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Genes within 1Mb (chr1:30768930:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -527858 sc-eQTL 5.32e-01 -0.0546 0.0873 0.314 B L1
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 8.49e-01 -0.0133 0.0699 0.314 B L1
ENSG00000134644 PUM1 -297061 sc-eQTL 6.15e-01 0.0296 0.0586 0.314 B L1
ENSG00000162510 MATN1 45345 sc-eQTL 9.19e-01 0.00629 0.0617 0.314 B L1
ENSG00000162511 LAPTM5 11156 sc-eQTL 8.45e-03 0.126 0.0475 0.314 B L1
ENSG00000162517 PEF1 -875966 sc-eQTL 9.70e-01 0.00278 0.0729 0.314 B L1
ENSG00000186056 MATN1-AS1 50426 sc-eQTL 2.72e-01 0.0621 0.0565 0.314 B L1
ENSG00000287510 AL137857.1 37237 sc-eQTL 9.82e-01 -0.00152 0.067 0.314 B L1
ENSG00000060688 SNRNP40 -527858 sc-eQTL 7.34e-01 -0.0257 0.0753 0.314 CD4T L1
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 8.81e-01 0.00885 0.0588 0.314 CD4T L1
ENSG00000134644 PUM1 -297061 sc-eQTL 6.80e-01 0.0216 0.0524 0.314 CD4T L1
ENSG00000162511 LAPTM5 11156 sc-eQTL 1.14e-01 -0.0915 0.0577 0.314 CD4T L1
ENSG00000162517 PEF1 -875966 sc-eQTL 3.14e-01 -0.0611 0.0605 0.314 CD4T L1
ENSG00000186056 MATN1-AS1 50426 sc-eQTL 9.38e-01 0.00401 0.0519 0.314 CD4T L1
ENSG00000287510 AL137857.1 37237 sc-eQTL 9.04e-01 0.00752 0.0622 0.314 CD4T L1
ENSG00000060688 SNRNP40 -527858 sc-eQTL 6.28e-01 -0.0481 0.0993 0.314 CD8T L1
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 5.49e-01 -0.0396 0.066 0.314 CD8T L1
ENSG00000134644 PUM1 -297061 sc-eQTL 7.52e-01 -0.0184 0.0582 0.314 CD8T L1
ENSG00000162511 LAPTM5 11156 sc-eQTL 7.73e-01 -0.0163 0.0565 0.314 CD8T L1
ENSG00000162517 PEF1 -875966 sc-eQTL 9.65e-01 0.00308 0.0696 0.314 CD8T L1
ENSG00000186056 MATN1-AS1 50426 sc-eQTL 8.38e-01 -0.0136 0.0662 0.314 CD8T L1
ENSG00000287510 AL137857.1 37237 sc-eQTL 7.29e-01 -0.0289 0.0832 0.314 CD8T L1
ENSG00000060688 SNRNP40 -527858 sc-eQTL 5.45e-01 0.0549 0.0904 0.313 DC L1
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 1.39e-01 -0.158 0.107 0.313 DC L1
ENSG00000134644 PUM1 -297061 sc-eQTL 3.49e-01 -0.0785 0.0838 0.313 DC L1
ENSG00000162511 LAPTM5 11156 sc-eQTL 6.51e-01 -0.0271 0.0599 0.313 DC L1
ENSG00000162517 PEF1 -875966 sc-eQTL 3.43e-01 0.0921 0.097 0.313 DC L1
ENSG00000168528 SERINC2 -640635 sc-eQTL 7.76e-01 0.0281 0.0988 0.313 DC L1
ENSG00000284543 LINC01226 -737296 sc-eQTL 5.89e-01 0.0354 0.0654 0.313 DC L1
ENSG00000287510 AL137857.1 37237 sc-eQTL 7.79e-02 0.167 0.094 0.313 DC L1
ENSG00000060688 SNRNP40 -527858 sc-eQTL 6.26e-02 -0.127 0.0678 0.314 Mono L1
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 5.94e-01 -0.0452 0.0847 0.314 Mono L1
ENSG00000134644 PUM1 -297061 sc-eQTL 5.59e-01 0.0317 0.0543 0.314 Mono L1
ENSG00000162511 LAPTM5 11156 sc-eQTL 4.74e-02 0.0987 0.0495 0.314 Mono L1
ENSG00000162512 SDC3 -139828 sc-eQTL 1.80e-01 0.129 0.0956 0.314 Mono L1
ENSG00000162517 PEF1 -875966 sc-eQTL 8.96e-01 -0.00879 0.0674 0.314 Mono L1
ENSG00000168528 SERINC2 -640635 sc-eQTL 3.99e-01 -0.087 0.103 0.314 Mono L1
ENSG00000284543 LINC01226 -737296 sc-eQTL 1.76e-01 -0.123 0.0904 0.314 Mono L1
ENSG00000287510 AL137857.1 37237 sc-eQTL 9.51e-01 -0.00488 0.0793 0.314 Mono L1
ENSG00000060688 SNRNP40 -527858 sc-eQTL 4.89e-01 -0.0652 0.0941 0.313 NK L1
ENSG00000121753 ADGRB2 -995963 sc-eQTL 7.16e-01 0.0295 0.0811 0.313 NK L1
