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Genes within 1Mb (chr1:30797019:A:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -499769 sc-eQTL 6.99e-01 0.0324 0.0836 0.299 B L1
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 3.01e-01 0.0693 0.0668 0.299 B L1
ENSG00000134644 PUM1 -268972 sc-eQTL 3.08e-02 -0.121 0.0556 0.299 B L1
ENSG00000162510 MATN1 73434 sc-eQTL 1.35e-01 -0.0882 0.0588 0.299 B L1
ENSG00000162511 LAPTM5 39245 sc-eQTL 2.56e-02 -0.103 0.0457 0.299 B L1
ENSG00000162517 PEF1 -847877 sc-eQTL 3.50e-01 -0.0653 0.0697 0.299 B L1
ENSG00000186056 MATN1-AS1 78515 sc-eQTL 1.41e-01 -0.0797 0.054 0.299 B L1
ENSG00000287510 AL137857.1 65326 sc-eQTL 8.86e-01 0.00917 0.0642 0.299 B L1
ENSG00000060688 SNRNP40 -499769 sc-eQTL 7.87e-01 0.0195 0.072 0.299 CD4T L1
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 4.37e-01 0.0437 0.0562 0.299 CD4T L1
ENSG00000134644 PUM1 -268972 sc-eQTL 1.24e-01 -0.0769 0.0498 0.299 CD4T L1
ENSG00000162511 LAPTM5 39245 sc-eQTL 2.06e-01 -0.0701 0.0553 0.299 CD4T L1
ENSG00000162517 PEF1 -847877 sc-eQTL 8.24e-01 0.0129 0.058 0.299 CD4T L1
ENSG00000186056 MATN1-AS1 78515 sc-eQTL 2.03e-01 0.0632 0.0495 0.299 CD4T L1
ENSG00000287510 AL137857.1 65326 sc-eQTL 5.84e-01 0.0326 0.0594 0.299 CD4T L1
ENSG00000060688 SNRNP40 -499769 sc-eQTL 3.16e-01 0.0949 0.0944 0.299 CD8T L1
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 8.42e-01 0.0125 0.063 0.299 CD8T L1
ENSG00000134644 PUM1 -268972 sc-eQTL 6.21e-01 0.0274 0.0554 0.299 CD8T L1
ENSG00000162511 LAPTM5 39245 sc-eQTL 5.62e-01 -0.0313 0.0538 0.299 CD8T L1
ENSG00000162517 PEF1 -847877 sc-eQTL 5.40e-01 -0.0406 0.0663 0.299 CD8T L1
ENSG00000186056 MATN1-AS1 78515 sc-eQTL 3.67e-01 -0.0569 0.063 0.299 CD8T L1
ENSG00000287510 AL137857.1 65326 sc-eQTL 5.29e-01 -0.05 0.0792 0.299 CD8T L1
ENSG00000060688 SNRNP40 -499769 sc-eQTL 7.67e-01 0.0255 0.0861 0.293 DC L1
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 2.34e-02 0.23 0.101 0.293 DC L1
ENSG00000134644 PUM1 -268972 sc-eQTL 3.41e-01 -0.076 0.0797 0.293 DC L1
ENSG00000162511 LAPTM5 39245 sc-eQTL 9.21e-01 -0.00569 0.057 0.293 DC L1
ENSG00000162517 PEF1 -847877 sc-eQTL 7.45e-01 0.0301 0.0924 0.293 DC L1
ENSG00000168528 SERINC2 -612546 sc-eQTL 4.28e-01 -0.0745 0.0939 0.293 DC L1
ENSG00000284543 LINC01226 -709207 sc-eQTL 7.01e-01 -0.0239 0.0623 0.293 DC L1
ENSG00000287510 AL137857.1 65326 sc-eQTL 8.30e-02 -0.156 0.0895 0.293 DC L1
ENSG00000060688 SNRNP40 -499769 sc-eQTL 7.09e-01 0.0248 0.0664 0.299 Mono L1
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 3.28e-01 0.0805 0.0822 0.299 Mono L1
ENSG00000134644 PUM1 -268972 sc-eQTL 2.19e-02 -0.12 0.0521 0.299 Mono L1
ENSG00000162511 LAPTM5 39245 sc-eQTL 9.40e-01 -0.00367 0.0486 0.299 Mono L1
ENSG00000162512 SDC3 -111739 sc-eQTL 5.83e-01 0.0513 0.0933 0.299 Mono L1
ENSG00000162517 PEF1 -847877 sc-eQTL 3.49e-01 0.0614 0.0654 0.299 Mono L1
ENSG00000168528 SERINC2 -612546 sc-eQTL 9.53e-01 -0.00596 0.1 0.299 Mono L1
ENSG00000284543 LINC01226 -709207 sc-eQTL 5.63e-01 0.0511 0.0882 0.299 Mono L1
ENSG00000287510 AL137857.1 65326 sc-eQTL 7.92e-01 0.0203 0.0771 0.299 Mono L1
ENSG00000060688 SNRNP40 -499769 sc-eQTL 1.98e-01 -0.118 0.0912 0.298 NK L1
ENSG00000121753 ADGRB2 -967874 sc-eQTL 8.72e-01 -0.0127 0.0788 0.298 NK L1
