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Genes within 1Mb (chr1:30785877:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -510911 sc-eQTL 3.80e-01 0.0743 0.0844 0.321 B L1
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 9.41e-01 -0.00498 0.0677 0.321 B L1
ENSG00000134644 PUM1 -280114 sc-eQTL 6.27e-01 0.0276 0.0567 0.321 B L1
ENSG00000162510 MATN1 62292 sc-eQTL 9.83e-01 0.00126 0.0597 0.321 B L1
ENSG00000162511 LAPTM5 28103 sc-eQTL 5.05e-02 0.0911 0.0463 0.321 B L1
ENSG00000162517 PEF1 -859019 sc-eQTL 3.98e-01 -0.0597 0.0704 0.321 B L1
ENSG00000186056 MATN1-AS1 67373 sc-eQTL 3.48e-01 0.0514 0.0547 0.321 B L1
ENSG00000287510 AL137857.1 54184 sc-eQTL 5.54e-01 0.0384 0.0648 0.321 B L1
ENSG00000060688 SNRNP40 -510911 sc-eQTL 5.25e-01 0.047 0.0738 0.321 CD4T L1
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 9.37e-01 0.00459 0.0577 0.321 CD4T L1
ENSG00000134644 PUM1 -280114 sc-eQTL 2.53e-01 -0.0587 0.0512 0.321 CD4T L1
ENSG00000162511 LAPTM5 28103 sc-eQTL 8.34e-02 -0.0983 0.0565 0.321 CD4T L1
ENSG00000162517 PEF1 -859019 sc-eQTL 1.35e-01 -0.0888 0.0592 0.321 CD4T L1
ENSG00000186056 MATN1-AS1 67373 sc-eQTL 6.93e-01 -0.0201 0.0509 0.321 CD4T L1
ENSG00000287510 AL137857.1 54184 sc-eQTL 1.21e-01 0.0944 0.0606 0.321 CD4T L1
ENSG00000060688 SNRNP40 -510911 sc-eQTL 4.21e-01 -0.0775 0.0962 0.321 CD8T L1
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 5.42e-01 -0.0391 0.0641 0.321 CD8T L1
ENSG00000134644 PUM1 -280114 sc-eQTL 2.93e-01 -0.0593 0.0563 0.321 CD8T L1
ENSG00000162511 LAPTM5 28103 sc-eQTL 4.00e-01 0.0462 0.0548 0.321 CD8T L1
ENSG00000162517 PEF1 -859019 sc-eQTL 7.06e-01 -0.0255 0.0675 0.321 CD8T L1
ENSG00000186056 MATN1-AS1 67373 sc-eQTL 1.88e-01 0.0845 0.064 0.321 CD8T L1
ENSG00000287510 AL137857.1 54184 sc-eQTL 2.41e-01 0.0946 0.0805 0.321 CD8T L1
ENSG00000060688 SNRNP40 -510911 sc-eQTL 6.19e-01 -0.0432 0.0868 0.318 DC L1
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 1.16e-02 -0.258 0.101 0.318 DC L1
ENSG00000134644 PUM1 -280114 sc-eQTL 2.44e-01 -0.0937 0.0803 0.318 DC L1
ENSG00000162511 LAPTM5 28103 sc-eQTL 2.02e-01 0.0733 0.0573 0.318 DC L1
ENSG00000162517 PEF1 -859019 sc-eQTL 7.57e-01 0.0289 0.0932 0.318 DC L1
ENSG00000168528 SERINC2 -623688 sc-eQTL 2.56e-01 0.108 0.0945 0.318 DC L1
ENSG00000284543 LINC01226 -720349 sc-eQTL 5.30e-01 0.0394 0.0628 0.318 DC L1
ENSG00000287510 AL137857.1 54184 sc-eQTL 1.51e-01 0.13 0.0905 0.318 DC L1
ENSG00000060688 SNRNP40 -510911 sc-eQTL 5.43e-02 -0.128 0.0659 0.321 Mono L1
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 9.58e-01 -0.00436 0.0825 0.321 Mono L1
ENSG00000134644 PUM1 -280114 sc-eQTL 9.06e-01 -0.00622 0.0529 0.321 Mono L1
ENSG00000162511 LAPTM5 28103 sc-eQTL 1.27e-01 0.074 0.0484 0.321 Mono L1
ENSG00000162512 SDC3 -122881 sc-eQTL 1.76e-01 0.126 0.0931 0.321 Mono L1
ENSG00000162517 PEF1 -859019 sc-eQTL 1.88e-02 -0.153 0.0647 0.321 Mono L1
ENSG00000168528 SERINC2 -623688 sc-eQTL 9.70e-01 -0.00374 0.1 0.321 Mono L1
ENSG00000284543 LINC01226 -720349 sc-eQTL 2.40e-01 -0.104 0.0881 0.321 Mono L1
ENSG00000287510 AL137857.1 54184 sc-eQTL 2.22e-01 0.0942 0.0769 0.321 Mono L1
ENSG00000060688 SNRNP40 -510911 sc-eQTL 2.78e-01 -0.1 0.0923 0.322 NK L1
ENSG00000121753 ADGRB2 -979016 sc-eQTL 2.17e-01 0.0984 0.0794 0.322 NK L1