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 7.28e-01 -0.0225 0.0645 0.313 NK L1
ENSG00000134644 PUM1 -297061 sc-eQTL 9.62e-01 -0.00319 0.0676 0.313 NK L1
ENSG00000162511 LAPTM5 11156 sc-eQTL 1.49e-01 0.112 0.0774 0.313 NK L1
ENSG00000162517 PEF1 -875966 sc-eQTL 5.98e-01 0.03 0.0568 0.313 NK L1
ENSG00000186056 MATN1-AS1 50426 sc-eQTL 4.70e-01 -0.0632 0.0874 0.313 NK L1
ENSG00000287510 AL137857.1 37237 sc-eQTL 3.33e-01 0.0782 0.0806 0.313 NK L1
ENSG00000060688 SNRNP40 -527858 sc-eQTL 1.24e-01 0.111 0.072 0.314 Other_T L1
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 4.12e-01 0.0635 0.0773 0.314 Other_T L1
ENSG00000134644 PUM1 -297061 sc-eQTL 3.49e-01 0.0652 0.0695 0.314 Other_T L1
ENSG00000162511 LAPTM5 11156 sc-eQTL 5.56e-01 -0.0336 0.057 0.314 Other_T L1
ENSG00000162517 PEF1 -875966 sc-eQTL 6.75e-01 -0.032 0.0762 0.314 Other_T L1
ENSG00000186056 MATN1-AS1 50426 sc-eQTL 1.75e-02 -0.221 0.0922 0.314 Other_T L1
ENSG00000287510 AL137857.1 37237 sc-eQTL 4.82e-01 -0.0684 0.0972 0.314 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -527858 sc-eQTL 4.42e-01 -0.0866 0.112 0.316 B_Activated L2
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 3.94e-01 -0.0967 0.113 0.316 B_Activated L2
ENSG00000134644 PUM1 -297061 sc-eQTL 6.60e-01 0.0464 0.105 0.316 B_Activated L2
ENSG00000162510 MATN1 45345 sc-eQTL 7.28e-01 0.0321 0.0921 0.316 B_Activated L2
ENSG00000162511 LAPTM5 11156 sc-eQTL 7.48e-01 0.0207 0.0642 0.316 B_Activated L2
ENSG00000162517 PEF1 -875966 sc-eQTL 5.04e-01 -0.0732 0.109 0.316 B_Activated L2
ENSG00000186056 MATN1-AS1 50426 sc-eQTL 9.70e-02 -0.172 0.103 0.316 B_Activated L2
ENSG00000287510 AL137857.1 37237 sc-eQTL 7.02e-01 -0.0352 0.0917 0.316 B_Activated L2
ENSG00000060688 SNRNP40 -527858 sc-eQTL 9.75e-02 -0.176 0.106 0.313 B_Intermediate L2
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 1.98e-01 -0.114 0.0884 0.313 B_Intermediate L2
ENSG00000134644 PUM1 -297061 sc-eQTL 3.31e-01 -0.0814 0.0836 0.313 B_Intermediate L2
ENSG00000162510 MATN1 45345 sc-eQTL 5.50e-01 -0.0522 0.0871 0.313 B_Intermediate L2
ENSG00000162511 LAPTM5 11156 sc-eQTL 9.39e-01 0.00411 0.0535 0.313 B_Intermediate L2
ENSG00000162517 PEF1 -875966 sc-eQTL 3.62e-01 0.0905 0.0991 0.313 B_Intermediate L2
ENSG00000186056 MATN1-AS1 50426 sc-eQTL 7.47e-01 0.0242 0.0751 0.313 B_Intermediate L2
ENSG00000287510 AL137857.1 37237 sc-eQTL 7.53e-01 0.0265 0.084 0.313 B_Intermediate L2
ENSG00000060688 SNRNP40 -527858 sc-eQTL 8.84e-01 -0.0153 0.104 0.315 B_Memory L2
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 2.98e-01 0.0997 0.0956 0.315 B_Memory L2
ENSG00000134644 PUM1 -297061 sc-eQTL 6.54e-01 -0.0374 0.0834 0.315 B_Memory L2
ENSG00000162510 MATN1 45345 sc-eQTL 7.04e-01 -0.0304 0.0798 0.315 B_Memory L2
ENSG00000162511 LAPTM5 11156 sc-eQTL 4.29e-02 0.143 0.0701 0.315 B_Memory L2
ENSG00000162517 PEF1 -875966 sc-eQTL 3.89e-01 -0.0815 0.0943 0.315 B_Memory L2
ENSG00000186056 MATN1-AS1 50426 sc-eQTL 2.00e-01 0.104 0.0807 0.315 B_Memory L2
ENSG00000287510 AL137857.1 37237 sc-eQTL 5.31e-01 0.0594 0.0948 0.315 B_Memory L2
ENSG00000060688 SNRNP40 -527858 sc-eQTL 4.34e-01 -0.074 0.0945 0.314 B_Naive1 L2
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 9.14e-01 -0.00882 0.0817 0.314 B_Naive1 L2
ENSG00000134644 PUM1 -297061 sc-eQTL 2.58e-01 0.0814 0.0718 0.314 B_Naive1 L2