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 5.14e-01 -0.0409 0.0626 0.298 NK L1
ENSG00000134644 PUM1 -268972 sc-eQTL 3.83e-01 -0.0574 0.0656 0.298 NK L1
ENSG00000162511 LAPTM5 39245 sc-eQTL 5.35e-01 0.047 0.0756 0.298 NK L1
ENSG00000162517 PEF1 -847877 sc-eQTL 9.12e-01 0.0061 0.0552 0.298 NK L1
ENSG00000186056 MATN1-AS1 78515 sc-eQTL 1.09e-02 -0.215 0.0837 0.298 NK L1
ENSG00000287510 AL137857.1 65326 sc-eQTL 8.41e-01 -0.0157 0.0785 0.298 NK L1
ENSG00000060688 SNRNP40 -499769 sc-eQTL 2.98e-01 -0.0711 0.0682 0.299 Other_T L1
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 5.77e-01 0.0408 0.073 0.299 Other_T L1
ENSG00000134644 PUM1 -268972 sc-eQTL 5.70e-01 -0.0373 0.0657 0.299 Other_T L1
ENSG00000162511 LAPTM5 39245 sc-eQTL 2.08e-01 -0.0677 0.0537 0.299 Other_T L1
ENSG00000162517 PEF1 -847877 sc-eQTL 8.35e-01 0.015 0.0719 0.299 Other_T L1
ENSG00000186056 MATN1-AS1 78515 sc-eQTL 4.79e-01 0.0624 0.0881 0.299 Other_T L1
ENSG00000287510 AL137857.1 65326 sc-eQTL 5.77e-01 0.0512 0.0918 0.299 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -499769 sc-eQTL 2.83e-01 0.121 0.113 0.27 B_Activated L2
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 9.23e-01 0.011 0.114 0.27 B_Activated L2
ENSG00000134644 PUM1 -268972 sc-eQTL 1.58e-01 -0.149 0.105 0.27 B_Activated L2
ENSG00000162510 MATN1 73434 sc-eQTL 3.98e-01 -0.0782 0.0923 0.27 B_Activated L2
ENSG00000162511 LAPTM5 39245 sc-eQTL 4.34e-01 -0.0504 0.0644 0.27 B_Activated L2
ENSG00000162517 PEF1 -847877 sc-eQTL 5.00e-01 0.0741 0.11 0.27 B_Activated L2
ENSG00000186056 MATN1-AS1 78515 sc-eQTL 2.06e-01 0.132 0.104 0.27 B_Activated L2
ENSG00000287510 AL137857.1 65326 sc-eQTL 8.08e-01 -0.0224 0.0921 0.27 B_Activated L2
ENSG00000060688 SNRNP40 -499769 sc-eQTL 8.75e-01 -0.0162 0.103 0.3 B_Intermediate L2
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 3.46e-02 0.181 0.0853 0.3 B_Intermediate L2
ENSG00000134644 PUM1 -268972 sc-eQTL 3.98e-01 -0.0688 0.0812 0.3 B_Intermediate L2
ENSG00000162510 MATN1 73434 sc-eQTL 3.73e-01 0.0754 0.0845 0.3 B_Intermediate L2
ENSG00000162511 LAPTM5 39245 sc-eQTL 2.53e-02 -0.116 0.0513 0.3 B_Intermediate L2
ENSG00000162517 PEF1 -847877 sc-eQTL 4.96e-02 -0.189 0.0956 0.3 B_Intermediate L2
ENSG00000186056 MATN1-AS1 78515 sc-eQTL 8.95e-01 0.0096 0.0729 0.3 B_Intermediate L2
ENSG00000287510 AL137857.1 65326 sc-eQTL 2.93e-01 -0.0858 0.0814 0.3 B_Intermediate L2
ENSG00000060688 SNRNP40 -499769 sc-eQTL 4.76e-01 0.0714 0.1 0.3 B_Memory L2
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 6.10e-01 -0.0471 0.0923 0.3 B_Memory L2
ENSG00000134644 PUM1 -268972 sc-eQTL 4.04e-01 0.0671 0.0803 0.3 B_Memory L2
ENSG00000162510 MATN1 73434 sc-eQTL 4.49e-01 -0.0582 0.0768 0.3 B_Memory L2
ENSG00000162511 LAPTM5 39245 sc-eQTL 2.53e-01 -0.0778 0.068 0.3 B_Memory L2
ENSG00000162517 PEF1 -847877 sc-eQTL 5.20e-01 -0.0586 0.0909 0.3 B_Memory L2
ENSG00000186056 MATN1-AS1 78515 sc-eQTL 7.51e-02 -0.138 0.0774 0.3 B_Memory L2
ENSG00000287510 AL137857.1 65326 sc-eQTL 7.10e-01 -0.034 0.0913 0.3 B_Memory L2
ENSG00000060688 SNRNP40 -499769 sc-eQTL 2.33e-01 0.11 0.0916 0.299 B_Naive1 L2
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 7.46e-01 -0.0258 0.0793 0.299 B_Naive1 L2
