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Genes within 1Mb (chr1:30810045:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -486743 sc-eQTL 9.85e-01 -0.00266 0.144 0.915 B L1
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 9.89e-01 -0.00161 0.115 0.915 B L1
ENSG00000134644 PUM1 -255946 sc-eQTL 6.12e-01 0.049 0.0965 0.915 B L1
ENSG00000162510 MATN1 86460 sc-eQTL 9.62e-01 0.00482 0.102 0.915 B L1
ENSG00000162511 LAPTM5 52271 sc-eQTL 3.35e-01 -0.0766 0.0794 0.915 B L1
ENSG00000162517 PEF1 -834851 sc-eQTL 6.32e-01 -0.0575 0.12 0.915 B L1
ENSG00000186056 MATN1-AS1 91541 sc-eQTL 8.82e-01 0.0138 0.0932 0.915 B L1
ENSG00000287510 AL137857.1 78352 sc-eQTL 4.73e-01 0.0792 0.11 0.915 B L1
ENSG00000060688 SNRNP40 -486743 sc-eQTL 3.86e-01 0.106 0.122 0.915 CD4T L1
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 9.32e-01 0.00823 0.0957 0.915 CD4T L1
ENSG00000134644 PUM1 -255946 sc-eQTL 4.36e-01 -0.0664 0.0851 0.915 CD4T L1
ENSG00000162511 LAPTM5 52271 sc-eQTL 1.16e-01 0.148 0.0939 0.915 CD4T L1
ENSG00000162517 PEF1 -834851 sc-eQTL 1.24e-01 0.152 0.0982 0.915 CD4T L1
ENSG00000186056 MATN1-AS1 91541 sc-eQTL 3.11e-01 0.0856 0.0843 0.915 CD4T L1
ENSG00000287510 AL137857.1 78352 sc-eQTL 5.02e-01 0.0679 0.101 0.915 CD4T L1
ENSG00000060688 SNRNP40 -486743 sc-eQTL 8.97e-01 0.0211 0.163 0.915 CD8T L1
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 1.48e-01 -0.157 0.108 0.915 CD8T L1
ENSG00000134644 PUM1 -255946 sc-eQTL 9.75e-01 0.00302 0.0956 0.915 CD8T L1
ENSG00000162511 LAPTM5 52271 sc-eQTL 3.52e-01 0.0864 0.0927 0.915 CD8T L1
ENSG00000162517 PEF1 -834851 sc-eQTL 5.27e-01 0.0724 0.114 0.915 CD8T L1
ENSG00000186056 MATN1-AS1 91541 sc-eQTL 1.04e-01 0.177 0.108 0.915 CD8T L1
ENSG00000287510 AL137857.1 78352 sc-eQTL 5.32e-01 -0.0856 0.137 0.915 CD8T L1
ENSG00000060688 SNRNP40 -486743 sc-eQTL 9.66e-01 -0.00627 0.149 0.919 DC L1
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 1.06e-01 0.284 0.175 0.919 DC L1
ENSG00000134644 PUM1 -255946 sc-eQTL 9.47e-01 0.00915 0.138 0.919 DC L1
ENSG00000162511 LAPTM5 52271 sc-eQTL 1.35e-01 -0.147 0.098 0.919 DC L1
ENSG00000162517 PEF1 -834851 sc-eQTL 4.03e-01 0.134 0.159 0.919 DC L1
ENSG00000168528 SERINC2 -599520 sc-eQTL 6.88e-01 0.0653 0.162 0.919 DC L1
ENSG00000284543 LINC01226 -696181 sc-eQTL 1.51e-01 -0.154 0.107 0.919 DC L1
ENSG00000287510 AL137857.1 78352 sc-eQTL 7.34e-01 0.0529 0.156 0.919 DC L1
ENSG00000060688 SNRNP40 -486743 sc-eQTL 7.28e-01 -0.0393 0.113 0.915 Mono L1
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 7.31e-02 -0.25 0.139 0.915 Mono L1
ENSG00000134644 PUM1 -255946 sc-eQTL 3.51e-01 -0.0838 0.0896 0.915 Mono L1
ENSG00000162511 LAPTM5 52271 sc-eQTL 3.11e-01 -0.0837 0.0824 0.915 Mono L1
ENSG00000162512 SDC3 -98713 sc-eQTL 9.67e-01 -0.00661 0.159 0.915 Mono L1
ENSG00000162517 PEF1 -834851 sc-eQTL 5.23e-01 -0.0712 0.111 0.915 Mono L1
ENSG00000168528 SERINC2 -599520 sc-eQTL 5.19e-03 0.472 0.167 0.915 Mono L1
ENSG00000284543 LINC01226 -696181 sc-eQTL 4.82e-01 0.105 0.15 0.915 Mono L1
ENSG00000287510 AL137857.1 78352 sc-eQTL 3.18e-01 -0.131 0.131 0.915 Mono L1
ENSG00000060688 SNRNP40 -486743 sc-eQTL 2.60e-01 0.177 0.157 0.914 NK L1
ENSG00000121753 ADGRB2 -954848 sc-eQTL 4.75e-01 0.0969 0.135 0.914 NK L1