ENSG00000162510 MATN1 45345 sc-eQTL 7.52e-01 -0.0231 0.0731 0.314 B_Naive1 L2
ENSG00000162511 LAPTM5 11156 sc-eQTL 3.26e-02 0.104 0.0483 0.314 B_Naive1 L2
ENSG00000162517 PEF1 -875966 sc-eQTL 1.46e-01 -0.125 0.0857 0.314 B_Naive1 L2
ENSG00000186056 MATN1-AS1 50426 sc-eQTL 5.56e-01 0.0378 0.0641 0.314 B_Naive1 L2
ENSG00000287510 AL137857.1 37237 sc-eQTL 8.93e-01 0.0107 0.0792 0.314 B_Naive1 L2
ENSG00000060688 SNRNP40 -527858 sc-eQTL 6.99e-01 0.0394 0.102 0.315 B_Naive2 L2
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 5.23e-01 0.0537 0.0839 0.315 B_Naive2 L2
ENSG00000134644 PUM1 -297061 sc-eQTL 9.95e-01 0.000466 0.0822 0.315 B_Naive2 L2
ENSG00000162510 MATN1 45345 sc-eQTL 1.22e-01 0.122 0.0784 0.315 B_Naive2 L2
ENSG00000162511 LAPTM5 11156 sc-eQTL 2.65e-01 0.0597 0.0534 0.315 B_Naive2 L2
ENSG00000162517 PEF1 -875966 sc-eQTL 6.09e-02 0.182 0.0966 0.315 B_Naive2 L2
ENSG00000186056 MATN1-AS1 50426 sc-eQTL 8.63e-01 0.0134 0.078 0.315 B_Naive2 L2
ENSG00000287510 AL137857.1 37237 sc-eQTL 4.70e-01 0.0609 0.0842 0.315 B_Naive2 L2
ENSG00000060688 SNRNP40 -527858 sc-eQTL 2.73e-02 -0.225 0.101 0.311 CD4_CTL L2
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 1.86e-01 -0.133 0.1 0.311 CD4_CTL L2
ENSG00000134644 PUM1 -297061 sc-eQTL 4.33e-01 -0.0776 0.0987 0.311 CD4_CTL L2
ENSG00000162511 LAPTM5 11156 sc-eQTL 7.59e-01 -0.027 0.0881 0.311 CD4_CTL L2
ENSG00000162517 PEF1 -875966 sc-eQTL 9.54e-01 0.00518 0.0904 0.311 CD4_CTL L2
ENSG00000186056 MATN1-AS1 50426 sc-eQTL 8.04e-01 0.024 0.0964 0.311 CD4_CTL L2
ENSG00000287510 AL137857.1 37237 sc-eQTL 6.86e-01 -0.0344 0.085 0.311 CD4_CTL L2
ENSG00000060688 SNRNP40 -527858 sc-eQTL 5.25e-01 0.0501 0.0786 0.314 CD4_Naive L2
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 8.49e-01 0.0133 0.0697 0.314 CD4_Naive L2
ENSG00000134644 PUM1 -297061 sc-eQTL 7.10e-01 0.0207 0.0557 0.314 CD4_Naive L2
ENSG00000162511 LAPTM5 11156 sc-eQTL 7.40e-02 -0.106 0.0592 0.314 CD4_Naive L2
ENSG00000162517 PEF1 -875966 sc-eQTL 2.93e-01 -0.0688 0.0652 0.314 CD4_Naive L2
ENSG00000186056 MATN1-AS1 50426 sc-eQTL 4.52e-01 -0.0455 0.0605 0.314 CD4_Naive L2
ENSG00000287510 AL137857.1 37237 sc-eQTL 8.08e-01 0.0169 0.0695 0.314 CD4_Naive L2
ENSG00000060688 SNRNP40 -527858 sc-eQTL 6.40e-01 -0.0462 0.0985 0.314 CD4_TCM L2
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 9.93e-01 0.000669 0.0795 0.314 CD4_TCM L2
ENSG00000134644 PUM1 -297061 sc-eQTL 9.07e-01 0.00821 0.0704 0.314 CD4_TCM L2
ENSG00000162511 LAPTM5 11156 sc-eQTL 3.66e-01 -0.0527 0.0583 0.314 CD4_TCM L2
ENSG00000162517 PEF1 -875966 sc-eQTL 5.79e-02 -0.148 0.0776 0.314 CD4_TCM L2
ENSG00000186056 MATN1-AS1 50426 sc-eQTL 1.08e-01 0.119 0.0736 0.314 CD4_TCM L2
ENSG00000287510 AL137857.1 37237 sc-eQTL 8.18e-01 0.0191 0.0825 0.314 CD4_TCM L2
ENSG00000060688 SNRNP40 -527858 sc-eQTL 8.68e-01 -0.0165 0.0987 0.314 CD4_TEM L2
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 7.78e-01 0.0266 0.094 0.314 CD4_TEM L2
ENSG00000134644 PUM1 -297061 sc-eQTL 1.76e-02 -0.185 0.0773 0.314 CD4_TEM L2
ENSG00000162511 LAPTM5 11156 sc-eQTL 8.98e-02 0.134 0.0787 0.314 CD4_TEM L2
ENSG00000162517 PEF1 -875966 sc-eQTL 4.14e-01 0.0726 0.0886 0.314 CD4_TEM L2
ENSG00000186056 MATN1-AS1 50426 sc-eQTL 4.33e-01 0.0728 0.0926 0.314 CD4_TEM L2
ENSG00000287510 AL137857.1 37237 sc-eQTL 5.60e-01 0.0533 0.0913 0.314 CD4_TEM L2