ENSG00000134644 PUM1 -268972 sc-eQTL 6.19e-02 -0.13 0.0694 0.299 B_Naive1 L2
ENSG00000162510 MATN1 73434 sc-eQTL 2.05e-01 -0.0899 0.0708 0.299 B_Naive1 L2
ENSG00000162511 LAPTM5 39245 sc-eQTL 2.75e-02 -0.104 0.0469 0.299 B_Naive1 L2
ENSG00000162517 PEF1 -847877 sc-eQTL 2.65e-01 0.0933 0.0834 0.299 B_Naive1 L2
ENSG00000186056 MATN1-AS1 78515 sc-eQTL 1.71e-01 -0.0852 0.062 0.299 B_Naive1 L2
ENSG00000287510 AL137857.1 65326 sc-eQTL 8.15e-01 -0.0181 0.077 0.299 B_Naive1 L2
ENSG00000060688 SNRNP40 -499769 sc-eQTL 7.69e-01 -0.0285 0.0968 0.298 B_Naive2 L2
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 2.81e-01 0.0862 0.0797 0.298 B_Naive2 L2
ENSG00000134644 PUM1 -268972 sc-eQTL 5.79e-01 -0.0435 0.0782 0.298 B_Naive2 L2
ENSG00000162510 MATN1 73434 sc-eQTL 3.70e-01 -0.0673 0.075 0.298 B_Naive2 L2
ENSG00000162511 LAPTM5 39245 sc-eQTL 2.97e-02 -0.11 0.0504 0.298 B_Naive2 L2
ENSG00000162517 PEF1 -847877 sc-eQTL 7.02e-01 0.0355 0.0927 0.298 B_Naive2 L2
ENSG00000186056 MATN1-AS1 78515 sc-eQTL 1.30e-01 -0.112 0.0738 0.298 B_Naive2 L2
ENSG00000287510 AL137857.1 65326 sc-eQTL 4.25e-01 -0.064 0.0801 0.298 B_Naive2 L2
ENSG00000060688 SNRNP40 -499769 sc-eQTL 7.12e-01 -0.0357 0.0967 0.291 CD4_CTL L2
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 4.48e-01 0.0722 0.095 0.291 CD4_CTL L2
ENSG00000134644 PUM1 -268972 sc-eQTL 6.50e-01 0.0423 0.0933 0.291 CD4_CTL L2
ENSG00000162511 LAPTM5 39245 sc-eQTL 5.27e-01 -0.0526 0.0831 0.291 CD4_CTL L2
ENSG00000162517 PEF1 -847877 sc-eQTL 2.09e-01 0.107 0.0849 0.291 CD4_CTL L2
ENSG00000186056 MATN1-AS1 78515 sc-eQTL 6.48e-01 -0.0416 0.0909 0.291 CD4_CTL L2
ENSG00000287510 AL137857.1 65326 sc-eQTL 5.48e-01 0.0482 0.0802 0.291 CD4_CTL L2
ENSG00000060688 SNRNP40 -499769 sc-eQTL 5.77e-01 -0.0422 0.0755 0.299 CD4_Naive L2
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 1.26e-01 0.102 0.0666 0.299 CD4_Naive L2
ENSG00000134644 PUM1 -268972 sc-eQTL 1.91e-01 -0.0699 0.0533 0.299 CD4_Naive L2
ENSG00000162511 LAPTM5 39245 sc-eQTL 3.50e-01 -0.0536 0.0572 0.299 CD4_Naive L2
ENSG00000162517 PEF1 -847877 sc-eQTL 8.62e-01 -0.011 0.0629 0.299 CD4_Naive L2
ENSG00000186056 MATN1-AS1 78515 sc-eQTL 6.55e-02 0.107 0.0577 0.299 CD4_Naive L2
ENSG00000287510 AL137857.1 65326 sc-eQTL 7.52e-01 -0.0211 0.0668 0.299 CD4_Naive L2
ENSG00000060688 SNRNP40 -499769 sc-eQTL 2.84e-02 0.206 0.0933 0.299 CD4_TCM L2
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 3.66e-01 -0.0689 0.0759 0.299 CD4_TCM L2
ENSG00000134644 PUM1 -268972 sc-eQTL 6.65e-02 -0.123 0.0668 0.299 CD4_TCM L2
ENSG00000162511 LAPTM5 39245 sc-eQTL 2.81e-01 -0.0602 0.0557 0.299 CD4_TCM L2
ENSG00000162517 PEF1 -847877 sc-eQTL 6.22e-02 0.139 0.0743 0.299 CD4_TCM L2
ENSG00000186056 MATN1-AS1 78515 sc-eQTL 6.86e-01 -0.0287 0.0709 0.299 CD4_TCM L2
ENSG00000287510 AL137857.1 65326 sc-eQTL 8.55e-01 -0.0144 0.079 0.299 CD4_TCM L2
ENSG00000060688 SNRNP40 -499769 sc-eQTL 7.99e-01 0.0241 0.0943 0.299 CD4_TEM L2
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 9.01e-01 0.0112 0.0899 0.299 CD4_TEM L2
ENSG00000134644 PUM1 -268972 sc-eQTL 8.32e-01 -0.0159 0.0749 0.299 CD4_TEM L2
ENSG00000162511 LAPTM5 39245 sc-eQTL 6.17e-02 -0.141 0.0751 0.299 CD4_TEM L2
ENSG00000162517 PEF1 -847877 sc-eQTL 9.94e-01 0.000656 0.0848 0.299 CD4_TEM L2
