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Genes within 1Mb (chr1:30775144:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -521644 sc-eQTL 6.52e-01 -0.0451 0.0999 0.816 B L1
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 8.73e-01 0.0128 0.08 0.816 B L1
ENSG00000134644 PUM1 -290847 sc-eQTL 6.85e-01 -0.0272 0.0671 0.816 B L1
ENSG00000162510 MATN1 51559 sc-eQTL 9.67e-01 0.00291 0.0706 0.816 B L1
ENSG00000162511 LAPTM5 17370 sc-eQTL 9.82e-01 -0.00126 0.0553 0.816 B L1
ENSG00000162517 PEF1 -869752 sc-eQTL 3.25e-01 -0.0821 0.0833 0.816 B L1
ENSG00000186056 MATN1-AS1 56640 sc-eQTL 4.28e-02 -0.131 0.0642 0.816 B L1
ENSG00000287510 AL137857.1 43451 sc-eQTL 2.53e-02 -0.171 0.0758 0.816 B L1
ENSG00000060688 SNRNP40 -521644 sc-eQTL 4.26e-01 -0.0702 0.088 0.816 CD4T L1
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 7.01e-01 0.0264 0.0688 0.816 CD4T L1
ENSG00000134644 PUM1 -290847 sc-eQTL 5.13e-01 0.0401 0.0613 0.816 CD4T L1
ENSG00000162511 LAPTM5 17370 sc-eQTL 6.12e-01 -0.0345 0.0679 0.816 CD4T L1
ENSG00000162517 PEF1 -869752 sc-eQTL 2.96e-01 -0.0742 0.0709 0.816 CD4T L1
ENSG00000186056 MATN1-AS1 56640 sc-eQTL 3.83e-01 -0.0531 0.0607 0.816 CD4T L1
ENSG00000287510 AL137857.1 43451 sc-eQTL 2.77e-01 0.0791 0.0726 0.816 CD4T L1
ENSG00000060688 SNRNP40 -521644 sc-eQTL 4.35e-01 -0.0898 0.115 0.816 CD8T L1
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 6.85e-01 0.031 0.0765 0.816 CD8T L1
ENSG00000134644 PUM1 -290847 sc-eQTL 7.64e-01 -0.0203 0.0674 0.816 CD8T L1
ENSG00000162511 LAPTM5 17370 sc-eQTL 2.09e-01 0.0821 0.0652 0.816 CD8T L1
ENSG00000162517 PEF1 -869752 sc-eQTL 3.96e-01 -0.0684 0.0805 0.816 CD8T L1
ENSG00000186056 MATN1-AS1 56640 sc-eQTL 1.00e-01 -0.126 0.0762 0.816 CD8T L1
ENSG00000287510 AL137857.1 43451 sc-eQTL 4.40e-01 -0.0744 0.0962 0.816 CD8T L1
ENSG00000060688 SNRNP40 -521644 sc-eQTL 9.84e-01 0.00209 0.104 0.82 DC L1
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 1.55e-01 -0.175 0.122 0.82 DC L1
ENSG00000134644 PUM1 -290847 sc-eQTL 5.14e-01 -0.0629 0.0963 0.82 DC L1
ENSG00000162511 LAPTM5 17370 sc-eQTL 4.98e-01 0.0467 0.0688 0.82 DC L1
ENSG00000162517 PEF1 -869752 sc-eQTL 4.91e-01 0.0769 0.111 0.82 DC L1
ENSG00000168528 SERINC2 -634421 sc-eQTL 3.01e-01 0.117 0.113 0.82 DC L1
ENSG00000284543 LINC01226 -731082 sc-eQTL 7.57e-01 0.0233 0.0752 0.82 DC L1
ENSG00000287510 AL137857.1 43451 sc-eQTL 3.77e-01 -0.0963 0.109 0.82 DC L1
ENSG00000060688 SNRNP40 -521644 sc-eQTL 5.03e-01 0.052 0.0775 0.816 Mono L1
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 6.37e-01 0.0454 0.0961 0.816 Mono L1
ENSG00000134644 PUM1 -290847 sc-eQTL 1.33e-01 -0.0924 0.0613 0.816 Mono L1
ENSG00000162511 LAPTM5 17370 sc-eQTL 7.45e-01 0.0184 0.0567 0.816 Mono L1
ENSG00000162512 SDC3 -133614 sc-eQTL 4.41e-01 -0.084 0.109 0.816 Mono L1
ENSG00000162517 PEF1 -869752 sc-eQTL 4.98e-01 -0.0518 0.0764 0.816 Mono L1
ENSG00000168528 SERINC2 -634421 sc-eQTL 9.41e-01 -0.00863 0.117 0.816 Mono L1
ENSG00000284543 LINC01226 -731082 sc-eQTL 7.71e-01 0.0301 0.103 0.816 Mono L1
ENSG00000287510 AL137857.1 43451 sc-eQTL 9.20e-01 0.00911 0.0901 0.816 Mono L1
ENSG00000060688 SNRNP40 -521644 sc-eQTL 3.06e-01 -0.113 0.11 0.815 NK L1
ENSG00000121753 ADGRB2 -989749 sc-eQTL 5.21e-01 0.0609 0.0946 0.815 NK L1
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 1.54e-01 -0.107 0.0749 0.815 NK L1
ENSG00000134644 PUM1 -290847 sc-eQTL 3.47e-01 -0.0743 0.0788 0.815 NK L1