ENSG00000060688 SNRNP40 -527858 sc-eQTL 8.35e-01 -0.0225 0.108 0.314 CD8_CTL L2
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 1.88e-01 -0.109 0.0823 0.314 CD8_CTL L2
ENSG00000134644 PUM1 -297061 sc-eQTL 8.63e-01 0.0138 0.0802 0.314 CD8_CTL L2
ENSG00000162511 LAPTM5 11156 sc-eQTL 8.36e-01 -0.0184 0.0888 0.314 CD8_CTL L2
ENSG00000162517 PEF1 -875966 sc-eQTL 9.85e-01 -0.00144 0.0774 0.314 CD8_CTL L2
ENSG00000186056 MATN1-AS1 50426 sc-eQTL 4.77e-01 0.0665 0.0933 0.314 CD8_CTL L2
ENSG00000287510 AL137857.1 37237 sc-eQTL 5.06e-01 -0.0584 0.0878 0.314 CD8_CTL L2
ENSG00000060688 SNRNP40 -527858 sc-eQTL 6.64e-01 -0.0427 0.0981 0.314 CD8_Naive L2
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 9.46e-01 -0.00577 0.0847 0.314 CD8_Naive L2
ENSG00000134644 PUM1 -297061 sc-eQTL 4.58e-01 -0.0506 0.068 0.314 CD8_Naive L2
ENSG00000162511 LAPTM5 11156 sc-eQTL 7.96e-02 -0.114 0.0648 0.314 CD8_Naive L2
ENSG00000162517 PEF1 -875966 sc-eQTL 9.18e-01 0.00935 0.0908 0.314 CD8_Naive L2
ENSG00000186056 MATN1-AS1 50426 sc-eQTL 3.87e-01 -0.0706 0.0814 0.314 CD8_Naive L2
ENSG00000287510 AL137857.1 37237 sc-eQTL 5.70e-01 -0.0504 0.0887 0.314 CD8_Naive L2
ENSG00000060688 SNRNP40 -527858 sc-eQTL 4.72e-02 -0.223 0.112 0.31 CD8_TCM L2
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 5.69e-01 -0.0589 0.103 0.31 CD8_TCM L2
ENSG00000134644 PUM1 -297061 sc-eQTL 1.37e-01 0.144 0.0966 0.31 CD8_TCM L2
ENSG00000162511 LAPTM5 11156 sc-eQTL 6.02e-01 -0.0531 0.102 0.31 CD8_TCM L2
ENSG00000162517 PEF1 -875966 sc-eQTL 2.40e-01 0.122 0.104 0.31 CD8_TCM L2
ENSG00000186056 MATN1-AS1 50426 sc-eQTL 8.64e-01 -0.0162 0.0941 0.31 CD8_TCM L2
ENSG00000287510 AL137857.1 37237 sc-eQTL 1.15e-01 0.15 0.0945 0.31 CD8_TCM L2
ENSG00000060688 SNRNP40 -527858 sc-eQTL 6.73e-01 0.0435 0.103 0.317 CD8_TEM L2
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 1.22e-01 -0.152 0.0981 0.317 CD8_TEM L2
ENSG00000134644 PUM1 -297061 sc-eQTL 3.04e-01 0.104 0.101 0.317 CD8_TEM L2
ENSG00000162511 LAPTM5 11156 sc-eQTL 1.49e-01 -0.137 0.0944 0.317 CD8_TEM L2
ENSG00000162517 PEF1 -875966 sc-eQTL 7.67e-01 0.0265 0.0893 0.317 CD8_TEM L2
ENSG00000186056 MATN1-AS1 50426 sc-eQTL 7.32e-01 -0.0337 0.0984 0.317 CD8_TEM L2
ENSG00000287510 AL137857.1 37237 sc-eQTL 3.60e-01 0.0816 0.0889 0.317 CD8_TEM L2
ENSG00000060688 SNRNP40 -527858 sc-eQTL 5.56e-01 0.0635 0.108 0.312 MAIT L2
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 9.58e-01 -0.00508 0.0954 0.312 MAIT L2
ENSG00000134644 PUM1 -297061 sc-eQTL 2.66e-01 0.102 0.0912 0.312 MAIT L2
ENSG00000162511 LAPTM5 11156 sc-eQTL 4.73e-01 -0.0619 0.0862 0.312 MAIT L2
ENSG00000162517 PEF1 -875966 sc-eQTL 2.80e-02 -0.207 0.0937 0.312 MAIT L2
ENSG00000186056 MATN1-AS1 50426 sc-eQTL 1.22e-01 -0.148 0.0956 0.312 MAIT L2
ENSG00000287510 AL137857.1 37237 sc-eQTL 3.14e-01 0.0997 0.0988 0.312 MAIT L2
ENSG00000060688 SNRNP40 -527858 sc-eQTL 7.70e-01 -0.031 0.106 0.313 NK_CD56bright L2
ENSG00000121753 ADGRB2 -995963 sc-eQTL 3.71e-01 -0.0742 0.0827 0.313 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 8.00e-01 0.0227 0.0895 0.313 NK_CD56bright L2
ENSG00000134644 PUM1 -297061 sc-eQTL 4.85e-01 -0.0656 0.0938 0.313 NK_CD56bright L2
ENSG00000162511 LAPTM5 11156 sc-eQTL 5.75e-01 0.052 0.0926 0.313 NK_CD56bright L2
ENSG00000162517 PEF1 -875966 sc-eQTL 8.37e-01 0.0186 0.09 0.313 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 50426 sc-eQTL 8.84e-01 -0.0136 0.0931 0.313 NK_CD56bright L2
ENSG00000287510 AL137857.1 37237 sc-eQTL 7.19e-01 0.0331 0.0917 0.313 NK_CD56bright L2
ENSG00000060688 SNRNP40 -527858 sc-eQTL 6.92e-01 -0.0398 0.1 0.312 NK_CD56dim L2
ENSG00000121753 ADGRB2 -995963 sc-eQTL 2.88e-01 0.0938 0.0881 0.312 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 6.04e-01 -0.0386 0.0742 0.312 NK_CD56dim L2
ENSG00000134644 PUM1 -297061 sc-eQTL 3.90e-01 -0.0655 0.076 0.312 NK_CD56dim L2
ENSG00000162511 LAPTM5 11156 sc-eQTL 1.79e-01 0.109 0.0809 0.312 NK_CD56dim L2
ENSG00000162517 PEF1 -875966 sc-eQTL 5.24e-01 -0.046 0.0722 0.312 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 50426 sc-eQTL 3.96e-01 -0.0865 0.102 0.312 NK_CD56dim L2
ENSG00000287510 AL137857.1 37237 sc-eQTL 4.51e-01 0.0633 0.0838 0.312 NK_CD56dim L2
ENSG00000060688 SNRNP40 -527858 sc-eQTL 2.11e-01 -0.132 0.106 0.317 NK_HLA L2
ENSG00000121753 ADGRB2 -995963 sc-eQTL 6.23e-01 0.0414 0.0841 0.317 NK_HLA L2
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 9.64e-01 -0.00425 0.0946 0.317 NK_HLA L2
ENSG00000134644 PUM1 -297061 sc-eQTL 5.25e-02 0.178 0.0913 0.317 NK_HLA L2
ENSG00000162511 LAPTM5 11156 sc-eQTL 5.86e-01 0.0479 0.0879 0.317 NK_HLA L2
ENSG00000162517 PEF1 -875966 sc-eQTL 8.02e-01 -0.0249 0.0991 0.317 NK_HLA L2
ENSG00000186056 MATN1-AS1 50426 sc-eQTL 5.48e-01 0.0562 0.0935 0.317 NK_HLA L2
ENSG00000287510 AL137857.1 37237 sc-eQTL 1.45e-01 -0.132 0.09 0.317 NK_HLA L2
ENSG00000060688 SNRNP40 -527858 sc-eQTL 8.71e-01 -0.016 0.0983 0.312 NK_cytokine L2
ENSG00000121753 ADGRB2 -995963 sc-eQTL 4.08e-01 -0.0735 0.0886 0.312 NK_cytokine L2
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 6.45e-01 0.0354 0.0766 0.312 NK_cytokine L2
ENSG00000134644 PUM1 -297061 sc-eQTL 9.57e-01 -0.00449 0.0829 0.312 NK_cytokine L2
ENSG00000162511 LAPTM5 11156 sc-eQTL 2.31e-01 0.109 0.091 0.312 NK_cytokine L2
ENSG00000162517 PEF1 -875966 sc-eQTL 8.02e-01 0.0196 0.0778 0.312 NK_cytokine L2
ENSG00000186056 MATN1-AS1 50426 sc-eQTL 2.89e-01 -0.103 0.0965 0.312 NK_cytokine L2
ENSG00000287510 AL137857.1 37237 sc-eQTL 9.92e-01 0.000862 0.09 0.312 NK_cytokine L2
ENSG00000060688 SNRNP40 -527858 sc-eQTL 7.75e-01 -0.032 0.112 0.311 PB L2
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 7.04e-01 0.0493 0.129 0.311 PB L2
ENSG00000134644 PUM1 -297061 sc-eQTL 9.85e-01 -0.00212 0.112 0.311 PB L2
ENSG00000162510 MATN1 45345 sc-eQTL 9.82e-01 0.00236 0.105 0.311 PB L2
ENSG00000162511 LAPTM5 11156 sc-eQTL 9.98e-01 -0.000222 0.0749 0.311 PB L2
ENSG00000162517 PEF1 -875966 sc-eQTL 7.83e-01 -0.0318 0.115 0.311 PB L2
ENSG00000186056 MATN1-AS1 50426 sc-eQTL 5.87e-01 -0.0558 0.102 0.311 PB L2
ENSG00000287510 AL137857.1 37237 sc-eQTL 2.84e-01 0.117 0.109 0.311 PB L2
ENSG00000060688 SNRNP40 -527858 sc-eQTL 9.92e-01 -0.000748 0.0786 0.315 Pro_T L2
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 9.87e-03 0.256 0.0982 0.315 Pro_T L2
ENSG00000134644 PUM1 -297061 sc-eQTL 8.30e-01 -0.02 0.0931 0.315 Pro_T L2
ENSG00000162511 LAPTM5 11156 sc-eQTL 4.35e-01 -0.0521 0.0667 0.315 Pro_T L2
ENSG00000162517 PEF1 -875966 sc-eQTL 6.98e-01 -0.038 0.098 0.315 Pro_T L2
ENSG00000186056 MATN1-AS1 50426 sc-eQTL 4.76e-01 -0.0665 0.0932 0.315 Pro_T L2
ENSG00000287510 AL137857.1 37237 sc-eQTL 7.09e-01 0.032 0.0858 0.315 Pro_T L2