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 3.10e-01 -0.109 0.107 0.914 NK L1
ENSG00000134644 PUM1 -255946 sc-eQTL 1.58e-01 -0.159 0.112 0.914 NK L1
ENSG00000162511 LAPTM5 52271 sc-eQTL 5.92e-01 0.0698 0.13 0.914 NK L1
ENSG00000162517 PEF1 -834851 sc-eQTL 1.67e-01 0.131 0.0945 0.914 NK L1
ENSG00000186056 MATN1-AS1 91541 sc-eQTL 2.87e-01 0.155 0.146 0.914 NK L1
ENSG00000287510 AL137857.1 78352 sc-eQTL 7.71e-01 -0.0393 0.135 0.914 NK L1
ENSG00000060688 SNRNP40 -486743 sc-eQTL 2.90e-02 0.258 0.117 0.915 Other_T L1
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 3.87e-01 -0.11 0.127 0.915 Other_T L1
ENSG00000134644 PUM1 -255946 sc-eQTL 6.30e-01 -0.0551 0.114 0.915 Other_T L1
ENSG00000162511 LAPTM5 52271 sc-eQTL 4.32e-01 0.0735 0.0934 0.915 Other_T L1
ENSG00000162517 PEF1 -834851 sc-eQTL 4.63e-01 -0.0917 0.125 0.915 Other_T L1
ENSG00000186056 MATN1-AS1 91541 sc-eQTL 5.08e-01 0.101 0.153 0.915 Other_T L1
ENSG00000287510 AL137857.1 78352 sc-eQTL 2.72e-01 0.175 0.159 0.915 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -486743 sc-eQTL 1.15e-01 0.293 0.185 0.911 B_Activated L2
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 1.44e-01 0.273 0.187 0.911 B_Activated L2
ENSG00000134644 PUM1 -255946 sc-eQTL 2.56e-01 -0.198 0.174 0.911 B_Activated L2
ENSG00000162510 MATN1 86460 sc-eQTL 4.91e-01 0.105 0.152 0.911 B_Activated L2
ENSG00000162511 LAPTM5 52271 sc-eQTL 4.83e-01 -0.0747 0.106 0.911 B_Activated L2
ENSG00000162517 PEF1 -834851 sc-eQTL 9.45e-01 0.0125 0.181 0.911 B_Activated L2
ENSG00000186056 MATN1-AS1 91541 sc-eQTL 8.44e-01 -0.0339 0.172 0.911 B_Activated L2
ENSG00000287510 AL137857.1 78352 sc-eQTL 5.61e-01 -0.0884 0.152 0.911 B_Activated L2
ENSG00000060688 SNRNP40 -486743 sc-eQTL 3.65e-01 0.163 0.18 0.914 B_Intermediate L2
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 7.97e-01 0.0386 0.15 0.914 B_Intermediate L2
ENSG00000134644 PUM1 -255946 sc-eQTL 2.62e-01 0.159 0.141 0.914 B_Intermediate L2
ENSG00000162510 MATN1 86460 sc-eQTL 7.50e-01 -0.047 0.147 0.914 B_Intermediate L2
ENSG00000162511 LAPTM5 52271 sc-eQTL 7.87e-01 -0.0245 0.0905 0.914 B_Intermediate L2
ENSG00000162517 PEF1 -834851 sc-eQTL 4.28e-01 -0.133 0.168 0.914 B_Intermediate L2
ENSG00000186056 MATN1-AS1 91541 sc-eQTL 4.22e-01 0.102 0.127 0.914 B_Intermediate L2
ENSG00000287510 AL137857.1 78352 sc-eQTL 8.66e-01 0.0239 0.142 0.914 B_Intermediate L2
ENSG00000060688 SNRNP40 -486743 sc-eQTL 9.58e-01 -0.00918 0.173 0.918 B_Memory L2
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 5.95e-01 -0.0847 0.159 0.918 B_Memory L2
ENSG00000134644 PUM1 -255946 sc-eQTL 7.98e-01 -0.0355 0.139 0.918 B_Memory L2
ENSG00000162510 MATN1 86460 sc-eQTL 4.49e-01 0.1 0.132 0.918 B_Memory L2
ENSG00000162511 LAPTM5 52271 sc-eQTL 6.87e-01 -0.0474 0.118 0.918 B_Memory L2
ENSG00000162517 PEF1 -834851 sc-eQTL 1.62e-01 -0.219 0.156 0.918 B_Memory L2
ENSG00000186056 MATN1-AS1 91541 sc-eQTL 5.46e-01 -0.0812 0.134 0.918 B_Memory L2
ENSG00000287510 AL137857.1 78352 sc-eQTL 3.92e-01 -0.135 0.157 0.918 B_Memory L2
ENSG00000060688 SNRNP40 -486743 sc-eQTL 7.35e-01 -0.0523 0.154 0.915 B_Naive1 L2
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 2.87e-01 -0.142 0.133 0.915 B_Naive1 L2
ENSG00000134644 PUM1 -255946 sc-eQTL 4.39e-01 0.0909 0.117 0.915 B_Naive1 L2