ENSG00000162511 LAPTM5 17370 sc-eQTL 9.05e-05 0.35 0.0876 0.815 NK L1
ENSG00000162517 PEF1 -869752 sc-eQTL 7.30e-02 0.119 0.0658 0.815 NK L1
ENSG00000186056 MATN1-AS1 56640 sc-eQTL 9.14e-01 0.011 0.102 0.815 NK L1
ENSG00000287510 AL137857.1 43451 sc-eQTL 4.62e-01 0.0694 0.0942 0.815 NK L1
ENSG00000060688 SNRNP40 -521644 sc-eQTL 7.02e-01 0.0322 0.0839 0.816 Other_T L1
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 5.08e-01 0.0594 0.0896 0.816 Other_T L1
ENSG00000134644 PUM1 -290847 sc-eQTL 4.95e-01 0.055 0.0806 0.816 Other_T L1
ENSG00000162511 LAPTM5 17370 sc-eQTL 4.93e-01 -0.0453 0.066 0.816 Other_T L1
ENSG00000162517 PEF1 -869752 sc-eQTL 1.18e-01 0.138 0.0878 0.816 Other_T L1
ENSG00000186056 MATN1-AS1 56640 sc-eQTL 4.34e-03 -0.306 0.106 0.816 Other_T L1
ENSG00000287510 AL137857.1 43451 sc-eQTL 9.93e-01 -0.00103 0.113 0.816 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -521644 sc-eQTL 6.70e-01 0.0538 0.126 0.811 B_Activated L2
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 7.72e-01 -0.0369 0.127 0.811 B_Activated L2
ENSG00000134644 PUM1 -290847 sc-eQTL 1.82e-01 -0.158 0.118 0.811 B_Activated L2
ENSG00000162510 MATN1 51559 sc-eQTL 2.11e-01 -0.129 0.103 0.811 B_Activated L2
ENSG00000162511 LAPTM5 17370 sc-eQTL 4.72e-02 -0.142 0.0713 0.811 B_Activated L2
ENSG00000162517 PEF1 -869752 sc-eQTL 3.85e-01 -0.107 0.122 0.811 B_Activated L2
ENSG00000186056 MATN1-AS1 56640 sc-eQTL 1.50e-01 -0.167 0.116 0.811 B_Activated L2
ENSG00000287510 AL137857.1 43451 sc-eQTL 1.88e-01 -0.135 0.102 0.811 B_Activated L2
ENSG00000060688 SNRNP40 -521644 sc-eQTL 9.50e-01 0.00759 0.121 0.818 B_Intermediate L2
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 6.34e-01 -0.0481 0.101 0.818 B_Intermediate L2
ENSG00000134644 PUM1 -290847 sc-eQTL 1.87e-02 -0.223 0.0941 0.818 B_Intermediate L2
ENSG00000162510 MATN1 51559 sc-eQTL 2.63e-01 -0.111 0.0989 0.818 B_Intermediate L2
ENSG00000162511 LAPTM5 17370 sc-eQTL 3.06e-02 -0.131 0.0602 0.818 B_Intermediate L2
ENSG00000162517 PEF1 -869752 sc-eQTL 7.20e-01 -0.0406 0.113 0.818 B_Intermediate L2
ENSG00000186056 MATN1-AS1 56640 sc-eQTL 6.70e-01 0.0365 0.0854 0.818 B_Intermediate L2
ENSG00000287510 AL137857.1 43451 sc-eQTL 3.86e-01 -0.083 0.0954 0.818 B_Intermediate L2
ENSG00000060688 SNRNP40 -521644 sc-eQTL 5.23e-01 0.0753 0.118 0.815 B_Memory L2
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 3.23e-01 0.107 0.108 0.815 B_Memory L2
ENSG00000134644 PUM1 -290847 sc-eQTL 7.58e-01 -0.0291 0.0944 0.815 B_Memory L2
ENSG00000162510 MATN1 51559 sc-eQTL 4.60e-01 -0.0667 0.0902 0.815 B_Memory L2
ENSG00000162511 LAPTM5 17370 sc-eQTL 2.83e-01 -0.086 0.0798 0.815 B_Memory L2
ENSG00000162517 PEF1 -869752 sc-eQTL 6.13e-02 -0.199 0.106 0.815 B_Memory L2
ENSG00000186056 MATN1-AS1 56640 sc-eQTL 7.96e-01 -0.0237 0.0916 0.815 B_Memory L2
ENSG00000287510 AL137857.1 43451 sc-eQTL 9.89e-01 0.00144 0.107 0.815 B_Memory L2
ENSG00000060688 SNRNP40 -521644 sc-eQTL 5.16e-01 0.0708 0.109 0.816 B_Naive1 L2
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 6.15e-01 0.0472 0.0939 0.816 B_Naive1 L2
ENSG00000134644 PUM1 -290847 sc-eQTL 5.43e-01 0.0505 0.0828 0.816 B_Naive1 L2
ENSG00000162510 MATN1 51559 sc-eQTL 3.91e-01 0.0721 0.0839 0.816 B_Naive1 L2
ENSG00000162511 LAPTM5 17370 sc-eQTL 8.54e-01 0.0104 0.0562 0.816 B_Naive1 L2
ENSG00000162517 PEF1 -869752 sc-eQTL 8.63e-01 0.0171 0.099 0.816 B_Naive1 L2