ENSG00000060688 SNRNP40 -527858 sc-eQTL 9.52e-02 -0.17 0.102 0.314 Treg L2
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 9.84e-01 -0.00205 0.099 0.314 Treg L2
ENSG00000134644 PUM1 -297061 sc-eQTL 3.34e-01 0.0766 0.079 0.314 Treg L2
ENSG00000162511 LAPTM5 11156 sc-eQTL 6.68e-01 -0.039 0.0907 0.314 Treg L2
ENSG00000162517 PEF1 -875966 sc-eQTL 6.34e-01 -0.0467 0.0979 0.314 Treg L2
ENSG00000186056 MATN1-AS1 50426 sc-eQTL 5.05e-01 0.0617 0.0923 0.314 Treg L2
ENSG00000287510 AL137857.1 37237 sc-eQTL 8.75e-01 0.0145 0.0923 0.314 Treg L2
ENSG00000060688 SNRNP40 -527858 sc-eQTL 1.90e-01 0.141 0.107 0.31 cDC L2
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 5.92e-01 -0.0624 0.116 0.31 cDC L2
ENSG00000134644 PUM1 -297061 sc-eQTL 8.10e-01 0.0241 0.1 0.31 cDC L2
ENSG00000162511 LAPTM5 11156 sc-eQTL 8.36e-01 0.0145 0.0701 0.31 cDC L2
ENSG00000162517 PEF1 -875966 sc-eQTL 8.28e-01 0.0221 0.101 0.31 cDC L2
ENSG00000168528 SERINC2 -640635 sc-eQTL 3.56e-01 -0.083 0.0898 0.31 cDC L2
ENSG00000284543 LINC01226 -737296 sc-eQTL 6.40e-01 -0.0414 0.0884 0.31 cDC L2
ENSG00000287510 AL137857.1 37237 sc-eQTL 1.73e-02 0.225 0.0937 0.31 cDC L2
ENSG00000060688 SNRNP40 -527858 sc-eQTL 4.94e-01 -0.0562 0.082 0.314 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 3.96e-01 -0.0777 0.0914 0.314 cMono_IL1B L2
ENSG00000134644 PUM1 -297061 sc-eQTL 3.49e-01 0.0581 0.0618 0.314 cMono_IL1B L2
ENSG00000162511 LAPTM5 11156 sc-eQTL 2.88e-01 0.0578 0.0542 0.314 cMono_IL1B L2
ENSG00000162512 SDC3 -139828 sc-eQTL 1.90e-01 0.134 0.102 0.314 cMono_IL1B L2
ENSG00000162517 PEF1 -875966 sc-eQTL 1.96e-01 0.108 0.0834 0.314 cMono_IL1B L2
ENSG00000168528 SERINC2 -640635 sc-eQTL 2.46e-01 -0.12 0.103 0.314 cMono_IL1B L2
ENSG00000284543 LINC01226 -737296 sc-eQTL 3.99e-01 -0.0774 0.0915 0.314 cMono_IL1B L2
ENSG00000287510 AL137857.1 37237 sc-eQTL 3.51e-01 -0.0798 0.0853 0.314 cMono_IL1B L2
ENSG00000060688 SNRNP40 -527858 sc-eQTL 6.06e-02 -0.161 0.0852 0.314 cMono_S100A L2
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 5.62e-01 0.0589 0.101 0.314 cMono_S100A L2
ENSG00000134644 PUM1 -297061 sc-eQTL 7.73e-01 -0.0212 0.0734 0.314 cMono_S100A L2
ENSG00000162511 LAPTM5 11156 sc-eQTL 6.65e-02 0.103 0.056 0.314 cMono_S100A L2
ENSG00000162512 SDC3 -139828 sc-eQTL 5.75e-01 0.0547 0.0974 0.314 cMono_S100A L2
ENSG00000162517 PEF1 -875966 sc-eQTL 3.32e-01 -0.0853 0.0878 0.314 cMono_S100A L2
ENSG00000168528 SERINC2 -640635 sc-eQTL 3.95e-01 -0.0878 0.103 0.314 cMono_S100A L2
ENSG00000284543 LINC01226 -737296 sc-eQTL 2.32e-01 -0.1 0.0835 0.314 cMono_S100A L2
ENSG00000287510 AL137857.1 37237 sc-eQTL 9.87e-01 -0.00142 0.0842 0.314 cMono_S100A L2
ENSG00000060688 SNRNP40 -527858 sc-eQTL 5.79e-01 -0.0755 0.136 0.303 gdT L2
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 7.61e-01 0.0355 0.117 0.303 gdT L2
ENSG00000134644 PUM1 -297061 sc-eQTL 7.74e-01 0.0347 0.12 0.303 gdT L2
ENSG00000162511 LAPTM5 11156 sc-eQTL 1.53e-01 -0.187 0.13 0.303 gdT L2
ENSG00000162517 PEF1 -875966 sc-eQTL 5.46e-01 0.0723 0.119 0.303 gdT L2
ENSG00000186056 MATN1-AS1 50426 sc-eQTL 7.30e-01 -0.0416 0.121 0.303 gdT L2
ENSG00000287510 AL137857.1 37237 sc-eQTL 2.56e-02 -0.259 0.115 0.303 gdT L2
ENSG00000060688 SNRNP40 -527858 sc-eQTL 1.08e-01 -0.154 0.0955 0.316 intMono L2
