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Genes within 1Mb (chr1:30757348:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -539440 sc-eQTL 9.30e-01 0.0092 0.105 0.829 B L1
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 9.85e-01 0.0016 0.0839 0.829 B L1
ENSG00000134644 PUM1 -308643 sc-eQTL 6.38e-01 -0.0332 0.0704 0.829 B L1
ENSG00000162510 MATN1 33763 sc-eQTL 7.62e-01 0.0224 0.074 0.829 B L1
ENSG00000162511 LAPTM5 -426 sc-eQTL 9.61e-01 -0.00283 0.058 0.829 B L1
ENSG00000162517 PEF1 -887548 sc-eQTL 4.28e-01 -0.0693 0.0873 0.829 B L1
ENSG00000186056 MATN1-AS1 38844 sc-eQTL 6.58e-02 -0.125 0.0674 0.829 B L1
ENSG00000287510 AL137857.1 25655 sc-eQTL 4.00e-02 -0.164 0.0796 0.829 B L1
ENSG00000060688 SNRNP40 -539440 sc-eQTL 4.45e-01 -0.071 0.0926 0.829 CD4T L1
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 9.90e-01 0.000934 0.0725 0.829 CD4T L1
ENSG00000134644 PUM1 -308643 sc-eQTL 4.02e-01 0.0541 0.0644 0.829 CD4T L1
ENSG00000162511 LAPTM5 -426 sc-eQTL 5.08e-01 -0.0474 0.0714 0.829 CD4T L1
ENSG00000162517 PEF1 -887548 sc-eQTL 3.12e-01 -0.0755 0.0746 0.829 CD4T L1
ENSG00000186056 MATN1-AS1 38844 sc-eQTL 3.92e-01 -0.0548 0.0639 0.829 CD4T L1
ENSG00000287510 AL137857.1 25655 sc-eQTL 3.70e-01 0.0688 0.0765 0.829 CD4T L1
ENSG00000060688 SNRNP40 -539440 sc-eQTL 3.38e-01 -0.116 0.121 0.829 CD8T L1
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 6.10e-01 0.0413 0.0807 0.829 CD8T L1
ENSG00000134644 PUM1 -308643 sc-eQTL 7.84e-01 -0.0195 0.0711 0.829 CD8T L1
ENSG00000162511 LAPTM5 -426 sc-eQTL 1.94e-01 0.0896 0.0688 0.829 CD8T L1
ENSG00000162517 PEF1 -887548 sc-eQTL 3.28e-01 -0.0833 0.0848 0.829 CD8T L1
ENSG00000186056 MATN1-AS1 38844 sc-eQTL 1.67e-01 -0.112 0.0806 0.829 CD8T L1
ENSG00000287510 AL137857.1 25655 sc-eQTL 4.63e-01 -0.0746 0.102 0.829 CD8T L1
ENSG00000060688 SNRNP40 -539440 sc-eQTL 7.36e-01 0.0372 0.11 0.831 DC L1
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 1.02e-01 -0.213 0.13 0.831 DC L1
ENSG00000134644 PUM1 -308643 sc-eQTL 6.79e-01 -0.0424 0.102 0.831 DC L1
ENSG00000162511 LAPTM5 -426 sc-eQTL 5.88e-01 0.0396 0.073 0.831 DC L1
ENSG00000162517 PEF1 -887548 sc-eQTL 4.33e-01 0.0929 0.118 0.831 DC L1
ENSG00000168528 SERINC2 -652217 sc-eQTL 3.14e-01 0.121 0.12 0.831 DC L1
ENSG00000284543 LINC01226 -748878 sc-eQTL 8.48e-01 0.0154 0.0798 0.831 DC L1
ENSG00000287510 AL137857.1 25655 sc-eQTL 4.26e-01 -0.0921 0.115 0.831 DC L1
ENSG00000060688 SNRNP40 -539440 sc-eQTL 3.62e-01 0.0748 0.0819 0.829 Mono L1
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 5.12e-01 0.0668 0.102 0.829 Mono L1
ENSG00000134644 PUM1 -308643 sc-eQTL 1.60e-01 -0.0916 0.0649 0.829 Mono L1
ENSG00000162511 LAPTM5 -426 sc-eQTL 4.99e-01 0.0406 0.0599 0.829 Mono L1
ENSG00000162512 SDC3 -151410 sc-eQTL 2.82e-01 -0.124 0.115 0.829 Mono L1
ENSG00000162517 PEF1 -887548 sc-eQTL 6.85e-01 -0.0328 0.0809 0.829 Mono L1
ENSG00000168528 SERINC2 -652217 sc-eQTL 8.77e-01 -0.0192 0.124 0.829 Mono L1
ENSG00000284543 LINC01226 -748878 sc-eQTL 8.05e-01 0.0269 0.109 0.829 Mono L1
ENSG00000287510 AL137857.1 25655 sc-eQTL 7.58e-01 -0.0294 0.0953 0.829 Mono L1
ENSG00000060688 SNRNP40 -539440 sc-eQTL 2.87e-01 -0.123 0.115 0.828 NK L1