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 6.56e-01 -0.0282 0.0633 0.322 NK L1
ENSG00000134644 PUM1 -280114 sc-eQTL 8.38e-01 0.0136 0.0665 0.322 NK L1
ENSG00000162511 LAPTM5 28103 sc-eQTL 1.46e-01 0.111 0.0761 0.322 NK L1
ENSG00000162517 PEF1 -859019 sc-eQTL 2.27e-01 -0.0674 0.0556 0.322 NK L1
ENSG00000186056 MATN1-AS1 67373 sc-eQTL 8.61e-01 0.0151 0.0859 0.322 NK L1
ENSG00000287510 AL137857.1 54184 sc-eQTL 9.16e-01 -0.00841 0.0794 0.322 NK L1
ENSG00000060688 SNRNP40 -510911 sc-eQTL 1.43e-01 0.103 0.0698 0.321 Other_T L1
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 1.07e-01 0.121 0.0745 0.321 Other_T L1
ENSG00000134644 PUM1 -280114 sc-eQTL 1.22e-01 0.104 0.067 0.321 Other_T L1
ENSG00000162511 LAPTM5 28103 sc-eQTL 5.61e-01 -0.0322 0.0552 0.321 Other_T L1
ENSG00000162517 PEF1 -859019 sc-eQTL 8.77e-01 -0.0115 0.0738 0.321 Other_T L1
ENSG00000186056 MATN1-AS1 67373 sc-eQTL 8.66e-01 0.0153 0.0905 0.321 Other_T L1
ENSG00000287510 AL137857.1 54184 sc-eQTL 4.21e-01 -0.0758 0.0941 0.321 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -510911 sc-eQTL 4.86e-01 -0.0781 0.112 0.309 B_Activated L2
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 4.37e-01 -0.088 0.113 0.309 B_Activated L2
ENSG00000134644 PUM1 -280114 sc-eQTL 4.86e-01 0.0734 0.105 0.309 B_Activated L2
ENSG00000162510 MATN1 62292 sc-eQTL 9.43e-01 0.0066 0.0919 0.309 B_Activated L2
ENSG00000162511 LAPTM5 28103 sc-eQTL 6.41e-01 0.0299 0.0641 0.309 B_Activated L2
ENSG00000162517 PEF1 -859019 sc-eQTL 9.33e-01 0.00921 0.109 0.309 B_Activated L2
ENSG00000186056 MATN1-AS1 67373 sc-eQTL 3.69e-01 -0.0929 0.103 0.309 B_Activated L2
ENSG00000287510 AL137857.1 54184 sc-eQTL 3.96e-01 0.0778 0.0914 0.309 B_Activated L2
ENSG00000060688 SNRNP40 -510911 sc-eQTL 8.61e-01 0.0182 0.103 0.32 B_Intermediate L2
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 2.83e-01 -0.0926 0.086 0.32 B_Intermediate L2
ENSG00000134644 PUM1 -280114 sc-eQTL 5.54e-01 -0.0482 0.0813 0.32 B_Intermediate L2
ENSG00000162510 MATN1 62292 sc-eQTL 9.09e-01 -0.00968 0.0847 0.32 B_Intermediate L2
ENSG00000162511 LAPTM5 28103 sc-eQTL 8.63e-01 0.00895 0.052 0.32 B_Intermediate L2
ENSG00000162517 PEF1 -859019 sc-eQTL 8.66e-01 -0.0164 0.0965 0.32 B_Intermediate L2
ENSG00000186056 MATN1-AS1 67373 sc-eQTL 9.60e-02 -0.121 0.0725 0.32 B_Intermediate L2
ENSG00000287510 AL137857.1 54184 sc-eQTL 9.54e-01 -0.00475 0.0816 0.32 B_Intermediate L2
ENSG00000060688 SNRNP40 -510911 sc-eQTL 5.78e-01 0.0558 0.1 0.319 B_Memory L2
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 8.83e-01 0.0135 0.0922 0.319 B_Memory L2
ENSG00000134644 PUM1 -280114 sc-eQTL 7.85e-01 0.0219 0.0803 0.319 B_Memory L2
ENSG00000162510 MATN1 62292 sc-eQTL 1.21e-01 -0.119 0.0764 0.319 B_Memory L2
ENSG00000162511 LAPTM5 28103 sc-eQTL 4.37e-02 0.137 0.0674 0.319 B_Memory L2
ENSG00000162517 PEF1 -859019 sc-eQTL 5.10e-01 -0.0599 0.0908 0.319 B_Memory L2
ENSG00000186056 MATN1-AS1 67373 sc-eQTL 1.85e-02 0.183 0.0769 0.319 B_Memory L2
ENSG00000287510 AL137857.1 54184 sc-eQTL 5.04e-01 -0.0609 0.0911 0.319 B_Memory L2
ENSG00000060688 SNRNP40 -510911 sc-eQTL 9.16e-01 -0.00975 0.0925 0.321 B_Naive1 L2
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 6.14e-01 0.0403 0.0798 0.321 B_Naive1 L2
ENSG00000134644 PUM1 -280114 sc-eQTL 2.28e-01 0.0849 0.0702 0.321 B_Naive1 L2