ENSG00000186056 MATN1-AS1 78515 sc-eQTL 4.93e-01 -0.0608 0.0885 0.299 CD4_TEM L2
ENSG00000287510 AL137857.1 65326 sc-eQTL 7.68e-01 -0.0258 0.0873 0.299 CD4_TEM L2
ENSG00000060688 SNRNP40 -499769 sc-eQTL 2.82e-01 0.111 0.103 0.299 CD8_CTL L2
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 7.67e-01 0.0236 0.0794 0.299 CD8_CTL L2
ENSG00000134644 PUM1 -268972 sc-eQTL 3.58e-01 -0.0709 0.0769 0.299 CD8_CTL L2
ENSG00000162511 LAPTM5 39245 sc-eQTL 4.18e-01 0.0692 0.0853 0.299 CD8_CTL L2
ENSG00000162517 PEF1 -847877 sc-eQTL 1.52e-01 0.106 0.074 0.299 CD8_CTL L2
ENSG00000186056 MATN1-AS1 78515 sc-eQTL 8.20e-01 -0.0204 0.0897 0.299 CD8_CTL L2
ENSG00000287510 AL137857.1 65326 sc-eQTL 6.80e-01 -0.0349 0.0844 0.299 CD8_CTL L2
ENSG00000060688 SNRNP40 -499769 sc-eQTL 7.80e-01 0.0264 0.0944 0.299 CD8_Naive L2
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 7.73e-01 0.0235 0.0814 0.299 CD8_Naive L2
ENSG00000134644 PUM1 -268972 sc-eQTL 9.60e-01 0.00328 0.0655 0.299 CD8_Naive L2
ENSG00000162511 LAPTM5 39245 sc-eQTL 1.42e-01 -0.0922 0.0625 0.299 CD8_Naive L2
ENSG00000162517 PEF1 -847877 sc-eQTL 6.30e-01 -0.0421 0.0872 0.299 CD8_Naive L2
ENSG00000186056 MATN1-AS1 78515 sc-eQTL 9.07e-01 0.00913 0.0784 0.299 CD8_Naive L2
ENSG00000287510 AL137857.1 65326 sc-eQTL 8.31e-01 -0.0182 0.0853 0.299 CD8_Naive L2
ENSG00000060688 SNRNP40 -499769 sc-eQTL 2.68e-01 0.116 0.105 0.303 CD8_TCM L2
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 2.69e-01 -0.106 0.0958 0.303 CD8_TCM L2
ENSG00000134644 PUM1 -268972 sc-eQTL 7.49e-01 0.029 0.0903 0.303 CD8_TCM L2
ENSG00000162511 LAPTM5 39245 sc-eQTL 5.79e-01 0.0525 0.0945 0.303 CD8_TCM L2
ENSG00000162517 PEF1 -847877 sc-eQTL 1.71e-01 -0.132 0.0962 0.303 CD8_TCM L2
ENSG00000186056 MATN1-AS1 78515 sc-eQTL 3.10e-01 0.089 0.0873 0.303 CD8_TCM L2
ENSG00000287510 AL137857.1 65326 sc-eQTL 1.83e-01 -0.118 0.0881 0.303 CD8_TCM L2
ENSG00000060688 SNRNP40 -499769 sc-eQTL 6.63e-01 -0.0437 0.1 0.292 CD8_TEM L2
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 6.29e-01 0.0465 0.0959 0.292 CD8_TEM L2
ENSG00000134644 PUM1 -268972 sc-eQTL 9.17e-01 0.0103 0.0981 0.292 CD8_TEM L2
ENSG00000162511 LAPTM5 39245 sc-eQTL 7.56e-01 -0.0286 0.0923 0.292 CD8_TEM L2
ENSG00000162517 PEF1 -847877 sc-eQTL 8.98e-01 0.0112 0.0869 0.292 CD8_TEM L2
ENSG00000186056 MATN1-AS1 78515 sc-eQTL 4.02e-01 0.0804 0.0956 0.292 CD8_TEM L2
ENSG00000287510 AL137857.1 65326 sc-eQTL 3.62e-01 -0.079 0.0865 0.292 CD8_TEM L2
ENSG00000060688 SNRNP40 -499769 sc-eQTL 4.00e-02 -0.204 0.0986 0.299 MAIT L2
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 2.83e-02 0.193 0.0872 0.299 MAIT L2
ENSG00000134644 PUM1 -268972 sc-eQTL 6.85e-01 -0.0343 0.0845 0.299 MAIT L2
ENSG00000162511 LAPTM5 39245 sc-eQTL 9.70e-01 -0.00297 0.0798 0.299 MAIT L2
ENSG00000162517 PEF1 -847877 sc-eQTL 7.25e-01 0.0309 0.0876 0.299 MAIT L2
ENSG00000186056 MATN1-AS1 78515 sc-eQTL 5.90e-01 0.0479 0.0888 0.299 MAIT L2
ENSG00000287510 AL137857.1 65326 sc-eQTL 4.99e-01 0.062 0.0915 0.299 MAIT L2
ENSG00000060688 SNRNP40 -499769 sc-eQTL 9.21e-01 -0.0103 0.104 0.298 NK_CD56bright L2
ENSG00000121753 ADGRB2 -967874 sc-eQTL 3.41e-01 0.0779 0.0815 0.298 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 6.32e-01 -0.0422 0.0881 0.298 NK_CD56bright L2
ENSG00000134644 PUM1 -268972 sc-eQTL 5.13e-01 -0.0607 0.0925 0.298 NK_CD56bright L2
ENSG00000162511 LAPTM5 39245 sc-eQTL 2.12e-01 0.114 0.091 0.298 NK_CD56bright L2
ENSG00000162517 PEF1 -847877 sc-eQTL 5.08e-01 -0.0587 0.0886 0.298 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 78515 sc-eQTL 8.81e-01 -0.0138 0.0918 0.298 NK_CD56bright L2
ENSG00000287510 AL137857.1 65326 sc-eQTL 7.55e-01 0.0283 0.0904 0.298 NK_CD56bright L2
ENSG00000060688 SNRNP40 -499769 sc-eQTL 5.60e-01 -0.0563 0.0964 0.297 NK_CD56dim L2
ENSG00000121753 ADGRB2 -967874 sc-eQTL 2.59e-01 -0.0957 0.0846 0.297 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 8.66e-01 0.012 0.0713 0.297 NK_CD56dim L2
ENSG00000134644 PUM1 -268972 sc-eQTL 5.85e-01 -0.04 0.0731 0.297 NK_CD56dim L2
ENSG00000162511 LAPTM5 39245 sc-eQTL 8.73e-01 -0.0124 0.078 0.297 NK_CD56dim L2
ENSG00000162517 PEF1 -847877 sc-eQTL 6.79e-01 -0.0287 0.0694 0.297 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 78515 sc-eQTL 6.95e-02 -0.177 0.097 0.297 NK_CD56dim L2
ENSG00000287510 AL137857.1 65326 sc-eQTL 8.77e-01 -0.0125 0.0807 0.297 NK_CD56dim L2
ENSG00000060688 SNRNP40 -499769 sc-eQTL 2.37e-01 -0.123 0.104 0.304 NK_HLA L2
ENSG00000121753 ADGRB2 -967874 sc-eQTL 2.38e-01 -0.0974 0.0823 0.304 NK_HLA L2
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 4.99e-01 -0.0629 0.0927 0.304 NK_HLA L2
ENSG00000134644 PUM1 -268972 sc-eQTL 2.23e-01 -0.11 0.0901 0.304 NK_HLA L2
ENSG00000162511 LAPTM5 39245 sc-eQTL 6.26e-01 -0.0421 0.0863 0.304 NK_HLA L2
ENSG00000162517 PEF1 -847877 sc-eQTL 2.77e-01 0.106 0.097 0.304 NK_HLA L2
ENSG00000186056 MATN1-AS1 78515 sc-eQTL 3.04e-01 -0.0945 0.0916 0.304 NK_HLA L2
ENSG00000287510 AL137857.1 65326 sc-eQTL 2.31e-01 -0.106 0.0885 0.304 NK_HLA L2
ENSG00000060688 SNRNP40 -499769 sc-eQTL 7.42e-01 -0.031 0.0938 0.297 NK_cytokine L2
ENSG00000121753 ADGRB2 -967874 sc-eQTL 5.38e-01 0.0523 0.0847 0.297 NK_cytokine L2
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 2.04e-01 -0.0929 0.073 0.297 NK_cytokine L2
ENSG00000134644 PUM1 -268972 sc-eQTL 5.22e-01 0.0508 0.0791 0.297 NK_cytokine L2
ENSG00000162511 LAPTM5 39245 sc-eQTL 4.99e-01 0.059 0.0871 0.297 NK_cytokine L2
ENSG00000162517 PEF1 -847877 sc-eQTL 8.25e-01 0.0165 0.0743 0.297 NK_cytokine L2
ENSG00000186056 MATN1-AS1 78515 sc-eQTL 1.39e-01 -0.136 0.0919 0.297 NK_cytokine L2
ENSG00000287510 AL137857.1 65326 sc-eQTL 4.49e-01 -0.0651 0.0859 0.297 NK_cytokine L2
ENSG00000060688 SNRNP40 -499769 sc-eQTL 5.56e-01 0.0648 0.11 0.281 PB L2
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 8.56e-01 -0.0232 0.127 0.281 PB L2
ENSG00000134644 PUM1 -268972 sc-eQTL 8.00e-02 0.193 0.109 0.281 PB L2
ENSG00000162510 MATN1 73434 sc-eQTL 9.83e-01 0.00226 0.103 0.281 PB L2
ENSG00000162511 LAPTM5 39245 sc-eQTL 5.52e-01 0.0439 0.0736 0.281 PB L2
ENSG00000162517 PEF1 -847877 sc-eQTL 1.84e-01 0.151 0.113 0.281 PB L2
ENSG00000186056 MATN1-AS1 78515 sc-eQTL 5.16e-01 0.0656 0.101 0.281 PB L2
ENSG00000287510 AL137857.1 65326 sc-eQTL 7.25e-01 0.0379 0.107 0.281 PB L2
ENSG00000060688 SNRNP40 -499769 sc-eQTL 1.10e-01 0.119 0.0742 0.298 Pro_T L2
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 9.38e-01 0.00734 0.0948 0.298 Pro_T L2
ENSG00000134644 PUM1 -268972 sc-eQTL 5.06e-01 -0.0589 0.0883 0.298 Pro_T L2
ENSG00000162511 LAPTM5 39245 sc-eQTL 8.86e-01 0.00912 0.0634 0.298 Pro_T L2
ENSG00000162517 PEF1 -847877 sc-eQTL 2.36e-02 0.21 0.0919 0.298 Pro_T L2
ENSG00000186056 MATN1-AS1 78515 sc-eQTL 4.89e-01 -0.0613 0.0885 0.298 Pro_T L2
ENSG00000287510 AL137857.1 65326 sc-eQTL 7.48e-01 0.0263 0.0815 0.298 Pro_T L2
ENSG00000060688 SNRNP40 -499769 sc-eQTL 7.04e-01 -0.0367 0.0965 0.299 Treg L2
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 7.35e-01 -0.0316 0.0934 0.299 Treg L2
ENSG00000134644 PUM1 -268972 sc-eQTL 6.76e-02 -0.136 0.0741 0.299 Treg L2
ENSG00000162511 LAPTM5 39245 sc-eQTL 2.54e-01 -0.0975 0.0853 0.299 Treg L2
ENSG00000162517 PEF1 -847877 sc-eQTL 8.84e-01 -0.0135 0.0924 0.299 Treg L2
ENSG00000186056 MATN1-AS1 78515 sc-eQTL 1.22e-01 0.135 0.0867 0.299 Treg L2
ENSG00000287510 AL137857.1 65326 sc-eQTL 7.98e-01 0.0223 0.0871 0.299 Treg L2
ENSG00000060688 SNRNP40 -499769 sc-eQTL 5.65e-01 -0.0576 0.0999 0.295 cDC L2
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 7.02e-02 0.195 0.107 0.295 cDC L2
ENSG00000134644 PUM1 -268972 sc-eQTL 2.57e-01 -0.105 0.0927 0.295 cDC L2
ENSG00000162511 LAPTM5 39245 sc-eQTL 6.74e-01 -0.0274 0.0651 0.295 cDC L2
ENSG00000162517 PEF1 -847877 sc-eQTL 9.03e-01 0.0115 0.0944 0.295 cDC L2
ENSG00000168528 SERINC2 -612546 sc-eQTL 6.35e-01 -0.0397 0.0836 0.295 cDC L2
ENSG00000284543 LINC01226 -709207 sc-eQTL 3.02e-01 0.0848 0.082 0.295 cDC L2
ENSG00000287510 AL137857.1 65326 sc-eQTL 1.56e-01 -0.125 0.088 0.295 cDC L2
ENSG00000060688 SNRNP40 -499769 sc-eQTL 7.68e-01 0.0239 0.0807 0.299 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 8.26e-01 0.0198 0.09 0.299 cMono_IL1B L2
ENSG00000134644 PUM1 -268972 sc-eQTL 4.14e-02 -0.124 0.0603 0.299 cMono_IL1B L2
ENSG00000162511 LAPTM5 39245 sc-eQTL 6.19e-01 0.0266 0.0534 0.299 cMono_IL1B L2
ENSG00000162512 SDC3 -111739 sc-eQTL 4.39e-01 0.078 0.101 0.299 cMono_IL1B L2
ENSG00000162517 PEF1 -847877 sc-eQTL 7.84e-01 -0.0226 0.0823 0.299 cMono_IL1B L2
ENSG00000168528 SERINC2 -612546 sc-eQTL 6.71e-01 -0.0434 0.102 0.299 cMono_IL1B L2
ENSG00000284543 LINC01226 -709207 sc-eQTL 7.14e-01 0.0331 0.0901 0.299 cMono_IL1B L2
ENSG00000287510 AL137857.1 65326 sc-eQTL 1.48e-01 0.121 0.0836 0.299 cMono_IL1B L2
ENSG00000060688 SNRNP40 -499769 sc-eQTL 5.49e-01 -0.051 0.085 0.299 cMono_S100A L2
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 3.57e-01 0.0926 0.1 0.299 cMono_S100A L2
ENSG00000134644 PUM1 -268972 sc-eQTL 2.47e-01 -0.084 0.0724 0.299 cMono_S100A L2
ENSG00000162511 LAPTM5 39245 sc-eQTL 8.84e-01 -0.00818 0.0558 0.299 cMono_S100A L2
ENSG00000162512 SDC3 -111739 sc-eQTL 4.49e-01 0.073 0.0963 0.299 cMono_S100A L2
ENSG00000162517 PEF1 -847877 sc-eQTL 1.42e-01 0.128 0.0866 0.299 cMono_S100A L2
ENSG00000168528 SERINC2 -612546 sc-eQTL 5.42e-01 -0.0623 0.102 0.299 cMono_S100A L2
ENSG00000284543 LINC01226 -709207 sc-eQTL 5.85e-01 0.0453 0.0829 0.299 cMono_S100A L2
ENSG00000287510 AL137857.1 65326 sc-eQTL 8.07e-01 0.0204 0.0833 0.299 cMono_S100A L2
ENSG00000060688 SNRNP40 -499769 sc-eQTL 9.00e-01 0.0152 0.121 0.309 gdT L2
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 2.96e-01 -0.109 0.104 0.309 gdT L2
ENSG00000134644 PUM1 -268972 sc-eQTL 6.27e-01 -0.0521 0.107 0.309 gdT L2