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 3.78e-01 -0.0698 0.079 0.828 NK L1
ENSG00000134644 PUM1 -308643 sc-eQTL 2.94e-01 -0.0871 0.0828 0.828 NK L1
ENSG00000162511 LAPTM5 -426 sc-eQTL 8.37e-07 0.458 0.0902 0.828 NK L1
ENSG00000162517 PEF1 -887548 sc-eQTL 1.08e-01 0.112 0.0693 0.828 NK L1
ENSG00000186056 MATN1-AS1 38844 sc-eQTL 9.15e-01 -0.0115 0.107 0.828 NK L1
ENSG00000287510 AL137857.1 25655 sc-eQTL 4.41e-01 0.0765 0.099 0.828 NK L1
ENSG00000060688 SNRNP40 -539440 sc-eQTL 3.39e-01 0.0857 0.0894 0.829 Other_T L1
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 3.56e-01 0.0883 0.0956 0.829 Other_T L1
ENSG00000134644 PUM1 -308643 sc-eQTL 3.49e-01 0.0806 0.0859 0.829 Other_T L1
ENSG00000162511 LAPTM5 -426 sc-eQTL 3.85e-01 -0.0614 0.0704 0.829 Other_T L1
ENSG00000162517 PEF1 -887548 sc-eQTL 5.38e-02 0.181 0.0934 0.829 Other_T L1
ENSG00000186056 MATN1-AS1 38844 sc-eQTL 3.65e-02 -0.241 0.114 0.829 Other_T L1
ENSG00000287510 AL137857.1 25655 sc-eQTL 9.17e-01 -0.0126 0.12 0.829 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -539440 sc-eQTL 5.65e-01 0.0783 0.136 0.827 B_Activated L2
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 4.10e-01 -0.113 0.137 0.827 B_Activated L2
ENSG00000134644 PUM1 -308643 sc-eQTL 1.60e-01 -0.179 0.127 0.827 B_Activated L2
ENSG00000162510 MATN1 33763 sc-eQTL 5.93e-01 -0.0595 0.111 0.827 B_Activated L2
ENSG00000162511 LAPTM5 -426 sc-eQTL 1.24e-01 -0.119 0.0771 0.827 B_Activated L2
ENSG00000162517 PEF1 -887548 sc-eQTL 2.34e-01 -0.157 0.132 0.827 B_Activated L2
ENSG00000186056 MATN1-AS1 38844 sc-eQTL 1.09e-01 -0.201 0.124 0.827 B_Activated L2
ENSG00000287510 AL137857.1 25655 sc-eQTL 5.67e-02 -0.211 0.11 0.827 B_Activated L2
ENSG00000060688 SNRNP40 -539440 sc-eQTL 9.74e-01 0.0042 0.128 0.83 B_Intermediate L2
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 5.61e-01 -0.0621 0.107 0.83 B_Intermediate L2
ENSG00000134644 PUM1 -308643 sc-eQTL 4.36e-02 -0.203 0.0997 0.83 B_Intermediate L2
ENSG00000162510 MATN1 33763 sc-eQTL 1.65e-01 -0.145 0.104 0.83 B_Intermediate L2
ENSG00000162511 LAPTM5 -426 sc-eQTL 8.82e-02 -0.109 0.0639 0.83 B_Intermediate L2
ENSG00000162517 PEF1 -887548 sc-eQTL 8.28e-01 -0.026 0.119 0.83 B_Intermediate L2
ENSG00000186056 MATN1-AS1 38844 sc-eQTL 5.75e-01 0.0507 0.0902 0.83 B_Intermediate L2
ENSG00000287510 AL137857.1 25655 sc-eQTL 4.65e-01 -0.0738 0.101 0.83 B_Intermediate L2
ENSG00000060688 SNRNP40 -539440 sc-eQTL 3.06e-01 0.128 0.125 0.828 B_Memory L2
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 9.20e-01 0.0115 0.115 0.828 B_Memory L2
ENSG00000134644 PUM1 -308643 sc-eQTL 6.00e-01 -0.0527 0.1 0.828 B_Memory L2
ENSG00000162510 MATN1 33763 sc-eQTL 6.01e-01 -0.0501 0.0958 0.828 B_Memory L2
ENSG00000162511 LAPTM5 -426 sc-eQTL 3.82e-01 -0.0744 0.0848 0.828 B_Memory L2
ENSG00000162517 PEF1 -887548 sc-eQTL 4.35e-02 -0.228 0.112 0.828 B_Memory L2
ENSG00000186056 MATN1-AS1 38844 sc-eQTL 5.49e-01 -0.0583 0.0972 0.828 B_Memory L2
ENSG00000287510 AL137857.1 25655 sc-eQTL 9.83e-01 0.00238 0.114 0.828 B_Memory L2
ENSG00000060688 SNRNP40 -539440 sc-eQTL 2.53e-01 0.131 0.114 0.829 B_Naive1 L2
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 8.06e-01 0.0244 0.0991 0.829 B_Naive1 L2