ENSG00000162510 MATN1 86460 sc-eQTL 8.20e-01 0.0271 0.119 0.915 B_Naive1 L2
ENSG00000162511 LAPTM5 52271 sc-eQTL 7.13e-01 -0.0293 0.0795 0.915 B_Naive1 L2
ENSG00000162517 PEF1 -834851 sc-eQTL 3.54e-01 0.13 0.14 0.915 B_Naive1 L2
ENSG00000186056 MATN1-AS1 91541 sc-eQTL 1.00e+00 -6.06e-05 0.105 0.915 B_Naive1 L2
ENSG00000287510 AL137857.1 78352 sc-eQTL 8.22e-01 -0.0291 0.129 0.915 B_Naive1 L2
ENSG00000060688 SNRNP40 -486743 sc-eQTL 5.10e-01 0.109 0.166 0.916 B_Naive2 L2
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 7.70e-01 0.04 0.137 0.916 B_Naive2 L2
ENSG00000134644 PUM1 -255946 sc-eQTL 8.79e-01 -0.0203 0.134 0.916 B_Naive2 L2
ENSG00000162510 MATN1 86460 sc-eQTL 1.74e-01 0.175 0.128 0.916 B_Naive2 L2
ENSG00000162511 LAPTM5 52271 sc-eQTL 8.96e-01 -0.0114 0.0873 0.916 B_Naive2 L2
ENSG00000162517 PEF1 -834851 sc-eQTL 4.15e-01 0.13 0.158 0.916 B_Naive2 L2
ENSG00000186056 MATN1-AS1 91541 sc-eQTL 6.18e-01 0.0634 0.127 0.916 B_Naive2 L2
ENSG00000287510 AL137857.1 78352 sc-eQTL 4.80e-02 0.27 0.136 0.916 B_Naive2 L2
ENSG00000060688 SNRNP40 -486743 sc-eQTL 2.36e-01 0.198 0.167 0.916 CD4_CTL L2
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 6.36e-01 -0.0779 0.164 0.916 CD4_CTL L2
ENSG00000134644 PUM1 -255946 sc-eQTL 4.54e-01 0.121 0.161 0.916 CD4_CTL L2
ENSG00000162511 LAPTM5 52271 sc-eQTL 5.91e-01 0.0774 0.144 0.916 CD4_CTL L2
ENSG00000162517 PEF1 -834851 sc-eQTL 9.36e-03 0.38 0.145 0.916 CD4_CTL L2
ENSG00000186056 MATN1-AS1 91541 sc-eQTL 3.22e-01 0.156 0.157 0.916 CD4_CTL L2
ENSG00000287510 AL137857.1 78352 sc-eQTL 7.34e-01 -0.0472 0.139 0.916 CD4_CTL L2
ENSG00000060688 SNRNP40 -486743 sc-eQTL 8.14e-01 -0.0303 0.128 0.915 CD4_Naive L2
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 6.81e-01 0.0467 0.114 0.915 CD4_Naive L2
ENSG00000134644 PUM1 -255946 sc-eQTL 3.69e-01 -0.0815 0.0906 0.915 CD4_Naive L2
ENSG00000162511 LAPTM5 52271 sc-eQTL 1.49e-01 0.14 0.0968 0.915 CD4_Naive L2
ENSG00000162517 PEF1 -834851 sc-eQTL 6.28e-01 0.0518 0.107 0.915 CD4_Naive L2
ENSG00000186056 MATN1-AS1 91541 sc-eQTL 9.60e-01 -0.00497 0.0987 0.915 CD4_Naive L2
ENSG00000287510 AL137857.1 78352 sc-eQTL 7.65e-01 0.034 0.113 0.915 CD4_Naive L2
ENSG00000060688 SNRNP40 -486743 sc-eQTL 5.29e-01 0.102 0.163 0.915 CD4_TCM L2
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 2.35e-01 -0.156 0.131 0.915 CD4_TCM L2
ENSG00000134644 PUM1 -255946 sc-eQTL 6.73e-01 -0.049 0.116 0.915 CD4_TCM L2
ENSG00000162511 LAPTM5 52271 sc-eQTL 7.41e-02 0.172 0.0956 0.915 CD4_TCM L2
ENSG00000162517 PEF1 -834851 sc-eQTL 2.36e-02 0.291 0.128 0.915 CD4_TCM L2
ENSG00000186056 MATN1-AS1 91541 sc-eQTL 7.77e-01 0.0346 0.122 0.915 CD4_TCM L2
ENSG00000287510 AL137857.1 78352 sc-eQTL 5.84e-01 0.0745 0.136 0.915 CD4_TCM L2
ENSG00000060688 SNRNP40 -486743 sc-eQTL 3.12e-01 0.163 0.161 0.915 CD4_TEM L2
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 2.66e-01 0.171 0.153 0.915 CD4_TEM L2
ENSG00000134644 PUM1 -255946 sc-eQTL 9.66e-01 -0.00542 0.128 0.915 CD4_TEM L2
ENSG00000162511 LAPTM5 52271 sc-eQTL 2.29e-01 0.156 0.129 0.915 CD4_TEM L2
ENSG00000162517 PEF1 -834851 sc-eQTL 2.21e-01 0.178 0.145 0.915 CD4_TEM L2
ENSG00000186056 MATN1-AS1 91541 sc-eQTL 7.55e-02 0.269 0.151 0.915 CD4_TEM L2
ENSG00000287510 AL137857.1 78352 sc-eQTL 9.32e-01 0.0128 0.149 0.915 CD4_TEM L2
