logo

Genes within 1Mb (chr1:30760556:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -536232 sc-eQTL 9.77e-01 0.0031 0.105 0.829 B L1
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 8.93e-01 -0.0114 0.0845 0.829 B L1
ENSG00000134644 PUM1 -305435 sc-eQTL 7.30e-01 -0.0245 0.0708 0.829 B L1
ENSG00000162510 MATN1 36971 sc-eQTL 7.75e-01 0.0213 0.0745 0.829 B L1
ENSG00000162511 LAPTM5 2782 sc-eQTL 8.87e-01 0.00833 0.0583 0.829 B L1
ENSG00000162517 PEF1 -884340 sc-eQTL 5.16e-01 -0.0573 0.088 0.829 B L1
ENSG00000186056 MATN1-AS1 42052 sc-eQTL 5.37e-02 -0.131 0.0678 0.829 B L1
ENSG00000287510 AL137857.1 28863 sc-eQTL 3.95e-02 -0.166 0.0801 0.829 B L1
ENSG00000060688 SNRNP40 -536232 sc-eQTL 3.86e-01 -0.0806 0.0929 0.829 CD4T L1
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 6.40e-01 -0.034 0.0727 0.829 CD4T L1
ENSG00000134644 PUM1 -305435 sc-eQTL 4.11e-01 0.0532 0.0646 0.829 CD4T L1
ENSG00000162511 LAPTM5 2782 sc-eQTL 6.03e-01 -0.0374 0.0717 0.829 CD4T L1
ENSG00000162517 PEF1 -884340 sc-eQTL 5.89e-01 -0.0406 0.075 0.829 CD4T L1
ENSG00000186056 MATN1-AS1 42052 sc-eQTL 3.46e-01 -0.0605 0.064 0.829 CD4T L1
ENSG00000287510 AL137857.1 28863 sc-eQTL 3.17e-01 0.0769 0.0767 0.829 CD4T L1
ENSG00000060688 SNRNP40 -536232 sc-eQTL 5.17e-01 -0.0785 0.121 0.829 CD8T L1
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 7.76e-01 0.0229 0.0806 0.829 CD8T L1
ENSG00000134644 PUM1 -305435 sc-eQTL 9.09e-01 -0.00815 0.071 0.829 CD8T L1
ENSG00000162511 LAPTM5 2782 sc-eQTL 1.28e-01 0.105 0.0686 0.829 CD8T L1
ENSG00000162517 PEF1 -884340 sc-eQTL 3.14e-01 -0.0856 0.0847 0.829 CD8T L1
ENSG00000186056 MATN1-AS1 42052 sc-eQTL 2.09e-01 -0.102 0.0805 0.829 CD8T L1
ENSG00000287510 AL137857.1 28863 sc-eQTL 5.42e-01 -0.062 0.101 0.829 CD8T L1
ENSG00000060688 SNRNP40 -536232 sc-eQTL 3.41e-01 0.105 0.11 0.831 DC L1
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 1.11e-01 -0.207 0.129 0.831 DC L1
ENSG00000134644 PUM1 -305435 sc-eQTL 5.36e-01 -0.0631 0.102 0.831 DC L1
ENSG00000162511 LAPTM5 2782 sc-eQTL 7.97e-01 0.0188 0.0728 0.831 DC L1
ENSG00000162517 PEF1 -884340 sc-eQTL 4.50e-01 0.0892 0.118 0.831 DC L1
ENSG00000168528 SERINC2 -649009 sc-eQTL 2.19e-01 0.147 0.12 0.831 DC L1
ENSG00000284543 LINC01226 -745670 sc-eQTL 8.18e-01 0.0184 0.0795 0.831 DC L1
ENSG00000287510 AL137857.1 28863 sc-eQTL 2.72e-01 -0.127 0.115 0.831 DC L1
ENSG00000060688 SNRNP40 -536232 sc-eQTL 2.38e-01 0.0968 0.0819 0.829 Mono L1
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 6.67e-01 0.0438 0.102 0.829 Mono L1
ENSG00000134644 PUM1 -305435 sc-eQTL 1.03e-01 -0.106 0.0649 0.829 Mono L1
ENSG00000162511 LAPTM5 2782 sc-eQTL 4.88e-01 0.0417 0.06 0.829 Mono L1
ENSG00000162512 SDC3 -148202 sc-eQTL 2.68e-01 -0.128 0.115 0.829 Mono L1
ENSG00000162517 PEF1 -884340 sc-eQTL 7.59e-01 -0.0249 0.0809 0.829 Mono L1
ENSG00000168528 SERINC2 -649009 sc-eQTL 9.57e-01 -0.00663 0.124 0.829 Mono L1
ENSG00000284543 LINC01226 -745670 sc-eQTL 6.66e-01 0.0471 0.109 0.829 Mono L1
ENSG00000287510 AL137857.1 28863 sc-eQTL 6.45e-01 -0.044 0.0953 0.829 Mono L1
ENSG00000060688 SNRNP40 -536232 sc-eQTL 4.42e-01 -0.0887 0.115 0.828 NK L1
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 3.37e-01 -0.0759 0.0788 0.828 NK L1
ENSG00000134644 PUM1 -305435 sc-eQTL 3.62e-01 -0.0756 0.0827 0.828 NK L1