ENSG00000186056 MATN1-AS1 56640 sc-eQTL 1.16e-01 -0.116 0.0733 0.816 B_Naive1 L2
ENSG00000287510 AL137857.1 43451 sc-eQTL 3.44e-02 -0.192 0.0901 0.816 B_Naive1 L2
ENSG00000060688 SNRNP40 -521644 sc-eQTL 1.71e-01 -0.157 0.114 0.815 B_Naive2 L2
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 4.10e-01 -0.0781 0.0946 0.815 B_Naive2 L2
ENSG00000134644 PUM1 -290847 sc-eQTL 6.47e-01 -0.0425 0.0927 0.815 B_Naive2 L2
ENSG00000162510 MATN1 51559 sc-eQTL 9.08e-01 -0.0103 0.0891 0.815 B_Naive2 L2
ENSG00000162511 LAPTM5 17370 sc-eQTL 5.49e-01 -0.0363 0.0604 0.815 B_Naive2 L2
ENSG00000162517 PEF1 -869752 sc-eQTL 7.97e-01 -0.0283 0.11 0.815 B_Naive2 L2
ENSG00000186056 MATN1-AS1 56640 sc-eQTL 5.23e-02 -0.17 0.0873 0.815 B_Naive2 L2
ENSG00000287510 AL137857.1 43451 sc-eQTL 3.34e-01 -0.0918 0.0949 0.815 B_Naive2 L2
ENSG00000060688 SNRNP40 -521644 sc-eQTL 1.69e-01 -0.159 0.115 0.811 CD4_CTL L2
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 6.27e-01 0.0553 0.114 0.811 CD4_CTL L2
ENSG00000134644 PUM1 -290847 sc-eQTL 1.66e-02 -0.266 0.11 0.811 CD4_CTL L2
ENSG00000162511 LAPTM5 17370 sc-eQTL 3.79e-01 0.0876 0.0993 0.811 CD4_CTL L2
ENSG00000162517 PEF1 -869752 sc-eQTL 3.93e-01 -0.0871 0.102 0.811 CD4_CTL L2
ENSG00000186056 MATN1-AS1 56640 sc-eQTL 9.11e-01 0.0122 0.109 0.811 CD4_CTL L2
ENSG00000287510 AL137857.1 43451 sc-eQTL 3.45e-01 0.0907 0.0958 0.811 CD4_CTL L2
ENSG00000060688 SNRNP40 -521644 sc-eQTL 4.22e-01 -0.0744 0.0925 0.816 CD4_Naive L2
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 4.19e-01 0.0664 0.082 0.816 CD4_Naive L2
ENSG00000134644 PUM1 -290847 sc-eQTL 9.00e-01 0.00828 0.0656 0.816 CD4_Naive L2
ENSG00000162511 LAPTM5 17370 sc-eQTL 2.52e-01 -0.0804 0.07 0.816 CD4_Naive L2
ENSG00000162517 PEF1 -869752 sc-eQTL 9.31e-02 -0.129 0.0765 0.816 CD4_Naive L2
ENSG00000186056 MATN1-AS1 56640 sc-eQTL 3.10e-01 -0.0724 0.0711 0.816 CD4_Naive L2
ENSG00000287510 AL137857.1 43451 sc-eQTL 2.43e-01 0.0955 0.0816 0.816 CD4_Naive L2
ENSG00000060688 SNRNP40 -521644 sc-eQTL 7.65e-01 0.0348 0.116 0.816 CD4_TCM L2
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 8.67e-01 0.0157 0.0937 0.816 CD4_TCM L2
ENSG00000134644 PUM1 -290847 sc-eQTL 5.82e-02 0.157 0.0823 0.816 CD4_TCM L2
ENSG00000162511 LAPTM5 17370 sc-eQTL 7.73e-01 0.0199 0.0688 0.816 CD4_TCM L2
ENSG00000162517 PEF1 -869752 sc-eQTL 5.24e-01 -0.0589 0.0922 0.816 CD4_TCM L2
ENSG00000186056 MATN1-AS1 56640 sc-eQTL 6.42e-01 0.0406 0.0873 0.816 CD4_TCM L2
ENSG00000287510 AL137857.1 43451 sc-eQTL 3.39e-01 -0.093 0.0971 0.816 CD4_TCM L2
ENSG00000060688 SNRNP40 -521644 sc-eQTL 3.06e-01 0.117 0.114 0.816 CD4_TEM L2
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 6.00e-01 -0.0573 0.109 0.816 CD4_TEM L2
ENSG00000134644 PUM1 -290847 sc-eQTL 7.82e-01 -0.0252 0.0908 0.816 CD4_TEM L2
ENSG00000162511 LAPTM5 17370 sc-eQTL 8.80e-01 0.0138 0.0918 0.816 CD4_TEM L2
ENSG00000162517 PEF1 -869752 sc-eQTL 6.82e-01 0.0422 0.103 0.816 CD4_TEM L2
ENSG00000186056 MATN1-AS1 56640 sc-eQTL 5.38e-01 -0.0662 0.107 0.816 CD4_TEM L2
ENSG00000287510 AL137857.1 43451 sc-eQTL 9.21e-02 0.178 0.105 0.816 CD4_TEM L2
ENSG00000060688 SNRNP40 -521644 sc-eQTL 3.47e-01 -0.117 0.124 0.816 CD8_CTL L2
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 8.30e-01 0.0205 0.0953 0.816 CD8_CTL L2
ENSG00000134644 PUM1 -290847 sc-eQTL 6.19e-01 0.046 0.0925 0.816 CD8_CTL L2
ENSG00000162511 LAPTM5 17370 sc-eQTL 3.26e-02 0.218 0.101 0.816 CD8_CTL L2