ENSG00000162511 LAPTM5 39245 sc-eQTL 4.03e-02 -0.238 0.115 0.309 gdT L2
ENSG00000162517 PEF1 -847877 sc-eQTL 5.42e-01 -0.065 0.106 0.309 gdT L2
ENSG00000186056 MATN1-AS1 78515 sc-eQTL 6.04e-02 0.201 0.106 0.309 gdT L2
ENSG00000287510 AL137857.1 65326 sc-eQTL 2.67e-01 0.115 0.104 0.309 gdT L2
ENSG00000060688 SNRNP40 -499769 sc-eQTL 5.11e-01 0.0613 0.093 0.298 intMono L2
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 6.18e-01 0.05 0.1 0.298 intMono L2
ENSG00000134644 PUM1 -268972 sc-eQTL 7.48e-01 -0.0273 0.0849 0.298 intMono L2
ENSG00000162511 LAPTM5 39245 sc-eQTL 5.38e-01 -0.0411 0.0666 0.298 intMono L2
ENSG00000162512 SDC3 -111739 sc-eQTL 2.58e-01 0.103 0.091 0.298 intMono L2
ENSG00000162517 PEF1 -847877 sc-eQTL 9.78e-01 -0.00264 0.0959 0.298 intMono L2
ENSG00000168528 SERINC2 -612546 sc-eQTL 9.21e-01 0.00951 0.0955 0.298 intMono L2
ENSG00000284543 LINC01226 -709207 sc-eQTL 9.73e-01 -0.00305 0.0905 0.298 intMono L2
ENSG00000287510 AL137857.1 65326 sc-eQTL 6.14e-01 -0.0457 0.0905 0.298 intMono L2
ENSG00000060688 SNRNP40 -499769 sc-eQTL 2.49e-01 0.0993 0.086 0.292 ncMono L2
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 5.06e-01 -0.0613 0.0919 0.292 ncMono L2
ENSG00000134644 PUM1 -268972 sc-eQTL 6.95e-02 -0.136 0.0745 0.292 ncMono L2
ENSG00000162511 LAPTM5 39245 sc-eQTL 8.63e-01 -0.0118 0.0682 0.292 ncMono L2
ENSG00000162512 SDC3 -111739 sc-eQTL 7.38e-01 0.0256 0.0765 0.292 ncMono L2
ENSG00000162517 PEF1 -847877 sc-eQTL 6.36e-01 0.0416 0.0877 0.292 ncMono L2
ENSG00000168528 SERINC2 -612546 sc-eQTL 9.22e-01 0.00819 0.0835 0.292 ncMono L2
ENSG00000284543 LINC01226 -709207 sc-eQTL 1.05e-01 -0.135 0.0829 0.292 ncMono L2
ENSG00000287510 AL137857.1 65326 sc-eQTL 7.04e-03 -0.231 0.0849 0.292 ncMono L2
ENSG00000060688 SNRNP40 -499769 sc-eQTL 2.43e-01 0.12 0.102 0.288 pDC L2
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 7.07e-02 0.203 0.112 0.288 pDC L2
ENSG00000134644 PUM1 -268972 sc-eQTL 9.53e-01 0.00554 0.0935 0.288 pDC L2
ENSG00000162511 LAPTM5 39245 sc-eQTL 6.24e-01 0.0426 0.0868 0.288 pDC L2
ENSG00000162517 PEF1 -847877 sc-eQTL 6.15e-01 0.0568 0.113 0.288 pDC L2
ENSG00000168528 SERINC2 -612546 sc-eQTL 6.69e-01 0.0452 0.105 0.288 pDC L2
ENSG00000284543 LINC01226 -709207 sc-eQTL 9.62e-01 0.0039 0.0818 0.288 pDC L2
ENSG00000287510 AL137857.1 65326 sc-eQTL 3.66e-01 0.087 0.096 0.288 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -499769 sc-eQTL 8.83e-01 0.0144 0.0979 0.299 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 1.62e-01 0.114 0.0811 0.299 B_Memory LOneK1K
ENSG00000134644 PUM1 -268972 sc-eQTL 7.47e-01 -0.0233 0.0722 0.299 B_Memory LOneK1K
ENSG00000162510 MATN1 73434 sc-eQTL 5.78e-01 -0.0458 0.0823 0.299 B_Memory LOneK1K
ENSG00000162511 LAPTM5 39245 sc-eQTL 6.94e-02 -0.0937 0.0513 0.299 B_Memory LOneK1K
ENSG00000162517 PEF1 -847877 sc-eQTL 8.82e-02 -0.146 0.0851 0.299 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 78515 sc-eQTL 8.50e-01 -0.0129 0.0684 0.299 B_Memory LOneK1K
ENSG00000287510 AL137857.1 65326 sc-eQTL 7.58e-01 -0.023 0.0746 0.299 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -499769 sc-eQTL 8.93e-01 0.012 0.0892 0.299 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 7.61e-01 0.0215 0.0705 0.299 B_Naive LOneK1K