ENSG00000060688 SNRNP40 -486743 sc-eQTL 1.41e-01 0.259 0.175 0.915 CD8_CTL L2
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 5.99e-02 -0.253 0.134 0.915 CD8_CTL L2
ENSG00000134644 PUM1 -255946 sc-eQTL 7.48e-01 0.0422 0.131 0.915 CD8_CTL L2
ENSG00000162511 LAPTM5 52271 sc-eQTL 5.39e-01 -0.0892 0.145 0.915 CD8_CTL L2
ENSG00000162517 PEF1 -834851 sc-eQTL 2.98e-02 0.273 0.125 0.915 CD8_CTL L2
ENSG00000186056 MATN1-AS1 91541 sc-eQTL 8.92e-01 -0.0207 0.153 0.915 CD8_CTL L2
ENSG00000287510 AL137857.1 78352 sc-eQTL 4.45e-01 0.11 0.143 0.915 CD8_CTL L2
ENSG00000060688 SNRNP40 -486743 sc-eQTL 9.71e-01 -0.00602 0.163 0.915 CD8_Naive L2
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 4.29e-01 -0.111 0.141 0.915 CD8_Naive L2
ENSG00000134644 PUM1 -255946 sc-eQTL 8.88e-01 0.016 0.113 0.915 CD8_Naive L2
ENSG00000162511 LAPTM5 52271 sc-eQTL 5.80e-01 0.0602 0.109 0.915 CD8_Naive L2
ENSG00000162517 PEF1 -834851 sc-eQTL 7.29e-01 -0.0524 0.151 0.915 CD8_Naive L2
ENSG00000186056 MATN1-AS1 91541 sc-eQTL 4.62e-02 0.269 0.134 0.915 CD8_Naive L2
ENSG00000287510 AL137857.1 78352 sc-eQTL 3.44e-01 -0.14 0.147 0.915 CD8_Naive L2
ENSG00000060688 SNRNP40 -486743 sc-eQTL 5.89e-01 -0.0992 0.183 0.919 CD8_TCM L2
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 2.60e-01 -0.189 0.168 0.919 CD8_TCM L2
ENSG00000134644 PUM1 -255946 sc-eQTL 8.55e-02 -0.271 0.157 0.919 CD8_TCM L2
ENSG00000162511 LAPTM5 52271 sc-eQTL 8.57e-01 0.0298 0.165 0.919 CD8_TCM L2
ENSG00000162517 PEF1 -834851 sc-eQTL 7.94e-01 -0.0443 0.169 0.919 CD8_TCM L2
ENSG00000186056 MATN1-AS1 91541 sc-eQTL 3.49e-02 0.322 0.151 0.919 CD8_TCM L2
ENSG00000287510 AL137857.1 78352 sc-eQTL 6.26e-02 -0.287 0.153 0.919 CD8_TCM L2
ENSG00000060688 SNRNP40 -486743 sc-eQTL 7.85e-01 0.0476 0.174 0.916 CD8_TEM L2
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 8.10e-01 0.0403 0.167 0.916 CD8_TEM L2
ENSG00000134644 PUM1 -255946 sc-eQTL 1.17e-01 -0.267 0.17 0.916 CD8_TEM L2
ENSG00000162511 LAPTM5 52271 sc-eQTL 6.11e-01 0.0816 0.16 0.916 CD8_TEM L2
ENSG00000162517 PEF1 -834851 sc-eQTL 5.36e-01 0.0934 0.151 0.916 CD8_TEM L2
ENSG00000186056 MATN1-AS1 91541 sc-eQTL 7.77e-01 0.0473 0.166 0.916 CD8_TEM L2
ENSG00000287510 AL137857.1 78352 sc-eQTL 6.95e-01 0.0592 0.151 0.916 CD8_TEM L2
ENSG00000060688 SNRNP40 -486743 sc-eQTL 5.96e-01 0.092 0.173 0.918 MAIT L2
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 7.68e-01 -0.0453 0.154 0.918 MAIT L2
ENSG00000134644 PUM1 -255946 sc-eQTL 3.72e-01 0.132 0.147 0.918 MAIT L2
ENSG00000162511 LAPTM5 52271 sc-eQTL 4.62e-01 0.102 0.139 0.918 MAIT L2
ENSG00000162517 PEF1 -834851 sc-eQTL 4.49e-01 -0.116 0.152 0.918 MAIT L2
ENSG00000186056 MATN1-AS1 91541 sc-eQTL 1.80e-01 0.207 0.154 0.918 MAIT L2
ENSG00000287510 AL137857.1 78352 sc-eQTL 5.22e-01 -0.102 0.159 0.918 MAIT L2
ENSG00000060688 SNRNP40 -486743 sc-eQTL 6.13e-01 -0.0898 0.177 0.911 NK_CD56bright L2
ENSG00000121753 ADGRB2 -954848 sc-eQTL 5.34e-01 -0.0863 0.139 0.911 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 8.90e-01 -0.0208 0.15 0.911 NK_CD56bright L2
ENSG00000134644 PUM1 -255946 sc-eQTL 7.70e-01 -0.046 0.157 0.911 NK_CD56bright L2
ENSG00000162511 LAPTM5 52271 sc-eQTL 9.58e-01 -0.00815 0.155 0.911 NK_CD56bright L2