ENSG00000162517 PEF1 -869752 sc-eQTL 8.20e-01 -0.0203 0.0892 0.816 CD8_CTL L2
ENSG00000186056 MATN1-AS1 56640 sc-eQTL 7.77e-01 -0.0305 0.108 0.816 CD8_CTL L2
ENSG00000287510 AL137857.1 43451 sc-eQTL 6.78e-01 0.0421 0.101 0.816 CD8_CTL L2
ENSG00000060688 SNRNP40 -521644 sc-eQTL 4.21e-01 -0.092 0.114 0.816 CD8_Naive L2
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 8.43e-01 -0.0195 0.0984 0.816 CD8_Naive L2
ENSG00000134644 PUM1 -290847 sc-eQTL 2.49e-01 -0.0913 0.079 0.816 CD8_Naive L2
ENSG00000162511 LAPTM5 17370 sc-eQTL 2.57e-01 -0.0861 0.0757 0.816 CD8_Naive L2
ENSG00000162517 PEF1 -869752 sc-eQTL 3.75e-01 -0.0936 0.105 0.816 CD8_Naive L2
ENSG00000186056 MATN1-AS1 56640 sc-eQTL 1.91e-01 -0.124 0.0944 0.816 CD8_Naive L2
ENSG00000287510 AL137857.1 43451 sc-eQTL 3.53e-01 -0.0959 0.103 0.816 CD8_Naive L2
ENSG00000060688 SNRNP40 -521644 sc-eQTL 8.87e-01 0.0182 0.128 0.815 CD8_TCM L2
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 2.59e-02 -0.259 0.115 0.815 CD8_TCM L2
ENSG00000134644 PUM1 -290847 sc-eQTL 1.56e-01 0.156 0.109 0.815 CD8_TCM L2
ENSG00000162511 LAPTM5 17370 sc-eQTL 9.29e-01 0.0103 0.115 0.815 CD8_TCM L2
ENSG00000162517 PEF1 -869752 sc-eQTL 7.41e-01 -0.0389 0.118 0.815 CD8_TCM L2
ENSG00000186056 MATN1-AS1 56640 sc-eQTL 7.57e-01 0.033 0.106 0.815 CD8_TCM L2
ENSG00000287510 AL137857.1 43451 sc-eQTL 3.24e-01 0.106 0.107 0.815 CD8_TCM L2
ENSG00000060688 SNRNP40 -521644 sc-eQTL 6.59e-01 -0.0531 0.12 0.815 CD8_TEM L2
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 7.48e-01 0.0371 0.115 0.815 CD8_TEM L2
ENSG00000134644 PUM1 -290847 sc-eQTL 2.05e-01 0.149 0.117 0.815 CD8_TEM L2
ENSG00000162511 LAPTM5 17370 sc-eQTL 5.45e-01 -0.0672 0.111 0.815 CD8_TEM L2
ENSG00000162517 PEF1 -869752 sc-eQTL 7.85e-01 0.0285 0.104 0.815 CD8_TEM L2
ENSG00000186056 MATN1-AS1 56640 sc-eQTL 7.40e-02 -0.205 0.114 0.815 CD8_TEM L2
ENSG00000287510 AL137857.1 43451 sc-eQTL 5.40e-03 -0.287 0.102 0.815 CD8_TEM L2
ENSG00000060688 SNRNP40 -521644 sc-eQTL 6.64e-01 0.0518 0.119 0.814 MAIT L2
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 3.99e-01 0.089 0.105 0.814 MAIT L2
ENSG00000134644 PUM1 -290847 sc-eQTL 6.15e-01 0.051 0.101 0.814 MAIT L2
ENSG00000162511 LAPTM5 17370 sc-eQTL 4.62e-01 -0.0702 0.0953 0.814 MAIT L2
ENSG00000162517 PEF1 -869752 sc-eQTL 3.99e-01 0.0885 0.105 0.814 MAIT L2
ENSG00000186056 MATN1-AS1 56640 sc-eQTL 4.81e-02 -0.209 0.105 0.814 MAIT L2
ENSG00000287510 AL137857.1 43451 sc-eQTL 1.91e-01 0.143 0.109 0.814 MAIT L2
ENSG00000060688 SNRNP40 -521644 sc-eQTL 4.96e-01 0.0838 0.123 0.816 NK_CD56bright L2
ENSG00000121753 ADGRB2 -989749 sc-eQTL 9.54e-01 -0.00553 0.0962 0.816 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 1.04e-01 -0.168 0.103 0.816 NK_CD56bright L2
ENSG00000134644 PUM1 -290847 sc-eQTL 7.03e-01 0.0416 0.109 0.816 NK_CD56bright L2
ENSG00000162511 LAPTM5 17370 sc-eQTL 1.79e-03 0.332 0.105 0.816 NK_CD56bright L2
ENSG00000162517 PEF1 -869752 sc-eQTL 3.75e-01 0.0927 0.104 0.816 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 56640 sc-eQTL 5.23e-02 -0.209 0.107 0.816 NK_CD56bright L2
ENSG00000287510 AL137857.1 43451 sc-eQTL 7.91e-01 -0.0283 0.106 0.816 NK_CD56bright L2
ENSG00000060688 SNRNP40 -521644 sc-eQTL 7.48e-01 0.0372 0.115 0.815 NK_CD56dim L2
ENSG00000121753 ADGRB2 -989749 sc-eQTL 5.64e-01 0.0586 0.102 0.815 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 3.02e-01 -0.0882 0.0852 0.815 NK_CD56dim L2