ENSG00000134644 PUM1 -308643 sc-eQTL 5.79e-01 0.0485 0.0873 0.829 B_Naive1 L2
ENSG00000162510 MATN1 33763 sc-eQTL 3.51e-01 0.0828 0.0885 0.829 B_Naive1 L2
ENSG00000162511 LAPTM5 -426 sc-eQTL 7.11e-01 0.022 0.0592 0.829 B_Naive1 L2
ENSG00000162517 PEF1 -887548 sc-eQTL 8.58e-01 0.0187 0.104 0.829 B_Naive1 L2
ENSG00000186056 MATN1-AS1 38844 sc-eQTL 1.70e-01 -0.107 0.0775 0.829 B_Naive1 L2
ENSG00000287510 AL137857.1 25655 sc-eQTL 2.84e-02 -0.21 0.095 0.829 B_Naive1 L2
ENSG00000060688 SNRNP40 -539440 sc-eQTL 2.22e-01 -0.148 0.121 0.828 B_Naive2 L2
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 6.37e-01 -0.0473 0.0999 0.828 B_Naive2 L2
ENSG00000134644 PUM1 -308643 sc-eQTL 9.13e-01 -0.0107 0.0978 0.828 B_Naive2 L2
ENSG00000162510 MATN1 33763 sc-eQTL 6.80e-01 0.0388 0.0939 0.828 B_Naive2 L2
ENSG00000162511 LAPTM5 -426 sc-eQTL 4.71e-01 -0.046 0.0637 0.828 B_Naive2 L2
ENSG00000162517 PEF1 -887548 sc-eQTL 7.67e-01 0.0344 0.116 0.828 B_Naive2 L2
ENSG00000186056 MATN1-AS1 38844 sc-eQTL 6.70e-02 -0.17 0.0921 0.828 B_Naive2 L2
ENSG00000287510 AL137857.1 25655 sc-eQTL 5.91e-01 -0.054 0.1 0.828 B_Naive2 L2
ENSG00000060688 SNRNP40 -539440 sc-eQTL 4.80e-02 -0.243 0.122 0.825 CD4_CTL L2
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 7.00e-01 0.0467 0.121 0.825 CD4_CTL L2
ENSG00000134644 PUM1 -308643 sc-eQTL 1.13e-01 -0.188 0.118 0.825 CD4_CTL L2
ENSG00000162511 LAPTM5 -426 sc-eQTL 1.51e-01 0.152 0.105 0.825 CD4_CTL L2
ENSG00000162517 PEF1 -887548 sc-eQTL 6.32e-01 -0.0521 0.109 0.825 CD4_CTL L2
ENSG00000186056 MATN1-AS1 38844 sc-eQTL 9.95e-01 0.000675 0.116 0.825 CD4_CTL L2
ENSG00000287510 AL137857.1 25655 sc-eQTL 3.78e-01 0.0902 0.102 0.825 CD4_CTL L2
ENSG00000060688 SNRNP40 -539440 sc-eQTL 5.30e-01 -0.0612 0.0974 0.829 CD4_Naive L2
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 4.32e-01 0.068 0.0863 0.829 CD4_Naive L2
ENSG00000134644 PUM1 -308643 sc-eQTL 8.97e-01 0.00895 0.069 0.829 CD4_Naive L2
ENSG00000162511 LAPTM5 -426 sc-eQTL 2.20e-01 -0.0906 0.0736 0.829 CD4_Naive L2
ENSG00000162517 PEF1 -887548 sc-eQTL 8.23e-02 -0.14 0.0805 0.829 CD4_Naive L2
ENSG00000186056 MATN1-AS1 38844 sc-eQTL 2.62e-01 -0.0842 0.0748 0.829 CD4_Naive L2
ENSG00000287510 AL137857.1 25655 sc-eQTL 5.10e-01 0.0568 0.0861 0.829 CD4_Naive L2
ENSG00000060688 SNRNP40 -539440 sc-eQTL 8.07e-01 0.0299 0.122 0.829 CD4_TCM L2
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 7.90e-01 -0.0262 0.0985 0.829 CD4_TCM L2
ENSG00000134644 PUM1 -308643 sc-eQTL 5.35e-02 0.168 0.0865 0.829 CD4_TCM L2
ENSG00000162511 LAPTM5 -426 sc-eQTL 7.85e-01 0.0197 0.0724 0.829 CD4_TCM L2
ENSG00000162517 PEF1 -887548 sc-eQTL 6.46e-01 -0.0446 0.097 0.829 CD4_TCM L2
ENSG00000186056 MATN1-AS1 38844 sc-eQTL 4.00e-01 0.0774 0.0917 0.829 CD4_TCM L2
ENSG00000287510 AL137857.1 25655 sc-eQTL 7.24e-01 -0.0361 0.102 0.829 CD4_TCM L2
ENSG00000060688 SNRNP40 -539440 sc-eQTL 1.87e-01 0.16 0.121 0.829 CD4_TEM L2
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 2.32e-01 -0.138 0.115 0.829 CD4_TEM L2
ENSG00000134644 PUM1 -308643 sc-eQTL 8.89e-01 0.0135 0.0962 0.829 CD4_TEM L2
ENSG00000162511 LAPTM5 -426 sc-eQTL 6.48e-01 -0.0444 0.0972 0.829 CD4_TEM L2
ENSG00000162517 PEF1 -887548 sc-eQTL 5.75e-01 0.0611 0.109 0.829 CD4_TEM L2