ENSG00000162510 MATN1 62292 sc-eQTL 6.61e-01 -0.0314 0.0715 0.321 B_Naive1 L2
ENSG00000162511 LAPTM5 28103 sc-eQTL 8.66e-02 0.0817 0.0474 0.321 B_Naive1 L2
ENSG00000162517 PEF1 -859019 sc-eQTL 1.24e-01 -0.129 0.0837 0.321 B_Naive1 L2
ENSG00000186056 MATN1-AS1 67373 sc-eQTL 5.95e-01 0.0334 0.0627 0.321 B_Naive1 L2
ENSG00000287510 AL137857.1 54184 sc-eQTL 2.12e-01 0.0967 0.0772 0.321 B_Naive1 L2
ENSG00000060688 SNRNP40 -510911 sc-eQTL 1.26e-01 0.15 0.098 0.32 B_Naive2 L2
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 7.80e-01 -0.0228 0.0814 0.32 B_Naive2 L2
ENSG00000134644 PUM1 -280114 sc-eQTL 6.26e-01 0.0389 0.0796 0.32 B_Naive2 L2
ENSG00000162510 MATN1 62292 sc-eQTL 3.78e-01 0.0674 0.0763 0.32 B_Naive2 L2
ENSG00000162511 LAPTM5 28103 sc-eQTL 3.40e-02 0.11 0.0514 0.32 B_Naive2 L2
ENSG00000162517 PEF1 -859019 sc-eQTL 8.74e-02 0.161 0.0938 0.32 B_Naive2 L2
ENSG00000186056 MATN1-AS1 67373 sc-eQTL 4.01e-01 0.0635 0.0755 0.32 B_Naive2 L2
ENSG00000287510 AL137857.1 54184 sc-eQTL 6.82e-01 0.0335 0.0816 0.32 B_Naive2 L2
ENSG00000060688 SNRNP40 -510911 sc-eQTL 7.67e-01 -0.0292 0.0985 0.316 CD4_CTL L2
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 2.17e-01 -0.12 0.0966 0.316 CD4_CTL L2
ENSG00000134644 PUM1 -280114 sc-eQTL 2.59e-01 -0.107 0.0948 0.316 CD4_CTL L2
ENSG00000162511 LAPTM5 28103 sc-eQTL 6.64e-01 -0.0369 0.0847 0.316 CD4_CTL L2
ENSG00000162517 PEF1 -859019 sc-eQTL 9.85e-01 -0.00162 0.0869 0.316 CD4_CTL L2
ENSG00000186056 MATN1-AS1 67373 sc-eQTL 2.62e-01 0.104 0.0924 0.316 CD4_CTL L2
ENSG00000287510 AL137857.1 54184 sc-eQTL 2.25e-01 -0.0991 0.0815 0.316 CD4_CTL L2
ENSG00000060688 SNRNP40 -510911 sc-eQTL 2.33e-01 0.0924 0.0772 0.321 CD4_Naive L2
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 6.03e-01 -0.0358 0.0686 0.321 CD4_Naive L2
ENSG00000134644 PUM1 -280114 sc-eQTL 5.51e-01 -0.0327 0.0548 0.321 CD4_Naive L2
ENSG00000162511 LAPTM5 28103 sc-eQTL 5.80e-02 -0.111 0.0583 0.321 CD4_Naive L2
ENSG00000162517 PEF1 -859019 sc-eQTL 9.04e-01 -0.0078 0.0644 0.321 CD4_Naive L2
ENSG00000186056 MATN1-AS1 67373 sc-eQTL 6.14e-01 0.0301 0.0596 0.321 CD4_Naive L2
ENSG00000287510 AL137857.1 54184 sc-eQTL 3.75e-01 0.0608 0.0684 0.321 CD4_Naive L2
ENSG00000060688 SNRNP40 -510911 sc-eQTL 7.38e-01 -0.032 0.0954 0.321 CD4_TCM L2
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 1.89e-01 0.101 0.0766 0.321 CD4_TCM L2
ENSG00000134644 PUM1 -280114 sc-eQTL 8.92e-01 -0.0093 0.0681 0.321 CD4_TCM L2
ENSG00000162511 LAPTM5 28103 sc-eQTL 2.36e-01 -0.0669 0.0563 0.321 CD4_TCM L2
ENSG00000162517 PEF1 -859019 sc-eQTL 1.21e-02 -0.189 0.0746 0.321 CD4_TCM L2
ENSG00000186056 MATN1-AS1 67373 sc-eQTL 2.42e-01 -0.0839 0.0715 0.321 CD4_TCM L2
ENSG00000287510 AL137857.1 54184 sc-eQTL 1.21e-01 0.124 0.0794 0.321 CD4_TCM L2
ENSG00000060688 SNRNP40 -510911 sc-eQTL 5.14e-01 0.0622 0.0952 0.321 CD4_TEM L2
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 9.23e-01 0.00884 0.0908 0.321 CD4_TEM L2
ENSG00000134644 PUM1 -280114 sc-eQTL 2.01e-01 -0.0966 0.0753 0.321 CD4_TEM L2
ENSG00000162511 LAPTM5 28103 sc-eQTL 3.23e-01 0.0756 0.0763 0.321 CD4_TEM L2
ENSG00000162517 PEF1 -859019 sc-eQTL 1.70e-02 -0.203 0.0845 0.321 CD4_TEM L2
ENSG00000186056 MATN1-AS1 67373 sc-eQTL 2.38e-02 -0.201 0.0884 0.321 CD4_TEM L2
ENSG00000287510 AL137857.1 54184 sc-eQTL 5.47e-01 -0.0532 0.0881 0.321 CD4_TEM L2