ENSG00000162511 LAPTM5 2782 sc-eQTL 3.28e-06 0.433 0.0906 0.828 NK L1
ENSG00000162517 PEF1 -884340 sc-eQTL 9.14e-02 0.117 0.0692 0.828 NK L1
ENSG00000186056 MATN1-AS1 42052 sc-eQTL 9.26e-01 -0.00999 0.107 0.828 NK L1
ENSG00000287510 AL137857.1 28863 sc-eQTL 5.28e-01 0.0625 0.0989 0.828 NK L1
ENSG00000060688 SNRNP40 -536232 sc-eQTL 2.69e-01 0.0996 0.0898 0.829 Other_T L1
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 4.28e-01 0.0763 0.0961 0.829 Other_T L1
ENSG00000134644 PUM1 -305435 sc-eQTL 3.23e-01 0.0856 0.0864 0.829 Other_T L1
ENSG00000162511 LAPTM5 2782 sc-eQTL 3.41e-01 -0.0676 0.0708 0.829 Other_T L1
ENSG00000162517 PEF1 -884340 sc-eQTL 5.65e-02 0.18 0.0939 0.829 Other_T L1
ENSG00000186056 MATN1-AS1 42052 sc-eQTL 2.32e-02 -0.263 0.115 0.829 Other_T L1
ENSG00000287510 AL137857.1 28863 sc-eQTL 9.29e-01 -0.0108 0.121 0.829 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -536232 sc-eQTL 5.48e-01 0.0823 0.137 0.827 B_Activated L2
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 3.39e-01 -0.132 0.138 0.827 B_Activated L2
ENSG00000134644 PUM1 -305435 sc-eQTL 1.90e-01 -0.168 0.128 0.827 B_Activated L2
ENSG00000162510 MATN1 36971 sc-eQTL 5.69e-01 -0.0639 0.112 0.827 B_Activated L2
ENSG00000162511 LAPTM5 2782 sc-eQTL 1.14e-01 -0.123 0.0776 0.827 B_Activated L2
ENSG00000162517 PEF1 -884340 sc-eQTL 2.27e-01 -0.161 0.132 0.827 B_Activated L2
ENSG00000186056 MATN1-AS1 42052 sc-eQTL 6.90e-02 -0.229 0.125 0.827 B_Activated L2
ENSG00000287510 AL137857.1 28863 sc-eQTL 6.09e-02 -0.209 0.111 0.827 B_Activated L2
ENSG00000060688 SNRNP40 -536232 sc-eQTL 8.72e-01 0.0206 0.128 0.83 B_Intermediate L2
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 6.48e-01 -0.0486 0.106 0.83 B_Intermediate L2
ENSG00000134644 PUM1 -305435 sc-eQTL 2.71e-02 -0.221 0.0992 0.83 B_Intermediate L2
ENSG00000162510 MATN1 36971 sc-eQTL 1.09e-01 -0.167 0.104 0.83 B_Intermediate L2
ENSG00000162511 LAPTM5 2782 sc-eQTL 7.02e-02 -0.116 0.0636 0.83 B_Intermediate L2
ENSG00000162517 PEF1 -884340 sc-eQTL 7.81e-01 -0.0332 0.119 0.83 B_Intermediate L2
ENSG00000186056 MATN1-AS1 42052 sc-eQTL 6.34e-01 0.0429 0.09 0.83 B_Intermediate L2
ENSG00000287510 AL137857.1 28863 sc-eQTL 3.14e-01 -0.101 0.1 0.83 B_Intermediate L2
ENSG00000060688 SNRNP40 -536232 sc-eQTL 3.57e-01 0.116 0.125 0.828 B_Memory L2
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 8.59e-01 0.0206 0.116 0.828 B_Memory L2
ENSG00000134644 PUM1 -305435 sc-eQTL 6.15e-01 -0.0507 0.101 0.828 B_Memory L2
ENSG00000162510 MATN1 36971 sc-eQTL 6.22e-01 -0.0476 0.0963 0.828 B_Memory L2
ENSG00000162511 LAPTM5 2782 sc-eQTL 2.82e-01 -0.0919 0.0852 0.828 B_Memory L2
ENSG00000162517 PEF1 -884340 sc-eQTL 2.19e-02 -0.26 0.113 0.828 B_Memory L2
ENSG00000186056 MATN1-AS1 42052 sc-eQTL 5.40e-01 -0.0599 0.0977 0.828 B_Memory L2
ENSG00000287510 AL137857.1 28863 sc-eQTL 8.98e-01 0.0147 0.115 0.828 B_Memory L2
ENSG00000060688 SNRNP40 -536232 sc-eQTL 2.99e-01 0.12 0.115 0.829 B_Naive1 L2
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 8.69e-01 0.0164 0.0994 0.829 B_Naive1 L2
ENSG00000134644 PUM1 -305435 sc-eQTL 6.42e-01 0.0408 0.0876 0.829 B_Naive1 L2
ENSG00000162510 MATN1 36971 sc-eQTL 3.17e-01 0.0891 0.0887 0.829 B_Naive1 L2
ENSG00000162511 LAPTM5 2782 sc-eQTL 5.85e-01 0.0324 0.0594 0.829 B_Naive1 L2