ENSG00000186056 MATN1-AS1 38844 sc-eQTL 7.26e-01 -0.0399 0.114 0.829 CD4_TEM L2
ENSG00000287510 AL137857.1 25655 sc-eQTL 8.23e-02 0.194 0.111 0.829 CD4_TEM L2
ENSG00000060688 SNRNP40 -539440 sc-eQTL 1.47e-01 -0.191 0.131 0.829 CD8_CTL L2
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 7.47e-01 0.0327 0.101 0.829 CD8_CTL L2
ENSG00000134644 PUM1 -308643 sc-eQTL 4.13e-01 0.0804 0.098 0.829 CD8_CTL L2
ENSG00000162511 LAPTM5 -426 sc-eQTL 1.02e-02 0.277 0.107 0.829 CD8_CTL L2
ENSG00000162517 PEF1 -887548 sc-eQTL 6.40e-01 -0.0444 0.0946 0.829 CD8_CTL L2
ENSG00000186056 MATN1-AS1 38844 sc-eQTL 6.92e-01 -0.0454 0.114 0.829 CD8_CTL L2
ENSG00000287510 AL137857.1 25655 sc-eQTL 5.17e-01 0.0697 0.107 0.829 CD8_CTL L2
ENSG00000060688 SNRNP40 -539440 sc-eQTL 5.50e-01 -0.0717 0.12 0.829 CD8_Naive L2
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 6.72e-01 -0.0439 0.103 0.829 CD8_Naive L2
ENSG00000134644 PUM1 -308643 sc-eQTL 1.29e-01 -0.126 0.0828 0.829 CD8_Naive L2
ENSG00000162511 LAPTM5 -426 sc-eQTL 1.51e-01 -0.114 0.0794 0.829 CD8_Naive L2
ENSG00000162517 PEF1 -887548 sc-eQTL 4.37e-01 -0.0863 0.111 0.829 CD8_Naive L2
ENSG00000186056 MATN1-AS1 38844 sc-eQTL 2.90e-01 -0.105 0.0993 0.829 CD8_Naive L2
ENSG00000287510 AL137857.1 25655 sc-eQTL 2.62e-01 -0.121 0.108 0.829 CD8_Naive L2
ENSG00000060688 SNRNP40 -539440 sc-eQTL 6.73e-01 -0.0574 0.136 0.829 CD8_TCM L2
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 7.02e-02 -0.225 0.123 0.829 CD8_TCM L2
ENSG00000134644 PUM1 -308643 sc-eQTL 2.22e-02 0.266 0.115 0.829 CD8_TCM L2
ENSG00000162511 LAPTM5 -426 sc-eQTL 8.61e-01 0.0214 0.123 0.829 CD8_TCM L2
ENSG00000162517 PEF1 -887548 sc-eQTL 5.83e-01 -0.0688 0.125 0.829 CD8_TCM L2
ENSG00000186056 MATN1-AS1 38844 sc-eQTL 5.70e-01 0.0645 0.113 0.829 CD8_TCM L2
ENSG00000287510 AL137857.1 25655 sc-eQTL 4.47e-01 0.0872 0.114 0.829 CD8_TCM L2
ENSG00000060688 SNRNP40 -539440 sc-eQTL 8.75e-01 -0.0202 0.128 0.826 CD8_TEM L2
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 8.01e-01 0.031 0.123 0.826 CD8_TEM L2
ENSG00000134644 PUM1 -308643 sc-eQTL 1.86e-01 0.166 0.125 0.826 CD8_TEM L2
ENSG00000162511 LAPTM5 -426 sc-eQTL 3.91e-01 -0.101 0.118 0.826 CD8_TEM L2
ENSG00000162517 PEF1 -887548 sc-eQTL 7.26e-01 0.039 0.111 0.826 CD8_TEM L2
ENSG00000186056 MATN1-AS1 38844 sc-eQTL 8.29e-02 -0.212 0.122 0.826 CD8_TEM L2
ENSG00000287510 AL137857.1 25655 sc-eQTL 8.65e-03 -0.289 0.109 0.826 CD8_TEM L2
ENSG00000060688 SNRNP40 -539440 sc-eQTL 3.84e-01 0.111 0.127 0.827 MAIT L2
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 4.67e-01 0.0819 0.112 0.827 MAIT L2
ENSG00000134644 PUM1 -308643 sc-eQTL 4.05e-01 0.0899 0.108 0.827 MAIT L2
ENSG00000162511 LAPTM5 -426 sc-eQTL 4.12e-01 -0.0835 0.102 0.827 MAIT L2
ENSG00000162517 PEF1 -887548 sc-eQTL 3.67e-01 0.101 0.112 0.827 MAIT L2
ENSG00000186056 MATN1-AS1 38844 sc-eQTL 1.68e-01 -0.156 0.113 0.827 MAIT L2
ENSG00000287510 AL137857.1 25655 sc-eQTL 2.14e-01 0.145 0.116 0.827 MAIT L2
ENSG00000060688 SNRNP40 -539440 sc-eQTL 8.84e-01 0.0189 0.13 0.829 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 1.48e-01 -0.158 0.109 0.829 NK_CD56bright L2
ENSG00000134644 PUM1 -308643 sc-eQTL 8.89e-01 0.0161 0.115 0.829 NK_CD56bright L2