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 7.17e-01 -0.0374 0.103 0.316 intMono L2
ENSG00000134644 PUM1 -297061 sc-eQTL 5.41e-01 0.0536 0.0875 0.316 intMono L2
ENSG00000162511 LAPTM5 11156 sc-eQTL 8.93e-02 0.117 0.0683 0.316 intMono L2
ENSG00000162512 SDC3 -139828 sc-eQTL 3.54e-01 0.0874 0.0939 0.316 intMono L2
ENSG00000162517 PEF1 -875966 sc-eQTL 2.76e-01 0.108 0.0986 0.316 intMono L2
ENSG00000168528 SERINC2 -640635 sc-eQTL 5.31e-01 -0.0617 0.0984 0.316 intMono L2
ENSG00000284543 LINC01226 -737296 sc-eQTL 1.45e-01 -0.136 0.0929 0.316 intMono L2
ENSG00000287510 AL137857.1 37237 sc-eQTL 4.10e-01 0.077 0.0932 0.316 intMono L2
ENSG00000060688 SNRNP40 -527858 sc-eQTL 9.08e-02 -0.155 0.0914 0.314 ncMono L2
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 3.23e-01 -0.097 0.0979 0.314 ncMono L2
ENSG00000134644 PUM1 -297061 sc-eQTL 5.91e-01 0.0431 0.0801 0.314 ncMono L2
ENSG00000162511 LAPTM5 11156 sc-eQTL 2.85e-01 0.0779 0.0726 0.314 ncMono L2
ENSG00000162512 SDC3 -139828 sc-eQTL 5.05e-01 0.0545 0.0816 0.314 ncMono L2
ENSG00000162517 PEF1 -875966 sc-eQTL 2.54e-01 -0.107 0.0933 0.314 ncMono L2
ENSG00000168528 SERINC2 -640635 sc-eQTL 6.44e-01 -0.0412 0.0891 0.314 ncMono L2
ENSG00000284543 LINC01226 -737296 sc-eQTL 9.82e-01 0.00206 0.089 0.314 ncMono L2
ENSG00000287510 AL137857.1 37237 sc-eQTL 1.30e-02 0.228 0.0909 0.314 ncMono L2
ENSG00000060688 SNRNP40 -527858 sc-eQTL 4.57e-01 -0.0781 0.105 0.305 pDC L2
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 3.98e-02 -0.236 0.114 0.305 pDC L2
ENSG00000134644 PUM1 -297061 sc-eQTL 2.35e-01 -0.114 0.0952 0.305 pDC L2
ENSG00000162511 LAPTM5 11156 sc-eQTL 8.38e-01 -0.0182 0.0889 0.305 pDC L2
ENSG00000162517 PEF1 -875966 sc-eQTL 7.86e-01 0.0313 0.115 0.305 pDC L2
ENSG00000168528 SERINC2 -640635 sc-eQTL 8.19e-01 0.0247 0.108 0.305 pDC L2
ENSG00000284543 LINC01226 -737296 sc-eQTL 9.97e-01 -0.000272 0.0837 0.305 pDC L2
ENSG00000287510 AL137857.1 37237 sc-eQTL 7.31e-01 -0.0338 0.0984 0.305 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -527858 sc-eQTL 5.27e-02 -0.196 0.1 0.314 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 9.06e-01 -0.00992 0.0843 0.314 B_Memory LOneK1K
ENSG00000134644 PUM1 -297061 sc-eQTL 1.55e-01 -0.106 0.0743 0.314 B_Memory LOneK1K
ENSG00000162510 MATN1 45345 sc-eQTL 8.88e-01 -0.012 0.0852 0.314 B_Memory LOneK1K
ENSG00000162511 LAPTM5 11156 sc-eQTL 5.50e-01 0.032 0.0535 0.314 B_Memory LOneK1K
ENSG00000162517 PEF1 -875966 sc-eQTL 6.81e-01 0.0365 0.0886 0.314 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 50426 sc-eQTL 6.37e-01 0.0334 0.0707 0.314 B_Memory LOneK1K
ENSG00000287510 AL137857.1 37237 sc-eQTL 6.04e-01 -0.0401 0.0771 0.314 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -527858 sc-eQTL 7.23e-01 -0.0329 0.0925 0.314 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 7.37e-01 0.0246 0.0732 0.314 B_Naive LOneK1K
ENSG00000134644 PUM1 -297061 sc-eQTL 5.18e-01 0.0447 0.0692 0.314 B_Naive LOneK1K
ENSG00000162510 MATN1 45345 sc-eQTL 7.21e-01 0.0239 0.0666 0.314 B_Naive LOneK1K
ENSG00000162511 LAPTM5 11156 sc-eQTL 7.55e-02 0.0832 0.0466 0.314 B_Naive LOneK1K
ENSG00000162517 PEF1 -875966 sc-eQTL 9.13e-01 -0.00934 0.0857 0.314 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 50426 sc-eQTL 3.37e-01 0.0582 0.0605 0.314 B_Naive LOneK1K
