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Genes within 1Mb (chr1:30785412:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -511376 sc-eQTL 3.02e-01 0.0855 0.0827 0.325 B L1
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 9.40e-01 -0.00498 0.0664 0.325 B L1
ENSG00000134644 PUM1 -280579 sc-eQTL 6.89e-01 0.0223 0.0557 0.325 B L1
ENSG00000162510 MATN1 61827 sc-eQTL 7.73e-01 -0.0169 0.0586 0.325 B L1
ENSG00000162511 LAPTM5 27638 sc-eQTL 9.27e-02 0.077 0.0456 0.325 B L1
ENSG00000162517 PEF1 -859484 sc-eQTL 3.44e-01 -0.0656 0.0691 0.325 B L1
ENSG00000186056 MATN1-AS1 66908 sc-eQTL 4.21e-01 0.0432 0.0537 0.325 B L1
ENSG00000287510 AL137857.1 53719 sc-eQTL 6.61e-01 0.0279 0.0636 0.325 B L1
ENSG00000060688 SNRNP40 -511376 sc-eQTL 4.56e-01 0.0539 0.0721 0.325 CD4T L1
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 9.55e-01 0.0032 0.0564 0.325 CD4T L1
ENSG00000134644 PUM1 -280579 sc-eQTL 3.12e-01 -0.0508 0.0501 0.325 CD4T L1
ENSG00000162511 LAPTM5 27638 sc-eQTL 6.25e-02 -0.103 0.0552 0.325 CD4T L1
ENSG00000162517 PEF1 -859484 sc-eQTL 1.27e-01 -0.0887 0.0579 0.325 CD4T L1
ENSG00000186056 MATN1-AS1 66908 sc-eQTL 4.86e-01 -0.0347 0.0498 0.325 CD4T L1
ENSG00000287510 AL137857.1 53719 sc-eQTL 1.38e-01 0.0884 0.0594 0.325 CD4T L1
ENSG00000060688 SNRNP40 -511376 sc-eQTL 5.33e-01 -0.059 0.0944 0.325 CD8T L1
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 3.07e-01 -0.0642 0.0627 0.325 CD8T L1
ENSG00000134644 PUM1 -280579 sc-eQTL 3.25e-01 -0.0545 0.0552 0.325 CD8T L1
ENSG00000162511 LAPTM5 27638 sc-eQTL 4.77e-01 0.0382 0.0537 0.325 CD8T L1
ENSG00000162517 PEF1 -859484 sc-eQTL 9.22e-01 -0.00646 0.0662 0.325 CD8T L1
ENSG00000186056 MATN1-AS1 66908 sc-eQTL 2.43e-01 0.0735 0.0628 0.325 CD8T L1
ENSG00000287510 AL137857.1 53719 sc-eQTL 2.63e-01 0.0887 0.0789 0.325 CD8T L1
ENSG00000060688 SNRNP40 -511376 sc-eQTL 6.75e-01 -0.0357 0.0849 0.322 DC L1
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 7.61e-03 -0.266 0.0988 0.322 DC L1
ENSG00000134644 PUM1 -280579 sc-eQTL 2.26e-01 -0.0954 0.0785 0.322 DC L1
ENSG00000162511 LAPTM5 27638 sc-eQTL 2.19e-01 0.0691 0.0561 0.322 DC L1
ENSG00000162517 PEF1 -859484 sc-eQTL 8.02e-01 0.0229 0.0912 0.322 DC L1
ENSG00000168528 SERINC2 -624153 sc-eQTL 3.15e-01 0.0932 0.0926 0.322 DC L1
ENSG00000284543 LINC01226 -720814 sc-eQTL 4.78e-01 0.0437 0.0614 0.322 DC L1
ENSG00000287510 AL137857.1 53719 sc-eQTL 2.24e-01 0.108 0.0887 0.322 DC L1
ENSG00000060688 SNRNP40 -511376 sc-eQTL 7.80e-02 -0.115 0.0647 0.325 Mono L1
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 9.22e-01 -0.00791 0.0808 0.325 Mono L1
ENSG00000134644 PUM1 -280579 sc-eQTL 9.59e-01 -0.00268 0.0518 0.325 Mono L1
ENSG00000162511 LAPTM5 27638 sc-eQTL 1.66e-01 0.066 0.0474 0.325 Mono L1
ENSG00000162512 SDC3 -123346 sc-eQTL 2.32e-01 0.109 0.0913 0.325 Mono L1
ENSG00000162517 PEF1 -859484 sc-eQTL 1.28e-02 -0.159 0.0633 0.325 Mono L1
ENSG00000168528 SERINC2 -624153 sc-eQTL 8.70e-01 -0.0161 0.0983 0.325 Mono L1
ENSG00000284543 LINC01226 -720814 sc-eQTL 2.94e-01 -0.0908 0.0863 0.325 Mono L1
ENSG00000287510 AL137857.1 53719 sc-eQTL 2.61e-01 0.085 0.0754 0.325 Mono L1
ENSG00000060688 SNRNP40 -511376 sc-eQTL 2.64e-01 -0.102 0.0907 0.326 NK L1
ENSG00000121753 ADGRB2 -979481 sc-eQTL 2.39e-01 0.0921 0.0781 0.326 NK L1