ENSG00000060688 SNRNP40 -510911 sc-eQTL 6.36e-01 -0.0499 0.105 0.321 CD8_CTL L2
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 7.33e-02 -0.144 0.0801 0.321 CD8_CTL L2
ENSG00000134644 PUM1 -280114 sc-eQTL 3.51e-01 -0.0731 0.0783 0.321 CD8_CTL L2
ENSG00000162511 LAPTM5 28103 sc-eQTL 1.71e-01 0.119 0.0865 0.321 CD8_CTL L2
ENSG00000162517 PEF1 -859019 sc-eQTL 8.34e-01 0.0158 0.0756 0.321 CD8_CTL L2
ENSG00000186056 MATN1-AS1 67373 sc-eQTL 4.88e-01 0.0634 0.0912 0.321 CD8_CTL L2
ENSG00000287510 AL137857.1 54184 sc-eQTL 6.19e-01 0.0427 0.0858 0.321 CD8_CTL L2
ENSG00000060688 SNRNP40 -510911 sc-eQTL 9.87e-01 -0.0016 0.0956 0.321 CD8_Naive L2
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 8.51e-01 -0.0155 0.0824 0.321 CD8_Naive L2
ENSG00000134644 PUM1 -280114 sc-eQTL 7.93e-01 -0.0174 0.0663 0.321 CD8_Naive L2
ENSG00000162511 LAPTM5 28103 sc-eQTL 1.54e-01 -0.0905 0.0632 0.321 CD8_Naive L2
ENSG00000162517 PEF1 -859019 sc-eQTL 8.69e-01 0.0146 0.0883 0.321 CD8_Naive L2
ENSG00000186056 MATN1-AS1 67373 sc-eQTL 3.60e-01 0.0726 0.0792 0.321 CD8_Naive L2
ENSG00000287510 AL137857.1 54184 sc-eQTL 7.93e-01 -0.0227 0.0864 0.321 CD8_Naive L2
ENSG00000060688 SNRNP40 -510911 sc-eQTL 9.30e-01 -0.00939 0.107 0.312 CD8_TCM L2
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 8.38e-02 -0.17 0.0975 0.312 CD8_TCM L2
ENSG00000134644 PUM1 -280114 sc-eQTL 9.07e-01 -0.0108 0.0924 0.312 CD8_TCM L2
ENSG00000162511 LAPTM5 28103 sc-eQTL 6.55e-01 -0.0433 0.0967 0.312 CD8_TCM L2
ENSG00000162517 PEF1 -859019 sc-eQTL 4.27e-01 0.0785 0.0987 0.312 CD8_TCM L2
ENSG00000186056 MATN1-AS1 67373 sc-eQTL 4.19e-01 -0.0724 0.0894 0.312 CD8_TCM L2
ENSG00000287510 AL137857.1 54184 sc-eQTL 2.17e-01 0.112 0.0901 0.312 CD8_TCM L2
ENSG00000060688 SNRNP40 -510911 sc-eQTL 2.37e-01 -0.119 0.1 0.329 CD8_TEM L2
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 5.11e-01 -0.0633 0.0961 0.329 CD8_TEM L2
ENSG00000134644 PUM1 -280114 sc-eQTL 1.84e-01 0.13 0.098 0.329 CD8_TEM L2
ENSG00000162511 LAPTM5 28103 sc-eQTL 8.67e-02 -0.158 0.0918 0.329 CD8_TEM L2
ENSG00000162517 PEF1 -859019 sc-eQTL 2.61e-01 -0.098 0.0868 0.329 CD8_TEM L2
ENSG00000186056 MATN1-AS1 67373 sc-eQTL 9.58e-01 -0.00508 0.096 0.329 CD8_TEM L2
ENSG00000287510 AL137857.1 54184 sc-eQTL 3.75e-01 0.0771 0.0867 0.329 CD8_TEM L2
ENSG00000060688 SNRNP40 -510911 sc-eQTL 3.47e-01 0.0955 0.101 0.323 MAIT L2
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 6.56e-01 -0.0401 0.0899 0.323 MAIT L2
ENSG00000134644 PUM1 -280114 sc-eQTL 4.29e-01 0.0683 0.0861 0.323 MAIT L2
ENSG00000162511 LAPTM5 28103 sc-eQTL 1.91e-01 -0.106 0.081 0.323 MAIT L2
ENSG00000162517 PEF1 -859019 sc-eQTL 9.43e-01 -0.0064 0.0894 0.323 MAIT L2
ENSG00000186056 MATN1-AS1 67373 sc-eQTL 6.62e-01 0.0397 0.0906 0.323 MAIT L2
ENSG00000287510 AL137857.1 54184 sc-eQTL 7.70e-01 0.0274 0.0934 0.323 MAIT L2
ENSG00000060688 SNRNP40 -510911 sc-eQTL 3.04e-01 -0.107 0.104 0.32 NK_CD56bright L2
ENSG00000121753 ADGRB2 -979016 sc-eQTL 5.51e-01 -0.0486 0.0813 0.32 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 9.16e-02 0.148 0.0872 0.32 NK_CD56bright L2
ENSG00000134644 PUM1 -280114 sc-eQTL 3.22e-01 -0.0913 0.092 0.32 NK_CD56bright L2
ENSG00000162511 LAPTM5 28103 sc-eQTL 5.30e-01 -0.0572 0.0909 0.32 NK_CD56bright L2
ENSG00000162517 PEF1 -859019 sc-eQTL 5.11e-01 -0.0581 0.0883 0.32 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 67373 sc-eQTL 3.58e-02 -0.191 0.0905 0.32 NK_CD56bright L2
ENSG00000287510 AL137857.1 54184 sc-eQTL 3.07e-01 -0.092 0.0899 0.32 NK_CD56bright L2
ENSG00000060688 SNRNP40 -510911 sc-eQTL 3.02e-01 -0.102 0.0988 0.319 NK_CD56dim L2
ENSG00000121753 ADGRB2 -979016 sc-eQTL 2.75e-01 0.0951 0.0869 0.319 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 7.98e-01 -0.0188 0.0733 0.319 NK_CD56dim L2
ENSG00000134644 PUM1 -280114 sc-eQTL 6.69e-01 -0.0321 0.0751 0.319 NK_CD56dim L2
ENSG00000162511 LAPTM5 28103 sc-eQTL 1.35e-01 0.12 0.0797 0.319 NK_CD56dim L2
ENSG00000162517 PEF1 -859019 sc-eQTL 5.71e-01 -0.0405 0.0713 0.319 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 67373 sc-eQTL 7.64e-01 -0.0302 0.1 0.319 NK_CD56dim L2
ENSG00000287510 AL137857.1 54184 sc-eQTL 6.08e-01 -0.0425 0.0828 0.319 NK_CD56dim L2
ENSG00000060688 SNRNP40 -510911 sc-eQTL 7.69e-01 -0.0311 0.106 0.326 NK_HLA L2
ENSG00000121753 ADGRB2 -979016 sc-eQTL 5.29e-01 0.053 0.0842 0.326 NK_HLA L2
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 7.95e-01 -0.0247 0.0947 0.326 NK_HLA L2
ENSG00000134644 PUM1 -280114 sc-eQTL 9.44e-01 -0.00652 0.0923 0.326 NK_HLA L2
ENSG00000162511 LAPTM5 28103 sc-eQTL 5.73e-01 0.0497 0.088 0.326 NK_HLA L2
ENSG00000162517 PEF1 -859019 sc-eQTL 4.97e-02 -0.194 0.0983 0.326 NK_HLA L2
ENSG00000186056 MATN1-AS1 67373 sc-eQTL 3.43e-01 0.0888 0.0935 0.326 NK_HLA L2
ENSG00000287510 AL137857.1 54184 sc-eQTL 8.48e-01 0.0174 0.0906 0.326 NK_HLA L2
ENSG00000060688 SNRNP40 -510911 sc-eQTL 6.97e-01 -0.0376 0.0964 0.319 NK_cytokine L2
ENSG00000121753 ADGRB2 -979016 sc-eQTL 8.28e-01 0.019 0.0871 0.319 NK_cytokine L2
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 6.87e-01 -0.0303 0.0752 0.319 NK_cytokine L2
ENSG00000134644 PUM1 -280114 sc-eQTL 5.32e-01 0.0508 0.0813 0.319 NK_cytokine L2
ENSG00000162511 LAPTM5 28103 sc-eQTL 2.37e-01 0.106 0.0893 0.319 NK_cytokine L2
ENSG00000162517 PEF1 -859019 sc-eQTL 2.48e-01 -0.0882 0.0761 0.319 NK_cytokine L2
ENSG00000186056 MATN1-AS1 67373 sc-eQTL 8.00e-01 -0.024 0.0949 0.319 NK_cytokine L2
ENSG00000287510 AL137857.1 54184 sc-eQTL 3.04e-01 -0.0909 0.0881 0.319 NK_cytokine L2
ENSG00000060688 SNRNP40 -510911 sc-eQTL 5.47e-01 -0.0689 0.114 0.341 PB L2
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 3.86e-01 0.115 0.132 0.341 PB L2
ENSG00000134644 PUM1 -280114 sc-eQTL 5.76e-01 -0.0643 0.115 0.341 PB L2
ENSG00000162510 MATN1 62292 sc-eQTL 8.79e-01 -0.0164 0.107 0.341 PB L2
ENSG00000162511 LAPTM5 28103 sc-eQTL 7.92e-01 0.0202 0.0765 0.341 PB L2
ENSG00000162517 PEF1 -859019 sc-eQTL 4.41e-01 -0.091 0.118 0.341 PB L2
ENSG00000186056 MATN1-AS1 67373 sc-eQTL 3.09e-01 0.106 0.104 0.341 PB L2
ENSG00000287510 AL137857.1 54184 sc-eQTL 1.59e-01 0.157 0.111 0.341 PB L2
ENSG00000060688 SNRNP40 -510911 sc-eQTL 7.95e-01 0.0197 0.0759 0.315 Pro_T L2
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 5.09e-05 0.383 0.0926 0.315 Pro_T L2
ENSG00000134644 PUM1 -280114 sc-eQTL 1.68e-01 0.124 0.0895 0.315 Pro_T L2
ENSG00000162511 LAPTM5 28103 sc-eQTL 7.12e-01 -0.0238 0.0645 0.315 Pro_T L2
ENSG00000162517 PEF1 -859019 sc-eQTL 2.42e-01 -0.111 0.0943 0.315 Pro_T L2
ENSG00000186056 MATN1-AS1 67373 sc-eQTL 4.24e-01 -0.0721 0.09 0.315 Pro_T L2
ENSG00000287510 AL137857.1 54184 sc-eQTL 8.36e-01 0.0172 0.0829 0.315 Pro_T L2
ENSG00000060688 SNRNP40 -510911 sc-eQTL 3.07e-01 -0.1 0.0977 0.321 Treg L2
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 1.02e-01 -0.155 0.0942 0.321 Treg L2
ENSG00000134644 PUM1 -280114 sc-eQTL 3.42e-01 -0.0721 0.0757 0.321 Treg L2
ENSG00000162511 LAPTM5 28103 sc-eQTL 4.21e-02 -0.176 0.086 0.321 Treg L2
ENSG00000162517 PEF1 -859019 sc-eQTL 8.47e-01 -0.0182 0.0938 0.321 Treg L2
ENSG00000186056 MATN1-AS1 67373 sc-eQTL 9.65e-01 0.00391 0.0885 0.321 Treg L2
ENSG00000287510 AL137857.1 54184 sc-eQTL 2.37e-01 0.105 0.0881 0.321 Treg L2
ENSG00000060688 SNRNP40 -510911 sc-eQTL 6.03e-01 -0.052 0.1 0.312 cDC L2
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 1.78e-01 -0.146 0.108 0.312 cDC L2
ENSG00000134644 PUM1 -280114 sc-eQTL 3.94e-02 -0.191 0.092 0.312 cDC L2
ENSG00000162511 LAPTM5 28103 sc-eQTL 3.88e-01 0.0563 0.0651 0.312 cDC L2
ENSG00000162517 PEF1 -859019 sc-eQTL 7.59e-01 0.029 0.0944 0.312 cDC L2
ENSG00000168528 SERINC2 -623688 sc-eQTL 4.50e-01 0.0633 0.0836 0.312 cDC L2
ENSG00000284543 LINC01226 -720349 sc-eQTL 7.79e-01 0.0231 0.0823 0.312 cDC L2
ENSG00000287510 AL137857.1 54184 sc-eQTL 4.88e-01 0.0615 0.0885 0.312 cDC L2
ENSG00000060688 SNRNP40 -510911 sc-eQTL 5.18e-02 -0.155 0.0794 0.321 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 7.29e-01 0.031 0.0893 0.321 cMono_IL1B L2
ENSG00000134644 PUM1 -280114 sc-eQTL 7.02e-01 0.0231 0.0605 0.321 cMono_IL1B L2
ENSG00000162511 LAPTM5 28103 sc-eQTL 1.47e-01 0.0769 0.0528 0.321 cMono_IL1B L2
ENSG00000162512 SDC3 -122881 sc-eQTL 6.90e-01 0.0399 0.1 0.321 cMono_IL1B L2
ENSG00000162517 PEF1 -859019 sc-eQTL 9.08e-02 -0.138 0.0811 0.321 cMono_IL1B L2
ENSG00000168528 SERINC2 -623688 sc-eQTL 6.72e-01 -0.0429 0.101 0.321 cMono_IL1B L2
ENSG00000284543 LINC01226 -720349 sc-eQTL 1.62e-01 -0.125 0.0891 0.321 cMono_IL1B L2
ENSG00000287510 AL137857.1 54184 sc-eQTL 3.22e-01 0.0827 0.0833 0.321 cMono_IL1B L2
ENSG00000060688 SNRNP40 -510911 sc-eQTL 8.70e-01 -0.0136 0.083 0.321 cMono_S100A L2
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 8.41e-01 -0.0197 0.0981 0.321 cMono_S100A L2
ENSG00000134644 PUM1 -280114 sc-eQTL 2.88e-01 -0.0754 0.0707 0.321 cMono_S100A L2
ENSG00000162511 LAPTM5 28103 sc-eQTL 8.58e-02 0.0934 0.0541 0.321 cMono_S100A L2
ENSG00000162512 SDC3 -122881 sc-eQTL 9.36e-01 0.00752 0.0942 0.321 cMono_S100A L2
ENSG00000162517 PEF1 -859019 sc-eQTL 3.33e-01 -0.0823 0.0848 0.321 cMono_S100A L2
ENSG00000168528 SERINC2 -623688 sc-eQTL 8.29e-01 -0.0216 0.0997 0.321 cMono_S100A L2
ENSG00000284543 LINC01226 -720349 sc-eQTL 4.87e-01 0.0564 0.0809 0.321 cMono_S100A L2
ENSG00000287510 AL137857.1 54184 sc-eQTL 8.63e-01 -0.0141 0.0813 0.321 cMono_S100A L2
ENSG00000060688 SNRNP40 -510911 sc-eQTL 7.30e-01 0.0421 0.122 0.324 gdT L2
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 6.66e-01 -0.0454 0.105 0.324 gdT L2
ENSG00000134644 PUM1 -280114 sc-eQTL 9.47e-01 -0.00718 0.108 0.324 gdT L2
ENSG00000162511 LAPTM5 28103 sc-eQTL 3.33e-01 -0.114 0.117 0.324 gdT L2
ENSG00000162517 PEF1 -859019 sc-eQTL 8.98e-01 -0.0138 0.108 0.324 gdT L2
ENSG00000186056 MATN1-AS1 67373 sc-eQTL 9.08e-01 0.0126 0.108 0.324 gdT L2
ENSG00000287510 AL137857.1 54184 sc-eQTL 1.61e-01 -0.147 0.104 0.324 gdT L2
ENSG00000060688 SNRNP40 -510911 sc-eQTL 2.07e-01 -0.12 0.095 0.327 intMono L2
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 1.24e-01 0.157 0.102 0.327 intMono L2
ENSG00000134644 PUM1 -280114 sc-eQTL 9.90e-01 -0.00106 0.087 0.327 intMono L2
ENSG00000162511 LAPTM5 28103 sc-eQTL 8.48e-03 0.178 0.0671 0.327 intMono L2
ENSG00000162512 SDC3 -122881 sc-eQTL 1.41e-01 0.137 0.0929 0.327 intMono L2
ENSG00000162517 PEF1 -859019 sc-eQTL 5.79e-01 -0.0545 0.0981 0.327 intMono L2
ENSG00000168528 SERINC2 -623688 sc-eQTL 3.63e-01 0.089 0.0976 0.327 intMono L2
ENSG00000284543 LINC01226 -720349 sc-eQTL 1.38e-01 -0.137 0.0922 0.327 intMono L2
ENSG00000287510 AL137857.1 54184 sc-eQTL 2.02e-01 0.118 0.0923 0.327 intMono L2
ENSG00000060688 SNRNP40 -510911 sc-eQTL 6.69e-01 0.038 0.0888 0.326 ncMono L2
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 8.29e-01 -0.0205 0.0947 0.326 ncMono L2
ENSG00000134644 PUM1 -280114 sc-eQTL 1.00e+00 2.99e-05 0.0774 0.326 ncMono L2
ENSG00000162511 LAPTM5 28103 sc-eQTL 4.91e-01 0.0484 0.0702 0.326 ncMono L2
ENSG00000162512 SDC3 -122881 sc-eQTL 5.93e-01 0.0421 0.0787 0.326 ncMono L2
ENSG00000162517 PEF1 -859019 sc-eQTL 3.36e-01 -0.0869 0.0901 0.326 ncMono L2
ENSG00000168528 SERINC2 -623688 sc-eQTL 6.80e-01 0.0355 0.0859 0.326 ncMono L2
ENSG00000284543 LINC01226 -720349 sc-eQTL 3.20e-01 0.0854 0.0857 0.326 ncMono L2
ENSG00000287510 AL137857.1 54184 sc-eQTL 9.71e-02 0.147 0.0884 0.326 ncMono L2
ENSG00000060688 SNRNP40 -510911 sc-eQTL 4.71e-01 -0.0733 0.101 0.308 pDC L2
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 7.32e-02 -0.199 0.11 0.308 pDC L2
ENSG00000134644 PUM1 -280114 sc-eQTL 6.16e-01 0.0464 0.0923 0.308 pDC L2
ENSG00000162511 LAPTM5 28103 sc-eQTL 1.93e-01 0.112 0.0855 0.308 pDC L2
ENSG00000162517 PEF1 -859019 sc-eQTL 7.02e-01 0.0427 0.111 0.308 pDC L2
ENSG00000168528 SERINC2 -623688 sc-eQTL 7.48e-01 0.0335 0.104 0.308 pDC L2
ENSG00000284543 LINC01226 -720349 sc-eQTL 7.34e-01 0.0275 0.0809 0.308 pDC L2
ENSG00000287510 AL137857.1 54184 sc-eQTL 9.90e-01 -0.00119 0.0952 0.308 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -510911 sc-eQTL 8.11e-01 0.0234 0.098 0.321 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 6.68e-01 -0.035 0.0815 0.321 B_Memory LOneK1K
ENSG00000134644 PUM1 -280114 sc-eQTL 3.58e-01 -0.0664 0.0721 0.321 B_Memory LOneK1K
ENSG00000162510 MATN1 62292 sc-eQTL 4.61e-01 -0.0608 0.0823 0.321 B_Memory LOneK1K
ENSG00000162511 LAPTM5 28103 sc-eQTL 6.60e-01 0.0228 0.0517 0.321 B_Memory LOneK1K
ENSG00000162517 PEF1 -859019 sc-eQTL 7.13e-01 -0.0316 0.0857 0.321 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 67373 sc-eQTL 6.10e-01 -0.0349 0.0684 0.321 B_Memory LOneK1K
ENSG00000287510 AL137857.1 54184 sc-eQTL 7.49e-01 -0.0239 0.0746 0.321 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -510911 sc-eQTL 1.74e-01 0.123 0.0902 0.321 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 7.26e-01 0.0251 0.0716 0.321 B_Naive LOneK1K
ENSG00000134644 PUM1 -280114 sc-eQTL 1.23e-01 0.104 0.0674 0.321 B_Naive LOneK1K
ENSG00000162510 MATN1 62292 sc-eQTL 9.73e-01 -0.00221 0.0652 0.321 B_Naive LOneK1K
ENSG00000162511 LAPTM5 28103 sc-eQTL 7.13e-02 0.0826 0.0456 0.321 B_Naive LOneK1K
ENSG00000162517 PEF1 -859019 sc-eQTL 8.46e-01 -0.0163 0.0838 0.321 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 67373 sc-eQTL 4.22e-01 0.0476 0.0592 0.321 B_Naive LOneK1K
ENSG00000287510 AL137857.1 54184 sc-eQTL 6.22e-01 0.0348 0.0704 0.321 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -510911 sc-eQTL 3.67e-02 -0.158 0.0749 0.321 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 8.06e-01 -0.0211 0.0857 0.321 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -280114 sc-eQTL 8.79e-01 0.00833 0.0547 0.321 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 28103 sc-eQTL 1.08e-01 0.077 0.0478 0.321 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -122881 sc-eQTL 7.29e-01 0.034 0.098 0.321 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -859019 sc-eQTL 5.61e-02 -0.131 0.0683 0.321 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -623688 sc-eQTL 8.46e-01 -0.0196 0.101 0.321 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -720349 sc-eQTL 3.46e-01 -0.0779 0.0825 0.321 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 54184 sc-eQTL 3.18e-01 0.0773 0.0772 0.321 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -510911 sc-eQTL 6.26e-01 -0.0411 0.0842 0.321 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 2.48e-01 0.106 0.0919 0.321 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -280114 sc-eQTL 8.62e-01 -0.0131 0.0756 0.321 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 28103 sc-eQTL 9.52e-02 0.101 0.06 0.321 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -122881 sc-eQTL 2.78e-01 0.0958 0.088 0.321 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -859019 sc-eQTL 4.16e-01 -0.0652 0.0801 0.321 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -623688 sc-eQTL 5.36e-01 0.0567 0.0915 0.321 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -720349 sc-eQTL 4.93e-01 -0.0597 0.0868 0.321 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 54184 sc-eQTL 6.97e-02 0.157 0.0863 0.321 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -510911 sc-eQTL 3.60e-01 -0.0854 0.0931 0.319 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -979016 sc-eQTL 3.01e-01 0.0822 0.0793 0.319 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -511105 sc-eQTL 4.51e-01 -0.0481 0.0637 0.319 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -280114 sc-eQTL 7.13e-01 0.0257 0.0698 0.319 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 28103 sc-eQTL 9.54e-02 0.13 0.0775 0.319 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -859019 sc-eQTL 2.74e-01 -0.0648 0.0591 0.319 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 67373 sc-eQTL 5.77e-01 0.0502 0.09 0.319 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 54184 sc-eQTL 9.82e-01 0.0018 0.0777 0.319 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000121766 ZCCHC17 -511105 eQTL 1.12e-02 0.0503 0.0198 0.0 0.0 0.309
ENSG00000186056 MATN1-AS1 67373 eQTL 1.12e-02 0.0357 0.014 0.00177 0.0 0.309

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000186056 MATN1-AS1 67373 7.83e-06 8.42e-06 9.72e-07 3.87e-06 1.47e-06 3.41e-06 9.34e-06 1.18e-06 5.25e-06 3.5e-06 8.9e-06 3.63e-06 1.09e-05 3.17e-06 1.55e-06 4.63e-06 3.61e-06 3.77e-06 1.92e-06 1.76e-06 2.8e-06 7.41e-06 5.31e-06 2.01e-06 9.63e-06 2.26e-06 3.61e-06 2.1e-06 6.94e-06 7.59e-06 3.95e-06 4.86e-07 7.8e-07 2.53e-06 2.4e-06 1.39e-06 1.03e-06 6.18e-07 1.41e-06 7.73e-07 6.93e-07 8.25e-06 8.57e-07 1.55e-07 7.55e-07 9.68e-07 1.05e-06 7.24e-07 5.96e-07