ENSG00000287510 AL137857.1 37237 sc-eQTL 8.07e-01 0.0176 0.072 0.314 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -527858 sc-eQTL 1.19e-01 -0.122 0.0779 0.314 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 7.35e-01 -0.0301 0.0887 0.314 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -297061 sc-eQTL 4.89e-01 0.0392 0.0565 0.314 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 11156 sc-eQTL 4.24e-02 0.101 0.0493 0.314 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -139828 sc-eQTL 2.26e-01 0.123 0.101 0.314 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -875966 sc-eQTL 8.03e-01 0.0178 0.0713 0.314 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -640635 sc-eQTL 3.01e-01 -0.108 0.104 0.314 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -737296 sc-eQTL 2.25e-01 -0.104 0.0853 0.314 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 37237 sc-eQTL 5.72e-01 -0.0453 0.0801 0.314 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -527858 sc-eQTL 4.97e-02 -0.172 0.0872 0.31 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 7.47e-01 -0.0311 0.0963 0.31 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -297061 sc-eQTL 5.15e-01 0.0513 0.0788 0.31 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 11156 sc-eQTL 1.03e-01 0.103 0.0627 0.31 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -139828 sc-eQTL 2.47e-01 0.107 0.0919 0.31 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -875966 sc-eQTL 4.97e-01 0.0569 0.0837 0.31 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -640635 sc-eQTL 8.66e-01 -0.0162 0.0956 0.31 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -737296 sc-eQTL 6.35e-02 -0.168 0.09 0.31 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 37237 sc-eQTL 1.12e-01 0.144 0.0903 0.31 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -527858 sc-eQTL 4.22e-01 -0.0763 0.0948 0.312 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -995963 sc-eQTL 7.64e-01 0.0243 0.0808 0.312 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -528052 sc-eQTL 6.04e-01 -0.0336 0.0648 0.312 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -297061 sc-eQTL 6.67e-01 0.0306 0.071 0.312 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 11156 sc-eQTL 1.32e-01 0.119 0.079 0.312 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -875966 sc-eQTL 7.64e-01 0.0181 0.0603 0.312 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 50426 sc-eQTL 5.72e-01 -0.0518 0.0915 0.312 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 37237 sc-eQTL 3.17e-01 0.079 0.0789 0.312 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000121766 ZCCHC17 -528052 eQTL 2.74e-02 0.0441 0.02 0.0 0.0 0.286
ENSG00000168528 SERINC2 -640635 eQTL 0.00299 -0.129 0.0433 0.0 0.0 0.286
ENSG00000186056 MATN1-AS1 50426 eQTL 7.30e-03 0.038 0.0141 0.00237 0.0 0.286

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000186056 MATN1-AS1 50426 1.73e-05 2.13e-05 4.47e-06 1.38e-05 3.17e-06 1.01e-05 2.53e-05 2.9e-06 2.01e-05 9.85e-06 2.41e-05 1.05e-05 3.42e-05 1.06e-05 5.11e-06 1.15e-05 1.02e-05 1.68e-05 5.37e-06 4.81e-06 8.31e-06 1.76e-05 1.93e-05 5.59e-06 3.25e-05 5.52e-06 8.05e-06 7.78e-06 2.01e-05 1.58e-05 1.24e-05 1.65e-06 1.49e-06 5.28e-06 9.4e-06 4.07e-06 2.54e-06 2.79e-06 3.62e-06 2.9e-06 1.62e-06 2.73e-05 2.65e-06 3.43e-07 1.07e-06 2.74e-06 3.4e-06 1.16e-06 9.67e-07