ENSG00000162517 PEF1 -834851 sc-eQTL 2.19e-01 0.185 0.15 0.911 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 91541 sc-eQTL 1.54e-01 0.222 0.155 0.911 NK_CD56bright L2
ENSG00000287510 AL137857.1 78352 sc-eQTL 7.20e-01 0.0551 0.154 0.911 NK_CD56bright L2
ENSG00000060688 SNRNP40 -486743 sc-eQTL 2.33e-01 0.196 0.164 0.914 NK_CD56dim L2
ENSG00000121753 ADGRB2 -954848 sc-eQTL 5.66e-01 0.0831 0.145 0.914 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 8.32e-01 -0.0259 0.122 0.914 NK_CD56dim L2
ENSG00000134644 PUM1 -255946 sc-eQTL 1.83e-01 -0.166 0.124 0.914 NK_CD56dim L2
ENSG00000162511 LAPTM5 52271 sc-eQTL 6.27e-01 0.0649 0.133 0.914 NK_CD56dim L2
ENSG00000162517 PEF1 -834851 sc-eQTL 2.12e-01 0.148 0.118 0.914 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 91541 sc-eQTL 6.23e-01 -0.0821 0.167 0.914 NK_CD56dim L2
ENSG00000287510 AL137857.1 78352 sc-eQTL 9.09e-01 0.0157 0.138 0.914 NK_CD56dim L2
ENSG00000060688 SNRNP40 -486743 sc-eQTL 5.43e-01 -0.104 0.171 0.909 NK_HLA L2
ENSG00000121753 ADGRB2 -954848 sc-eQTL 6.77e-01 0.0569 0.136 0.909 NK_HLA L2
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 5.91e-01 -0.0823 0.153 0.909 NK_HLA L2
ENSG00000134644 PUM1 -255946 sc-eQTL 1.27e-01 -0.227 0.148 0.909 NK_HLA L2
ENSG00000162511 LAPTM5 52271 sc-eQTL 3.22e-01 -0.141 0.142 0.909 NK_HLA L2
ENSG00000162517 PEF1 -834851 sc-eQTL 1.12e-02 0.404 0.158 0.909 NK_HLA L2
ENSG00000186056 MATN1-AS1 91541 sc-eQTL 9.60e-01 -0.00766 0.152 0.909 NK_HLA L2
ENSG00000287510 AL137857.1 78352 sc-eQTL 4.02e-01 -0.123 0.146 0.909 NK_HLA L2
ENSG00000060688 SNRNP40 -486743 sc-eQTL 1.08e-01 0.261 0.161 0.914 NK_cytokine L2
ENSG00000121753 ADGRB2 -954848 sc-eQTL 3.09e-01 0.149 0.146 0.914 NK_cytokine L2
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 3.00e-01 -0.131 0.126 0.914 NK_cytokine L2
ENSG00000134644 PUM1 -255946 sc-eQTL 5.82e-01 -0.0755 0.137 0.914 NK_cytokine L2
ENSG00000162511 LAPTM5 52271 sc-eQTL 7.91e-01 0.04 0.151 0.914 NK_cytokine L2
ENSG00000162517 PEF1 -834851 sc-eQTL 6.06e-01 -0.0664 0.128 0.914 NK_cytokine L2
ENSG00000186056 MATN1-AS1 91541 sc-eQTL 3.22e-01 0.158 0.159 0.914 NK_cytokine L2
ENSG00000287510 AL137857.1 78352 sc-eQTL 8.33e-01 0.0314 0.149 0.914 NK_cytokine L2
ENSG00000060688 SNRNP40 -486743 sc-eQTL 6.85e-01 0.0724 0.178 0.896 PB L2
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 2.97e-01 -0.216 0.206 0.896 PB L2
ENSG00000134644 PUM1 -255946 sc-eQTL 1.28e-01 0.273 0.178 0.896 PB L2
ENSG00000162510 MATN1 86460 sc-eQTL 7.67e-01 -0.0496 0.167 0.896 PB L2
ENSG00000162511 LAPTM5 52271 sc-eQTL 1.86e-01 -0.158 0.119 0.896 PB L2
ENSG00000162517 PEF1 -834851 sc-eQTL 6.37e-01 0.0871 0.184 0.896 PB L2
ENSG00000186056 MATN1-AS1 91541 sc-eQTL 5.86e-01 -0.0893 0.163 0.896 PB L2
ENSG00000287510 AL137857.1 78352 sc-eQTL 3.73e-02 0.36 0.171 0.896 PB L2
ENSG00000060688 SNRNP40 -486743 sc-eQTL 9.49e-01 0.0082 0.128 0.915 Pro_T L2
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 5.03e-01 -0.109 0.162 0.915 Pro_T L2
ENSG00000134644 PUM1 -255946 sc-eQTL 7.89e-02 -0.265 0.15 0.915 Pro_T L2
ENSG00000162511 LAPTM5 52271 sc-eQTL 9.07e-02 0.183 0.108 0.915 Pro_T L2
ENSG00000162517 PEF1 -834851 sc-eQTL 1.59e-01 0.224 0.159 0.915 Pro_T L2
ENSG00000186056 MATN1-AS1 91541 sc-eQTL 7.93e-01 0.0399 0.152 0.915 Pro_T L2
ENSG00000287510 AL137857.1 78352 sc-eQTL 2.88e-02 0.304 0.138 0.915 Pro_T L2