ENSG00000134644 PUM1 -290847 sc-eQTL 9.24e-01 -0.0084 0.0876 0.815 NK_CD56dim L2
ENSG00000162511 LAPTM5 17370 sc-eQTL 3.20e-03 0.273 0.0915 0.815 NK_CD56dim L2
ENSG00000162517 PEF1 -869752 sc-eQTL 9.11e-01 0.00927 0.0831 0.815 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 56640 sc-eQTL 8.92e-01 -0.0159 0.117 0.815 NK_CD56dim L2
ENSG00000287510 AL137857.1 43451 sc-eQTL 5.46e-01 0.0583 0.0965 0.815 NK_CD56dim L2
ENSG00000060688 SNRNP40 -521644 sc-eQTL 8.93e-02 -0.21 0.123 0.815 NK_HLA L2
ENSG00000121753 ADGRB2 -989749 sc-eQTL 3.57e-01 0.0908 0.0982 0.815 NK_HLA L2
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 7.95e-01 0.0287 0.111 0.815 NK_HLA L2
ENSG00000134644 PUM1 -290847 sc-eQTL 2.51e-01 0.124 0.107 0.815 NK_HLA L2
ENSG00000162511 LAPTM5 17370 sc-eQTL 4.98e-03 0.287 0.101 0.815 NK_HLA L2
ENSG00000162517 PEF1 -869752 sc-eQTL 8.48e-01 -0.0223 0.116 0.815 NK_HLA L2
ENSG00000186056 MATN1-AS1 56640 sc-eQTL 4.39e-01 0.0848 0.109 0.815 NK_HLA L2
ENSG00000287510 AL137857.1 43451 sc-eQTL 5.15e-01 -0.069 0.106 0.815 NK_HLA L2
ENSG00000060688 SNRNP40 -521644 sc-eQTL 2.46e-01 -0.131 0.112 0.815 NK_cytokine L2
ENSG00000121753 ADGRB2 -989749 sc-eQTL 9.08e-01 -0.0117 0.102 0.815 NK_cytokine L2
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 1.33e-01 -0.132 0.0874 0.815 NK_cytokine L2
ENSG00000134644 PUM1 -290847 sc-eQTL 1.31e-01 -0.143 0.0945 0.815 NK_cytokine L2
ENSG00000162511 LAPTM5 17370 sc-eQTL 8.34e-03 0.274 0.103 0.815 NK_cytokine L2
ENSG00000162517 PEF1 -869752 sc-eQTL 1.46e-02 0.216 0.0879 0.815 NK_cytokine L2
ENSG00000186056 MATN1-AS1 56640 sc-eQTL 9.00e-01 0.0139 0.111 0.815 NK_cytokine L2
ENSG00000287510 AL137857.1 43451 sc-eQTL 9.39e-01 -0.00791 0.103 0.815 NK_cytokine L2
ENSG00000060688 SNRNP40 -521644 sc-eQTL 2.42e-01 -0.157 0.134 0.815 PB L2
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 9.77e-01 -0.0045 0.156 0.815 PB L2
ENSG00000134644 PUM1 -290847 sc-eQTL 2.52e-01 0.155 0.135 0.815 PB L2
ENSG00000162510 MATN1 51559 sc-eQTL 7.30e-01 -0.0438 0.126 0.815 PB L2
ENSG00000162511 LAPTM5 17370 sc-eQTL 2.18e-01 0.111 0.0897 0.815 PB L2
ENSG00000162517 PEF1 -869752 sc-eQTL 4.19e-01 0.112 0.139 0.815 PB L2
ENSG00000186056 MATN1-AS1 56640 sc-eQTL 5.97e-01 -0.0654 0.124 0.815 PB L2
ENSG00000287510 AL137857.1 43451 sc-eQTL 7.66e-01 0.0393 0.132 0.815 PB L2
ENSG00000060688 SNRNP40 -521644 sc-eQTL 7.74e-01 -0.0252 0.0875 0.813 Pro_T L2
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 8.96e-01 0.0146 0.111 0.813 Pro_T L2
ENSG00000134644 PUM1 -290847 sc-eQTL 5.22e-01 0.0664 0.104 0.813 Pro_T L2
ENSG00000162511 LAPTM5 17370 sc-eQTL 6.80e-01 0.0306 0.0743 0.813 Pro_T L2
ENSG00000162517 PEF1 -869752 sc-eQTL 3.50e-01 -0.102 0.109 0.813 Pro_T L2
ENSG00000186056 MATN1-AS1 56640 sc-eQTL 8.70e-01 -0.017 0.104 0.813 Pro_T L2
ENSG00000287510 AL137857.1 43451 sc-eQTL 5.10e-01 -0.063 0.0955 0.813 Pro_T L2
ENSG00000060688 SNRNP40 -521644 sc-eQTL 7.20e-02 -0.21 0.116 0.816 Treg L2
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 6.11e-01 0.0577 0.113 0.816 Treg L2
ENSG00000134644 PUM1 -290847 sc-eQTL 7.17e-01 0.0329 0.0906 0.816 Treg L2
ENSG00000162511 LAPTM5 17370 sc-eQTL 1.67e-01 0.143 0.103 0.816 Treg L2
ENSG00000162517 PEF1 -869752 sc-eQTL 7.50e-01 0.0357 0.112 0.816 Treg L2
ENSG00000186056 MATN1-AS1 56640 sc-eQTL 5.50e-01 0.0632 0.106 0.816 Treg L2
ENSG00000287510 AL137857.1 43451 sc-eQTL 7.40e-01 0.0351 0.106 0.816 Treg L2
ENSG00000060688 SNRNP40 -521644 sc-eQTL 5.58e-01 -0.0723 0.123 0.824 cDC L2