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 6.67e-01 -0.0268 0.0622 0.326 NK L1
ENSG00000134644 PUM1 -280579 sc-eQTL 8.11e-01 0.0156 0.0653 0.326 NK L1
ENSG00000162511 LAPTM5 27638 sc-eQTL 1.64e-01 0.104 0.0748 0.326 NK L1
ENSG00000162517 PEF1 -859484 sc-eQTL 2.33e-01 -0.0654 0.0547 0.326 NK L1
ENSG00000186056 MATN1-AS1 66908 sc-eQTL 9.51e-01 0.00516 0.0845 0.326 NK L1
ENSG00000287510 AL137857.1 53719 sc-eQTL 9.30e-01 0.00682 0.078 0.326 NK L1
ENSG00000060688 SNRNP40 -511376 sc-eQTL 1.13e-01 0.109 0.0684 0.325 Other_T L1
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 1.49e-01 0.106 0.0731 0.325 Other_T L1
ENSG00000134644 PUM1 -280579 sc-eQTL 1.14e-01 0.104 0.0657 0.325 Other_T L1
ENSG00000162511 LAPTM5 27638 sc-eQTL 5.86e-01 -0.0296 0.0541 0.325 Other_T L1
ENSG00000162517 PEF1 -859484 sc-eQTL 8.91e-01 -0.00995 0.0723 0.325 Other_T L1
ENSG00000186056 MATN1-AS1 66908 sc-eQTL 9.65e-01 0.00391 0.0887 0.325 Other_T L1
ENSG00000287510 AL137857.1 53719 sc-eQTL 5.06e-01 -0.0615 0.0923 0.325 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -511376 sc-eQTL 5.54e-01 -0.0656 0.111 0.311 B_Activated L2
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 4.79e-01 -0.0791 0.112 0.311 B_Activated L2
ENSG00000134644 PUM1 -280579 sc-eQTL 5.85e-01 0.0568 0.104 0.311 B_Activated L2
ENSG00000162510 MATN1 61827 sc-eQTL 9.92e-01 -0.000949 0.0907 0.311 B_Activated L2
ENSG00000162511 LAPTM5 27638 sc-eQTL 6.83e-01 0.0259 0.0632 0.311 B_Activated L2
ENSG00000162517 PEF1 -859484 sc-eQTL 9.84e-01 -0.00212 0.108 0.311 B_Activated L2
ENSG00000186056 MATN1-AS1 66908 sc-eQTL 4.02e-01 -0.0857 0.102 0.311 B_Activated L2
ENSG00000287510 AL137857.1 53719 sc-eQTL 3.96e-01 0.0768 0.0902 0.311 B_Activated L2
ENSG00000060688 SNRNP40 -511376 sc-eQTL 8.65e-01 0.0173 0.102 0.324 B_Intermediate L2
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 3.88e-01 -0.0733 0.0848 0.324 B_Intermediate L2
ENSG00000134644 PUM1 -280579 sc-eQTL 4.99e-01 -0.0542 0.08 0.324 B_Intermediate L2
ENSG00000162510 MATN1 61827 sc-eQTL 9.75e-01 0.00261 0.0834 0.324 B_Intermediate L2
ENSG00000162511 LAPTM5 27638 sc-eQTL 8.73e-01 0.0082 0.0512 0.324 B_Intermediate L2
ENSG00000162517 PEF1 -859484 sc-eQTL 9.78e-01 0.00264 0.095 0.324 B_Intermediate L2
ENSG00000186056 MATN1-AS1 66908 sc-eQTL 1.73e-01 -0.0977 0.0715 0.324 B_Intermediate L2
ENSG00000287510 AL137857.1 53719 sc-eQTL 8.74e-01 -0.0128 0.0804 0.324 B_Intermediate L2
ENSG00000060688 SNRNP40 -511376 sc-eQTL 4.80e-01 0.0696 0.0983 0.323 B_Memory L2
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 9.50e-01 0.00567 0.0907 0.323 B_Memory L2
ENSG00000134644 PUM1 -280579 sc-eQTL 7.86e-01 0.0214 0.0789 0.323 B_Memory L2
ENSG00000162510 MATN1 61827 sc-eQTL 1.08e-01 -0.121 0.075 0.323 B_Memory L2
ENSG00000162511 LAPTM5 27638 sc-eQTL 5.70e-02 0.127 0.0663 0.323 B_Memory L2
ENSG00000162517 PEF1 -859484 sc-eQTL 4.56e-01 -0.0666 0.0892 0.323 B_Memory L2
ENSG00000186056 MATN1-AS1 66908 sc-eQTL 1.40e-02 0.187 0.0755 0.323 B_Memory L2
ENSG00000287510 AL137857.1 53719 sc-eQTL 4.59e-01 -0.0665 0.0896 0.323 B_Memory L2
ENSG00000060688 SNRNP40 -511376 sc-eQTL 9.24e-01 0.00866 0.0906 0.325 B_Naive1 L2
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 6.62e-01 0.0342 0.0782 0.325 B_Naive1 L2
ENSG00000134644 PUM1 -280579 sc-eQTL 2.28e-01 0.0832 0.0688 0.325 B_Naive1 L2
ENSG00000162510 MATN1 61827 sc-eQTL 4.94e-01 -0.0479 0.0699 0.325 B_Naive1 L2
ENSG00000162511 LAPTM5 27638 sc-eQTL 1.12e-01 0.0742 0.0465 0.325 B_Naive1 L2
ENSG00000162517 PEF1 -859484 sc-eQTL 1.33e-01 -0.124 0.082 0.325 B_Naive1 L2
ENSG00000186056 MATN1-AS1 66908 sc-eQTL 7.04e-01 0.0234 0.0614 0.325 B_Naive1 L2
ENSG00000287510 AL137857.1 53719 sc-eQTL 2.57e-01 0.086 0.0756 0.325 B_Naive1 L2
ENSG00000060688 SNRNP40 -511376 sc-eQTL 1.11e-01 0.155 0.0968 0.324 B_Naive2 L2
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 7.13e-01 -0.0296 0.0803 0.324 B_Naive2 L2
ENSG00000134644 PUM1 -280579 sc-eQTL 7.48e-01 0.0253 0.0786 0.324 B_Naive2 L2
ENSG00000162510 MATN1 61827 sc-eQTL 5.27e-01 0.0478 0.0754 0.324 B_Naive2 L2
ENSG00000162511 LAPTM5 27638 sc-eQTL 6.47e-02 0.0945 0.0509 0.324 B_Naive2 L2
ENSG00000162517 PEF1 -859484 sc-eQTL 1.28e-01 0.142 0.0928 0.324 B_Naive2 L2
ENSG00000186056 MATN1-AS1 66908 sc-eQTL 3.83e-01 0.0652 0.0745 0.324 B_Naive2 L2
ENSG00000287510 AL137857.1 53719 sc-eQTL 7.51e-01 0.0257 0.0806 0.324 B_Naive2 L2
ENSG00000060688 SNRNP40 -511376 sc-eQTL 6.85e-01 -0.0393 0.0966 0.32 CD4_CTL L2
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 1.64e-01 -0.132 0.0946 0.32 CD4_CTL L2
ENSG00000134644 PUM1 -280579 sc-eQTL 2.47e-01 -0.108 0.0929 0.32 CD4_CTL L2
ENSG00000162511 LAPTM5 27638 sc-eQTL 6.95e-01 -0.0326 0.0831 0.32 CD4_CTL L2
ENSG00000162517 PEF1 -859484 sc-eQTL 9.34e-01 0.00709 0.0852 0.32 CD4_CTL L2
ENSG00000186056 MATN1-AS1 66908 sc-eQTL 2.75e-01 0.0992 0.0906 0.32 CD4_CTL L2
ENSG00000287510 AL137857.1 53719 sc-eQTL 1.45e-01 -0.117 0.0798 0.32 CD4_CTL L2
ENSG00000060688 SNRNP40 -511376 sc-eQTL 2.14e-01 0.0941 0.0755 0.325 CD4_Naive L2
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 6.55e-01 -0.03 0.0672 0.325 CD4_Naive L2
ENSG00000134644 PUM1 -280579 sc-eQTL 6.37e-01 -0.0253 0.0536 0.325 CD4_Naive L2
ENSG00000162511 LAPTM5 27638 sc-eQTL 3.49e-02 -0.121 0.0569 0.325 CD4_Naive L2
ENSG00000162517 PEF1 -859484 sc-eQTL 7.88e-01 -0.017 0.063 0.325 CD4_Naive L2
ENSG00000186056 MATN1-AS1 66908 sc-eQTL 8.12e-01 0.0139 0.0583 0.325 CD4_Naive L2
ENSG00000287510 AL137857.1 53719 sc-eQTL 4.84e-01 0.0469 0.0669 0.325 CD4_Naive L2
ENSG00000060688 SNRNP40 -511376 sc-eQTL 8.04e-01 -0.0232 0.0935 0.325 CD4_TCM L2
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 1.85e-01 0.1 0.0751 0.325 CD4_TCM L2
ENSG00000134644 PUM1 -280579 sc-eQTL 8.98e-01 -0.00855 0.0668 0.325 CD4_TCM L2
ENSG00000162511 LAPTM5 27638 sc-eQTL 2.13e-01 -0.069 0.0552 0.325 CD4_TCM L2
ENSG00000162517 PEF1 -859484 sc-eQTL 1.40e-02 -0.181 0.0732 0.325 CD4_TCM L2
ENSG00000186056 MATN1-AS1 66908 sc-eQTL 1.46e-01 -0.102 0.0699 0.325 CD4_TCM L2
ENSG00000287510 AL137857.1 53719 sc-eQTL 9.17e-02 0.132 0.0777 0.325 CD4_TCM L2
ENSG00000060688 SNRNP40 -511376 sc-eQTL 5.06e-01 0.0622 0.0933 0.325 CD4_TEM L2
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 7.77e-01 0.0252 0.089 0.325 CD4_TEM L2
ENSG00000134644 PUM1 -280579 sc-eQTL 2.13e-01 -0.0923 0.0739 0.325 CD4_TEM L2
ENSG00000162511 LAPTM5 27638 sc-eQTL 3.40e-01 0.0716 0.0748 0.325 CD4_TEM L2
ENSG00000162517 PEF1 -859484 sc-eQTL 1.66e-02 -0.2 0.0829 0.325 CD4_TEM L2
ENSG00000186056 MATN1-AS1 66908 sc-eQTL 4.53e-02 -0.175 0.0869 0.325 CD4_TEM L2
ENSG00000287510 AL137857.1 53719 sc-eQTL 5.13e-01 -0.0566 0.0864 0.325 CD4_TEM L2
ENSG00000060688 SNRNP40 -511376 sc-eQTL 6.67e-01 -0.0444 0.103 0.325 CD8_CTL L2
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 5.11e-02 -0.154 0.0784 0.325 CD8_CTL L2
ENSG00000134644 PUM1 -280579 sc-eQTL 4.27e-01 -0.061 0.0767 0.325 CD8_CTL L2
ENSG00000162511 LAPTM5 27638 sc-eQTL 1.72e-01 0.116 0.0847 0.325 CD8_CTL L2
ENSG00000162517 PEF1 -859484 sc-eQTL 7.66e-01 0.0221 0.074 0.325 CD8_CTL L2
ENSG00000186056 MATN1-AS1 66908 sc-eQTL 5.12e-01 0.0587 0.0893 0.325 CD8_CTL L2
ENSG00000287510 AL137857.1 53719 sc-eQTL 4.97e-01 0.0571 0.084 0.325 CD8_CTL L2
ENSG00000060688 SNRNP40 -511376 sc-eQTL 9.61e-01 0.00464 0.0936 0.325 CD8_Naive L2
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 5.52e-01 -0.0481 0.0807 0.325 CD8_Naive L2
ENSG00000134644 PUM1 -280579 sc-eQTL 7.97e-01 -0.0167 0.065 0.325 CD8_Naive L2
ENSG00000162511 LAPTM5 27638 sc-eQTL 1.13e-01 -0.0986 0.0619 0.325 CD8_Naive L2
ENSG00000162517 PEF1 -859484 sc-eQTL 6.74e-01 0.0365 0.0865 0.325 CD8_Naive L2
ENSG00000186056 MATN1-AS1 66908 sc-eQTL 4.71e-01 0.0561 0.0776 0.325 CD8_Naive L2
ENSG00000287510 AL137857.1 53719 sc-eQTL 6.87e-01 -0.0341 0.0846 0.325 CD8_Naive L2
ENSG00000060688 SNRNP40 -511376 sc-eQTL 9.79e-01 0.00276 0.105 0.317 CD8_TCM L2
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 7.08e-02 -0.173 0.0951 0.317 CD8_TCM L2
ENSG00000134644 PUM1 -280579 sc-eQTL 9.46e-01 -0.0061 0.0901 0.317 CD8_TCM L2
ENSG00000162511 LAPTM5 27638 sc-eQTL 5.08e-01 -0.0625 0.0942 0.317 CD8_TCM L2
ENSG00000162517 PEF1 -859484 sc-eQTL 4.48e-01 0.0732 0.0963 0.317 CD8_TCM L2
ENSG00000186056 MATN1-AS1 66908 sc-eQTL 5.57e-01 -0.0513 0.0873 0.317 CD8_TCM L2
ENSG00000287510 AL137857.1 53719 sc-eQTL 2.35e-01 0.105 0.0879 0.317 CD8_TCM L2
ENSG00000060688 SNRNP40 -511376 sc-eQTL 3.94e-01 -0.0839 0.0981 0.333 CD8_TEM L2
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 5.54e-01 -0.0558 0.0942 0.333 CD8_TEM L2
ENSG00000134644 PUM1 -280579 sc-eQTL 2.28e-01 0.116 0.096 0.333 CD8_TEM L2
ENSG00000162511 LAPTM5 27638 sc-eQTL 1.03e-01 -0.147 0.09 0.333 CD8_TEM L2
ENSG00000162517 PEF1 -859484 sc-eQTL 3.38e-01 -0.0817 0.0851 0.333 CD8_TEM L2
ENSG00000186056 MATN1-AS1 66908 sc-eQTL 8.10e-01 -0.0226 0.094 0.333 CD8_TEM L2
ENSG00000287510 AL137857.1 53719 sc-eQTL 4.13e-01 0.0697 0.0849 0.333 CD8_TEM L2
ENSG00000060688 SNRNP40 -511376 sc-eQTL 3.40e-01 0.0949 0.0993 0.327 MAIT L2
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 5.17e-01 -0.0571 0.0881 0.327 MAIT L2
ENSG00000134644 PUM1 -280579 sc-eQTL 4.09e-01 0.0699 0.0844 0.327 MAIT L2
ENSG00000162511 LAPTM5 27638 sc-eQTL 1.93e-01 -0.104 0.0794 0.327 MAIT L2
ENSG00000162517 PEF1 -859484 sc-eQTL 9.94e-01 0.000665 0.0876 0.327 MAIT L2
ENSG00000186056 MATN1-AS1 66908 sc-eQTL 8.05e-01 0.0219 0.0888 0.327 MAIT L2
ENSG00000287510 AL137857.1 53719 sc-eQTL 6.36e-01 0.0433 0.0914 0.327 MAIT L2
ENSG00000060688 SNRNP40 -511376 sc-eQTL 3.01e-01 -0.105 0.102 0.324 NK_CD56bright L2
ENSG00000121753 ADGRB2 -979481 sc-eQTL 5.49e-01 -0.0478 0.0796 0.324 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 6.47e-02 0.158 0.0853 0.324 NK_CD56bright L2
ENSG00000134644 PUM1 -280579 sc-eQTL 2.80e-01 -0.0976 0.0901 0.324 NK_CD56bright L2
ENSG00000162511 LAPTM5 27638 sc-eQTL 7.04e-01 -0.0339 0.0891 0.324 NK_CD56bright L2
ENSG00000162517 PEF1 -859484 sc-eQTL 4.88e-01 -0.0601 0.0864 0.324 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 66908 sc-eQTL 4.27e-02 -0.181 0.0886 0.324 NK_CD56bright L2
ENSG00000287510 AL137857.1 53719 sc-eQTL 3.11e-01 -0.0893 0.088 0.324 NK_CD56bright L2
ENSG00000060688 SNRNP40 -511376 sc-eQTL 3.58e-01 -0.0894 0.097 0.323 NK_CD56dim L2
ENSG00000121753 ADGRB2 -979481 sc-eQTL 2.83e-01 0.0918 0.0853 0.323 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 8.61e-01 -0.0126 0.0719 0.323 NK_CD56dim L2
ENSG00000134644 PUM1 -280579 sc-eQTL 7.09e-01 -0.0276 0.0738 0.323 NK_CD56dim L2
ENSG00000162511 LAPTM5 27638 sc-eQTL 1.80e-01 0.105 0.0783 0.323 NK_CD56dim L2
ENSG00000162517 PEF1 -859484 sc-eQTL 4.77e-01 -0.0498 0.0699 0.323 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 66908 sc-eQTL 5.57e-01 -0.058 0.0985 0.323 NK_CD56dim L2
ENSG00000287510 AL137857.1 53719 sc-eQTL 5.01e-01 -0.0548 0.0812 0.323 NK_CD56dim L2
ENSG00000060688 SNRNP40 -511376 sc-eQTL 8.84e-01 -0.0154 0.105 0.329 NK_HLA L2
ENSG00000121753 ADGRB2 -979481 sc-eQTL 4.12e-01 0.0684 0.0832 0.329 NK_HLA L2
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 7.57e-01 -0.0291 0.0937 0.329 NK_HLA L2
ENSG00000134644 PUM1 -280579 sc-eQTL 9.82e-01 0.0021 0.0913 0.329 NK_HLA L2
ENSG00000162511 LAPTM5 27638 sc-eQTL 5.28e-01 0.0551 0.0871 0.329 NK_HLA L2
ENSG00000162517 PEF1 -859484 sc-eQTL 7.56e-02 -0.174 0.0974 0.329 NK_HLA L2
ENSG00000186056 MATN1-AS1 66908 sc-eQTL 3.52e-01 0.0864 0.0925 0.329 NK_HLA L2
ENSG00000287510 AL137857.1 53719 sc-eQTL 9.10e-01 0.0102 0.0897 0.329 NK_HLA L2
ENSG00000060688 SNRNP40 -511376 sc-eQTL 7.58e-01 -0.0295 0.0955 0.323 NK_cytokine L2
ENSG00000121753 ADGRB2 -979481 sc-eQTL 8.28e-01 0.0188 0.0863 0.323 NK_cytokine L2
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 5.89e-01 -0.0404 0.0745 0.323 NK_cytokine L2
ENSG00000134644 PUM1 -280579 sc-eQTL 3.99e-01 0.0681 0.0805 0.323 NK_cytokine L2
ENSG00000162511 LAPTM5 27638 sc-eQTL 3.16e-01 0.089 0.0886 0.323 NK_cytokine L2
ENSG00000162517 PEF1 -859484 sc-eQTL 3.49e-01 -0.0709 0.0755 0.323 NK_cytokine L2
ENSG00000186056 MATN1-AS1 66908 sc-eQTL 9.30e-01 -0.00826 0.0941 0.323 NK_cytokine L2
ENSG00000287510 AL137857.1 53719 sc-eQTL 3.53e-01 -0.0814 0.0874 0.323 NK_cytokine L2
ENSG00000060688 SNRNP40 -511376 sc-eQTL 4.31e-01 -0.087 0.11 0.348 PB L2
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 4.79e-01 0.0906 0.128 0.348 PB L2
ENSG00000134644 PUM1 -280579 sc-eQTL 5.84e-01 -0.061 0.111 0.348 PB L2
ENSG00000162510 MATN1 61827 sc-eQTL 7.55e-01 -0.0323 0.104 0.348 PB L2
ENSG00000162511 LAPTM5 27638 sc-eQTL 7.91e-01 0.0196 0.074 0.348 PB L2
ENSG00000162517 PEF1 -859484 sc-eQTL 4.02e-01 -0.0957 0.114 0.348 PB L2
ENSG00000186056 MATN1-AS1 66908 sc-eQTL 3.15e-01 0.102 0.101 0.348 PB L2
ENSG00000287510 AL137857.1 53719 sc-eQTL 1.24e-01 0.166 0.107 0.348 PB L2
ENSG00000060688 SNRNP40 -511376 sc-eQTL 7.18e-01 0.0271 0.0747 0.32 Pro_T L2
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 7.38e-05 0.37 0.0914 0.32 Pro_T L2
ENSG00000134644 PUM1 -280579 sc-eQTL 2.51e-01 0.102 0.0882 0.32 Pro_T L2
ENSG00000162511 LAPTM5 27638 sc-eQTL 8.52e-01 -0.0118 0.0635 0.32 Pro_T L2
ENSG00000162517 PEF1 -859484 sc-eQTL 2.64e-01 -0.104 0.0929 0.32 Pro_T L2
ENSG00000186056 MATN1-AS1 66908 sc-eQTL 4.59e-01 -0.0657 0.0886 0.32 Pro_T L2
ENSG00000287510 AL137857.1 53719 sc-eQTL 8.73e-01 0.0131 0.0816 0.32 Pro_T L2
ENSG00000060688 SNRNP40 -511376 sc-eQTL 3.72e-01 -0.0857 0.0958 0.325 Treg L2
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 5.68e-02 -0.176 0.092 0.325 Treg L2
ENSG00000134644 PUM1 -280579 sc-eQTL 3.96e-01 -0.063 0.0742 0.325 Treg L2
ENSG00000162511 LAPTM5 27638 sc-eQTL 7.19e-02 -0.153 0.0844 0.325 Treg L2
ENSG00000162517 PEF1 -859484 sc-eQTL 9.98e-01 0.000181 0.0919 0.325 Treg L2
ENSG00000186056 MATN1-AS1 66908 sc-eQTL 9.37e-01 -0.00686 0.0867 0.325 Treg L2
ENSG00000287510 AL137857.1 53719 sc-eQTL 2.13e-01 0.108 0.0863 0.325 Treg L2
ENSG00000060688 SNRNP40 -511376 sc-eQTL 5.97e-01 -0.0517 0.0976 0.317 cDC L2
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 1.33e-01 -0.159 0.105 0.317 cDC L2
ENSG00000134644 PUM1 -280579 sc-eQTL 3.92e-02 -0.186 0.0897 0.317 cDC L2
ENSG00000162511 LAPTM5 27638 sc-eQTL 5.06e-01 0.0424 0.0636 0.317 cDC L2
ENSG00000162517 PEF1 -859484 sc-eQTL 8.41e-01 0.0185 0.0921 0.317 cDC L2
ENSG00000168528 SERINC2 -624153 sc-eQTL 5.76e-01 0.0457 0.0816 0.317 cDC L2
ENSG00000284543 LINC01226 -720814 sc-eQTL 5.35e-01 0.0499 0.0802 0.317 cDC L2
ENSG00000287510 AL137857.1 53719 sc-eQTL 5.91e-01 0.0465 0.0864 0.317 cDC L2
ENSG00000060688 SNRNP40 -511376 sc-eQTL 5.86e-02 -0.148 0.0777 0.325 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 7.35e-01 0.0296 0.0874 0.325 cMono_IL1B L2
ENSG00000134644 PUM1 -280579 sc-eQTL 7.23e-01 0.021 0.0592 0.325 cMono_IL1B L2
ENSG00000162511 LAPTM5 27638 sc-eQTL 1.95e-01 0.0673 0.0517 0.325 cMono_IL1B L2
ENSG00000162512 SDC3 -123346 sc-eQTL 8.21e-01 0.0222 0.0979 0.325 cMono_IL1B L2
ENSG00000162517 PEF1 -859484 sc-eQTL 7.72e-02 -0.141 0.0794 0.325 cMono_IL1B L2
ENSG00000168528 SERINC2 -624153 sc-eQTL 5.34e-01 -0.0616 0.099 0.325 cMono_IL1B L2
ENSG00000284543 LINC01226 -720814 sc-eQTL 2.24e-01 -0.106 0.0873 0.325 cMono_IL1B L2
ENSG00000287510 AL137857.1 53719 sc-eQTL 3.28e-01 0.0798 0.0815 0.325 cMono_IL1B L2
ENSG00000060688 SNRNP40 -511376 sc-eQTL 9.76e-01 0.00241 0.0814 0.325 cMono_S100A L2
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 8.30e-01 -0.0207 0.0961 0.325 cMono_S100A L2
ENSG00000134644 PUM1 -280579 sc-eQTL 3.17e-01 -0.0696 0.0693 0.325 cMono_S100A L2
ENSG00000162511 LAPTM5 27638 sc-eQTL 9.79e-02 0.0882 0.0531 0.325 cMono_S100A L2
ENSG00000162512 SDC3 -123346 sc-eQTL 8.58e-01 0.0165 0.0922 0.325 cMono_S100A L2
ENSG00000162517 PEF1 -859484 sc-eQTL 2.41e-01 -0.0976 0.083 0.325 cMono_S100A L2
ENSG00000168528 SERINC2 -624153 sc-eQTL 7.85e-01 -0.0267 0.0977 0.325 cMono_S100A L2
ENSG00000284543 LINC01226 -720814 sc-eQTL 4.99e-01 0.0536 0.0793 0.325 cMono_S100A L2
ENSG00000287510 AL137857.1 53719 sc-eQTL 8.70e-01 -0.0131 0.0797 0.325 cMono_S100A L2
ENSG00000060688 SNRNP40 -511376 sc-eQTL 6.97e-01 0.0468 0.12 0.327 gdT L2
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 6.75e-01 -0.0433 0.103 0.327 gdT L2
ENSG00000134644 PUM1 -280579 sc-eQTL 9.82e-01 0.00235 0.106 0.327 gdT L2
ENSG00000162511 LAPTM5 27638 sc-eQTL 3.32e-01 -0.112 0.115 0.327 gdT L2
ENSG00000162517 PEF1 -859484 sc-eQTL 8.54e-01 -0.0195 0.106 0.327 gdT L2
ENSG00000186056 MATN1-AS1 66908 sc-eQTL 9.84e-01 -0.0021 0.107 0.327 gdT L2
ENSG00000287510 AL137857.1 53719 sc-eQTL 1.64e-01 -0.144 0.103 0.327 gdT L2
ENSG00000060688 SNRNP40 -511376 sc-eQTL 3.02e-01 -0.0964 0.0931 0.331 intMono L2
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 1.36e-01 0.149 0.0998 0.331 intMono L2
ENSG00000134644 PUM1 -280579 sc-eQTL 9.76e-01 0.00253 0.0852 0.331 intMono L2
ENSG00000162511 LAPTM5 27638 sc-eQTL 1.05e-02 0.17 0.0657 0.331 intMono L2
ENSG00000162512 SDC3 -123346 sc-eQTL 1.76e-01 0.124 0.0911 0.331 intMono L2
ENSG00000162517 PEF1 -859484 sc-eQTL 5.85e-01 -0.0526 0.0961 0.331 intMono L2
ENSG00000168528 SERINC2 -624153 sc-eQTL 3.54e-01 0.0889 0.0956 0.331 intMono L2
ENSG00000284543 LINC01226 -720814 sc-eQTL 1.52e-01 -0.13 0.0903 0.331 intMono L2
ENSG00000287510 AL137857.1 53719 sc-eQTL 2.68e-01 0.1 0.0905 0.331 intMono L2
ENSG00000060688 SNRNP40 -511376 sc-eQTL 7.55e-01 0.0272 0.087 0.33 ncMono L2
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 8.18e-01 -0.0213 0.0928 0.33 ncMono L2
ENSG00000134644 PUM1 -280579 sc-eQTL 8.43e-01 0.015 0.0758 0.33 ncMono L2
ENSG00000162511 LAPTM5 27638 sc-eQTL 5.90e-01 0.0371 0.0688 0.33 ncMono L2
ENSG00000162512 SDC3 -123346 sc-eQTL 6.82e-01 0.0317 0.0772 0.33 ncMono L2
ENSG00000162517 PEF1 -859484 sc-eQTL 3.04e-01 -0.0909 0.0883 0.33 ncMono L2
ENSG00000168528 SERINC2 -624153 sc-eQTL 8.31e-01 0.018 0.0842 0.33 ncMono L2
ENSG00000284543 LINC01226 -720814 sc-eQTL 2.97e-01 0.0877 0.0839 0.33 ncMono L2
ENSG00000287510 AL137857.1 53719 sc-eQTL 1.01e-01 0.143 0.0867 0.33 ncMono L2
ENSG00000060688 SNRNP40 -511376 sc-eQTL 6.13e-01 -0.0502 0.0989 0.314 pDC L2
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 9.38e-02 -0.182 0.108 0.314 pDC L2
ENSG00000134644 PUM1 -280579 sc-eQTL 6.97e-01 0.0351 0.0901 0.314 pDC L2
ENSG00000162511 LAPTM5 27638 sc-eQTL 1.52e-01 0.12 0.0832 0.314 pDC L2
ENSG00000162517 PEF1 -859484 sc-eQTL 6.06e-01 0.0562 0.109 0.314 pDC L2
ENSG00000168528 SERINC2 -624153 sc-eQTL 7.97e-01 0.0261 0.102 0.314 pDC L2
ENSG00000284543 LINC01226 -720814 sc-eQTL 7.59e-01 0.0242 0.0788 0.314 pDC L2
ENSG00000287510 AL137857.1 53719 sc-eQTL 8.49e-01 -0.0177 0.0928 0.314 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -511376 sc-eQTL 7.33e-01 0.0328 0.0962 0.325 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 7.96e-01 -0.0207 0.0801 0.325 B_Memory LOneK1K
ENSG00000134644 PUM1 -280579 sc-eQTL 3.38e-01 -0.068 0.0708 0.325 B_Memory LOneK1K
ENSG00000162510 MATN1 61827 sc-eQTL 5.92e-01 -0.0434 0.0809 0.325 B_Memory LOneK1K
ENSG00000162511 LAPTM5 27638 sc-eQTL 8.77e-01 0.00788 0.0508 0.325 B_Memory LOneK1K
ENSG00000162517 PEF1 -859484 sc-eQTL 8.02e-01 -0.0212 0.0842 0.325 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 66908 sc-eQTL 8.08e-01 -0.0163 0.0672 0.325 B_Memory LOneK1K
ENSG00000287510 AL137857.1 53719 sc-eQTL 6.79e-01 -0.0304 0.0733 0.325 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -511376 sc-eQTL 1.34e-01 0.133 0.0882 0.325 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 8.33e-01 0.0148 0.0701 0.325 B_Naive LOneK1K
ENSG00000134644 PUM1 -280579 sc-eQTL 1.40e-01 0.0977 0.0659 0.325 B_Naive LOneK1K
ENSG00000162510 MATN1 61827 sc-eQTL 7.15e-01 -0.0233 0.0638 0.325 B_Naive LOneK1K
ENSG00000162511 LAPTM5 27638 sc-eQTL 9.90e-02 0.074 0.0446 0.325 B_Naive LOneK1K
ENSG00000162517 PEF1 -859484 sc-eQTL 7.73e-01 -0.0237 0.082 0.325 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 66908 sc-eQTL 4.91e-01 0.04 0.058 0.325 B_Naive LOneK1K
ENSG00000287510 AL137857.1 53719 sc-eQTL 7.11e-01 0.0256 0.0689 0.325 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -511376 sc-eQTL 5.63e-02 -0.141 0.0735 0.325 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 7.83e-01 -0.0231 0.0839 0.325 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -280579 sc-eQTL 8.91e-01 0.00736 0.0535 0.325 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 27638 sc-eQTL 1.46e-01 0.0684 0.0468 0.325 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -123346 sc-eQTL 7.97e-01 0.0247 0.096 0.325 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -859484 sc-eQTL 3.59e-02 -0.141 0.0668 0.325 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -624153 sc-eQTL 7.34e-01 -0.0336 0.0987 0.325 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -720814 sc-eQTL 4.18e-01 -0.0656 0.0809 0.325 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 53719 sc-eQTL 3.45e-01 0.0716 0.0757 0.325 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -511376 sc-eQTL 6.64e-01 -0.0359 0.0825 0.325 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 2.66e-01 0.1 0.0901 0.325 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -280579 sc-eQTL 9.68e-01 0.00296 0.074 0.325 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 27638 sc-eQTL 1.45e-01 0.0861 0.0589 0.325 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -123346 sc-eQTL 3.54e-01 0.0801 0.0863 0.325 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -859484 sc-eQTL 4.10e-01 -0.0647 0.0785 0.325 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -624153 sc-eQTL 5.92e-01 0.0482 0.0896 0.325 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -720814 sc-eQTL 5.37e-01 -0.0526 0.085 0.325 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 53719 sc-eQTL 8.57e-02 0.146 0.0846 0.325 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -511376 sc-eQTL 3.82e-01 -0.0802 0.0916 0.323 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -979481 sc-eQTL 3.01e-01 0.0808 0.0779 0.323 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -511570 sc-eQTL 4.48e-01 -0.0476 0.0626 0.323 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -280579 sc-eQTL 6.28e-01 0.0333 0.0686 0.323 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 27638 sc-eQTL 1.13e-01 0.121 0.0763 0.323 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -859484 sc-eQTL 3.09e-01 -0.0593 0.0582 0.323 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 66908 sc-eQTL 6.78e-01 0.0367 0.0885 0.323 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 53719 sc-eQTL 8.95e-01 0.0101 0.0764 0.323 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000121766 ZCCHC17 -511570 eQTL 1.08e-02 0.0506 0.0198 0.0 0.0 0.311
ENSG00000186056 MATN1-AS1 66908 eQTL 1.41e-02 0.0346 0.0141 0.00155 0.0 0.311

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000186056 MATN1-AS1 66908 8.31e-06 5.93e-06 6.91e-07 3.29e-06 1.59e-06 1.98e-06 6.35e-06 9.79e-07 5.13e-06 2.99e-06 6.19e-06 3.24e-06 7.67e-06 1.72e-06 1.02e-06 3.81e-06 1.84e-06 3.8e-06 1.57e-06 1.15e-06 2.77e-06 4.73e-06 4.73e-06 1.34e-06 8.55e-06 1.99e-06 2.95e-06 1.77e-06 4.41e-06 4.61e-06 2.62e-06 5.41e-07 5.47e-07 1.44e-06 2.01e-06 9.71e-07 9.16e-07 4.24e-07 9.49e-07 4.26e-07 2.66e-07 7.98e-06 9.75e-07 1.89e-07 6.07e-07 6.92e-07 1.11e-06 3.79e-07 3.18e-07