ENSG00000134644 PUM1 -268972 sc-eQTL 2.78e-02 -0.146 0.066 0.299 B_Naive LOneK1K
ENSG00000162510 MATN1 73434 sc-eQTL 7.60e-02 -0.114 0.0638 0.299 B_Naive LOneK1K
ENSG00000162511 LAPTM5 39245 sc-eQTL 4.74e-02 -0.0894 0.0448 0.299 B_Naive LOneK1K
ENSG00000162517 PEF1 -847877 sc-eQTL 3.19e-01 0.0823 0.0824 0.299 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 78515 sc-eQTL 1.03e-01 -0.0949 0.058 0.299 B_Naive LOneK1K
ENSG00000287510 AL137857.1 65326 sc-eQTL 8.97e-01 -0.00901 0.0694 0.299 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -499769 sc-eQTL 8.21e-01 0.0174 0.0767 0.299 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 4.03e-01 0.0727 0.0867 0.299 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -268972 sc-eQTL 1.75e-02 -0.131 0.0547 0.299 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 39245 sc-eQTL 8.80e-01 0.00735 0.0487 0.299 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -111739 sc-eQTL 6.58e-01 0.044 0.0993 0.299 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -847877 sc-eQTL 4.37e-01 0.0544 0.0698 0.299 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -612546 sc-eQTL 7.34e-01 -0.0347 0.102 0.299 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -709207 sc-eQTL 4.39e-01 0.065 0.0837 0.299 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 65326 sc-eQTL 2.06e-01 0.0991 0.0782 0.299 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -499769 sc-eQTL 4.62e-01 0.0602 0.0817 0.297 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 9.52e-01 0.00542 0.0895 0.297 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -268972 sc-eQTL 1.96e-01 -0.0948 0.073 0.297 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 39245 sc-eQTL 6.54e-01 -0.0263 0.0586 0.297 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -111739 sc-eQTL 3.37e-01 0.0822 0.0855 0.297 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -847877 sc-eQTL 7.75e-01 -0.0223 0.0778 0.297 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -612546 sc-eQTL 9.35e-01 -0.00726 0.0888 0.297 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -709207 sc-eQTL 8.07e-01 -0.0206 0.0843 0.297 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 65326 sc-eQTL 6.16e-02 -0.157 0.0837 0.297 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -499769 sc-eQTL 2.40e-01 -0.108 0.0917 0.297 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -967874 sc-eQTL 7.30e-01 -0.0271 0.0784 0.297 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -499963 sc-eQTL 5.55e-01 -0.0372 0.0628 0.297 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -268972 sc-eQTL 4.97e-01 -0.0469 0.0688 0.297 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 39245 sc-eQTL 6.75e-01 0.0323 0.077 0.297 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -847877 sc-eQTL 7.81e-01 0.0163 0.0585 0.297 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 78515 sc-eQTL 7.34e-03 -0.236 0.0873 0.297 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 65326 sc-eQTL 5.59e-01 -0.0448 0.0766 0.297 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162511 LAPTM5 39245 eQTL 0.0103 0.0291 0.0113 0.0 0.0 0.285
ENSG00000168528 SERINC2 -612546 eQTL 0.0267 -0.097 0.0437 0.0 0.0 0.285

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina