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Genes within 1Mb (chr1:30785980:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -510808 sc-eQTL 7.77e-01 0.0232 0.082 0.318 B L1
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 5.66e-01 0.0377 0.0656 0.318 B L1
ENSG00000134644 PUM1 -280011 sc-eQTL 5.61e-02 -0.105 0.0546 0.318 B L1
ENSG00000162510 MATN1 62395 sc-eQTL 2.14e-01 -0.0719 0.0577 0.318 B L1
ENSG00000162511 LAPTM5 28206 sc-eQTL 5.98e-02 -0.0851 0.045 0.318 B L1
ENSG00000162517 PEF1 -858916 sc-eQTL 8.78e-01 0.0105 0.0685 0.318 B L1
ENSG00000186056 MATN1-AS1 67476 sc-eQTL 4.19e-02 -0.108 0.0526 0.318 B L1
ENSG00000287510 AL137857.1 54287 sc-eQTL 8.37e-01 0.013 0.0629 0.318 B L1
ENSG00000060688 SNRNP40 -510808 sc-eQTL 2.94e-01 0.0736 0.0699 0.318 CD4T L1
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 9.89e-01 0.000782 0.0548 0.318 CD4T L1
ENSG00000134644 PUM1 -280011 sc-eQTL 7.01e-01 -0.0188 0.0487 0.318 CD4T L1
ENSG00000162511 LAPTM5 28206 sc-eQTL 7.57e-01 -0.0167 0.054 0.318 CD4T L1
ENSG00000162517 PEF1 -858916 sc-eQTL 6.51e-03 0.153 0.0555 0.318 CD4T L1
ENSG00000186056 MATN1-AS1 67476 sc-eQTL 8.48e-02 0.0831 0.048 0.318 CD4T L1
ENSG00000287510 AL137857.1 54287 sc-eQTL 3.43e-01 -0.0549 0.0578 0.318 CD4T L1
ENSG00000060688 SNRNP40 -510808 sc-eQTL 3.04e-01 0.0942 0.0915 0.318 CD8T L1
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 8.52e-01 -0.0114 0.061 0.318 CD8T L1
ENSG00000134644 PUM1 -280011 sc-eQTL 7.38e-01 -0.018 0.0537 0.318 CD8T L1
ENSG00000162511 LAPTM5 28206 sc-eQTL 5.25e-01 -0.0332 0.0521 0.318 CD8T L1
ENSG00000162517 PEF1 -858916 sc-eQTL 1.88e-01 0.0845 0.064 0.318 CD8T L1
ENSG00000186056 MATN1-AS1 67476 sc-eQTL 1.51e-01 -0.0877 0.0609 0.318 CD8T L1
ENSG00000287510 AL137857.1 54287 sc-eQTL 1.41e-01 -0.113 0.0764 0.318 CD8T L1
ENSG00000060688 SNRNP40 -510808 sc-eQTL 1.08e-01 -0.128 0.0796 0.315 DC L1
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 2.87e-02 0.207 0.0937 0.315 DC L1
ENSG00000134644 PUM1 -280011 sc-eQTL 8.32e-01 0.0158 0.0743 0.315 DC L1
ENSG00000162511 LAPTM5 28206 sc-eQTL 7.98e-01 0.0136 0.0531 0.315 DC L1
ENSG00000162517 PEF1 -858916 sc-eQTL 5.37e-01 0.0532 0.086 0.315 DC L1
ENSG00000168528 SERINC2 -623585 sc-eQTL 6.84e-01 0.0356 0.0875 0.315 DC L1
ENSG00000284543 LINC01226 -720246 sc-eQTL 5.18e-01 -0.0375 0.0579 0.315 DC L1
ENSG00000287510 AL137857.1 54287 sc-eQTL 9.59e-02 -0.139 0.0833 0.315 DC L1
ENSG00000060688 SNRNP40 -510808 sc-eQTL 5.29e-02 0.123 0.063 0.318 Mono L1
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 6.33e-01 0.0377 0.0788 0.318 Mono L1
ENSG00000134644 PUM1 -280011 sc-eQTL 4.14e-01 -0.0413 0.0505 0.318 Mono L1
ENSG00000162511 LAPTM5 28206 sc-eQTL 4.52e-01 0.035 0.0464 0.318 Mono L1
ENSG00000162512 SDC3 -122778 sc-eQTL 5.54e-01 -0.0529 0.0893 0.318 Mono L1
ENSG00000162517 PEF1 -858916 sc-eQTL 2.75e-01 0.0684 0.0625 0.318 Mono L1
ENSG00000168528 SERINC2 -623585 sc-eQTL 4.63e-01 0.0704 0.0958 0.318 Mono L1
ENSG00000284543 LINC01226 -720246 sc-eQTL 9.49e-01 0.00544 0.0845 0.318 Mono L1
ENSG00000287510 AL137857.1 54287 sc-eQTL 2.06e-01 0.0934 0.0735 0.318 Mono L1
ENSG00000060688 SNRNP40 -510808 sc-eQTL 4.45e-01 0.0665 0.0868 0.318 NK L1
ENSG00000121753 ADGRB2 -978913 sc-eQTL 7.12e-01 0.0276 0.0748 0.318 NK L1
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 4.08e-01 -0.0492 0.0594 0.318 NK L1
ENSG00000134644 PUM1 -280011 sc-eQTL 8.23e-01 -0.014 0.0624 0.318 NK L1
ENSG00000162511 LAPTM5 28206 sc-eQTL 9.33e-01 -0.00606 0.0718 0.318 NK L1
ENSG00000162517 PEF1 -858916 sc-eQTL 4.17e-02 0.106 0.0519 0.318 NK L1
ENSG00000186056 MATN1-AS1 67476 sc-eQTL 2.20e-01 -0.099 0.0804 0.318 NK L1
ENSG00000287510 AL137857.1 54287 sc-eQTL 9.99e-01 -7.57e-05 0.0745 0.318 NK L1
ENSG00000060688 SNRNP40 -510808 sc-eQTL 1.51e-01 -0.0938 0.0651 0.318 Other_T L1
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 4.19e-01 -0.0565 0.0698 0.318 Other_T L1
ENSG00000134644 PUM1 -280011 sc-eQTL 1.05e-02 -0.16 0.0619 0.318 Other_T L1
ENSG00000162511 LAPTM5 28206 sc-eQTL 5.52e-01 -0.0307 0.0515 0.318 Other_T L1
ENSG00000162517 PEF1 -858916 sc-eQTL 8.69e-02 0.118 0.0684 0.318 Other_T L1
ENSG00000186056 MATN1-AS1 67476 sc-eQTL 3.04e-01 0.0867 0.0842 0.318 Other_T L1
ENSG00000287510 AL137857.1 54287 sc-eQTL 4.33e-01 0.069 0.0878 0.318 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -510808 sc-eQTL 5.31e-01 -0.065 0.104 0.314 B_Activated L2
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 4.27e-02 -0.211 0.103 0.314 B_Activated L2
ENSG00000134644 PUM1 -280011 sc-eQTL 5.25e-01 -0.0619 0.0972 0.314 B_Activated L2
ENSG00000162510 MATN1 62395 sc-eQTL 9.48e-01 0.00557 0.085 0.314 B_Activated L2
ENSG00000162511 LAPTM5 28206 sc-eQTL 8.23e-01 -0.0133 0.0593 0.314 B_Activated L2
ENSG00000162517 PEF1 -858916 sc-eQTL 5.18e-01 0.0652 0.101 0.314 B_Activated L2
ENSG00000186056 MATN1-AS1 67476 sc-eQTL 1.38e-02 0.234 0.094 0.314 B_Activated L2
ENSG00000287510 AL137857.1 54287 sc-eQTL 7.15e-01 0.031 0.0847 0.314 B_Activated L2
ENSG00000060688 SNRNP40 -510808 sc-eQTL 2.81e-01 0.107 0.0988 0.32 B_Intermediate L2
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 5.95e-01 0.0439 0.0825 0.32 B_Intermediate L2
ENSG00000134644 PUM1 -280011 sc-eQTL 7.85e-01 0.0213 0.0778 0.32 B_Intermediate L2
ENSG00000162510 MATN1 62395 sc-eQTL 3.31e-01 0.0788 0.0809 0.32 B_Intermediate L2
ENSG00000162511 LAPTM5 28206 sc-eQTL 6.33e-01 -0.0237 0.0497 0.32 B_Intermediate L2
ENSG00000162517 PEF1 -858916 sc-eQTL 7.35e-01 0.0313 0.0923 0.32 B_Intermediate L2
ENSG00000186056 MATN1-AS1 67476 sc-eQTL 7.81e-01 0.0195 0.0698 0.32 B_Intermediate L2
ENSG00000287510 AL137857.1 54287 sc-eQTL 8.16e-01 -0.0182 0.0781 0.32 B_Intermediate L2
ENSG00000060688 SNRNP40 -510808 sc-eQTL 2.72e-01 0.102 0.0931 0.319 B_Memory L2
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 7.36e-01 -0.029 0.0859 0.319 B_Memory L2
ENSG00000134644 PUM1 -280011 sc-eQTL 2.34e-01 -0.0889 0.0746 0.319 B_Memory L2
ENSG00000162510 MATN1 62395 sc-eQTL 3.23e-01 0.0707 0.0714 0.319 B_Memory L2
ENSG00000162511 LAPTM5 28206 sc-eQTL 6.44e-03 -0.172 0.0623 0.319 B_Memory L2
ENSG00000162517 PEF1 -858916 sc-eQTL 5.95e-01 -0.045 0.0847 0.319 B_Memory L2
ENSG00000186056 MATN1-AS1 67476 sc-eQTL 3.89e-01 -0.0626 0.0725 0.319 B_Memory L2
ENSG00000287510 AL137857.1 54287 sc-eQTL 3.89e-01 -0.0733 0.0849 0.319 B_Memory L2
ENSG00000060688 SNRNP40 -510808 sc-eQTL 5.46e-01 0.0538 0.0889 0.318 B_Naive1 L2
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 2.95e-01 -0.0804 0.0766 0.318 B_Naive1 L2
ENSG00000134644 PUM1 -280011 sc-eQTL 4.44e-02 -0.136 0.0671 0.318 B_Naive1 L2
ENSG00000162510 MATN1 62395 sc-eQTL 3.34e-01 -0.0664 0.0686 0.318 B_Naive1 L2
ENSG00000162511 LAPTM5 28206 sc-eQTL 5.32e-01 -0.0287 0.0459 0.318 B_Naive1 L2
ENSG00000162517 PEF1 -858916 sc-eQTL 5.72e-02 0.154 0.0803 0.318 B_Naive1 L2
ENSG00000186056 MATN1-AS1 67476 sc-eQTL 3.49e-02 -0.127 0.0597 0.318 B_Naive1 L2
ENSG00000287510 AL137857.1 54287 sc-eQTL 7.40e-01 -0.0247 0.0745 0.318 B_Naive1 L2
ENSG00000060688 SNRNP40 -510808 sc-eQTL 9.29e-01 0.00823 0.0923 0.318 B_Naive2 L2
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 1.41e-01 0.112 0.0758 0.318 B_Naive2 L2
ENSG00000134644 PUM1 -280011 sc-eQTL 4.19e-01 -0.0603 0.0745 0.318 B_Naive2 L2
ENSG00000162510 MATN1 62395 sc-eQTL 2.66e-01 -0.0796 0.0714 0.318 B_Naive2 L2
ENSG00000162511 LAPTM5 28206 sc-eQTL 3.96e-01 -0.0413 0.0485 0.318 B_Naive2 L2
ENSG00000162517 PEF1 -858916 sc-eQTL 4.11e-01 -0.0728 0.0883 0.318 B_Naive2 L2
ENSG00000186056 MATN1-AS1 67476 sc-eQTL 4.93e-02 -0.139 0.0702 0.318 B_Naive2 L2
ENSG00000287510 AL137857.1 54287 sc-eQTL 3.38e-01 -0.0733 0.0763 0.318 B_Naive2 L2
ENSG00000060688 SNRNP40 -510808 sc-eQTL 9.58e-01 0.0048 0.092 0.318 CD4_CTL L2
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 2.88e-01 0.0961 0.0902 0.318 CD4_CTL L2
ENSG00000134644 PUM1 -280011 sc-eQTL 9.65e-01 -0.0039 0.0887 0.318 CD4_CTL L2
ENSG00000162511 LAPTM5 28206 sc-eQTL 5.15e-01 0.0515 0.079 0.318 CD4_CTL L2
ENSG00000162517 PEF1 -858916 sc-eQTL 6.12e-01 0.0412 0.081 0.318 CD4_CTL L2
ENSG00000186056 MATN1-AS1 67476 sc-eQTL 5.78e-01 -0.0481 0.0864 0.318 CD4_CTL L2
ENSG00000287510 AL137857.1 54287 sc-eQTL 8.54e-01 0.0141 0.0763 0.318 CD4_CTL L2
ENSG00000060688 SNRNP40 -510808 sc-eQTL 7.05e-01 -0.0277 0.073 0.318 CD4_Naive L2
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 7.64e-01 -0.0194 0.0647 0.318 CD4_Naive L2
ENSG00000134644 PUM1 -280011 sc-eQTL 9.61e-01 -0.00254 0.0517 0.318 CD4_Naive L2
ENSG00000162511 LAPTM5 28206 sc-eQTL 9.22e-01 -0.00545 0.0554 0.318 CD4_Naive L2
ENSG00000162517 PEF1 -858916 sc-eQTL 3.26e-02 0.129 0.0601 0.318 CD4_Naive L2
ENSG00000186056 MATN1-AS1 67476 sc-eQTL 2.00e-02 0.13 0.0555 0.318 CD4_Naive L2
ENSG00000287510 AL137857.1 54287 sc-eQTL 6.02e-02 -0.121 0.064 0.318 CD4_Naive L2
ENSG00000060688 SNRNP40 -510808 sc-eQTL 1.34e-01 0.137 0.0908 0.318 CD4_TCM L2
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 9.77e-01 -0.00211 0.0736 0.318 CD4_TCM L2
ENSG00000134644 PUM1 -280011 sc-eQTL 3.36e-01 -0.0626 0.065 0.318 CD4_TCM L2
ENSG00000162511 LAPTM5 28206 sc-eQTL 1.94e-01 -0.0702 0.0538 0.318 CD4_TCM L2
ENSG00000162517 PEF1 -858916 sc-eQTL 8.38e-03 0.19 0.0712 0.318 CD4_TCM L2
ENSG00000186056 MATN1-AS1 67476 sc-eQTL 1.99e-01 -0.088 0.0683 0.318 CD4_TCM L2
ENSG00000287510 AL137857.1 54287 sc-eQTL 7.53e-01 -0.0241 0.0763 0.318 CD4_TCM L2
ENSG00000060688 SNRNP40 -510808 sc-eQTL 5.82e-01 0.0498 0.0903 0.318 CD4_TEM L2
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 8.61e-01 -0.0151 0.0861 0.318 CD4_TEM L2
ENSG00000134644 PUM1 -280011 sc-eQTL 3.89e-01 0.0617 0.0716 0.318 CD4_TEM L2
ENSG00000162511 LAPTM5 28206 sc-eQTL 2.34e-02 -0.164 0.0717 0.318 CD4_TEM L2
ENSG00000162517 PEF1 -858916 sc-eQTL 1.00e-01 0.133 0.0807 0.318 CD4_TEM L2
ENSG00000186056 MATN1-AS1 67476 sc-eQTL 6.88e-01 -0.0341 0.0848 0.318 CD4_TEM L2
ENSG00000287510 AL137857.1 54287 sc-eQTL 8.32e-01 -0.0178 0.0836 0.318 CD4_TEM L2
ENSG00000060688 SNRNP40 -510808 sc-eQTL 4.86e-01 0.0692 0.099 0.318 CD8_CTL L2
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 2.53e-01 0.0868 0.0758 0.318 CD8_CTL L2
ENSG00000134644 PUM1 -280011 sc-eQTL 7.76e-01 0.021 0.0738 0.318 CD8_CTL L2
ENSG00000162511 LAPTM5 28206 sc-eQTL 5.07e-01 0.0543 0.0817 0.318 CD8_CTL L2
ENSG00000162517 PEF1 -858916 sc-eQTL 4.07e-01 0.0591 0.0711 0.318 CD8_CTL L2
ENSG00000186056 MATN1-AS1 67476 sc-eQTL 2.01e-01 -0.11 0.0856 0.318 CD8_CTL L2
ENSG00000287510 AL137857.1 54287 sc-eQTL 6.44e-01 -0.0374 0.0808 0.318 CD8_CTL L2
ENSG00000060688 SNRNP40 -510808 sc-eQTL 8.19e-01 0.0209 0.0914 0.318 CD8_Naive L2
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 7.61e-01 -0.024 0.0788 0.318 CD8_Naive L2
ENSG00000134644 PUM1 -280011 sc-eQTL 3.41e-01 -0.0604 0.0633 0.318 CD8_Naive L2
ENSG00000162511 LAPTM5 28206 sc-eQTL 7.69e-01 -0.0179 0.0608 0.318 CD8_Naive L2
ENSG00000162517 PEF1 -858916 sc-eQTL 3.99e-01 0.0714 0.0844 0.318 CD8_Naive L2
ENSG00000186056 MATN1-AS1 67476 sc-eQTL 7.81e-02 -0.133 0.0753 0.318 CD8_Naive L2
ENSG00000287510 AL137857.1 54287 sc-eQTL 4.87e-01 -0.0575 0.0825 0.318 CD8_Naive L2
ENSG00000060688 SNRNP40 -510808 sc-eQTL 5.30e-01 -0.0622 0.0989 0.317 CD8_TCM L2
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 6.91e-02 0.164 0.0899 0.317 CD8_TCM L2
ENSG00000134644 PUM1 -280011 sc-eQTL 5.07e-02 -0.166 0.0845 0.317 CD8_TCM L2
ENSG00000162511 LAPTM5 28206 sc-eQTL 9.93e-01 -0.000813 0.0893 0.317 CD8_TCM L2
ENSG00000162517 PEF1 -858916 sc-eQTL 5.75e-01 0.0512 0.0912 0.317 CD8_TCM L2
ENSG00000186056 MATN1-AS1 67476 sc-eQTL 3.47e-01 0.0777 0.0825 0.317 CD8_TCM L2
ENSG00000287510 AL137857.1 54287 sc-eQTL 2.21e-01 -0.102 0.0832 0.317 CD8_TCM L2
ENSG00000060688 SNRNP40 -510808 sc-eQTL 5.49e-01 0.0581 0.097 0.313 CD8_TEM L2
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 2.78e-01 -0.101 0.0928 0.313 CD8_TEM L2
ENSG00000134644 PUM1 -280011 sc-eQTL 7.67e-01 -0.0283 0.0951 0.313 CD8_TEM L2
ENSG00000162511 LAPTM5 28206 sc-eQTL 1.69e-01 0.123 0.089 0.313 CD8_TEM L2
ENSG00000162517 PEF1 -858916 sc-eQTL 4.25e-01 0.0672 0.0841 0.313 CD8_TEM L2
ENSG00000186056 MATN1-AS1 67476 sc-eQTL 1.37e-01 0.138 0.0923 0.313 CD8_TEM L2
ENSG00000287510 AL137857.1 54287 sc-eQTL 3.17e-01 -0.084 0.0838 0.313 CD8_TEM L2
ENSG00000060688 SNRNP40 -510808 sc-eQTL 7.24e-03 -0.253 0.0933 0.32 MAIT L2
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 9.62e-01 -0.00402 0.0841 0.32 MAIT L2
ENSG00000134644 PUM1 -280011 sc-eQTL 1.11e-01 -0.128 0.0801 0.32 MAIT L2
ENSG00000162511 LAPTM5 28206 sc-eQTL 6.12e-01 0.0386 0.076 0.32 MAIT L2
ENSG00000162517 PEF1 -858916 sc-eQTL 3.62e-01 0.0762 0.0834 0.32 MAIT L2
ENSG00000186056 MATN1-AS1 67476 sc-eQTL 1.74e-01 0.115 0.0843 0.32 MAIT L2
ENSG00000287510 AL137857.1 54287 sc-eQTL 9.58e-01 0.00464 0.0873 0.32 MAIT L2
ENSG00000060688 SNRNP40 -510808 sc-eQTL 1.39e-01 0.143 0.0967 0.32 NK_CD56bright L2
ENSG00000121753 ADGRB2 -978913 sc-eQTL 3.87e-02 0.157 0.0753 0.32 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 6.66e-01 -0.0355 0.0821 0.32 NK_CD56bright L2
ENSG00000134644 PUM1 -280011 sc-eQTL 4.68e-01 0.0626 0.0861 0.32 NK_CD56bright L2
ENSG00000162511 LAPTM5 28206 sc-eQTL 5.21e-02 0.165 0.0843 0.32 NK_CD56bright L2
ENSG00000162517 PEF1 -858916 sc-eQTL 4.81e-01 0.0583 0.0825 0.32 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 67476 sc-eQTL 3.53e-01 0.0794 0.0853 0.32 NK_CD56bright L2
ENSG00000287510 AL137857.1 54287 sc-eQTL 9.36e-01 0.00673 0.0842 0.32 NK_CD56bright L2
ENSG00000060688 SNRNP40 -510808 sc-eQTL 4.48e-01 0.0694 0.0913 0.319 NK_CD56dim L2
ENSG00000121753 ADGRB2 -978913 sc-eQTL 7.18e-01 -0.0291 0.0804 0.319 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 8.57e-01 -0.0122 0.0676 0.319 NK_CD56dim L2
ENSG00000134644 PUM1 -280011 sc-eQTL 6.15e-01 0.0349 0.0693 0.319 NK_CD56dim L2
ENSG00000162511 LAPTM5 28206 sc-eQTL 5.58e-01 -0.0433 0.0739 0.319 NK_CD56dim L2
ENSG00000162517 PEF1 -858916 sc-eQTL 9.02e-01 -0.00809 0.0658 0.319 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 67476 sc-eQTL 1.85e-01 -0.123 0.0922 0.319 NK_CD56dim L2
ENSG00000287510 AL137857.1 54287 sc-eQTL 5.04e-01 -0.0511 0.0763 0.319 NK_CD56dim L2
ENSG00000060688 SNRNP40 -510808 sc-eQTL 9.22e-01 0.00943 0.0966 0.308 NK_HLA L2
ENSG00000121753 ADGRB2 -978913 sc-eQTL 1.80e-01 -0.103 0.0764 0.308 NK_HLA L2
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 2.67e-01 -0.0958 0.086 0.308 NK_HLA L2
ENSG00000134644 PUM1 -280011 sc-eQTL 5.42e-01 -0.0513 0.084 0.308 NK_HLA L2
ENSG00000162511 LAPTM5 28206 sc-eQTL 3.82e-01 0.0702 0.0801 0.308 NK_HLA L2
ENSG00000162517 PEF1 -858916 sc-eQTL 1.97e-01 0.116 0.09 0.308 NK_HLA L2
ENSG00000186056 MATN1-AS1 67476 sc-eQTL 1.35e-01 -0.128 0.0849 0.308 NK_HLA L2
ENSG00000287510 AL137857.1 54287 sc-eQTL 3.54e-01 -0.0764 0.0824 0.308 NK_HLA L2
ENSG00000060688 SNRNP40 -510808 sc-eQTL 7.32e-01 -0.0303 0.0884 0.319 NK_cytokine L2
ENSG00000121753 ADGRB2 -978913 sc-eQTL 3.28e-01 0.0781 0.0797 0.319 NK_cytokine L2
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 2.88e-01 -0.0733 0.0688 0.319 NK_cytokine L2
ENSG00000134644 PUM1 -280011 sc-eQTL 9.25e-01 -0.00699 0.0746 0.319 NK_cytokine L2
ENSG00000162511 LAPTM5 28206 sc-eQTL 2.63e-01 0.092 0.0819 0.319 NK_cytokine L2
ENSG00000162517 PEF1 -858916 sc-eQTL 9.31e-03 0.181 0.0689 0.319 NK_cytokine L2
ENSG00000186056 MATN1-AS1 67476 sc-eQTL 7.08e-01 0.0327 0.087 0.319 NK_cytokine L2
ENSG00000287510 AL137857.1 54287 sc-eQTL 6.02e-01 0.0423 0.0809 0.319 NK_cytokine L2
ENSG00000060688 SNRNP40 -510808 sc-eQTL 1.64e-01 0.141 0.101 0.315 PB L2
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 8.03e-01 0.0295 0.118 0.315 PB L2
ENSG00000134644 PUM1 -280011 sc-eQTL 3.34e-01 0.0992 0.102 0.315 PB L2
ENSG00000162510 MATN1 62395 sc-eQTL 7.44e-01 -0.0312 0.0956 0.315 PB L2
ENSG00000162511 LAPTM5 28206 sc-eQTL 3.74e-01 0.0608 0.0681 0.315 PB L2
ENSG00000162517 PEF1 -858916 sc-eQTL 8.25e-02 0.182 0.104 0.315 PB L2
ENSG00000186056 MATN1-AS1 67476 sc-eQTL 6.24e-02 -0.173 0.0921 0.315 PB L2
ENSG00000287510 AL137857.1 54287 sc-eQTL 2.86e-01 -0.106 0.099 0.315 PB L2
ENSG00000060688 SNRNP40 -510808 sc-eQTL 3.47e-01 0.0668 0.0709 0.322 Pro_T L2
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 5.05e-01 -0.0602 0.0902 0.322 Pro_T L2
ENSG00000134644 PUM1 -280011 sc-eQTL 1.35e-01 -0.126 0.0837 0.322 Pro_T L2
ENSG00000162511 LAPTM5 28206 sc-eQTL 9.33e-01 -0.0051 0.0604 0.322 Pro_T L2
ENSG00000162517 PEF1 -858916 sc-eQTL 7.72e-02 0.156 0.0879 0.322 Pro_T L2
ENSG00000186056 MATN1-AS1 67476 sc-eQTL 9.54e-01 -0.00485 0.0844 0.322 Pro_T L2
ENSG00000287510 AL137857.1 54287 sc-eQTL 6.84e-01 0.0316 0.0776 0.322 Pro_T L2
ENSG00000060688 SNRNP40 -510808 sc-eQTL 1.70e-02 0.221 0.0917 0.318 Treg L2
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 6.61e-01 0.0395 0.0899 0.318 Treg L2
ENSG00000134644 PUM1 -280011 sc-eQTL 5.53e-02 -0.137 0.0713 0.318 Treg L2
ENSG00000162511 LAPTM5 28206 sc-eQTL 8.37e-01 0.0169 0.0824 0.318 Treg L2
ENSG00000162517 PEF1 -858916 sc-eQTL 1.36e-01 0.133 0.0885 0.318 Treg L2
ENSG00000186056 MATN1-AS1 67476 sc-eQTL 2.08e-01 0.106 0.0836 0.318 Treg L2
ENSG00000287510 AL137857.1 54287 sc-eQTL 9.16e-01 0.00891 0.0838 0.318 Treg L2
ENSG00000060688 SNRNP40 -510808 sc-eQTL 1.85e-01 -0.125 0.0935 0.322 cDC L2
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 8.36e-02 0.175 0.101 0.322 cDC L2
ENSG00000134644 PUM1 -280011 sc-eQTL 7.88e-01 0.0235 0.0873 0.322 cDC L2
ENSG00000162511 LAPTM5 28206 sc-eQTL 7.82e-01 0.017 0.0612 0.322 cDC L2
ENSG00000162517 PEF1 -858916 sc-eQTL 8.05e-01 0.0219 0.0887 0.322 cDC L2
ENSG00000168528 SERINC2 -623585 sc-eQTL 1.59e-01 0.111 0.0782 0.322 cDC L2
ENSG00000284543 LINC01226 -720246 sc-eQTL 9.48e-01 0.00502 0.0773 0.322 cDC L2
ENSG00000287510 AL137857.1 54287 sc-eQTL 5.32e-01 -0.0521 0.0831 0.322 cDC L2
ENSG00000060688 SNRNP40 -510808 sc-eQTL 1.51e-01 0.109 0.0755 0.318 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 7.39e-01 -0.0283 0.0846 0.318 cMono_IL1B L2
ENSG00000134644 PUM1 -280011 sc-eQTL 3.56e-01 -0.0529 0.0572 0.318 cMono_IL1B L2
ENSG00000162511 LAPTM5 28206 sc-eQTL 5.91e-01 0.027 0.0502 0.318 cMono_IL1B L2
ENSG00000162512 SDC3 -122778 sc-eQTL 8.30e-01 0.0204 0.0947 0.318 cMono_IL1B L2
ENSG00000162517 PEF1 -858916 sc-eQTL 1.75e-01 0.105 0.0771 0.318 cMono_IL1B L2
ENSG00000168528 SERINC2 -623585 sc-eQTL 5.98e-01 0.0506 0.0958 0.318 cMono_IL1B L2
ENSG00000284543 LINC01226 -720246 sc-eQTL 9.14e-01 -0.00916 0.0848 0.318 cMono_IL1B L2
ENSG00000287510 AL137857.1 54287 sc-eQTL 6.35e-02 0.146 0.0784 0.318 cMono_IL1B L2
ENSG00000060688 SNRNP40 -510808 sc-eQTL 1.32e-01 0.119 0.0786 0.318 cMono_S100A L2
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 3.89e-01 0.0804 0.0932 0.318 cMono_S100A L2
ENSG00000134644 PUM1 -280011 sc-eQTL 6.78e-01 0.028 0.0674 0.318 cMono_S100A L2
ENSG00000162511 LAPTM5 28206 sc-eQTL 6.76e-01 -0.0217 0.0518 0.318 cMono_S100A L2
ENSG00000162512 SDC3 -122778 sc-eQTL 9.52e-01 -0.00538 0.0895 0.318 cMono_S100A L2
ENSG00000162517 PEF1 -858916 sc-eQTL 6.27e-01 -0.0394 0.0808 0.318 cMono_S100A L2
ENSG00000168528 SERINC2 -623585 sc-eQTL 6.13e-01 0.048 0.0948 0.318 cMono_S100A L2
ENSG00000284543 LINC01226 -720246 sc-eQTL 7.14e-01 -0.0283 0.077 0.318 cMono_S100A L2
ENSG00000287510 AL137857.1 54287 sc-eQTL 7.89e-01 0.0207 0.0773 0.318 cMono_S100A L2
ENSG00000060688 SNRNP40 -510808 sc-eQTL 1.21e-01 0.177 0.114 0.309 gdT L2
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 9.23e-01 0.00952 0.0986 0.309 gdT L2
ENSG00000134644 PUM1 -280011 sc-eQTL 3.19e-01 -0.101 0.101 0.309 gdT L2
ENSG00000162511 LAPTM5 28206 sc-eQTL 9.90e-01 0.00143 0.11 0.309 gdT L2
ENSG00000162517 PEF1 -858916 sc-eQTL 1.05e-01 0.163 0.1 0.309 gdT L2
ENSG00000186056 MATN1-AS1 67476 sc-eQTL 5.63e-01 -0.0591 0.102 0.309 gdT L2
ENSG00000287510 AL137857.1 54287 sc-eQTL 3.12e-01 0.0999 0.0984 0.309 gdT L2
ENSG00000060688 SNRNP40 -510808 sc-eQTL 2.57e-01 0.0984 0.0865 0.316 intMono L2
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 9.07e-01 -0.0109 0.0933 0.316 intMono L2
ENSG00000134644 PUM1 -280011 sc-eQTL 5.83e-01 -0.0435 0.0791 0.316 intMono L2
ENSG00000162511 LAPTM5 28206 sc-eQTL 3.86e-01 -0.0539 0.062 0.316 intMono L2
ENSG00000162512 SDC3 -122778 sc-eQTL 3.82e-01 -0.0744 0.0849 0.316 intMono L2
ENSG00000162517 PEF1 -858916 sc-eQTL 6.07e-01 0.0461 0.0893 0.316 intMono L2
ENSG00000168528 SERINC2 -623585 sc-eQTL 3.51e-01 0.0831 0.0888 0.316 intMono L2
ENSG00000284543 LINC01226 -720246 sc-eQTL 5.74e-01 0.0475 0.0843 0.316 intMono L2
ENSG00000287510 AL137857.1 54287 sc-eQTL 6.07e-01 -0.0434 0.0843 0.316 intMono L2
ENSG00000060688 SNRNP40 -510808 sc-eQTL 5.35e-01 0.0505 0.0813 0.305 ncMono L2
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 6.01e-01 -0.0454 0.0867 0.305 ncMono L2
ENSG00000134644 PUM1 -280011 sc-eQTL 1.00e+00 -4.12e-05 0.0709 0.305 ncMono L2
ENSG00000162511 LAPTM5 28206 sc-eQTL 8.90e-01 0.00888 0.0644 0.305 ncMono L2
ENSG00000162512 SDC3 -122778 sc-eQTL 2.83e-01 -0.0775 0.0719 0.305 ncMono L2
ENSG00000162517 PEF1 -858916 sc-eQTL 7.06e-01 0.0313 0.0827 0.305 ncMono L2
ENSG00000168528 SERINC2 -623585 sc-eQTL 5.19e-01 0.0508 0.0787 0.305 ncMono L2
ENSG00000284543 LINC01226 -720246 sc-eQTL 5.19e-01 -0.0508 0.0786 0.305 ncMono L2
ENSG00000287510 AL137857.1 54287 sc-eQTL 4.04e-02 -0.167 0.0807 0.305 ncMono L2
ENSG00000060688 SNRNP40 -510808 sc-eQTL 9.29e-01 -0.00854 0.0959 0.316 pDC L2
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 1.30e-01 0.159 0.104 0.316 pDC L2
ENSG00000134644 PUM1 -280011 sc-eQTL 9.83e-01 -0.00184 0.0873 0.316 pDC L2
ENSG00000162511 LAPTM5 28206 sc-eQTL 5.91e-01 0.0437 0.0811 0.316 pDC L2
ENSG00000162517 PEF1 -858916 sc-eQTL 4.06e-01 0.0876 0.105 0.316 pDC L2
ENSG00000168528 SERINC2 -623585 sc-eQTL 9.08e-01 -0.0114 0.0984 0.316 pDC L2
ENSG00000284543 LINC01226 -720246 sc-eQTL 4.23e-01 -0.0613 0.0762 0.316 pDC L2
ENSG00000287510 AL137857.1 54287 sc-eQTL 8.74e-01 0.0143 0.0899 0.316 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -510808 sc-eQTL 1.24e-01 0.142 0.092 0.318 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 6.82e-01 0.0316 0.077 0.318 B_Memory LOneK1K
ENSG00000134644 PUM1 -280011 sc-eQTL 9.25e-01 -0.00641 0.0683 0.318 B_Memory LOneK1K
ENSG00000162510 MATN1 62395 sc-eQTL 5.36e-01 0.0482 0.0777 0.318 B_Memory LOneK1K
ENSG00000162511 LAPTM5 28206 sc-eQTL 9.91e-02 -0.0805 0.0486 0.318 B_Memory LOneK1K
ENSG00000162517 PEF1 -858916 sc-eQTL 9.65e-01 -0.00352 0.081 0.318 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 67476 sc-eQTL 5.97e-01 0.0342 0.0646 0.318 B_Memory LOneK1K
ENSG00000287510 AL137857.1 54287 sc-eQTL 4.87e-01 0.049 0.0704 0.318 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -510808 sc-eQTL 7.64e-01 -0.0262 0.0871 0.318 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 9.80e-01 0.00173 0.0689 0.318 B_Naive LOneK1K
ENSG00000134644 PUM1 -280011 sc-eQTL 2.38e-02 -0.147 0.0644 0.318 B_Naive LOneK1K