ENSG00000162517 PEF1 -884340 sc-eQTL 7.52e-01 0.0331 0.105 0.829 B_Naive1 L2
ENSG00000186056 MATN1-AS1 42052 sc-eQTL 7.89e-02 -0.137 0.0775 0.829 B_Naive1 L2
ENSG00000287510 AL137857.1 28863 sc-eQTL 3.74e-02 -0.2 0.0954 0.829 B_Naive1 L2
ENSG00000060688 SNRNP40 -536232 sc-eQTL 2.64e-01 -0.136 0.121 0.828 B_Naive2 L2
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 5.99e-01 -0.0527 0.1 0.828 B_Naive2 L2
ENSG00000134644 PUM1 -305435 sc-eQTL 9.90e-01 0.00126 0.0979 0.828 B_Naive2 L2
ENSG00000162510 MATN1 36971 sc-eQTL 8.53e-01 0.0174 0.094 0.828 B_Naive2 L2
ENSG00000162511 LAPTM5 2782 sc-eQTL 6.19e-01 -0.0318 0.0638 0.828 B_Naive2 L2
ENSG00000162517 PEF1 -884340 sc-eQTL 6.31e-01 0.0558 0.116 0.828 B_Naive2 L2
ENSG00000186056 MATN1-AS1 42052 sc-eQTL 8.84e-02 -0.158 0.0923 0.828 B_Naive2 L2
ENSG00000287510 AL137857.1 28863 sc-eQTL 4.58e-01 -0.0745 0.1 0.828 B_Naive2 L2
ENSG00000060688 SNRNP40 -536232 sc-eQTL 8.66e-02 -0.211 0.123 0.823 CD4_CTL L2
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 8.13e-01 0.0287 0.121 0.823 CD4_CTL L2
ENSG00000134644 PUM1 -305435 sc-eQTL 6.99e-02 -0.215 0.118 0.823 CD4_CTL L2
ENSG00000162511 LAPTM5 2782 sc-eQTL 2.35e-01 0.126 0.106 0.823 CD4_CTL L2
ENSG00000162517 PEF1 -884340 sc-eQTL 5.43e-01 -0.0663 0.109 0.823 CD4_CTL L2
ENSG00000186056 MATN1-AS1 42052 sc-eQTL 8.47e-01 -0.0224 0.116 0.823 CD4_CTL L2
ENSG00000287510 AL137857.1 28863 sc-eQTL 4.13e-01 0.0839 0.102 0.823 CD4_CTL L2
ENSG00000060688 SNRNP40 -536232 sc-eQTL 3.00e-01 -0.101 0.0976 0.829 CD4_Naive L2
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 5.07e-01 0.0576 0.0867 0.829 CD4_Naive L2
ENSG00000134644 PUM1 -305435 sc-eQTL 9.35e-01 0.00564 0.0693 0.829 CD4_Naive L2
ENSG00000162511 LAPTM5 2782 sc-eQTL 2.53e-01 -0.0847 0.074 0.829 CD4_Naive L2
ENSG00000162517 PEF1 -884340 sc-eQTL 1.60e-01 -0.114 0.081 0.829 CD4_Naive L2
ENSG00000186056 MATN1-AS1 42052 sc-eQTL 3.06e-01 -0.0772 0.0751 0.829 CD4_Naive L2
ENSG00000287510 AL137857.1 28863 sc-eQTL 5.04e-01 0.0578 0.0864 0.829 CD4_Naive L2
ENSG00000060688 SNRNP40 -536232 sc-eQTL 5.76e-01 0.0687 0.123 0.829 CD4_TCM L2
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 5.59e-01 -0.0579 0.0989 0.829 CD4_TCM L2
ENSG00000134644 PUM1 -305435 sc-eQTL 5.59e-02 0.167 0.0869 0.829 CD4_TCM L2
ENSG00000162511 LAPTM5 2782 sc-eQTL 8.53e-01 0.0135 0.0727 0.829 CD4_TCM L2
ENSG00000162517 PEF1 -884340 sc-eQTL 7.86e-01 -0.0265 0.0974 0.829 CD4_TCM L2
ENSG00000186056 MATN1-AS1 42052 sc-eQTL 6.62e-01 0.0404 0.0922 0.829 CD4_TCM L2
ENSG00000287510 AL137857.1 28863 sc-eQTL 7.16e-01 -0.0374 0.103 0.829 CD4_TCM L2
ENSG00000060688 SNRNP40 -536232 sc-eQTL 3.22e-01 0.12 0.121 0.829 CD4_TEM L2
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 1.69e-01 -0.159 0.115 0.829 CD4_TEM L2
ENSG00000134644 PUM1 -305435 sc-eQTL 9.72e-01 -0.00338 0.0961 0.829 CD4_TEM L2
ENSG00000162511 LAPTM5 2782 sc-eQTL 7.05e-01 -0.0368 0.0972 0.829 CD4_TEM L2
ENSG00000162517 PEF1 -884340 sc-eQTL 6.69e-01 0.0465 0.109 0.829 CD4_TEM L2
ENSG00000186056 MATN1-AS1 42052 sc-eQTL 6.51e-01 -0.0515 0.114 0.829 CD4_TEM L2
ENSG00000287510 AL137857.1 28863 sc-eQTL 6.88e-02 0.203 0.111 0.829 CD4_TEM L2
ENSG00000060688 SNRNP40 -536232 sc-eQTL 3.11e-01 -0.134 0.132 0.829 CD8_CTL L2