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 1.54e-01 -0.19 0.133 0.824 cDC L2
ENSG00000134644 PUM1 -290847 sc-eQTL 3.56e-01 -0.106 0.114 0.824 cDC L2
ENSG00000162511 LAPTM5 17370 sc-eQTL 4.91e-01 -0.0554 0.0802 0.824 cDC L2
ENSG00000162517 PEF1 -869752 sc-eQTL 6.50e-01 0.0528 0.116 0.824 cDC L2
ENSG00000168528 SERINC2 -634421 sc-eQTL 4.94e-01 0.0705 0.103 0.824 cDC L2
ENSG00000284543 LINC01226 -731082 sc-eQTL 3.52e-02 -0.212 0.1 0.824 cDC L2
ENSG00000287510 AL137857.1 43451 sc-eQTL 8.49e-01 0.0208 0.109 0.824 cDC L2
ENSG00000060688 SNRNP40 -521644 sc-eQTL 6.26e-01 0.0453 0.093 0.816 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 8.33e-01 0.0219 0.104 0.816 cMono_IL1B L2
ENSG00000134644 PUM1 -290847 sc-eQTL 2.54e-01 -0.08 0.07 0.816 cMono_IL1B L2
ENSG00000162511 LAPTM5 17370 sc-eQTL 5.39e-01 0.0379 0.0616 0.816 cMono_IL1B L2
ENSG00000162512 SDC3 -133614 sc-eQTL 1.82e-01 -0.155 0.116 0.816 cMono_IL1B L2
ENSG00000162517 PEF1 -869752 sc-eQTL 9.90e-01 0.00118 0.0949 0.816 cMono_IL1B L2
ENSG00000168528 SERINC2 -634421 sc-eQTL 8.48e-01 -0.0226 0.118 0.816 cMono_IL1B L2
ENSG00000284543 LINC01226 -731082 sc-eQTL 3.69e-01 0.0933 0.104 0.816 cMono_IL1B L2
ENSG00000287510 AL137857.1 43451 sc-eQTL 8.34e-01 -0.0204 0.0969 0.816 cMono_IL1B L2
ENSG00000060688 SNRNP40 -521644 sc-eQTL 8.30e-01 0.021 0.0977 0.816 cMono_S100A L2
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 5.78e-01 0.0643 0.115 0.816 cMono_S100A L2
ENSG00000134644 PUM1 -290847 sc-eQTL 3.78e-02 -0.173 0.0826 0.816 cMono_S100A L2
ENSG00000162511 LAPTM5 17370 sc-eQTL 4.00e-01 -0.054 0.0641 0.816 cMono_S100A L2
ENSG00000162512 SDC3 -133614 sc-eQTL 9.10e-01 -0.0125 0.111 0.816 cMono_S100A L2
ENSG00000162517 PEF1 -869752 sc-eQTL 2.54e-01 -0.114 0.0998 0.816 cMono_S100A L2
ENSG00000168528 SERINC2 -634421 sc-eQTL 7.35e-01 -0.0398 0.117 0.816 cMono_S100A L2
ENSG00000284543 LINC01226 -731082 sc-eQTL 5.69e-01 -0.0543 0.0953 0.816 cMono_S100A L2
ENSG00000287510 AL137857.1 43451 sc-eQTL 6.73e-01 -0.0404 0.0957 0.816 cMono_S100A L2
ENSG00000060688 SNRNP40 -521644 sc-eQTL 5.05e-01 0.0915 0.137 0.812 gdT L2
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 1.75e-01 0.159 0.117 0.812 gdT L2
ENSG00000134644 PUM1 -290847 sc-eQTL 9.93e-01 -0.00107 0.121 0.812 gdT L2
ENSG00000162511 LAPTM5 17370 sc-eQTL 4.80e-01 0.0932 0.132 0.812 gdT L2
ENSG00000162517 PEF1 -869752 sc-eQTL 1.85e-01 -0.16 0.12 0.812 gdT L2
ENSG00000186056 MATN1-AS1 56640 sc-eQTL 9.72e-01 0.00425 0.122 0.812 gdT L2
ENSG00000287510 AL137857.1 43451 sc-eQTL 8.37e-01 0.0244 0.118 0.812 gdT L2
ENSG00000060688 SNRNP40 -521644 sc-eQTL 8.73e-01 -0.0177 0.11 0.822 intMono L2
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 5.82e-01 -0.0652 0.118 0.822 intMono L2
ENSG00000134644 PUM1 -290847 sc-eQTL 7.89e-01 -0.0269 0.1 0.822 intMono L2
ENSG00000162511 LAPTM5 17370 sc-eQTL 6.43e-01 0.0366 0.0788 0.822 intMono L2
ENSG00000162512 SDC3 -133614 sc-eQTL 8.54e-01 -0.0199 0.108 0.822 intMono L2
ENSG00000162517 PEF1 -869752 sc-eQTL 8.13e-01 0.0269 0.113 0.822 intMono L2
ENSG00000168528 SERINC2 -634421 sc-eQTL 8.33e-01 0.0238 0.113 0.822 intMono L2
ENSG00000284543 LINC01226 -731082 sc-eQTL 2.99e-01 -0.111 0.107 0.822 intMono L2
ENSG00000287510 AL137857.1 43451 sc-eQTL 6.21e-01 0.0531 0.107 0.822 intMono L2
ENSG00000060688 SNRNP40 -521644 sc-eQTL 9.99e-01 7.61e-05 0.103 0.814 ncMono L2