ENSG00000162511 LAPTM5 -426 sc-eQTL 1.64e-04 0.421 0.11 0.829 NK_CD56bright L2
ENSG00000162517 PEF1 -887548 sc-eQTL 3.69e-01 0.0992 0.11 0.829 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 38844 sc-eQTL 1.85e-01 -0.151 0.114 0.829 NK_CD56bright L2
ENSG00000287510 AL137857.1 25655 sc-eQTL 8.32e-01 -0.0238 0.112 0.829 NK_CD56bright L2
ENSG00000060688 SNRNP40 -539440 sc-eQTL 8.71e-01 0.0197 0.122 0.828 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 5.64e-01 -0.052 0.09 0.828 NK_CD56dim L2
ENSG00000134644 PUM1 -308643 sc-eQTL 6.52e-01 -0.0418 0.0923 0.828 NK_CD56dim L2
ENSG00000162511 LAPTM5 -426 sc-eQTL 3.77e-05 0.398 0.0946 0.828 NK_CD56dim L2
ENSG00000162517 PEF1 -887548 sc-eQTL 9.72e-01 0.00307 0.0876 0.828 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 38844 sc-eQTL 8.13e-01 -0.0292 0.123 0.828 NK_CD56dim L2
ENSG00000287510 AL137857.1 25655 sc-eQTL 5.73e-01 0.0574 0.102 0.828 NK_CD56dim L2
ENSG00000060688 SNRNP40 -539440 sc-eQTL 1.17e-01 -0.202 0.128 0.829 NK_HLA L2
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 8.00e-01 0.0292 0.115 0.829 NK_HLA L2
ENSG00000134644 PUM1 -308643 sc-eQTL 1.26e-01 0.171 0.111 0.829 NK_HLA L2
ENSG00000162511 LAPTM5 -426 sc-eQTL 2.96e-03 0.315 0.105 0.829 NK_HLA L2
ENSG00000162517 PEF1 -887548 sc-eQTL 7.33e-01 -0.0412 0.121 0.829 NK_HLA L2
ENSG00000186056 MATN1-AS1 38844 sc-eQTL 4.69e-01 0.0825 0.114 0.829 NK_HLA L2
ENSG00000287510 AL137857.1 25655 sc-eQTL 6.58e-01 -0.0489 0.11 0.829 NK_HLA L2
ENSG00000060688 SNRNP40 -539440 sc-eQTL 2.29e-01 -0.143 0.119 0.828 NK_cytokine L2
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 3.55e-01 -0.086 0.0928 0.828 NK_cytokine L2
ENSG00000134644 PUM1 -308643 sc-eQTL 2.03e-01 -0.128 0.1 0.828 NK_cytokine L2
ENSG00000162511 LAPTM5 -426 sc-eQTL 1.79e-04 0.408 0.107 0.828 NK_cytokine L2
ENSG00000162517 PEF1 -887548 sc-eQTL 5.28e-02 0.182 0.0935 0.828 NK_cytokine L2
ENSG00000186056 MATN1-AS1 38844 sc-eQTL 9.69e-01 -0.00455 0.117 0.828 NK_cytokine L2
ENSG00000287510 AL137857.1 25655 sc-eQTL 8.10e-01 -0.0263 0.109 0.828 NK_cytokine L2
ENSG00000060688 SNRNP40 -539440 sc-eQTL 2.68e-01 -0.149 0.134 0.822 PB L2
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 5.43e-01 -0.0952 0.156 0.822 PB L2
ENSG00000134644 PUM1 -308643 sc-eQTL 2.72e-01 0.149 0.135 0.822 PB L2
ENSG00000162510 MATN1 33763 sc-eQTL 8.95e-01 -0.0167 0.126 0.822 PB L2
ENSG00000162511 LAPTM5 -426 sc-eQTL 1.94e-01 0.117 0.0896 0.822 PB L2
ENSG00000162517 PEF1 -887548 sc-eQTL 5.42e-01 0.0849 0.139 0.822 PB L2
ENSG00000186056 MATN1-AS1 38844 sc-eQTL 6.17e-01 -0.0618 0.123 0.822 PB L2
ENSG00000287510 AL137857.1 25655 sc-eQTL 5.83e-01 0.0724 0.131 0.822 PB L2
ENSG00000060688 SNRNP40 -539440 sc-eQTL 8.71e-01 0.0152 0.093 0.826 Pro_T L2
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 9.87e-01 0.00186 0.118 0.826 Pro_T L2
ENSG00000134644 PUM1 -308643 sc-eQTL 8.42e-01 0.0219 0.11 0.826 Pro_T L2
ENSG00000162511 LAPTM5 -426 sc-eQTL 9.48e-01 0.00515 0.079 0.826 Pro_T L2
ENSG00000162517 PEF1 -887548 sc-eQTL 4.70e-01 -0.0838 0.116 0.826 Pro_T L2
ENSG00000186056 MATN1-AS1 38844 sc-eQTL 8.37e-01 0.0228 0.11 0.826 Pro_T L2
ENSG00000287510 AL137857.1 25655 sc-eQTL 3.67e-01 -0.0916 0.101 0.826 Pro_T L2
ENSG00000060688 SNRNP40 -539440 sc-eQTL 1.86e-02 -0.289 0.122 0.829 Treg L2
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 7.91e-01 0.0317 0.119 0.829 Treg L2
ENSG00000134644 PUM1 -308643 sc-eQTL 9.37e-01 0.00758 0.0956 0.829 Treg L2
ENSG00000162511 LAPTM5 -426 sc-eQTL 2.53e-01 0.125 0.109 0.829 Treg L2
ENSG00000162517 PEF1 -887548 sc-eQTL 9.72e-01 0.00421 0.118 0.829 Treg L2
ENSG00000186056 MATN1-AS1 38844 sc-eQTL 6.75e-01 0.0468 0.111 0.829 Treg L2
ENSG00000287510 AL137857.1 25655 sc-eQTL 8.32e-01 -0.0236 0.111 0.829 Treg L2
ENSG00000060688 SNRNP40 -539440 sc-eQTL 5.63e-01 -0.0755 0.13 0.837 cDC L2
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 2.31e-01 -0.169 0.141 0.837 cDC L2
ENSG00000134644 PUM1 -308643 sc-eQTL 6.25e-01 -0.0593 0.121 0.837 cDC L2
ENSG00000162511 LAPTM5 -426 sc-eQTL 2.97e-01 -0.0888 0.0848 0.837 cDC L2
ENSG00000162517 PEF1 -887548 sc-eQTL 4.89e-01 0.0853 0.123 0.837 cDC L2
ENSG00000168528 SERINC2 -652217 sc-eQTL 6.96e-01 0.0428 0.109 0.837 cDC L2
ENSG00000284543 LINC01226 -748878 sc-eQTL 2.30e-02 -0.243 0.106 0.837 cDC L2
ENSG00000287510 AL137857.1 25655 sc-eQTL 9.36e-01 0.00922 0.116 0.837 cDC L2
ENSG00000060688 SNRNP40 -539440 sc-eQTL 6.50e-01 0.0446 0.0983 0.829 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 7.23e-01 0.039 0.11 0.829 cMono_IL1B L2
ENSG00000134644 PUM1 -308643 sc-eQTL 4.21e-01 -0.0598 0.0741 0.829 cMono_IL1B L2
ENSG00000162511 LAPTM5 -426 sc-eQTL 4.46e-01 0.0497 0.0651 0.829 cMono_IL1B L2
ENSG00000162512 SDC3 -151410 sc-eQTL 2.24e-01 -0.149 0.122 0.829 cMono_IL1B L2
ENSG00000162517 PEF1 -887548 sc-eQTL 9.90e-01 0.00121 0.1 0.829 cMono_IL1B L2
ENSG00000168528 SERINC2 -652217 sc-eQTL 6.56e-01 -0.0554 0.124 0.829 cMono_IL1B L2
ENSG00000284543 LINC01226 -748878 sc-eQTL 3.43e-01 0.104 0.11 0.829 cMono_IL1B L2
ENSG00000287510 AL137857.1 25655 sc-eQTL 9.97e-01 0.000337 0.102 0.829 cMono_IL1B L2
ENSG00000060688 SNRNP40 -539440 sc-eQTL 6.87e-01 0.0418 0.103 0.829 cMono_S100A L2
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 5.11e-01 0.0805 0.122 0.829 cMono_S100A L2
ENSG00000134644 PUM1 -308643 sc-eQTL 3.10e-02 -0.19 0.0874 0.829 cMono_S100A L2
ENSG00000162511 LAPTM5 -426 sc-eQTL 7.04e-01 -0.0258 0.0679 0.829 cMono_S100A L2
ENSG00000162512 SDC3 -151410 sc-eQTL 5.36e-01 -0.0727 0.117 0.829 cMono_S100A L2
ENSG00000162517 PEF1 -887548 sc-eQTL 3.50e-01 -0.0991 0.106 0.829 cMono_S100A L2
ENSG00000168528 SERINC2 -652217 sc-eQTL 6.12e-01 -0.0631 0.124 0.829 cMono_S100A L2
ENSG00000284543 LINC01226 -748878 sc-eQTL 6.79e-01 -0.0419 0.101 0.829 cMono_S100A L2
ENSG00000287510 AL137857.1 25655 sc-eQTL 8.78e-01 -0.0156 0.101 0.829 cMono_S100A L2
ENSG00000060688 SNRNP40 -539440 sc-eQTL 7.52e-01 0.0465 0.147 0.83 gdT L2
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 9.90e-03 0.322 0.123 0.83 gdT L2
ENSG00000134644 PUM1 -308643 sc-eQTL 7.56e-01 -0.0405 0.13 0.83 gdT L2
ENSG00000162511 LAPTM5 -426 sc-eQTL 4.02e-01 0.119 0.141 0.83 gdT L2
ENSG00000162517 PEF1 -887548 sc-eQTL 1.95e-01 -0.168 0.129 0.83 gdT L2
ENSG00000186056 MATN1-AS1 38844 sc-eQTL 9.22e-01 0.0128 0.131 0.83 gdT L2
ENSG00000287510 AL137857.1 25655 sc-eQTL 5.20e-01 0.0815 0.126 0.83 gdT L2
ENSG00000060688 SNRNP40 -539440 sc-eQTL 8.23e-01 -0.0263 0.117 0.833 intMono L2
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 9.01e-01 -0.0156 0.126 0.833 intMono L2
ENSG00000134644 PUM1 -308643 sc-eQTL 7.58e-01 0.0329 0.107 0.833 intMono L2
ENSG00000162511 LAPTM5 -426 sc-eQTL 6.74e-01 0.0353 0.0838 0.833 intMono L2
ENSG00000162512 SDC3 -151410 sc-eQTL 6.95e-01 -0.045 0.115 0.833 intMono L2
ENSG00000162517 PEF1 -887548 sc-eQTL 4.30e-01 0.0952 0.12 0.833 intMono L2
ENSG00000168528 SERINC2 -652217 sc-eQTL 7.84e-01 0.033 0.12 0.833 intMono L2
ENSG00000284543 LINC01226 -748878 sc-eQTL 2.28e-01 -0.137 0.113 0.833 intMono L2
ENSG00000287510 AL137857.1 25655 sc-eQTL 8.25e-01 -0.0252 0.114 0.833 intMono L2
ENSG00000060688 SNRNP40 -539440 sc-eQTL 6.27e-01 -0.0532 0.109 0.828 ncMono L2
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 9.32e-01 0.00996 0.117 0.828 ncMono L2
ENSG00000134644 PUM1 -308643 sc-eQTL 2.75e-01 -0.104 0.095 0.828 ncMono L2
ENSG00000162511 LAPTM5 -426 sc-eQTL 1.66e-02 0.206 0.0853 0.828 ncMono L2
ENSG00000162512 SDC3 -151410 sc-eQTL 8.01e-01 -0.0244 0.097 0.828 ncMono L2
ENSG00000162517 PEF1 -887548 sc-eQTL 1.38e-01 -0.165 0.111 0.828 ncMono L2
ENSG00000168528 SERINC2 -652217 sc-eQTL 9.24e-01 0.0101 0.106 0.828 ncMono L2
ENSG00000284543 LINC01226 -748878 sc-eQTL 4.89e-01 -0.0732 0.106 0.828 ncMono L2
ENSG00000287510 AL137857.1 25655 sc-eQTL 8.39e-01 -0.0224 0.11 0.828 ncMono L2
ENSG00000060688 SNRNP40 -539440 sc-eQTL 3.81e-01 0.112 0.128 0.828 pDC L2
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 4.74e-01 -0.101 0.14 0.828 pDC L2
ENSG00000134644 PUM1 -308643 sc-eQTL 1.57e-01 -0.165 0.116 0.828 pDC L2
ENSG00000162511 LAPTM5 -426 sc-eQTL 7.24e-02 0.194 0.107 0.828 pDC L2
ENSG00000162517 PEF1 -887548 sc-eQTL 9.48e-01 -0.00918 0.14 0.828 pDC L2
ENSG00000168528 SERINC2 -652217 sc-eQTL 1.35e-01 0.196 0.13 0.828 pDC L2
ENSG00000284543 LINC01226 -748878 sc-eQTL 7.42e-01 -0.0336 0.102 0.828 pDC L2
ENSG00000287510 AL137857.1 25655 sc-eQTL 3.10e-01 -0.122 0.119 0.828 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -539440 sc-eQTL 8.94e-01 0.0164 0.123 0.829 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 6.71e-01 -0.0435 0.102 0.829 B_Memory LOneK1K
ENSG00000134644 PUM1 -308643 sc-eQTL 1.68e-02 -0.215 0.0894 0.829 B_Memory LOneK1K
ENSG00000162510 MATN1 33763 sc-eQTL 3.99e-01 -0.0871 0.103 0.829 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -426 sc-eQTL 8.97e-02 -0.11 0.0644 0.829 B_Memory LOneK1K
ENSG00000162517 PEF1 -887548 sc-eQTL 2.30e-01 -0.129 0.107 0.829 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 38844 sc-eQTL 5.05e-01 -0.0573 0.0857 0.829 B_Memory LOneK1K
ENSG00000287510 AL137857.1 25655 sc-eQTL 3.03e-01 -0.0963 0.0933 0.829 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -539440 sc-eQTL 9.47e-01 0.00738 0.111 0.829 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 7.99e-01 0.0224 0.088 0.829 B_Naive LOneK1K
ENSG00000134644 PUM1 -308643 sc-eQTL 4.57e-01 0.062 0.0831 0.829 B_Naive LOneK1K
ENSG00000162510 MATN1 33763 sc-eQTL 4.33e-01 0.0629 0.08 0.829 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -426 sc-eQTL 9.20e-01 -0.00566 0.0564 0.829 B_Naive LOneK1K