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 8.61e-01 0.0177 0.101 0.829 CD8_CTL L2
ENSG00000134644 PUM1 -305435 sc-eQTL 2.43e-01 0.115 0.098 0.829 CD8_CTL L2
ENSG00000162511 LAPTM5 2782 sc-eQTL 8.59e-03 0.284 0.107 0.829 CD8_CTL L2
ENSG00000162517 PEF1 -884340 sc-eQTL 6.32e-01 -0.0454 0.0947 0.829 CD8_CTL L2
ENSG00000186056 MATN1-AS1 42052 sc-eQTL 6.32e-01 -0.0548 0.114 0.829 CD8_CTL L2
ENSG00000287510 AL137857.1 28863 sc-eQTL 5.09e-01 0.0711 0.108 0.829 CD8_CTL L2
ENSG00000060688 SNRNP40 -536232 sc-eQTL 4.93e-01 -0.0824 0.12 0.829 CD8_Naive L2
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 5.38e-01 -0.0638 0.103 0.829 CD8_Naive L2
ENSG00000134644 PUM1 -305435 sc-eQTL 1.06e-01 -0.135 0.0828 0.829 CD8_Naive L2
ENSG00000162511 LAPTM5 2782 sc-eQTL 3.43e-01 -0.0757 0.0797 0.829 CD8_Naive L2
ENSG00000162517 PEF1 -884340 sc-eQTL 3.42e-01 -0.105 0.111 0.829 CD8_Naive L2
ENSG00000186056 MATN1-AS1 42052 sc-eQTL 3.77e-01 -0.088 0.0995 0.829 CD8_Naive L2
ENSG00000287510 AL137857.1 28863 sc-eQTL 2.22e-01 -0.132 0.108 0.829 CD8_Naive L2
ENSG00000060688 SNRNP40 -536232 sc-eQTL 7.18e-01 -0.0492 0.136 0.826 CD8_TCM L2
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 6.32e-02 -0.231 0.123 0.826 CD8_TCM L2
ENSG00000134644 PUM1 -305435 sc-eQTL 2.35e-02 0.264 0.115 0.826 CD8_TCM L2
ENSG00000162511 LAPTM5 2782 sc-eQTL 8.84e-01 0.0179 0.122 0.826 CD8_TCM L2
ENSG00000162517 PEF1 -884340 sc-eQTL 4.87e-01 -0.087 0.125 0.826 CD8_TCM L2
ENSG00000186056 MATN1-AS1 42052 sc-eQTL 6.11e-01 0.0578 0.113 0.826 CD8_TCM L2
ENSG00000287510 AL137857.1 28863 sc-eQTL 4.76e-01 0.0818 0.114 0.826 CD8_TCM L2
ENSG00000060688 SNRNP40 -536232 sc-eQTL 7.64e-01 -0.0387 0.128 0.829 CD8_TEM L2
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 9.77e-01 0.00361 0.123 0.829 CD8_TEM L2
ENSG00000134644 PUM1 -305435 sc-eQTL 1.31e-01 0.19 0.125 0.829 CD8_TEM L2
ENSG00000162511 LAPTM5 2782 sc-eQTL 5.67e-01 -0.0678 0.118 0.829 CD8_TEM L2
ENSG00000162517 PEF1 -884340 sc-eQTL 4.98e-01 0.0755 0.111 0.829 CD8_TEM L2
ENSG00000186056 MATN1-AS1 42052 sc-eQTL 1.54e-01 -0.175 0.122 0.829 CD8_TEM L2
ENSG00000287510 AL137857.1 28863 sc-eQTL 1.43e-02 -0.271 0.109 0.829 CD8_TEM L2
ENSG00000060688 SNRNP40 -536232 sc-eQTL 4.71e-01 0.0924 0.128 0.827 MAIT L2
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 4.95e-01 0.0776 0.113 0.827 MAIT L2
ENSG00000134644 PUM1 -305435 sc-eQTL 4.00e-01 0.0918 0.109 0.827 MAIT L2
ENSG00000162511 LAPTM5 2782 sc-eQTL 5.00e-01 -0.0693 0.103 0.827 MAIT L2
ENSG00000162517 PEF1 -884340 sc-eQTL 2.99e-01 0.117 0.113 0.827 MAIT L2
ENSG00000186056 MATN1-AS1 42052 sc-eQTL 8.53e-02 -0.196 0.114 0.827 MAIT L2
ENSG00000287510 AL137857.1 28863 sc-eQTL 2.04e-01 0.15 0.117 0.827 MAIT L2
ENSG00000060688 SNRNP40 -536232 sc-eQTL 4.72e-01 0.0933 0.13 0.829 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 1.32e-01 -0.165 0.109 0.829 NK_CD56bright L2
ENSG00000134644 PUM1 -305435 sc-eQTL 9.27e-01 -0.0106 0.115 0.829 NK_CD56bright L2
ENSG00000162511 LAPTM5 2782 sc-eQTL 8.81e-05 0.438 0.109 0.829 NK_CD56bright L2
ENSG00000162517 PEF1 -884340 sc-eQTL 3.90e-01 0.0949 0.11 0.829 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 42052 sc-eQTL 1.66e-01 -0.158 0.114 0.829 NK_CD56bright L2
ENSG00000287510 AL137857.1 28863 sc-eQTL 8.60e-01 -0.0199 0.113 0.829 NK_CD56bright L2
ENSG00000060688 SNRNP40 -536232 sc-eQTL 5.94e-01 0.0648 0.122 0.828 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 5.37e-01 -0.0556 0.0899 0.828 NK_CD56dim L2
ENSG00000134644 PUM1 -305435 sc-eQTL 7.65e-01 -0.0277 0.0923 0.828 NK_CD56dim L2
ENSG00000162511 LAPTM5 2782 sc-eQTL 1.19e-04 0.373 0.095 0.828 NK_CD56dim L2
ENSG00000162517 PEF1 -884340 sc-eQTL 8.82e-01 0.013 0.0876 0.828 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 42052 sc-eQTL 8.91e-01 -0.0169 0.123 0.828 NK_CD56dim L2
ENSG00000287510 AL137857.1 28863 sc-eQTL 8.29e-01 0.022 0.102 0.828 NK_CD56dim L2
ENSG00000060688 SNRNP40 -536232 sc-eQTL 1.39e-01 -0.191 0.128 0.829 NK_HLA L2
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 7.24e-01 0.0408 0.115 0.829 NK_HLA L2
ENSG00000134644 PUM1 -305435 sc-eQTL 8.96e-02 0.19 0.111 0.829 NK_HLA L2
ENSG00000162511 LAPTM5 2782 sc-eQTL 4.28e-03 0.303 0.105 0.829 NK_HLA L2
ENSG00000162517 PEF1 -884340 sc-eQTL 6.21e-01 -0.0598 0.121 0.829 NK_HLA L2
ENSG00000186056 MATN1-AS1 42052 sc-eQTL 5.72e-01 0.0645 0.114 0.829 NK_HLA L2
ENSG00000287510 AL137857.1 28863 sc-eQTL 5.02e-01 -0.0741 0.11 0.829 NK_HLA L2
ENSG00000060688 SNRNP40 -536232 sc-eQTL 2.51e-01 -0.137 0.119 0.828 NK_cytokine L2
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 2.38e-01 -0.11 0.0927 0.828 NK_cytokine L2
ENSG00000134644 PUM1 -305435 sc-eQTL 2.69e-01 -0.111 0.1 0.828 NK_cytokine L2
ENSG00000162511 LAPTM5 2782 sc-eQTL 6.73e-04 0.372 0.108 0.828 NK_cytokine L2
ENSG00000162517 PEF1 -884340 sc-eQTL 4.15e-02 0.192 0.0934 0.828 NK_cytokine L2
ENSG00000186056 MATN1-AS1 42052 sc-eQTL 9.99e-01 -9.43e-05 0.117 0.828 NK_cytokine L2
ENSG00000287510 AL137857.1 28863 sc-eQTL 9.66e-01 -0.00472 0.109 0.828 NK_cytokine L2
ENSG00000060688 SNRNP40 -536232 sc-eQTL 4.93e-01 -0.0937 0.136 0.822 PB L2
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 6.35e-01 -0.0754 0.158 0.822 PB L2
ENSG00000134644 PUM1 -305435 sc-eQTL 1.35e-01 0.205 0.136 0.822 PB L2
ENSG00000162510 MATN1 36971 sc-eQTL 7.97e-01 -0.033 0.128 0.822 PB L2
ENSG00000162511 LAPTM5 2782 sc-eQTL 2.05e-01 0.116 0.091 0.822 PB L2
ENSG00000162517 PEF1 -884340 sc-eQTL 5.19e-01 0.0911 0.141 0.822 PB L2
ENSG00000186056 MATN1-AS1 42052 sc-eQTL 6.58e-01 -0.0557 0.125 0.822 PB L2
ENSG00000287510 AL137857.1 28863 sc-eQTL 6.74e-01 0.0564 0.133 0.822 PB L2
ENSG00000060688 SNRNP40 -536232 sc-eQTL 7.28e-01 0.0325 0.0934 0.826 Pro_T L2
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 6.55e-01 -0.053 0.119 0.826 Pro_T L2
ENSG00000134644 PUM1 -305435 sc-eQTL 7.53e-01 0.0348 0.111 0.826 Pro_T L2
ENSG00000162511 LAPTM5 2782 sc-eQTL 8.88e-01 0.0112 0.0794 0.826 Pro_T L2
ENSG00000162517 PEF1 -884340 sc-eQTL 3.35e-01 -0.112 0.116 0.826 Pro_T L2
ENSG00000186056 MATN1-AS1 42052 sc-eQTL 8.85e-01 -0.016 0.111 0.826 Pro_T L2
ENSG00000287510 AL137857.1 28863 sc-eQTL 2.94e-01 -0.107 0.102 0.826 Pro_T L2
ENSG00000060688 SNRNP40 -536232 sc-eQTL 5.22e-02 -0.239 0.122 0.829 Treg L2
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 8.04e-01 0.0298 0.12 0.829 Treg L2
ENSG00000134644 PUM1 -305435 sc-eQTL 8.30e-01 0.0205 0.0957 0.829 Treg L2
ENSG00000162511 LAPTM5 2782 sc-eQTL 1.75e-01 0.148 0.109 0.829 Treg L2
ENSG00000162517 PEF1 -884340 sc-eQTL 7.00e-01 0.0456 0.118 0.829 Treg L2
ENSG00000186056 MATN1-AS1 42052 sc-eQTL 9.42e-01 0.00816 0.112 0.829 Treg L2
ENSG00000287510 AL137857.1 28863 sc-eQTL 8.72e-01 -0.018 0.111 0.829 Treg L2
ENSG00000060688 SNRNP40 -536232 sc-eQTL 9.59e-01 -0.00669 0.129 0.837 cDC L2
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 2.20e-01 -0.171 0.139 0.837 cDC L2
ENSG00000134644 PUM1 -305435 sc-eQTL 5.46e-01 -0.0726 0.12 0.837 cDC L2
ENSG00000162511 LAPTM5 2782 sc-eQTL 3.58e-01 -0.0773 0.084 0.837 cDC L2
ENSG00000162517 PEF1 -884340 sc-eQTL 3.30e-01 0.119 0.122 0.837 cDC L2
ENSG00000168528 SERINC2 -649009 sc-eQTL 6.64e-01 0.047 0.108 0.837 cDC L2
ENSG00000284543 LINC01226 -745670 sc-eQTL 2.54e-02 -0.236 0.105 0.837 cDC L2
ENSG00000287510 AL137857.1 28863 sc-eQTL 8.97e-01 -0.0148 0.114 0.837 cDC L2
ENSG00000060688 SNRNP40 -536232 sc-eQTL 5.06e-01 0.0656 0.0983 0.829 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 9.96e-01 -0.000523 0.11 0.829 cMono_IL1B L2
ENSG00000134644 PUM1 -305435 sc-eQTL 3.12e-01 -0.075 0.0741 0.829 cMono_IL1B L2
ENSG00000162511 LAPTM5 2782 sc-eQTL 3.95e-01 0.0554 0.0651 0.829 cMono_IL1B L2
ENSG00000162512 SDC3 -148202 sc-eQTL 1.57e-01 -0.174 0.122 0.829 cMono_IL1B L2
ENSG00000162517 PEF1 -884340 sc-eQTL 9.14e-01 0.0109 0.1 0.829 cMono_IL1B L2
ENSG00000168528 SERINC2 -649009 sc-eQTL 7.55e-01 -0.0388 0.124 0.829 cMono_IL1B L2
ENSG00000284543 LINC01226 -745670 sc-eQTL 3.09e-01 0.112 0.11 0.829 cMono_IL1B L2
ENSG00000287510 AL137857.1 28863 sc-eQTL 8.87e-01 -0.0146 0.102 0.829 cMono_IL1B L2
ENSG00000060688 SNRNP40 -536232 sc-eQTL 6.11e-01 0.0526 0.103 0.829 cMono_S100A L2
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 5.25e-01 0.0777 0.122 0.829 cMono_S100A L2
ENSG00000134644 PUM1 -305435 sc-eQTL 1.44e-02 -0.215 0.0871 0.829 cMono_S100A L2
ENSG00000162511 LAPTM5 2782 sc-eQTL 7.38e-01 -0.0227 0.0679 0.829 cMono_S100A L2
ENSG00000162512 SDC3 -148202 sc-eQTL 6.24e-01 -0.0575 0.117 0.829 cMono_S100A L2
ENSG00000162517 PEF1 -884340 sc-eQTL 3.87e-01 -0.0915 0.106 0.829 cMono_S100A L2
ENSG00000168528 SERINC2 -649009 sc-eQTL 7.07e-01 -0.0466 0.124 0.829 cMono_S100A L2
ENSG00000284543 LINC01226 -745670 sc-eQTL 8.77e-01 -0.0157 0.101 0.829 cMono_S100A L2
ENSG00000287510 AL137857.1 28863 sc-eQTL 8.60e-01 -0.0179 0.101 0.829 cMono_S100A L2
ENSG00000060688 SNRNP40 -536232 sc-eQTL 6.89e-01 0.0584 0.146 0.827 gdT L2
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 1.42e-02 0.305 0.123 0.827 gdT L2
ENSG00000134644 PUM1 -305435 sc-eQTL 6.91e-01 -0.0513 0.129 0.827 gdT L2
ENSG00000162511 LAPTM5 2782 sc-eQTL 5.37e-01 0.0867 0.14 0.827 gdT L2
ENSG00000162517 PEF1 -884340 sc-eQTL 2.44e-01 -0.15 0.128 0.827 gdT L2
ENSG00000186056 MATN1-AS1 42052 sc-eQTL 9.17e-01 0.0135 0.13 0.827 gdT L2
ENSG00000287510 AL137857.1 28863 sc-eQTL 7.85e-01 0.0344 0.126 0.827 gdT L2
ENSG00000060688 SNRNP40 -536232 sc-eQTL 8.27e-01 -0.0256 0.117 0.833 intMono L2
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 7.31e-01 -0.0432 0.125 0.833 intMono L2
ENSG00000134644 PUM1 -305435 sc-eQTL 7.91e-01 0.0283 0.106 0.833 intMono L2
ENSG00000162511 LAPTM5 2782 sc-eQTL 6.39e-01 0.0392 0.0835 0.833 intMono L2
ENSG00000162512 SDC3 -148202 sc-eQTL 7.50e-01 -0.0365 0.114 0.833 intMono L2
ENSG00000162517 PEF1 -884340 sc-eQTL 4.37e-01 0.0935 0.12 0.833 intMono L2
ENSG00000168528 SERINC2 -649009 sc-eQTL 7.67e-01 0.0355 0.12 0.833 intMono L2
ENSG00000284543 LINC01226 -745670 sc-eQTL 2.48e-01 -0.131 0.113 0.833 intMono L2
ENSG00000287510 AL137857.1 28863 sc-eQTL 7.06e-01 -0.0429 0.113 0.833 intMono L2
ENSG00000060688 SNRNP40 -536232 sc-eQTL 8.22e-01 -0.0247 0.11 0.828 ncMono L2
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 9.19e-01 0.0118 0.117 0.828 ncMono L2
ENSG00000134644 PUM1 -305435 sc-eQTL 3.54e-01 -0.0886 0.0952 0.828 ncMono L2
ENSG00000162511 LAPTM5 2782 sc-eQTL 1.80e-02 0.204 0.0854 0.828 ncMono L2
ENSG00000162512 SDC3 -148202 sc-eQTL 8.76e-01 -0.0152 0.0972 0.828 ncMono L2
ENSG00000162517 PEF1 -884340 sc-eQTL 1.18e-01 -0.174 0.111 0.828 ncMono L2
ENSG00000168528 SERINC2 -649009 sc-eQTL 9.93e-01 -0.000878 0.106 0.828 ncMono L2
ENSG00000284543 LINC01226 -745670 sc-eQTL 4.94e-01 -0.0725 0.106 0.828 ncMono L2
ENSG00000287510 AL137857.1 28863 sc-eQTL 6.16e-01 -0.0552 0.11 0.828 ncMono L2
ENSG00000060688 SNRNP40 -536232 sc-eQTL 4.07e-01 0.106 0.128 0.825 pDC L2
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 4.44e-01 -0.108 0.14 0.825 pDC L2
ENSG00000134644 PUM1 -305435 sc-eQTL 1.71e-01 -0.159 0.116 0.825 pDC L2
ENSG00000162511 LAPTM5 2782 sc-eQTL 1.06e-01 0.175 0.107 0.825 pDC L2
ENSG00000162517 PEF1 -884340 sc-eQTL 9.42e-01 -0.0101 0.14 0.825 pDC L2
ENSG00000168528 SERINC2 -649009 sc-eQTL 9.01e-02 0.222 0.13 0.825 pDC L2
ENSG00000284543 LINC01226 -745670 sc-eQTL 8.93e-01 -0.0137 0.102 0.825 pDC L2
ENSG00000287510 AL137857.1 28863 sc-eQTL 3.21e-01 -0.119 0.119 0.825 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -536232 sc-eQTL 9.27e-01 0.0114 0.123 0.829 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 6.82e-01 -0.042 0.102 0.829 B_Memory LOneK1K
ENSG00000134644 PUM1 -305435 sc-eQTL 2.52e-02 -0.202 0.0897 0.829 B_Memory LOneK1K
ENSG00000162510 MATN1 36971 sc-eQTL 4.03e-01 -0.0865 0.103 0.829 B_Memory LOneK1K
ENSG00000162511 LAPTM5 2782 sc-eQTL 7.37e-02 -0.116 0.0645 0.829 B_Memory LOneK1K
ENSG00000162517 PEF1 -884340 sc-eQTL 2.26e-01 -0.13 0.107 0.829 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 42052 sc-eQTL 5.16e-01 -0.0559 0.0859 0.829 B_Memory LOneK1K
ENSG00000287510 AL137857.1 28863 sc-eQTL 2.97e-01 -0.0977 0.0935 0.829 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -536232 sc-eQTL 9.77e-01 -0.00329 0.112 0.829 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 9.12e-01 0.00971 0.0882 0.829 B_Naive LOneK1K
ENSG00000134644 PUM1 -305435 sc-eQTL 4.74e-01 0.0598 0.0834 0.829 B_Naive LOneK1K
ENSG00000162510 MATN1 36971 sc-eQTL 4.38e-01 0.0624 0.0802 0.829 B_Naive LOneK1K
ENSG00000162511 LAPTM5 2782 sc-eQTL 9.75e-01 0.00181 0.0566 0.829 B_Naive LOneK1K
ENSG00000162517 PEF1 -884340 sc-eQTL 5.71e-01 0.0586 0.103 0.829 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 42052 sc-eQTL 2.12e-02 -0.168 0.0721 0.829 B_Naive LOneK1K