ENSG00000162510 MATN1 62395 sc-eQTL 1.14e-01 -0.0991 0.0624 0.318 B_Naive LOneK1K
ENSG00000162511 LAPTM5 28206 sc-eQTL 7.70e-01 -0.0129 0.0442 0.318 B_Naive LOneK1K
ENSG00000162517 PEF1 -858916 sc-eQTL 2.78e-01 0.0876 0.0804 0.318 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 67476 sc-eQTL 7.82e-03 -0.151 0.0561 0.318 B_Naive LOneK1K
ENSG00000287510 AL137857.1 54287 sc-eQTL 8.94e-01 0.00908 0.0678 0.318 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -510808 sc-eQTL 6.65e-02 0.132 0.0716 0.318 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 6.46e-01 0.0376 0.0817 0.318 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -280011 sc-eQTL 3.94e-01 -0.0445 0.052 0.318 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 28206 sc-eQTL 5.73e-01 0.0258 0.0458 0.318 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -122778 sc-eQTL 9.34e-01 0.00778 0.0935 0.318 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -858916 sc-eQTL 5.64e-01 0.0379 0.0657 0.318 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -623585 sc-eQTL 5.70e-01 0.0546 0.0961 0.318 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -720246 sc-eQTL 8.32e-01 0.0167 0.0788 0.318 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 54287 sc-eQTL 9.96e-02 0.121 0.0733 0.318 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -510808 sc-eQTL 5.76e-01 0.0433 0.0773 0.317 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 8.27e-01 -0.0185 0.0847 0.317 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -280011 sc-eQTL 9.92e-01 0.000729 0.0694 0.317 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 28206 sc-eQTL 7.56e-01 -0.0172 0.0555 0.317 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -122778 sc-eQTL 5.14e-01 -0.0529 0.081 0.317 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -858916 sc-eQTL 7.21e-01 0.0263 0.0736 0.317 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -623585 sc-eQTL 6.04e-01 0.0436 0.084 0.317 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -720246 sc-eQTL 6.74e-01 0.0335 0.0797 0.317 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 54287 sc-eQTL 1.56e-01 -0.113 0.0795 0.317 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -510808 sc-eQTL 5.50e-01 0.0521 0.0871 0.319 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -978913 sc-eQTL 9.20e-01 0.00746 0.0742 0.319 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -511002 sc-eQTL 3.77e-01 -0.0526 0.0594 0.319 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -280011 sc-eQTL 6.82e-01 -0.0267 0.0652 0.319 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 28206 sc-eQTL 6.58e-01 -0.0323 0.0729 0.319 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -858916 sc-eQTL 3.16e-02 0.119 0.0548 0.319 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 67476 sc-eQTL 1.03e-01 -0.137 0.0836 0.319 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 54287 sc-eQTL 7.59e-01 -0.0223 0.0726 0.319 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162511 LAPTM5 28206 eQTL 0.00742 0.0269 0.01 0.0 0.0 0.335
ENSG00000186056 MATN1-AS1 67476 eQTL 1.21e-02 -0.0318 0.0126 0.0 0.0 0.335
ENSG00000284543 LINC01226 -720301 eQTL 0.0363 -0.0667 0.0318 0.0 0.0 0.335

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina