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Genes within 1Mb (chr1:30781371:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -515417 sc-eQTL 3.70e-01 0.0768 0.0855 0.282 B L1
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 7.94e-01 -0.0179 0.0686 0.282 B L1
ENSG00000134644 PUM1 -284620 sc-eQTL 9.03e-01 0.00704 0.0575 0.282 B L1
ENSG00000162510 MATN1 57786 sc-eQTL 1.95e-03 -0.186 0.0591 0.282 B L1
ENSG00000162511 LAPTM5 23597 sc-eQTL 2.81e-02 -0.104 0.0468 0.282 B L1
ENSG00000162517 PEF1 -863525 sc-eQTL 8.71e-01 -0.0116 0.0715 0.282 B L1
ENSG00000186056 MATN1-AS1 62867 sc-eQTL 3.60e-04 -0.195 0.0539 0.282 B L1
ENSG00000287510 AL137857.1 49678 sc-eQTL 6.94e-01 -0.0258 0.0657 0.282 B L1
ENSG00000060688 SNRNP40 -515417 sc-eQTL 9.78e-01 0.00207 0.0733 0.282 CD4T L1
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 5.56e-01 0.0337 0.0572 0.282 CD4T L1
ENSG00000134644 PUM1 -284620 sc-eQTL 2.50e-01 0.0586 0.0508 0.282 CD4T L1
ENSG00000162511 LAPTM5 23597 sc-eQTL 9.40e-02 -0.0944 0.0561 0.282 CD4T L1
ENSG00000162517 PEF1 -863525 sc-eQTL 4.06e-01 0.0491 0.059 0.282 CD4T L1
ENSG00000186056 MATN1-AS1 62867 sc-eQTL 6.43e-01 0.0234 0.0505 0.282 CD4T L1
ENSG00000287510 AL137857.1 49678 sc-eQTL 2.83e-01 0.065 0.0604 0.282 CD4T L1
ENSG00000060688 SNRNP40 -515417 sc-eQTL 6.58e-01 0.043 0.097 0.282 CD8T L1
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 8.99e-01 -0.00819 0.0646 0.282 CD8T L1
ENSG00000134644 PUM1 -284620 sc-eQTL 3.11e-01 0.0575 0.0567 0.282 CD8T L1
ENSG00000162511 LAPTM5 23597 sc-eQTL 8.63e-01 0.00955 0.0552 0.282 CD8T L1
ENSG00000162517 PEF1 -863525 sc-eQTL 3.62e-01 0.062 0.0679 0.282 CD8T L1
ENSG00000186056 MATN1-AS1 62867 sc-eQTL 4.86e-01 -0.0451 0.0646 0.282 CD8T L1
ENSG00000287510 AL137857.1 49678 sc-eQTL 7.09e-01 0.0304 0.0813 0.282 CD8T L1
ENSG00000060688 SNRNP40 -515417 sc-eQTL 2.99e-01 -0.0893 0.0858 0.282 DC L1
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 9.62e-01 0.00487 0.102 0.282 DC L1
ENSG00000134644 PUM1 -284620 sc-eQTL 1.59e-01 0.112 0.0794 0.282 DC L1
ENSG00000162511 LAPTM5 23597 sc-eQTL 3.31e-02 0.121 0.0563 0.282 DC L1
ENSG00000162517 PEF1 -863525 sc-eQTL 7.73e-01 0.0267 0.0923 0.282 DC L1
ENSG00000168528 SERINC2 -628194 sc-eQTL 9.26e-01 -0.00871 0.0939 0.282 DC L1
ENSG00000284543 LINC01226 -724855 sc-eQTL 8.51e-01 -0.0117 0.0622 0.282 DC L1
ENSG00000287510 AL137857.1 49678 sc-eQTL 1.01e-01 -0.148 0.0895 0.282 DC L1
ENSG00000060688 SNRNP40 -515417 sc-eQTL 1.80e-01 0.0903 0.0672 0.282 Mono L1
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 6.45e-01 0.0386 0.0836 0.282 Mono L1
ENSG00000134644 PUM1 -284620 sc-eQTL 1.67e-01 -0.0739 0.0534 0.282 Mono L1
ENSG00000162511 LAPTM5 23597 sc-eQTL 7.91e-01 -0.0131 0.0493 0.282 Mono L1
ENSG00000162512 SDC3 -127387 sc-eQTL 1.56e-01 -0.134 0.0943 0.282 Mono L1
ENSG00000162517 PEF1 -863525 sc-eQTL 6.03e-01 -0.0346 0.0665 0.282 Mono L1
ENSG00000168528 SERINC2 -628194 sc-eQTL 6.71e-01 0.0432 0.102 0.282 Mono L1
ENSG00000284543 LINC01226 -724855 sc-eQTL 1.09e-01 0.143 0.089 0.282 Mono L1
ENSG00000287510 AL137857.1 49678 sc-eQTL 1.66e-01 0.108 0.0779 0.282 Mono L1
ENSG00000060688 SNRNP40 -515417 sc-eQTL 7.02e-01 -0.0358 0.0932 0.281 NK L1
ENSG00000121753 ADGRB2 -983522 sc-eQTL 3.04e-01 0.0826 0.0801 0.281 NK L1
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 7.45e-01 -0.0208 0.0638 0.281 NK L1
ENSG00000134644 PUM1 -284620 sc-eQTL 9.19e-01 -0.00686 0.067 0.281 NK L1
ENSG00000162511 LAPTM5 23597 sc-eQTL 3.65e-04 0.271 0.0748 0.281 NK L1
ENSG00000162517 PEF1 -863525 sc-eQTL 3.82e-01 0.0492 0.0562 0.281 NK L1
ENSG00000186056 MATN1-AS1 62867 sc-eQTL 4.55e-01 -0.0648 0.0865 0.281 NK L1
ENSG00000287510 AL137857.1 49678 sc-eQTL 1.13e-01 0.126 0.0795 0.281 NK L1
ENSG00000060688 SNRNP40 -515417 sc-eQTL 9.45e-01 -0.00481 0.0698 0.282 Other_T L1
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 3.28e-01 -0.073 0.0744 0.282 Other_T L1
ENSG00000134644 PUM1 -284620 sc-eQTL 5.74e-01 -0.0378 0.067 0.282 Other_T L1
ENSG00000162511 LAPTM5 23597 sc-eQTL 6.91e-01 -0.0219 0.0549 0.282 Other_T L1
ENSG00000162517 PEF1 -863525 sc-eQTL 1.22e-01 0.113 0.073 0.282 Other_T L1
ENSG00000186056 MATN1-AS1 62867 sc-eQTL 5.22e-01 -0.0577 0.0899 0.282 Other_T L1
ENSG00000287510 AL137857.1 49678 sc-eQTL 6.32e-01 -0.045 0.0937 0.282 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -515417 sc-eQTL 7.17e-01 0.0406 0.112 0.268 B_Activated L2
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 9.43e-01 0.00813 0.113 0.268 B_Activated L2
ENSG00000134644 PUM1 -284620 sc-eQTL 5.67e-02 -0.199 0.104 0.268 B_Activated L2
ENSG00000162510 MATN1 57786 sc-eQTL 9.26e-02 -0.153 0.0907 0.268 B_Activated L2
ENSG00000162511 LAPTM5 23597 sc-eQTL 3.42e-02 -0.134 0.063 0.268 B_Activated L2
ENSG00000162517 PEF1 -863525 sc-eQTL 8.05e-01 0.0269 0.109 0.268 B_Activated L2
ENSG00000186056 MATN1-AS1 62867 sc-eQTL 6.67e-01 -0.0444 0.103 0.268 B_Activated L2
ENSG00000287510 AL137857.1 49678 sc-eQTL 6.18e-01 0.0455 0.0911 0.268 B_Activated L2
ENSG00000060688 SNRNP40 -515417 sc-eQTL 9.73e-02 0.174 0.104 0.283 B_Intermediate L2
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 3.35e-01 0.0844 0.0873 0.283 B_Intermediate L2
ENSG00000134644 PUM1 -284620 sc-eQTL 5.88e-01 -0.0448 0.0825 0.283 B_Intermediate L2
ENSG00000162510 MATN1 57786 sc-eQTL 3.84e-01 -0.0749 0.0857 0.283 B_Intermediate L2
ENSG00000162511 LAPTM5 23597 sc-eQTL 2.50e-01 -0.0607 0.0526 0.283 B_Intermediate L2
ENSG00000162517 PEF1 -863525 sc-eQTL 8.88e-01 -0.0138 0.0979 0.283 B_Intermediate L2
ENSG00000186056 MATN1-AS1 62867 sc-eQTL 8.53e-01 0.0138 0.074 0.283 B_Intermediate L2
ENSG00000287510 AL137857.1 49678 sc-eQTL 1.64e-01 -0.115 0.0824 0.283 B_Intermediate L2
ENSG00000060688 SNRNP40 -515417 sc-eQTL 4.29e-01 0.0798 0.101 0.284 B_Memory L2
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 2.60e-01 -0.105 0.0926 0.284 B_Memory L2
ENSG00000134644 PUM1 -284620 sc-eQTL 2.02e-01 -0.103 0.0805 0.284 B_Memory L2
ENSG00000162510 MATN1 57786 sc-eQTL 9.46e-01 0.00529 0.0773 0.284 B_Memory L2
ENSG00000162511 LAPTM5 23597 sc-eQTL 3.39e-04 -0.242 0.0665 0.284 B_Memory L2
ENSG00000162517 PEF1 -863525 sc-eQTL 9.88e-01 0.00141 0.0915 0.284 B_Memory L2
ENSG00000186056 MATN1-AS1 62867 sc-eQTL 3.78e-01 -0.0692 0.0783 0.284 B_Memory L2
ENSG00000287510 AL137857.1 49678 sc-eQTL 1.08e-01 -0.147 0.0913 0.284 B_Memory L2
ENSG00000060688 SNRNP40 -515417 sc-eQTL 8.32e-02 0.162 0.0929 0.282 B_Naive1 L2
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 7.10e-01 -0.0301 0.0807 0.282 B_Naive1 L2
ENSG00000134644 PUM1 -284620 sc-eQTL 8.94e-01 0.00949 0.0712 0.282 B_Naive1 L2
ENSG00000162510 MATN1 57786 sc-eQTL 7.07e-02 -0.13 0.0717 0.282 B_Naive1 L2
ENSG00000162511 LAPTM5 23597 sc-eQTL 7.91e-02 -0.0846 0.0479 0.282 B_Naive1 L2
ENSG00000162517 PEF1 -863525 sc-eQTL 1.68e-01 0.117 0.0847 0.282 B_Naive1 L2
ENSG00000186056 MATN1-AS1 62867 sc-eQTL 3.89e-03 -0.182 0.0622 0.282 B_Naive1 L2
ENSG00000287510 AL137857.1 49678 sc-eQTL 9.39e-01 0.006 0.0783 0.282 B_Naive1 L2
ENSG00000060688 SNRNP40 -515417 sc-eQTL 4.15e-01 -0.081 0.0992 0.283 B_Naive2 L2
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 6.44e-01 -0.038 0.082 0.283 B_Naive2 L2
ENSG00000134644 PUM1 -284620 sc-eQTL 9.98e-01 0.00016 0.0803 0.283 B_Naive2 L2
ENSG00000162510 MATN1 57786 sc-eQTL 1.71e-01 -0.105 0.0767 0.283 B_Naive2 L2
ENSG00000162511 LAPTM5 23597 sc-eQTL 7.13e-02 -0.0941 0.0519 0.283 B_Naive2 L2
ENSG00000162517 PEF1 -863525 sc-eQTL 1.94e-01 -0.124 0.0948 0.283 B_Naive2 L2
ENSG00000186056 MATN1-AS1 62867 sc-eQTL 1.16e-02 -0.191 0.075 0.283 B_Naive2 L2
ENSG00000287510 AL137857.1 49678 sc-eQTL 6.85e-01 -0.0335 0.0823 0.283 B_Naive2 L2
ENSG00000060688 SNRNP40 -515417 sc-eQTL 9.99e-01 -6.71e-05 0.0982 0.282 CD4_CTL L2
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 1.57e-01 0.137 0.0961 0.282 CD4_CTL L2
ENSG00000134644 PUM1 -284620 sc-eQTL 7.33e-01 0.0324 0.0947 0.282 CD4_CTL L2
ENSG00000162511 LAPTM5 23597 sc-eQTL 9.23e-01 0.00818 0.0845 0.282 CD4_CTL L2
ENSG00000162517 PEF1 -863525 sc-eQTL 5.31e-01 -0.0543 0.0865 0.282 CD4_CTL L2
ENSG00000186056 MATN1-AS1 62867 sc-eQTL 5.01e-01 -0.0623 0.0923 0.282 CD4_CTL L2
ENSG00000287510 AL137857.1 49678 sc-eQTL 4.40e-01 0.063 0.0814 0.282 CD4_CTL L2
ENSG00000060688 SNRNP40 -515417 sc-eQTL 1.10e-01 -0.122 0.0761 0.282 CD4_Naive L2
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 5.87e-01 0.0369 0.0678 0.282 CD4_Naive L2
ENSG00000134644 PUM1 -284620 sc-eQTL 3.03e-01 0.0559 0.0541 0.282 CD4_Naive L2
ENSG00000162511 LAPTM5 23597 sc-eQTL 7.54e-02 -0.103 0.0576 0.282 CD4_Naive L2
ENSG00000162517 PEF1 -863525 sc-eQTL 9.55e-01 0.00361 0.0637 0.282 CD4_Naive L2
ENSG00000186056 MATN1-AS1 62867 sc-eQTL 3.12e-01 0.0596 0.0588 0.282 CD4_Naive L2
ENSG00000287510 AL137857.1 49678 sc-eQTL 2.57e-01 0.0767 0.0675 0.282 CD4_Naive L2
ENSG00000060688 SNRNP40 -515417 sc-eQTL 1.00e-01 0.158 0.0958 0.282 CD4_TCM L2
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 3.76e-01 0.0687 0.0776 0.282 CD4_TCM L2
ENSG00000134644 PUM1 -284620 sc-eQTL 7.13e-01 0.0253 0.0688 0.282 CD4_TCM L2
ENSG00000162511 LAPTM5 23597 sc-eQTL 1.88e-01 -0.0751 0.0568 0.282 CD4_TCM L2
ENSG00000162517 PEF1 -863525 sc-eQTL 3.57e-02 0.16 0.0757 0.282 CD4_TCM L2
ENSG00000186056 MATN1-AS1 62867 sc-eQTL 4.10e-01 -0.0596 0.0723 0.282 CD4_TCM L2
ENSG00000287510 AL137857.1 49678 sc-eQTL 9.15e-01 -0.00861 0.0806 0.282 CD4_TCM L2
ENSG00000060688 SNRNP40 -515417 sc-eQTL 3.08e-01 0.0979 0.0958 0.282 CD4_TEM L2
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 3.25e-01 -0.0901 0.0913 0.282 CD4_TEM L2
ENSG00000134644 PUM1 -284620 sc-eQTL 3.87e-02 0.157 0.0755 0.282 CD4_TEM L2
ENSG00000162511 LAPTM5 23597 sc-eQTL 3.11e-02 -0.166 0.0763 0.282 CD4_TEM L2
ENSG00000162517 PEF1 -863525 sc-eQTL 9.32e-01 0.00736 0.0864 0.282 CD4_TEM L2
ENSG00000186056 MATN1-AS1 62867 sc-eQTL 8.40e-01 -0.0183 0.0902 0.282 CD4_TEM L2
ENSG00000287510 AL137857.1 49678 sc-eQTL 3.46e-01 0.0838 0.0887 0.282 CD4_TEM L2
ENSG00000060688 SNRNP40 -515417 sc-eQTL 5.96e-01 0.0565 0.107 0.282 CD8_CTL L2
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 5.75e-01 0.0458 0.0817 0.282 CD8_CTL L2
ENSG00000134644 PUM1 -284620 sc-eQTL 7.76e-01 -0.0226 0.0793 0.282 CD8_CTL L2
ENSG00000162511 LAPTM5 23597 sc-eQTL 3.39e-02 0.186 0.087 0.282 CD8_CTL L2
ENSG00000162517 PEF1 -863525 sc-eQTL 3.32e-01 0.0742 0.0764 0.282 CD8_CTL L2
ENSG00000186056 MATN1-AS1 62867 sc-eQTL 2.40e-01 -0.108 0.0921 0.282 CD8_CTL L2
ENSG00000287510 AL137857.1 49678 sc-eQTL 2.13e-02 0.199 0.0858 0.282 CD8_CTL L2
ENSG00000060688 SNRNP40 -515417 sc-eQTL 5.25e-01 -0.0614 0.0963 0.282 CD8_Naive L2
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 5.26e-01 -0.0527 0.0831 0.282 CD8_Naive L2
ENSG00000134644 PUM1 -284620 sc-eQTL 5.09e-01 0.0442 0.0668 0.282 CD8_Naive L2
ENSG00000162511 LAPTM5 23597 sc-eQTL 2.04e-01 -0.0813 0.0639 0.282 CD8_Naive L2
ENSG00000162517 PEF1 -863525 sc-eQTL 5.68e-01 -0.0509 0.0891 0.282 CD8_Naive L2
ENSG00000186056 MATN1-AS1 62867 sc-eQTL 6.11e-01 -0.0407 0.08 0.282 CD8_Naive L2
ENSG00000287510 AL137857.1 49678 sc-eQTL 4.01e-01 0.0732 0.087 0.282 CD8_Naive L2
ENSG00000060688 SNRNP40 -515417 sc-eQTL 9.05e-01 -0.0126 0.105 0.294 CD8_TCM L2
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 2.64e-01 -0.107 0.0958 0.294 CD8_TCM L2
ENSG00000134644 PUM1 -284620 sc-eQTL 2.54e-01 -0.103 0.0901 0.294 CD8_TCM L2
ENSG00000162511 LAPTM5 23597 sc-eQTL 7.70e-01 -0.0277 0.0946 0.294 CD8_TCM L2
ENSG00000162517 PEF1 -863525 sc-eQTL 6.19e-01 -0.0481 0.0966 0.294 CD8_TCM L2
ENSG00000186056 MATN1-AS1 62867 sc-eQTL 5.92e-01 0.047 0.0875 0.294 CD8_TCM L2
ENSG00000287510 AL137857.1 49678 sc-eQTL 5.59e-01 -0.0518 0.0885 0.294 CD8_TCM L2
ENSG00000060688 SNRNP40 -515417 sc-eQTL 6.32e-01 -0.0483 0.101 0.283 CD8_TEM L2
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 7.77e-02 0.17 0.0957 0.283 CD8_TEM L2
ENSG00000134644 PUM1 -284620 sc-eQTL 7.33e-01 0.0336 0.0986 0.283 CD8_TEM L2
ENSG00000162511 LAPTM5 23597 sc-eQTL 4.72e-01 0.0667 0.0926 0.283 CD8_TEM L2
ENSG00000162517 PEF1 -863525 sc-eQTL 6.57e-01 0.0388 0.0872 0.283 CD8_TEM L2
ENSG00000186056 MATN1-AS1 62867 sc-eQTL 7.97e-01 0.0248 0.0962 0.283 CD8_TEM L2
ENSG00000287510 AL137857.1 49678 sc-eQTL 4.53e-01 -0.0653 0.0869 0.283 CD8_TEM L2
ENSG00000060688 SNRNP40 -515417 sc-eQTL 6.57e-01 -0.0455 0.102 0.284 MAIT L2
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 9.52e-01 0.00543 0.0907 0.284 MAIT L2
ENSG00000134644 PUM1 -284620 sc-eQTL 6.52e-01 -0.0392 0.0869 0.284 MAIT L2
ENSG00000162511 LAPTM5 23597 sc-eQTL 4.42e-01 -0.0631 0.0819 0.284 MAIT L2
ENSG00000162517 PEF1 -863525 sc-eQTL 2.33e-02 0.203 0.089 0.284 MAIT L2
ENSG00000186056 MATN1-AS1 62867 sc-eQTL 4.58e-01 -0.0678 0.0912 0.284 MAIT L2
ENSG00000287510 AL137857.1 49678 sc-eQTL 7.15e-01 -0.0344 0.0941 0.284 MAIT L2
ENSG00000060688 SNRNP40 -515417 sc-eQTL 9.34e-01 0.00855 0.103 0.28 NK_CD56bright L2
ENSG00000121753 ADGRB2 -983522 sc-eQTL 4.45e-02 0.162 0.0801 0.28 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 4.89e-02 -0.171 0.0865 0.28 NK_CD56bright L2
ENSG00000134644 PUM1 -284620 sc-eQTL 1.40e-01 0.135 0.0912 0.28 NK_CD56bright L2
ENSG00000162511 LAPTM5 23597 sc-eQTL 3.94e-04 0.316 0.0877 0.28 NK_CD56bright L2
ENSG00000162517 PEF1 -863525 sc-eQTL 8.97e-01 -0.0114 0.0879 0.28 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 62867 sc-eQTL 5.45e-01 -0.055 0.0908 0.28 NK_CD56bright L2
ENSG00000287510 AL137857.1 49678 sc-eQTL 6.51e-01 0.0405 0.0895 0.28 NK_CD56bright L2
ENSG00000060688 SNRNP40 -515417 sc-eQTL 9.38e-01 -0.00762 0.0983 0.28 NK_CD56dim L2
ENSG00000121753 ADGRB2 -983522 sc-eQTL 4.51e-01 0.0653 0.0864 0.28 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 3.02e-01 0.075 0.0725 0.28 NK_CD56dim L2
ENSG00000134644 PUM1 -284620 sc-eQTL 6.78e-01 0.031 0.0746 0.28 NK_CD56dim L2
ENSG00000162511 LAPTM5 23597 sc-eQTL 6.15e-03 0.216 0.0781 0.28 NK_CD56dim L2
ENSG00000162517 PEF1 -863525 sc-eQTL 5.26e-01 0.0449 0.0707 0.28 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 62867 sc-eQTL 2.37e-01 -0.118 0.0993 0.28 NK_CD56dim L2
ENSG00000287510 AL137857.1 49678 sc-eQTL 3.20e-01 0.0818 0.082 0.28 NK_CD56dim L2
ENSG00000060688 SNRNP40 -515417 sc-eQTL 7.12e-01 -0.039 0.105 0.274 NK_HLA L2
ENSG00000121753 ADGRB2 -983522 sc-eQTL 9.18e-01 0.00864 0.0838 0.274 NK_HLA L2
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 7.28e-01 -0.0328 0.0942 0.274 NK_HLA L2
ENSG00000134644 PUM1 -284620 sc-eQTL 8.46e-01 -0.0179 0.0918 0.274 NK_HLA L2
ENSG00000162511 LAPTM5 23597 sc-eQTL 1.54e-03 0.274 0.0854 0.274 NK_HLA L2
ENSG00000162517 PEF1 -863525 sc-eQTL 8.41e-01 0.0199 0.0987 0.274 NK_HLA L2
ENSG00000186056 MATN1-AS1 62867 sc-eQTL 9.83e-01 0.00194 0.0932 0.274 NK_HLA L2
ENSG00000287510 AL137857.1 49678 sc-eQTL 4.42e-01 0.0693 0.09 0.274 NK_HLA L2
ENSG00000060688 SNRNP40 -515417 sc-eQTL 9.69e-01 0.00372 0.0955 0.28 NK_cytokine L2
ENSG00000121753 ADGRB2 -983522 sc-eQTL 8.62e-01 0.0151 0.0863 0.28 NK_cytokine L2
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 2.53e-01 -0.0851 0.0743 0.28 NK_cytokine L2
ENSG00000134644 PUM1 -284620 sc-eQTL 3.28e-01 -0.0789 0.0804 0.28 NK_cytokine L2
ENSG00000162511 LAPTM5 23597 sc-eQTL 1.56e-04 0.33 0.0858 0.28 NK_cytokine L2
ENSG00000162517 PEF1 -863525 sc-eQTL 1.22e-01 0.117 0.0752 0.28 NK_cytokine L2
ENSG00000186056 MATN1-AS1 62867 sc-eQTL 2.22e-01 0.115 0.0937 0.28 NK_cytokine L2
ENSG00000287510 AL137857.1 49678 sc-eQTL 4.33e-01 0.0687 0.0874 0.28 NK_cytokine L2
ENSG00000060688 SNRNP40 -515417 sc-eQTL 3.37e-01 -0.117 0.121 0.248 PB L2
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 6.85e-01 -0.0574 0.141 0.248 PB L2
ENSG00000134644 PUM1 -284620 sc-eQTL 6.37e-02 0.226 0.121 0.248 PB L2
ENSG00000162510 MATN1 57786 sc-eQTL 9.14e-01 0.0124 0.114 0.248 PB L2
ENSG00000162511 LAPTM5 23597 sc-eQTL 1.59e-01 0.115 0.081 0.248 PB L2
ENSG00000162517 PEF1 -863525 sc-eQTL 9.12e-01 0.0139 0.126 0.248 PB L2
ENSG00000186056 MATN1-AS1 62867 sc-eQTL 4.73e-01 -0.0805 0.112 0.248 PB L2
ENSG00000287510 AL137857.1 49678 sc-eQTL 8.85e-01 -0.0173 0.119 0.248 PB L2
ENSG00000060688 SNRNP40 -515417 sc-eQTL 3.83e-01 0.0661 0.0756 0.283 Pro_T L2
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 6.41e-02 -0.177 0.0953 0.283 Pro_T L2
ENSG00000134644 PUM1 -284620 sc-eQTL 1.53e-01 0.128 0.0892 0.283 Pro_T L2
ENSG00000162511 LAPTM5 23597 sc-eQTL 9.69e-02 0.107 0.0639 0.283 Pro_T L2
ENSG00000162517 PEF1 -863525 sc-eQTL 9.94e-01 -0.000697 0.0944 0.283 Pro_T L2
ENSG00000186056 MATN1-AS1 62867 sc-eQTL 5.61e-01 0.0523 0.0898 0.283 Pro_T L2
ENSG00000287510 AL137857.1 49678 sc-eQTL 9.54e-01 -0.00482 0.0827 0.283 Pro_T L2
ENSG00000060688 SNRNP40 -515417 sc-eQTL 1.87e-01 0.131 0.0992 0.282 Treg L2
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 8.69e-01 0.0159 0.0964 0.282 Treg L2
ENSG00000134644 PUM1 -284620 sc-eQTL 7.25e-01 -0.0271 0.0771 0.282 Treg L2
ENSG00000162511 LAPTM5 23597 sc-eQTL 9.16e-01 0.00928 0.0883 0.282 Treg L2
ENSG00000162517 PEF1 -863525 sc-eQTL 8.34e-01 0.02 0.0954 0.282 Treg L2
ENSG00000186056 MATN1-AS1 62867 sc-eQTL 6.10e-01 0.046 0.0899 0.282 Treg L2
ENSG00000287510 AL137857.1 49678 sc-eQTL 2.19e-01 0.11 0.0896 0.282 Treg L2
ENSG00000060688 SNRNP40 -515417 sc-eQTL 6.00e-01 -0.0525 0.1 0.288 cDC L2
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 3.55e-01 -0.1 0.108 0.288 cDC L2
ENSG00000134644 PUM1 -284620 sc-eQTL 5.38e-01 0.0574 0.093 0.288 cDC L2
ENSG00000162511 LAPTM5 23597 sc-eQTL 2.92e-01 0.0688 0.065 0.288 cDC L2
ENSG00000162517 PEF1 -863525 sc-eQTL 6.76e-01 0.0395 0.0944 0.288 cDC L2
ENSG00000168528 SERINC2 -628194 sc-eQTL 4.34e-01 0.0655 0.0836 0.288 cDC L2
ENSG00000284543 LINC01226 -724855 sc-eQTL 5.15e-01 0.0536 0.0822 0.288 cDC L2
ENSG00000287510 AL137857.1 49678 sc-eQTL 2.33e-02 -0.2 0.0874 0.288 cDC L2
ENSG00000060688 SNRNP40 -515417 sc-eQTL 3.78e-01 0.0708 0.0802 0.282 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 5.95e-01 0.0477 0.0896 0.282 cMono_IL1B L2
ENSG00000134644 PUM1 -284620 sc-eQTL 8.47e-02 -0.104 0.0603 0.282 cMono_IL1B L2
ENSG00000162511 LAPTM5 23597 sc-eQTL 8.89e-01 0.00743 0.0533 0.282 cMono_IL1B L2
ENSG00000162512 SDC3 -127387 sc-eQTL 4.58e-01 -0.0745 0.1 0.282 cMono_IL1B L2
ENSG00000162517 PEF1 -863525 sc-eQTL 8.67e-01 0.0137 0.082 0.282 cMono_IL1B L2
ENSG00000168528 SERINC2 -628194 sc-eQTL 6.63e-01 0.0443 0.102 0.282 cMono_IL1B L2
ENSG00000284543 LINC01226 -724855 sc-eQTL 7.43e-02 0.16 0.0891 0.282 cMono_IL1B L2
ENSG00000287510 AL137857.1 49678 sc-eQTL 7.89e-02 0.147 0.0831 0.282 cMono_IL1B L2
ENSG00000060688 SNRNP40 -515417 sc-eQTL 4.76e-01 0.0603 0.0844 0.282 cMono_S100A L2
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 6.43e-01 -0.0463 0.0998 0.282 cMono_S100A L2
ENSG00000134644 PUM1 -284620 sc-eQTL 8.76e-01 0.0113 0.0722 0.282 cMono_S100A L2
ENSG00000162511 LAPTM5 23597 sc-eQTL 1.57e-01 -0.0783 0.0552 0.282 cMono_S100A L2
ENSG00000162512 SDC3 -127387 sc-eQTL 5.09e-01 -0.0633 0.0957 0.282 cMono_S100A L2
ENSG00000162517 PEF1 -863525 sc-eQTL 2.92e-01 -0.0912 0.0863 0.282 cMono_S100A L2
ENSG00000168528 SERINC2 -628194 sc-eQTL 8.30e-01 -0.0218 0.101 0.282 cMono_S100A L2
ENSG00000284543 LINC01226 -724855 sc-eQTL 4.19e-01 0.0666 0.0823 0.282 cMono_S100A L2
ENSG00000287510 AL137857.1 49678 sc-eQTL 5.93e-01 0.0443 0.0827 0.282 cMono_S100A L2
ENSG00000060688 SNRNP40 -515417 sc-eQTL 4.08e-01 0.101 0.122 0.3 gdT L2
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 7.82e-01 0.0291 0.105 0.3 gdT L2
ENSG00000134644 PUM1 -284620 sc-eQTL 2.10e-01 -0.136 0.108 0.3 gdT L2
ENSG00000162511 LAPTM5 23597 sc-eQTL 1.20e-01 0.183 0.117 0.3 gdT L2
ENSG00000162517 PEF1 -863525 sc-eQTL 8.37e-01 -0.0223 0.108 0.3 gdT L2
ENSG00000186056 MATN1-AS1 62867 sc-eQTL 5.40e-01 -0.0667 0.109 0.3 gdT L2
ENSG00000287510 AL137857.1 49678 sc-eQTL 2.26e-01 0.128 0.105 0.3 gdT L2
ENSG00000060688 SNRNP40 -515417 sc-eQTL 2.82e-01 0.1 0.0927 0.287 intMono L2
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 3.53e-01 0.0927 0.0997 0.287 intMono L2
ENSG00000134644 PUM1 -284620 sc-eQTL 8.46e-01 -0.0165 0.0848 0.287 intMono L2
ENSG00000162511 LAPTM5 23597 sc-eQTL 5.51e-01 0.0397 0.0665 0.287 intMono L2
ENSG00000162512 SDC3 -127387 sc-eQTL 1.53e-01 -0.13 0.0906 0.287 intMono L2
ENSG00000162517 PEF1 -863525 sc-eQTL 4.11e-01 -0.0786 0.0955 0.287 intMono L2
ENSG00000168528 SERINC2 -628194 sc-eQTL 8.66e-01 0.0161 0.0953 0.287 intMono L2
ENSG00000284543 LINC01226 -724855 sc-eQTL 3.56e-01 0.0834 0.0902 0.287 intMono L2
ENSG00000287510 AL137857.1 49678 sc-eQTL 7.88e-01 0.0244 0.0904 0.287 intMono L2
ENSG00000060688 SNRNP40 -515417 sc-eQTL 9.66e-02 0.145 0.087 0.278 ncMono L2
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 8.67e-01 0.0157 0.0934 0.278 ncMono L2
ENSG00000134644 PUM1 -284620 sc-eQTL 8.41e-02 -0.132 0.0758 0.278 ncMono L2
ENSG00000162511 LAPTM5 23597 sc-eQTL 8.96e-01 -0.00909 0.0693 0.278 ncMono L2
ENSG00000162512 SDC3 -127387 sc-eQTL 7.22e-01 -0.0277 0.0777 0.278 ncMono L2
ENSG00000162517 PEF1 -863525 sc-eQTL 5.83e-01 -0.049 0.0891 0.278 ncMono L2
ENSG00000168528 SERINC2 -628194 sc-eQTL 3.53e-01 0.0789 0.0847 0.278 ncMono L2
ENSG00000284543 LINC01226 -724855 sc-eQTL 7.48e-01 -0.0272 0.0847 0.278 ncMono L2
ENSG00000287510 AL137857.1 49678 sc-eQTL 2.12e-01 -0.11 0.0875 0.278 ncMono L2
ENSG00000060688 SNRNP40 -515417 sc-eQTL 3.54e-01 -0.0895 0.0963 0.305 pDC L2
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 8.46e-02 0.182 0.105 0.305 pDC L2
ENSG00000134644 PUM1 -284620 sc-eQTL 1.84e-01 0.117 0.0873 0.305 pDC L2
ENSG00000162511 LAPTM5 23597 sc-eQTL 1.06e-01 0.132 0.081 0.305 pDC L2
ENSG00000162517 PEF1 -863525 sc-eQTL 9.90e-01 -0.0013 0.106 0.305 pDC L2
ENSG00000168528 SERINC2 -628194 sc-eQTL 9.34e-01 -0.00826 0.099 0.305 pDC L2
ENSG00000284543 LINC01226 -724855 sc-eQTL 5.02e-01 -0.0517 0.0768 0.305 pDC L2
ENSG00000287510 AL137857.1 49678 sc-eQTL 8.69e-01 -0.0149 0.0904 0.305 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -515417 sc-eQTL 1.05e-01 0.161 0.0988 0.282 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 7.29e-01 0.0287 0.0827 0.282 B_Memory LOneK1K
ENSG00000134644 PUM1 -284620 sc-eQTL 3.06e-01 -0.0751 0.0731 0.282 B_Memory LOneK1K
ENSG00000162510 MATN1 57786 sc-eQTL 1.28e-01 -0.127 0.0831 0.282 B_Memory LOneK1K
ENSG00000162511 LAPTM5 23597 sc-eQTL 1.57e-03 -0.164 0.0513 0.282 B_Memory LOneK1K
ENSG00000162517 PEF1 -863525 sc-eQTL 9.25e-01 -0.00821 0.087 0.282 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 62867 sc-eQTL 3.01e-01 -0.0718 0.0693 0.282 B_Memory LOneK1K
ENSG00000287510 AL137857.1 49678 sc-eQTL 1.29e-01 -0.115 0.0753 0.282 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -515417 sc-eQTL 5.32e-01 0.057 0.0911 0.282 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 5.92e-01 -0.0387 0.072 0.282 B_Naive LOneK1K
ENSG00000134644 PUM1 -284620 sc-eQTL 4.53e-01 0.0512 0.0681 0.282 B_Naive LOneK1K
ENSG00000162510 MATN1 57786 sc-eQTL 1.08e-02 -0.166 0.0647 0.282 B_Naive LOneK1K
ENSG00000162511 LAPTM5 23597 sc-eQTL 9.19e-02 -0.0777 0.0459 0.282 B_Naive LOneK1K
ENSG00000162517 PEF1 -863525 sc-eQTL 8.37e-01 0.0173 0.0844 0.282 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 62867 sc-eQTL 1.62e-05 -0.252 0.0571 0.282 B_Naive LOneK1K
ENSG00000287510 AL137857.1 49678 sc-eQTL 9.46e-01 0.00482 0.0709 0.282 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -515417 sc-eQTL 4.17e-01 0.0623 0.0765 0.282 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 9.45e-01 0.00595 0.0868 0.282 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -284620 sc-eQTL 1.88e-01 -0.0729 0.0552 0.282 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 23597 sc-eQTL 6.38e-01 -0.023 0.0487 0.282 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -127387 sc-eQTL 2.79e-01 -0.108 0.099 0.282 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -863525 sc-eQTL 5.01e-01 -0.047 0.0698 0.282 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -628194 sc-eQTL 8.26e-01 0.0224 0.102 0.282 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -724855 sc-eQTL 3.97e-02 0.172 0.0829 0.282 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 49678 sc-eQTL 8.75e-02 0.134 0.0779 0.282 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -515417 sc-eQTL 1.21e-01 0.129 0.0829 0.282 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 7.47e-01 0.0295 0.0912 0.282 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -284620 sc-eQTL 4.46e-01 -0.057 0.0747 0.282 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 23597 sc-eQTL 9.85e-01 -0.00112 0.0598 0.282 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -127387 sc-eQTL 3.09e-01 -0.0888 0.0871 0.282 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -863525 sc-eQTL 4.80e-01 -0.0561 0.0793 0.282 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -628194 sc-eQTL 9.25e-01 0.00858 0.0906 0.282 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -724855 sc-eQTL 1.86e-01 0.114 0.0856 0.282 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 49678 sc-eQTL 7.51e-01 -0.0273 0.0861 0.282 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -515417 sc-eQTL 6.68e-01 -0.0401 0.0936 0.28 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -983522 sc-eQTL 4.62e-01 0.0587 0.0796 0.28 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -515611 sc-eQTL 9.95e-01 0.000401 0.064 0.28 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -284620 sc-eQTL 4.58e-01 -0.052 0.07 0.28 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 23597 sc-eQTL 1.04e-03 0.254 0.0763 0.28 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -863525 sc-eQTL 1.72e-01 0.0812 0.0592 0.28 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 62867 sc-eQTL 4.60e-01 -0.0668 0.0902 0.28 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 49678 sc-eQTL 1.75e-01 0.106 0.0776 0.28 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000060688 SNRNP40 -515417 eQTL 0.045 -0.0369 0.0184 0.00126 0.0 0.282
ENSG00000162511 LAPTM5 23597 eQTL 2.2800000000000001e-26 0.113 0.0103 0.0 0.0 0.282
ENSG00000162512 SDC3 -127387 eQTL 0.0276 -0.0591 0.0268 0.0 0.0 0.282
ENSG00000186056 MATN1-AS1 62867 eQTL 2.68e-04 -0.0499 0.0136 0.00298 0.0 0.282

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000134644 \N -284620 9.83e-07 5.67e-07 6.45e-08 3.96e-07 1.05e-07 1.57e-07 6.02e-07 8.37e-08 2.78e-07 1.46e-07 8.15e-07 2.04e-07 7.02e-07 1.07e-07 1.45e-07 1.14e-07 8.74e-08 3.3e-07 1.13e-07 7.84e-08 1.39e-07 2.96e-07 3.11e-07 1.06e-07 6.65e-07 1.86e-07 1.85e-07 1.7e-07 2.66e-07 3.52e-07 2.19e-07 5.08e-08 5.17e-08 1.02e-07 2.85e-07 3.57e-08 6.57e-08 8.25e-08 6.08e-08 8.34e-08 3.2e-08 4.55e-07 3.2e-08 1.99e-08 4.36e-08 8.24e-09 7.52e-08 2.05e-09 4.94e-08
ENSG00000162511 LAPTM5 23597 1.4e-05 1.26e-05 1.67e-06 7.18e-06 2.39e-06 5.69e-06 1.59e-05 2.23e-06 1.15e-05 6.2e-06 1.61e-05 6.11e-06 2.01e-05 3.66e-06 3.5e-06 6.68e-06 5.65e-06 9.38e-06 2.93e-06 2.79e-06 6.18e-06 1.11e-05 1.02e-05 3.38e-06 1.85e-05 4.56e-06 6.39e-06 4.64e-06 1.35e-05 1.02e-05 7.65e-06 1.05e-06 1.29e-06 3.29e-06 5.03e-06 2.66e-06 1.74e-06 1.98e-06 2.23e-06 1.1e-06 9.79e-07 1.41e-05 1.57e-06 1.73e-07 7.68e-07 1.81e-06 1.74e-06 7.32e-07 4.84e-07