ENSG00000287510 AL137857.1 28863 sc-eQTL 6.17e-02 -0.162 0.0861 0.829 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -536232 sc-eQTL 3.11e-01 0.0952 0.0938 0.829 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 5.34e-01 0.0663 0.106 0.829 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -305435 sc-eQTL 4.89e-02 -0.133 0.0673 0.829 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 2782 sc-eQTL 5.12e-01 0.0391 0.0596 0.829 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -148202 sc-eQTL 1.24e-01 -0.187 0.121 0.829 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -884340 sc-eQTL 6.41e-01 -0.0399 0.0856 0.829 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -649009 sc-eQTL 7.30e-01 -0.0433 0.125 0.829 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -745670 sc-eQTL 3.11e-01 0.104 0.102 0.829 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 28863 sc-eQTL 8.52e-01 -0.018 0.0962 0.829 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -536232 sc-eQTL 7.59e-01 0.0315 0.102 0.828 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 9.58e-01 -0.00584 0.112 0.828 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -305435 sc-eQTL 7.55e-01 -0.0287 0.0919 0.828 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 2782 sc-eQTL 1.43e-01 0.107 0.0731 0.828 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -148202 sc-eQTL 6.59e-01 0.0474 0.107 0.828 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -884340 sc-eQTL 7.92e-01 -0.0257 0.0975 0.828 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -649009 sc-eQTL 5.90e-01 0.06 0.111 0.828 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -745670 sc-eQTL 4.80e-01 -0.0747 0.106 0.828 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 28863 sc-eQTL 8.27e-01 -0.0232 0.106 0.828 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -536232 sc-eQTL 4.16e-01 -0.0944 0.116 0.828 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -536426 sc-eQTL 4.13e-01 -0.0649 0.0791 0.828 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -305435 sc-eQTL 6.70e-01 -0.0371 0.0867 0.828 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 2782 sc-eQTL 1.23e-05 0.415 0.0926 0.828 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -884340 sc-eQTL 1.18e-01 0.115 0.0732 0.828 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 42052 sc-eQTL 8.22e-01 0.0253 0.112 0.828 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 28863 sc-eQTL 7.21e-01 0.0345 0.0965 0.828 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162511 LAPTM5 2782 eQTL 1.37e-22 0.116 0.0115 0.00361 0.00534 0.194
ENSG00000162512 SDC3 -148202 eQTL 3.51e-05 -0.123 0.0296 0.0 0.0 0.194
ENSG00000186056 MATN1-AS1 42052 eQTL 8.08e-04 -0.051 0.0152 0.00118 0.0 0.194

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162511 LAPTM5 2782 4.04e-05 3.25e-05 6.4e-06 1.55e-05 5.76e-06 1.45e-05 4.51e-05 4.44e-06 3.05e-05 1.45e-05 3.66e-05 1.7e-05 4.6e-05 1.36e-05 7.03e-06 1.86e-05 1.8e-05 2.61e-05 7.63e-06 6.6e-06 1.46e-05 3.27e-05 3.27e-05 8.66e-06 4.44e-05 8.09e-06 1.35e-05 1.21e-05 3.31e-05 2.41e-05 1.98e-05 1.63e-06 2.56e-06 7.07e-06 1.14e-05 5.68e-06 2.93e-06 3.17e-06 4.84e-06 3.17e-06 1.74e-06 3.71e-05 3.98e-06 3.6e-07 2.45e-06 3.81e-06 4.09e-06 1.55e-06 1.57e-06
ENSG00000162512 SDC3 -148202 5.86e-05 5.83e-06 1.11e-06 3.49e-06 1.47e-06 4e-06 7.6e-06 6.39e-07 4.49e-06 3.17e-06 5.17e-06 3.37e-06 8.92e-06 2.24e-06 1.4e-06 3.93e-06 1.92e-06 4.99e-06 1.45e-06 1.28e-06 2.71e-06 7.65e-06 4.7e-06 1.39e-06 5.16e-06 1.67e-06 2.31e-06 1.77e-06 5.37e-06 4.29e-06 3.09e-06 9.86e-07 9.66e-07 2.43e-06 2.22e-06 9.58e-07 1.08e-06 4.4e-07 1.36e-06 7.35e-07 1.01e-06 6.66e-06 6.86e-07 8.96e-08 6.86e-07 1.2e-06 1.03e-06 7.5e-07 4.89e-07