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 9.93e-01 -0.000991 0.11 0.814 ncMono L2
ENSG00000134644 PUM1 -290847 sc-eQTL 7.93e-01 -0.0236 0.0901 0.814 ncMono L2
ENSG00000162511 LAPTM5 17370 sc-eQTL 2.79e-02 0.179 0.0809 0.814 ncMono L2
ENSG00000162512 SDC3 -133614 sc-eQTL 9.04e-01 0.0111 0.0918 0.814 ncMono L2
ENSG00000162517 PEF1 -869752 sc-eQTL 3.01e-01 -0.109 0.105 0.814 ncMono L2
ENSG00000168528 SERINC2 -634421 sc-eQTL 8.70e-01 -0.0165 0.1 0.814 ncMono L2
ENSG00000284543 LINC01226 -731082 sc-eQTL 7.51e-01 -0.0319 0.1 0.814 ncMono L2
ENSG00000287510 AL137857.1 43451 sc-eQTL 7.41e-01 0.0343 0.104 0.814 ncMono L2
ENSG00000060688 SNRNP40 -521644 sc-eQTL 6.05e-01 0.0613 0.118 0.816 pDC L2
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 6.91e-01 -0.0516 0.13 0.816 pDC L2
ENSG00000134644 PUM1 -290847 sc-eQTL 2.89e-01 -0.114 0.107 0.816 pDC L2
ENSG00000162511 LAPTM5 17370 sc-eQTL 1.13e-01 0.158 0.0992 0.816 pDC L2
ENSG00000162517 PEF1 -869752 sc-eQTL 8.79e-01 0.0197 0.13 0.816 pDC L2
ENSG00000168528 SERINC2 -634421 sc-eQTL 1.33e-01 0.182 0.12 0.816 pDC L2
ENSG00000284543 LINC01226 -731082 sc-eQTL 8.53e-01 -0.0175 0.0942 0.816 pDC L2
ENSG00000287510 AL137857.1 43451 sc-eQTL 3.19e-01 -0.11 0.11 0.816 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -521644 sc-eQTL 8.94e-01 -0.0155 0.116 0.816 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 8.14e-01 0.0228 0.0966 0.816 B_Memory LOneK1K
ENSG00000134644 PUM1 -290847 sc-eQTL 1.81e-02 -0.201 0.0845 0.816 B_Memory LOneK1K
ENSG00000162510 MATN1 51559 sc-eQTL 3.72e-01 -0.0871 0.0974 0.816 B_Memory LOneK1K
ENSG00000162511 LAPTM5 17370 sc-eQTL 3.75e-02 -0.127 0.0607 0.816 B_Memory LOneK1K
ENSG00000162517 PEF1 -869752 sc-eQTL 2.62e-01 -0.114 0.101 0.816 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 56640 sc-eQTL 6.72e-01 -0.0343 0.0811 0.816 B_Memory LOneK1K
ENSG00000287510 AL137857.1 43451 sc-eQTL 4.09e-01 -0.073 0.0882 0.816 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -521644 sc-eQTL 7.12e-01 -0.039 0.105 0.816 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 9.72e-01 0.00295 0.0834 0.816 B_Naive LOneK1K
ENSG00000134644 PUM1 -290847 sc-eQTL 5.27e-01 0.05 0.0789 0.816 B_Naive LOneK1K
ENSG00000162510 MATN1 51559 sc-eQTL 5.55e-01 0.0449 0.0759 0.816 B_Naive LOneK1K
ENSG00000162511 LAPTM5 17370 sc-eQTL 8.46e-01 -0.0104 0.0535 0.816 B_Naive LOneK1K
ENSG00000162517 PEF1 -869752 sc-eQTL 9.74e-01 0.00318 0.0977 0.816 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 56640 sc-eQTL 2.67e-02 -0.152 0.0683 0.816 B_Naive LOneK1K
ENSG00000287510 AL137857.1 43451 sc-eQTL 3.55e-02 -0.172 0.0812 0.816 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -521644 sc-eQTL 7.14e-01 0.0326 0.0887 0.816 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 5.11e-01 0.0661 0.1 0.816 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -290847 sc-eQTL 8.54e-02 -0.11 0.0637 0.816 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 17370 sc-eQTL 7.77e-01 0.016 0.0563 0.816 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -133614 sc-eQTL 1.28e-01 -0.175 0.114 0.816 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -869752 sc-eQTL 5.27e-01 -0.0512 0.0807 0.816 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -634421 sc-eQTL 8.23e-01 -0.0264 0.118 0.816 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -731082 sc-eQTL 3.79e-01 0.0853 0.0968 0.816 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 43451 sc-eQTL 8.16e-01 -0.0211 0.0908 0.816 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -521644 sc-eQTL 6.13e-01 0.049 0.0966 0.815 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 7.96e-01 -0.0274 0.106 0.815 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -290847 sc-eQTL 9.37e-01 -0.00687 0.0867 0.815 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 17370 sc-eQTL 1.83e-01 0.0922 0.0691 0.815 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -133614 sc-eQTL 5.63e-01 0.0586 0.101 0.815 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -869752 sc-eQTL 7.99e-01 -0.0235 0.092 0.815 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -634421 sc-eQTL 8.05e-01 0.0259 0.105 0.815 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -731082 sc-eQTL 8.12e-01 -0.0237 0.0997 0.815 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 43451 sc-eQTL 5.06e-01 0.0664 0.0997 0.815 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -521644 sc-eQTL 2.62e-01 -0.124 0.11 0.815 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -989749 sc-eQTL 5.37e-01 0.0581 0.094 0.815 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -521838 sc-eQTL 1.94e-01 -0.0978 0.0751 0.815 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -290847 sc-eQTL 5.21e-01 -0.0531 0.0826 0.815 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 17370 sc-eQTL 2.00e-04 0.338 0.0894 0.815 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -869752 sc-eQTL 1.11e-01 0.112 0.0697 0.815 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 56640 sc-eQTL 5.46e-01 0.0644 0.106 0.815 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 43451 sc-eQTL 5.86e-01 0.0502 0.0919 0.815 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162511 LAPTM5 17370 eQTL 3.77e-19 0.104 0.0114 0.0 0.0 0.208
ENSG00000162512 SDC3 -133614 eQTL 2.44e-05 -0.123 0.0291 0.0 0.0 0.208
ENSG00000186056 MATN1-AS1 56640 eQTL 1.07e-03 -0.0489 0.0149 0.00108 0.0 0.208

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000121753 \N -989749 1.5e-06 8.9e-07 3.35e-07 6.31e-07 1.07e-07 6.36e-07 8.96e-07 1.45e-07 5.02e-07 3.22e-07 1.08e-06 5.22e-07 1.95e-06 2.14e-07 4.95e-07 2.99e-07 5.92e-07 5.68e-07 3.36e-07 3.72e-07 2.49e-07 5.69e-07 5.66e-07 4.59e-07 1.53e-06 2.44e-07 4.97e-07 2.69e-07 5.78e-07 8.63e-07 4.02e-07 5.88e-08 5.78e-08 6.68e-07 5.85e-07 2.15e-07 2.9e-07 1.16e-07 4.94e-07 3.53e-07 1.85e-07 1.13e-06 4.14e-07 5.71e-08 1.93e-07 7.36e-08 1.67e-07 7.19e-08 5.39e-08
ENSG00000162511 LAPTM5 17370 0.000129 1.8e-05 2.64e-06 1.26e-05 3.5e-06 2.06e-05 2.83e-05 3.36e-06 1.85e-05 9.43e-06 2.15e-05 8.43e-06 3.3e-05 6.24e-06 5.36e-06 1.4e-05 1.17e-05 3.11e-05 4.19e-06 4.11e-06 9.62e-06 2.42e-05 2.35e-05 5.62e-06 3.13e-05 5.99e-06 8.97e-06 7.68e-06 1.77e-05 1.93e-05 1.14e-05 1.06e-06 1.45e-06 4.75e-06 8.46e-06 3.17e-06 1.72e-06 1.99e-06 2.95e-06 2.6e-06 1.52e-06 3.06e-05 4.94e-06 1.64e-07 1.97e-06 2.27e-06 3.42e-06 8.24e-07 4.51e-07
ENSG00000162512 SDC3 -133614 7.44e-05 9.31e-06 9.72e-07 4.32e-06 1.71e-06 8.49e-06 9.65e-06 1.22e-06 5.24e-06 4.22e-06 9.35e-06 3.19e-06 1.25e-05 2.24e-06 2.07e-06 5.5e-06 3.85e-06 9.79e-06 1.53e-06 2.44e-06 3.56e-06 7.91e-06 6.57e-06 1.91e-06 9.99e-06 2.77e-06 4.6e-06 1.74e-06 6.77e-06 7.79e-06 3.52e-06 4.81e-07 5.74e-07 2.44e-06 4.58e-06 1.16e-06 9.75e-07 4.51e-07 1.42e-06 1.01e-06 6.55e-07 9.84e-06 2.63e-06 1.89e-07 7.64e-07 1.03e-06 9.08e-07 4.11e-07 5.88e-07