ENSG00000060688 SNRNP40 -486743 sc-eQTL 1.32e-01 0.258 0.171 0.915 Treg L2
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 8.00e-01 0.0422 0.166 0.915 Treg L2
ENSG00000134644 PUM1 -255946 sc-eQTL 3.35e-01 -0.128 0.133 0.915 Treg L2
ENSG00000162511 LAPTM5 52271 sc-eQTL 8.61e-01 -0.0267 0.152 0.915 Treg L2
ENSG00000162517 PEF1 -834851 sc-eQTL 3.07e-01 -0.168 0.164 0.915 Treg L2
ENSG00000186056 MATN1-AS1 91541 sc-eQTL 2.52e-03 0.464 0.152 0.915 Treg L2
ENSG00000287510 AL137857.1 78352 sc-eQTL 4.72e-01 -0.111 0.155 0.915 Treg L2
ENSG00000060688 SNRNP40 -486743 sc-eQTL 2.92e-01 -0.18 0.171 0.92 cDC L2
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 2.13e-01 0.231 0.185 0.92 cDC L2
ENSG00000134644 PUM1 -255946 sc-eQTL 6.96e-01 0.0624 0.159 0.92 cDC L2
ENSG00000162511 LAPTM5 52271 sc-eQTL 4.29e-01 -0.0884 0.111 0.92 cDC L2
ENSG00000162517 PEF1 -834851 sc-eQTL 5.98e-02 0.303 0.16 0.92 cDC L2
ENSG00000168528 SERINC2 -599520 sc-eQTL 7.46e-01 0.0465 0.143 0.92 cDC L2
ENSG00000284543 LINC01226 -696181 sc-eQTL 3.64e-01 -0.128 0.141 0.92 cDC L2
ENSG00000287510 AL137857.1 78352 sc-eQTL 4.41e-01 -0.117 0.151 0.92 cDC L2
ENSG00000060688 SNRNP40 -486743 sc-eQTL 6.06e-01 -0.0689 0.133 0.915 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 8.84e-01 -0.0218 0.149 0.915 cMono_IL1B L2
ENSG00000134644 PUM1 -255946 sc-eQTL 3.42e-01 -0.0959 0.101 0.915 cMono_IL1B L2
ENSG00000162511 LAPTM5 52271 sc-eQTL 1.05e-01 -0.143 0.0879 0.915 cMono_IL1B L2
ENSG00000162512 SDC3 -98713 sc-eQTL 9.52e-01 -0.00994 0.167 0.915 cMono_IL1B L2
ENSG00000162517 PEF1 -834851 sc-eQTL 5.25e-01 0.0867 0.136 0.915 cMono_IL1B L2
ENSG00000168528 SERINC2 -599520 sc-eQTL 7.33e-03 0.449 0.166 0.915 cMono_IL1B L2
ENSG00000284543 LINC01226 -696181 sc-eQTL 6.08e-01 0.0765 0.149 0.915 cMono_IL1B L2
ENSG00000287510 AL137857.1 78352 sc-eQTL 9.46e-01 0.00942 0.139 0.915 cMono_IL1B L2
ENSG00000060688 SNRNP40 -486743 sc-eQTL 8.87e-01 0.0199 0.14 0.915 cMono_S100A L2
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 4.73e-03 -0.465 0.163 0.915 cMono_S100A L2
ENSG00000134644 PUM1 -255946 sc-eQTL 6.47e-01 0.055 0.12 0.915 cMono_S100A L2
ENSG00000162511 LAPTM5 52271 sc-eQTL 1.39e-01 -0.136 0.0916 0.915 cMono_S100A L2
ENSG00000162512 SDC3 -98713 sc-eQTL 4.83e-01 0.112 0.159 0.915 cMono_S100A L2
ENSG00000162517 PEF1 -834851 sc-eQTL 5.75e-01 -0.0807 0.144 0.915 cMono_S100A L2
ENSG00000168528 SERINC2 -599520 sc-eQTL 3.68e-03 0.485 0.165 0.915 cMono_S100A L2
ENSG00000284543 LINC01226 -696181 sc-eQTL 2.30e-01 0.164 0.136 0.915 cMono_S100A L2
ENSG00000287510 AL137857.1 78352 sc-eQTL 3.20e-01 -0.137 0.137 0.915 cMono_S100A L2
ENSG00000060688 SNRNP40 -486743 sc-eQTL 3.85e-03 0.639 0.218 0.924 gdT L2
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 8.35e-01 -0.0403 0.192 0.924 gdT L2
ENSG00000134644 PUM1 -255946 sc-eQTL 9.04e-01 0.024 0.198 0.924 gdT L2
ENSG00000162511 LAPTM5 52271 sc-eQTL 2.59e-01 0.243 0.215 0.924 gdT L2
ENSG00000162517 PEF1 -834851 sc-eQTL 1.67e-01 -0.272 0.196 0.924 gdT L2
ENSG00000186056 MATN1-AS1 91541 sc-eQTL 5.64e-01 0.115 0.199 0.924 gdT L2
ENSG00000287510 AL137857.1 78352 sc-eQTL 1.66e-01 0.266 0.191 0.924 gdT L2
ENSG00000060688 SNRNP40 -486743 sc-eQTL 1.15e-01 0.25 0.158 0.911 intMono L2
