8_TEM L2
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 3.04e-01 0.0991 0.0963 0.333 CD8_TEM L2
ENSG00000134644 PUM1 -252346 sc-eQTL 8.78e-02 -0.168 0.0979 0.333 CD8_TEM L2
ENSG00000162511 LAPTM5 55871 sc-eQTL 9.61e-01 0.00458 0.0928 0.333 CD8_TEM L2
ENSG00000162517 PEF1 -831251 sc-eQTL 6.92e-01 -0.0346 0.0873 0.333 CD8_TEM L2
ENSG00000186056 MATN1-AS1 95141 sc-eQTL 1.56e-01 0.136 0.0958 0.333 CD8_TEM L2
ENSG00000287510 AL137857.1 81952 sc-eQTL 2.35e-01 -0.103 0.0868 0.333 CD8_TEM L2
ENSG00000060688 SNRNP40 -483143 sc-eQTL 5.76e-01 -0.0556 0.0993 0.34 MAIT L2
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 2.24e-04 0.32 0.0852 0.34 MAIT L2
ENSG00000134644 PUM1 -252346 sc-eQTL 7.86e-01 -0.0229 0.0843 0.34 MAIT L2
ENSG00000162511 LAPTM5 55871 sc-eQTL 3.26e-01 0.0782 0.0794 0.34 MAIT L2
ENSG00000162517 PEF1 -831251 sc-eQTL 2.22e-01 0.107 0.0871 0.34 MAIT L2
ENSG00000186056 MATN1-AS1 95141 sc-eQTL 7.09e-01 -0.0331 0.0886 0.34 MAIT L2
ENSG00000287510 AL137857.1 81952 sc-eQTL 9.27e-01 0.00843 0.0913 0.34 MAIT L2
ENSG00000060688 SNRNP40 -483143 sc-eQTL 6.53e-01 -0.0467 0.104 0.34 NK_CD56bright L2
ENSG00000121753 ADGRB2 -951248 sc-eQTL 9.10e-01 -0.00924 0.0812 0.34 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 8.91e-01 0.012 0.0876 0.34 NK_CD56bright L2
ENSG00000134644 PUM1 -252346 sc-eQTL 1.92e-01 0.12 0.0917 0.34 NK_CD56bright L2
ENSG00000162511 LAPTM5 55871 sc-eQTL 2.87e-01 0.0966 0.0905 0.34 NK_CD56bright L2
ENSG00000162517 PEF1 -831251 sc-eQTL 1.44e-01 -0.129 0.0877 0.34 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 95141 sc-eQTL 9.56e-01 -0.00503 0.0912 0.34 NK_CD56bright L2
ENSG00000287510 AL137857.1 81952 sc-eQTL 2.96e-01 -0.0939 0.0897 0.34 NK_CD56bright L2
ENSG00000060688 SNRNP40 -483143 sc-eQTL 6.73e-01 -0.0403 0.0956 0.343 NK_CD56dim L2
ENSG00000121753 ADGRB2 -951248 sc-eQTL 5.01e-01 -0.0566 0.084 0.343 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 1.96e-01 0.0914 0.0704 0.343 NK_CD56dim L2
ENSG00000134644 PUM1 -252346 sc-eQTL 1.88e-01 -0.0955 0.0722 0.343 NK_CD56dim L2
ENSG00000162511 LAPTM5 55871 sc-eQTL 8.47e-01 0.0149 0.0773 0.343 NK_CD56dim L2
ENSG00000162517 PEF1 -831251 sc-eQTL 7.19e-01 -0.0248 0.0688 0.343 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 95141 sc-eQTL 6.28e-01 -0.047 0.0968 0.343 NK_CD56dim L2
ENSG00000287510 AL137857.1 81952 sc-eQTL 2.04e-01 -0.102 0.0796 0.343 NK_CD56dim L2
ENSG00000060688 SNRNP40 -483143 sc-eQTL 2.26e-01 -0.126 0.103 0.34 NK_HLA L2
ENSG00000121753 ADGRB2 -951248 sc-eQTL 9.60e-01 0.00415 0.0823 0.34 NK_HLA L2
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 5.40e-01 -0.0567 0.0925 0.34 NK_HLA L2
ENSG00000134644 PUM1 -252346 sc-eQTL 2.79e-01 -0.0977 0.0899 0.34 NK_HLA L2
ENSG00000162511 LAPTM5 55871 sc-eQTL 9.35e-01 -0.00699 0.0861 0.34 NK_HLA L2
ENSG00000162517 PEF1 -831251 sc-eQTL 8.68e-01 -0.0162 0.097 0.34 NK_HLA L2
ENSG00000186056 MATN1-AS1 95141 sc-eQTL 4.74e-01 0.0656 0.0915 0.34 NK_HLA L2
ENSG00000287510 AL137857.1 81952 sc-eQTL 3.57e-01 -0.0817 0.0884 0.34 NK_HLA L2
ENSG00000060688 SNRNP40 -483143 sc-eQTL 8.23e-01 0.0209 0.093 0.343 NK_cytokine L2
ENSG00000121753 ADGRB2 -951248 sc-eQTL 7.28e-01 0.0292 0.084 0.343 NK_cytokine L2
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 6.27e-01 -0.0353 0.0726 0.343 NK_cytokine L2
ENSG00000134644 PUM1 -252346 sc-eQTL 6.72e-01 0.0333 0.0785 0.343 NK_cytokine L2
ENSG00000162511 LAPTM5 55871 sc-eQTL 7.30e-01 0.0299 0.0864 0.343 NK_cytokine L2
ENSG00000162517 PEF1 -831251 sc-eQTL 6.49e-01 -0.0335 0.0736 0.343 NK_cytokine L2
ENSG00000186056 MATN1-AS1 95141 sc-eQTL 2.68e-01 -0.102 0.0914 0.343 NK_cytokine L2
ENSG00000287510 AL137857.1 81952 sc-eQTL 7.23e-01 0.0303 0.0852 0.343 NK_cytokine L2
ENSG00000060688 SNRNP40 -483143 sc-eQTL 3.16e-01 0.11 0.11 0.337 PB L2
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 8.56e-01 0.0232 0.128 0.337 PB L2
ENSG00000134644 PUM1 -252346 sc-eQTL 3.73e-01 0.099 0.111 0.337 PB L2
ENSG00000162510 MATN1 90060 sc-eQTL 5.66e-01 0.0596 0.103 0.337 PB L2
ENSG00000162511 LAPTM5 55871 sc-eQTL 4.80e-01 -0.0523 0.0738 0.337 PB L2
ENSG00000162517 PEF1 -831251 sc-eQTL 1.72e-01 0.155 0.113 0.337 PB L2
ENSG00000186056 MATN1-AS1 95141 sc-eQTL 1.46e-01 0.147 0.1 0.337 PB L2
ENSG00000287510 AL137857.1 81952 sc-eQTL 2.13e-01 -0.134 0.107 0.337 PB L2
ENSG00000060688 SNRNP40 -483143 sc-eQTL 7.32e-02 0.133 0.0737 0.346 Pro_T L2
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 1.72e-01 -0.129 0.0938 0.346 Pro_T L2
ENSG00000134644 PUM1 -252346 sc-eQTL 7.00e-01 0.034 0.0879 0.346 Pro_T L2
ENSG00000162511 LAPTM5 55871 sc-eQTL 6.75e-01 0.0264 0.0631 0.346 Pro_T L2
ENSG00000162517 PEF1 -831251 sc-eQTL 2.08e-01 0.116 0.0922 0.346 Pro_T L2
ENSG00000186056 MATN1-AS1 95141 sc-eQTL 7.62e-01 -0.0267 0.0881 0.346 Pro_T L2
ENSG00000287510 AL137857.1 81952 sc-eQTL 1.22e-01 -0.125 0.0806 0.346 Pro_T L2
ENSG00000060688 SNRNP40 -483143 sc-eQTL 3.93e-01 -0.0822 0.0961 0.344 Treg L2
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 8.96e-01 -0.0122 0.0931 0.344 Treg L2
ENSG00000134644 PUM1 -252346 sc-eQTL 5.53e-01 -0.0442 0.0745 0.344 Treg L2
ENSG00000162511 LAPTM5 55871 sc-eQTL 2.55e-01 -0.0972 0.0851 0.344 Treg L2
ENSG00000162517 PEF1 -831251 sc-eQTL 2.54e-01 -0.105 0.0919 0.344 Treg L2
ENSG00000186056 MATN1-AS1 95141 sc-eQTL 3.85e-01 0.0755 0.0868 0.344 Treg L2
ENSG00000287510 AL137857.1 81952 sc-eQTL 2.27e-01 -0.105 0.0865 0.344 Treg L2
ENSG00000060688 SNRNP40 -483143 sc-eQTL 9.56e-01 -0.00551 0.1 0.339 cDC L2
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 2.41e-01 0.127 0.108 0.339 cDC L2
ENSG00000134644 PUM1 -252346 sc-eQTL 9.27e-01 0.00855 0.0932 0.339 cDC L2
ENSG00000162511 LAPTM5 55871 sc-eQTL 2.39e-01 -0.077 0.0651 0.339 cDC L2
ENSG00000162517 PEF1 -831251 sc-eQTL 6.68e-01 0.0406 0.0946 0.339 cDC L2
ENSG00000168528 SERINC2 -595920 sc-eQTL 1.91e-01 -0.11 0.0835 0.339 cDC L2
ENSG00000284543 LINC01226 -692581 sc-eQTL 2.29e-01 0.0992 0.0821 0.339 cDC L2
ENSG00000287510 AL137857.1 81952 sc-eQTL 5.95e-02 -0.167 0.0879 0.339 cDC L2
ENSG00000060688 SNRNP40 -483143 sc-eQTL 6.61e-01 0.0346 0.079 0.344 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 4.64e-01 0.0646 0.088 0.344 cMono_IL1B L2
ENSG00000134644 PUM1 -252346 sc-eQTL 2.64e-02 -0.132 0.0589 0.344 cMono_IL1B L2
ENSG00000162511 LAPTM5 55871 sc-eQTL 8.51e-01 -0.00983 0.0523 0.344 cMono_IL1B L2
ENSG00000162512 SDC3 -95113 sc-eQTL 6.58e-01 0.0437 0.0986 0.344 cMono_IL1B L2
ENSG00000162517 PEF1 -831251 sc-eQTL 9.33e-01 -0.00678 0.0806 0.344 cMono_IL1B L2
ENSG00000168528 SERINC2 -595920 sc-eQTL 7.18e-01 -0.036 0.0998 0.344 cMono_IL1B L2
ENSG00000284543 LINC01226 -692581 sc-eQTL 5.93e-01 0.0473 0.0882 0.344 cMono_IL1B L2
ENSG00000287510 AL137857.1 81952 sc-eQTL 4.98e-01 -0.0558 0.0822 0.344 cMono_IL1B L2
ENSG00000060688 SNRNP40 -483143 sc-eQTL 9.95e-01 0.000487 0.0829 0.344 cMono_S100A L2
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 2.06e-01 0.124 0.0976 0.344 cMono_S100A L2
ENSG00000134644 PUM1 -252346 sc-eQTL 3.98e-02 -0.145 0.0701 0.344 cMono_S100A L2
ENSG00000162511 LAPTM5 55871 sc-eQTL 1.91e-01 -0.0711 0.0542 0.344 cMono_S100A L2
ENSG00000162512 SDC3 -95113 sc-eQTL 9.73e-01 -0.00318 0.094 0.344 cMono_S100A L2
ENSG00000162517 PEF1 -831251 sc-eQTL 1.17e-01 0.133 0.0844 0.344 cMono_S100A L2
ENSG00000168528 SERINC2 -595920 sc-eQTL 5.07e-01 -0.0662 0.0995 0.344 cMono_S100A L2
ENSG00000284543 LINC01226 -692581 sc-eQTL 3.30e-01 0.0787 0.0807 0.344 cMono_S100A L2
ENSG00000287510 AL137857.1 81952 sc-eQTL 2.04e-01 -0.103 0.0809 0.344 cMono_S100A L2
ENSG00000060688 SNRNP40 -483143 sc-eQTL 5.21e-01 0.077 0.12 0.355 gdT L2
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 4.93e-01 -0.0706 0.103 0.355 gdT L2
ENSG00000134644 PUM1 -252346 sc-eQTL 4.21e-01 0.0855 0.106 0.355 gdT L2
ENSG00000162511 LAPTM5 55871 sc-eQTL 3.89e-02 -0.237 0.114 0.355 gdT L2
ENSG00000162517 PEF1 -831251 sc-eQTL 6.86e-01 -0.0428 0.106 0.355 gdT L2
ENSG00000186056 MATN1-AS1 95141 sc-eQTL 2.33e-01 0.127 0.106 0.355 gdT L2
ENSG00000287510 AL137857.1 81952 sc-eQTL 4.11e-01 0.0849 0.103 0.355 gdT L2
ENSG00000060688 SNRNP40 -483143 sc-eQTL 6.78e-01 0.0383 0.0921 0.342 intMono L2
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 2.62e-01 0.111 0.0988 0.342 intMono L2
ENSG00000134644 PUM1 -252346 sc-eQTL 6.81e-01 -0.0345 0.084 0.342 intMono L2
ENSG00000162511 LAPTM5 55871 sc-eQTL 7.04e-01 -0.0251 0.0659 0.342 intMono L2
ENSG00000162512 SDC3 -95113 sc-eQTL 6.36e-01 0.0428 0.0903 0.342 intMono L2
ENSG00000162517 PEF1 -831251 sc-eQTL 2.08e-01 0.119 0.0945 0.342 intMono L2
ENSG00000168528 SERINC2 -595920 sc-eQTL 5.22e-01 -0.0605 0.0944 0.342 intMono L2
ENSG00000284543 LINC01226 -692581 sc-eQTL 4.44e-01 0.0686 0.0895 0.342 intMono L2
ENSG00000287510 AL137857.1 81952 sc-eQTL 2.45e-01 -0.104 0.0893 0.342 intMono L2
ENSG00000060688 SNRNP40 -483143 sc-eQTL 6.83e-01 0.0359 0.0878 0.335 ncMono L2
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 9.83e-01 -0.00195 0.0936 0.335 ncMono L2
ENSG00000134644 PUM1 -252346 sc-eQTL 2.24e-01 -0.093 0.0762 0.335 ncMono L2
ENSG00000162511 LAPTM5 55871 sc-eQTL 6.81e-01 0.0286 0.0695 0.335 ncMono L2
ENSG00000162512 SDC3 -95113 sc-eQTL 6.09e-01 -0.0399 0.0779 0.335 ncMono L2
ENSG00000162517 PEF1 -831251 sc-eQTL 5.73e-01 0.0504 0.0893 0.335 ncMono L2
ENSG00000168528 SERINC2 -595920 sc-eQTL 9.40e-01 0.00643 0.085 0.335 ncMono L2
ENSG00000284543 LINC01226 -692581 sc-eQTL 1.14e-01 -0.134 0.0844 0.335 ncMono L2
ENSG00000287510 AL137857.1 81952 sc-eQTL 2.70e-03 -0.262 0.0861 0.335 ncMono L2
ENSG00000060688 SNRNP40 -483143 sc-eQTL 2.17e-01 0.125 0.101 0.331 pDC L2
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 4.05e-03 0.317 0.109 0.331 pDC L2
ENSG00000134644 PUM1 -252346 sc-eQTL 7.12e-01 0.0342 0.0924 0.331 pDC L2
ENSG00000162511 LAPTM5 55871 sc-eQTL 2.16e-01 0.106 0.0855 0.331 pDC L2
ENSG00000162517 PEF1 -831251 sc-eQTL 6.30e-01 0.0538 0.111 0.331 pDC L2
ENSG00000168528 SERINC2 -595920 sc-eQTL 7.09e-01 0.039 0.104 0.331 pDC L2
ENSG00000284543 LINC01226 -692581 sc-eQTL 6.88e-01 -0.0326 0.0809 0.331 pDC L2
ENSG00000287510 AL137857.1 81952 sc-eQTL 9.17e-01 0.00993 0.0952 0.331 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -483143 sc-eQTL 5.02e-01 -0.0656 0.0975 0.344 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 2.90e-01 0.086 0.081 0.344 B_Memory LOneK1K
ENSG00000134644 PUM1 -252346 sc-eQTL 9.63e-01 -0.00331 0.072 0.344 B_Memory LOneK1K
ENSG00000162510 MATN1 90060 sc-eQTL 8.64e-01 0.0141 0.0821 0.344 B_Memory LOneK1K
ENSG00000162511 LAPTM5 55871 sc-eQTL 5.08e-02 -0.1 0.0511 0.344 B_Memory LOneK1K
ENSG00000162517 PEF1 -831251 sc-eQTL 1.06e-01 -0.138 0.0849 0.344 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 95141 sc-eQTL 5.92e-01 0.0366 0.0682 0.344 B_Memory LOneK1K
ENSG00000287510 AL137857.1 81952 sc-eQTL 1.50e-01 -0.107 0.074 0.344 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -483143 sc-eQTL 9.85e-01 -0.00164 0.0889 0.344 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 6.99e-01 0.0272 0.0702 0.344 B_Naive LOneK1K
ENSG00000134644 PUM1 -252346 sc-eQTL 2.86e-01 -0.0709 0.0663 0.344 B_Naive LOneK1K
ENSG00000162510 MATN1 90060 sc-eQTL 9.72e-01 0.00223 0.064 0.344 B_Naive LOneK1K
ENSG00000162511 LAPTM5 55871 sc-eQTL 1.53e-01 -0.0642 0.0448 0.344 B_Naive LOneK1K
ENSG00000162517 PEF1 -831251 sc-eQTL 8.26e-01 0.0181 0.0823 0.344 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 95141 sc-eQTL 1.82e-01 -0.0776 0.0579 0.344 B_Naive LOneK1K
ENSG00000287510 AL137857.1 81952 sc-eQTL 1.04e-01 -0.112 0.0687 0.344 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -483143 sc-eQTL 6.30e-01 0.036 0.0747 0.344 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 1.26e-01 0.129 0.0842 0.344 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -252346 sc-eQTL 4.88e-03 -0.151 0.053 0.344 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 55871 sc-eQTL 4.14e-01 -0.0388 0.0474 0.344 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -95113 sc-eQTL 9.60e-01 0.0049 0.0969 0.344 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -831251 sc-eQTL 4.70e-01 0.0492 0.068 0.344 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -595920 sc-eQTL 6.97e-01 -0.0389 0.0996 0.344 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -692581 sc-eQTL 3.16e-01 0.0819 0.0815 0.344 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 81952 sc-eQTL 2.06e-01 -0.0966 0.0762 0.344 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -483143 sc-eQTL 7.85e-01 0.0225 0.0824 0.343 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 1.24e-01 0.139 0.0897 0.343 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -252346 sc-eQTL 2.30e-01 -0.0886 0.0736 0.343 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 55871 sc-eQTL 9.48e-01 -0.00383 0.0591 0.343 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -95113 sc-eQTL 5.22e-01 0.0553 0.0862 0.343 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -831251 sc-eQTL 5.39e-01 0.0482 0.0784 0.343 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -595920 sc-eQTL 7.64e-01 -0.0269 0.0895 0.343 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -692581 sc-eQTL 4.72e-01 0.0611 0.0849 0.343 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 81952 sc-eQTL 1.21e-02 -0.212 0.0838 0.343 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -483143 sc-eQTL 4.96e-01 -0.062 0.0911 0.343 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -951248 sc-eQTL 7.86e-01 -0.0212 0.0777 0.343 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -483337 sc-eQTL 5.48e-01 0.0374 0.0622 0.343 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -252346 sc-eQTL 1.76e-01 -0.0922 0.0679 0.343 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 55871 sc-eQTL 7.89e-01 0.0204 0.0763 0.343 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -831251 sc-eQTL 9.19e-01 -0.00593 0.0579 0.343 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 95141 sc-eQTL 3.61e-01 -0.0803 0.0878 0.343 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 81952 sc-eQTL 4.43e-01 -0.0582 0.0758 0.343 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000121766 ZCCHC17 -483337 eQTL 4.02e-02 -0.0402 0.0196 0.0 0.0 0.313

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000121766 ZCCHC17 -483337 3.14e-07 1.5e-07 5.35e-08 2.05e-07 1.01e-07 8.33e-08 1.9e-07 5.53e-08 1.47e-07 6.08e-08 1.57e-07 1.05e-07 1.71e-07 7.95e-08 6.25e-08 7.97e-08 4.12e-08 1.51e-07 6.92e-08 4.78e-08 1.25e-07 1.25e-07 1.58e-07 2.83e-08 1.85e-07 1.26e-07 1.12e-07 1.01e-07 1.22e-07 1e-07 1.07e-07 3.6e-08 3.89e-08 8.89e-08 3.63e-08 3.05e-08 4.62e-08 8.71e-08 6.71e-08 3.82e-08 5.44e-08 1.52e-07 3.19e-08 7.24e-09 3.41e-08 1.89e-08 1.2e-07 1.89e-09 5.01e-08