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 5.43e-01 -0.104 0.17 0.911 intMono L2
ENSG00000134644 PUM1 -255946 sc-eQTL 1.48e-01 -0.209 0.144 0.911 intMono L2
ENSG00000162511 LAPTM5 52271 sc-eQTL 9.30e-01 0.00999 0.113 0.911 intMono L2
ENSG00000162512 SDC3 -98713 sc-eQTL 2.95e-01 -0.163 0.155 0.911 intMono L2
ENSG00000162517 PEF1 -834851 sc-eQTL 2.62e-01 0.183 0.163 0.911 intMono L2
ENSG00000168528 SERINC2 -599520 sc-eQTL 7.22e-02 0.292 0.161 0.911 intMono L2
ENSG00000284543 LINC01226 -696181 sc-eQTL 9.19e-01 0.0157 0.154 0.911 intMono L2
ENSG00000287510 AL137857.1 78352 sc-eQTL 9.30e-01 0.0135 0.154 0.911 intMono L2
ENSG00000060688 SNRNP40 -486743 sc-eQTL 7.29e-01 -0.0499 0.143 0.912 ncMono L2
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 1.86e-01 -0.202 0.152 0.912 ncMono L2
ENSG00000134644 PUM1 -255946 sc-eQTL 5.08e-01 -0.0828 0.125 0.912 ncMono L2
ENSG00000162511 LAPTM5 52271 sc-eQTL 1.54e-01 -0.162 0.113 0.912 ncMono L2
ENSG00000162512 SDC3 -98713 sc-eQTL 8.38e-01 0.0261 0.127 0.912 ncMono L2
ENSG00000162517 PEF1 -834851 sc-eQTL 6.25e-01 0.0715 0.146 0.912 ncMono L2
ENSG00000168528 SERINC2 -599520 sc-eQTL 1.26e-01 0.212 0.138 0.912 ncMono L2
ENSG00000284543 LINC01226 -696181 sc-eQTL 8.73e-01 0.0223 0.139 0.912 ncMono L2
ENSG00000287510 AL137857.1 78352 sc-eQTL 6.00e-02 -0.27 0.143 0.912 ncMono L2
ENSG00000060688 SNRNP40 -486743 sc-eQTL 1.33e-01 0.247 0.163 0.915 pDC L2
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 2.93e-01 0.19 0.18 0.915 pDC L2
ENSG00000134644 PUM1 -255946 sc-eQTL 4.84e-01 -0.105 0.15 0.915 pDC L2
ENSG00000162511 LAPTM5 52271 sc-eQTL 5.37e-01 -0.0861 0.139 0.915 pDC L2
ENSG00000162517 PEF1 -834851 sc-eQTL 7.63e-01 -0.0547 0.181 0.915 pDC L2
ENSG00000168528 SERINC2 -599520 sc-eQTL 7.96e-01 0.0438 0.169 0.915 pDC L2
ENSG00000284543 LINC01226 -696181 sc-eQTL 1.64e-02 -0.312 0.129 0.915 pDC L2
ENSG00000287510 AL137857.1 78352 sc-eQTL 5.24e-01 0.0985 0.154 0.915 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -486743 sc-eQTL 6.68e-01 0.0726 0.169 0.915 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 4.13e-01 0.115 0.14 0.915 B_Memory LOneK1K
ENSG00000134644 PUM1 -255946 sc-eQTL 4.60e-01 0.092 0.124 0.915 B_Memory LOneK1K
ENSG00000162510 MATN1 86460 sc-eQTL 5.49e-01 -0.0851 0.142 0.915 B_Memory LOneK1K
ENSG00000162511 LAPTM5 52271 sc-eQTL 9.04e-01 0.0107 0.0893 0.915 B_Memory LOneK1K
ENSG00000162517 PEF1 -834851 sc-eQTL 1.08e-01 -0.237 0.147 0.915 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 91541 sc-eQTL 3.13e-01 0.119 0.118 0.915 B_Memory LOneK1K
ENSG00000287510 AL137857.1 78352 sc-eQTL 9.60e-01 0.00652 0.129 0.915 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -486743 sc-eQTL 6.76e-01 -0.0638 0.152 0.915 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 5.68e-01 -0.0689 0.12 0.915 B_Naive LOneK1K
ENSG00000134644 PUM1 -255946 sc-eQTL 5.11e-01 0.075 0.114 0.915 B_Naive LOneK1K
ENSG00000162510 MATN1 86460 sc-eQTL 7.07e-01 0.0413 0.11 0.915 B_Naive LOneK1K
ENSG00000162511 LAPTM5 52271 sc-eQTL 7.41e-01 -0.0255 0.0772 0.915 B_Naive LOneK1K
ENSG00000162517 PEF1 -834851 sc-eQTL 3.56e-01 0.13 0.141 0.915 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 91541 sc-eQTL 8.40e-01 -0.0201 0.0998 0.915 B_Naive LOneK1K
ENSG00000287510 AL137857.1 78352 sc-eQTL 3.75e-01 0.105 0.118 0.915 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -486743 sc-eQTL 6.73e-01 -0.0544 0.129 0.915 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 1.01e-01 -0.238 0.145 0.915 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -255946 sc-eQTL 3.25e-01 -0.0916 0.0928 0.915 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 52271 sc-eQTL 2.57e-01 -0.0926 0.0815 0.915 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -98713 sc-eQTL 5.60e-01 0.0973 0.167 0.915 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -834851 sc-eQTL 5.57e-01 -0.0689 0.117 0.915 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -599520 sc-eQTL 7.34e-03 0.456 0.169 0.915 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -696181 sc-eQTL 5.19e-01 0.0907 0.14 0.915 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 78352 sc-eQTL 5.55e-01 -0.0778 0.132 0.915 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -486743 sc-eQTL 7.36e-01 0.0469 0.139 0.914 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 1.93e-01 -0.198 0.152 0.914 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -255946 sc-eQTL 3.18e-01 -0.125 0.124 0.914 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 52271 sc-eQTL 9.83e-01 0.00209 0.0998 0.914 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -98713 sc-eQTL 5.72e-01 -0.0824 0.146 0.914 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -834851 sc-eQTL 8.05e-01 -0.0327 0.132 0.914 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -599520 sc-eQTL 3.34e-02 0.32 0.15 0.914 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -696181 sc-eQTL 8.32e-01 0.0304 0.143 0.914 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 78352 sc-eQTL 3.37e-01 -0.138 0.143 0.914 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -486743 sc-eQTL 1.30e-01 0.239 0.157 0.914 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -954848 sc-eQTL 3.54e-01 0.125 0.134 0.914 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -486937 sc-eQTL 3.15e-01 -0.108 0.108 0.914 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -255946 sc-eQTL 1.54e-01 -0.168 0.118 0.914 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 52271 sc-eQTL 6.89e-01 0.053 0.132 0.914 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -834851 sc-eQTL 3.80e-01 0.0883 0.1 0.914 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 91541 sc-eQTL 5.33e-01 0.095 0.152 0.914 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 78352 sc-eQTL 9.06e-01 -0.0155 0.132 0.914 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162511 LAPTM5 52271 eQTL 0.0256 -0.041 0.0183 0.0 0.0 0.0839
ENSG00000168528 SERINC2 -599520 eQTL 0.00207 0.218 0.0707 0.0 0.0 0.0839
ENSG00000186056 MATN1-AS1 91541 eQTL 9.03e-03 -0.0604 0.0231 0.0 0.0 0.0839

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000186056 MATN1-AS1 91541 4.89e-06 9.04e-06 6.41e-07 4.11e-06 1.61e-06 1.54e-06 8.05e-06 1.15e-06 4.79e-06 2.85e-06 8.91e-06 2.91e-06 1.06e-05 3.34e-06 9.95e-07 4.12e-06 2.07e-06 3.8e-06 1.49e-06 1.64e-06 2.77e-06 6.55e-06 4.8e-06 1.71e-06 9.63e-06 1.96e-06 2.79e-06 1.8e-06 5.81e-06 5.88e-06 3.28e-06 5.58e-07 5.42e-07 2.18e-06 1.99e-06 1.09e-06 9.83e-07 4.4e-07 8.75e-07 6.99e-07 2.79e-07 9.36e-06 4.2e-07 1.63e-07 3.75e-07 1.06e-06 1.03e-06 4.11e-07 4.98e-07