ENSG00000162517 PEF1 -887548 sc-eQTL 6.87e-01 0.0415 0.103 0.829 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 38844 sc-eQTL 3.83e-02 -0.15 0.0721 0.829 B_Naive LOneK1K
ENSG00000287510 AL137857.1 25655 sc-eQTL 6.56e-02 -0.159 0.0859 0.829 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -539440 sc-eQTL 4.40e-01 0.0727 0.0939 0.829 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 3.93e-01 0.0909 0.106 0.829 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -308643 sc-eQTL 9.92e-02 -0.112 0.0675 0.829 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -426 sc-eQTL 5.27e-01 0.0378 0.0596 0.829 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -151410 sc-eQTL 1.43e-01 -0.178 0.121 0.829 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -887548 sc-eQTL 5.84e-01 -0.0469 0.0856 0.829 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -652217 sc-eQTL 6.49e-01 -0.0571 0.125 0.829 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -748878 sc-eQTL 3.92e-01 0.0879 0.103 0.829 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 25655 sc-eQTL 9.47e-01 -0.0064 0.0962 0.829 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -539440 sc-eQTL 8.65e-01 0.0175 0.103 0.828 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 9.35e-01 0.00915 0.112 0.828 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -308643 sc-eQTL 7.03e-01 -0.035 0.0919 0.828 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -426 sc-eQTL 1.28e-01 0.112 0.0731 0.828 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -151410 sc-eQTL 7.07e-01 0.0404 0.107 0.828 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -887548 sc-eQTL 7.97e-01 -0.0252 0.0976 0.828 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -652217 sc-eQTL 5.83e-01 0.0612 0.111 0.828 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -748878 sc-eQTL 4.31e-01 -0.0832 0.106 0.828 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 25655 sc-eQTL 9.72e-01 -0.00367 0.106 0.828 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -539440 sc-eQTL 3.01e-01 -0.12 0.116 0.828 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -539634 sc-eQTL 4.60e-01 -0.0586 0.0792 0.828 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -308643 sc-eQTL 5.33e-01 -0.0543 0.0868 0.828 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -426 sc-eQTL 3.10e-06 0.442 0.0922 0.828 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -887548 sc-eQTL 1.35e-01 0.11 0.0734 0.828 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 38844 sc-eQTL 8.59e-01 0.0199 0.112 0.828 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 25655 sc-eQTL 6.06e-01 0.05 0.0966 0.828 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162511 LAPTM5 -426 eQTL 8.579999999999999e-23 0.116 0.0115 0.00248 0.00407 0.198
ENSG00000162512 SDC3 -151410 eQTL 1.11e-05 -0.131 0.0296 0.0 0.0 0.198
ENSG00000186056 MATN1-AS1 38844 eQTL 2.96e-04 -0.0552 0.0152 0.00202 0.0 0.198

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162511 LAPTM5 -426 0.000368 0.000201 1.47e-05 4.99e-05 1.9e-05 0.000102 0.000176 1.79e-05 0.00013 6.21e-05 0.000161 6.35e-05 0.000253 5.65e-05 3.03e-05 0.000117 7.41e-05 0.000161 3.16e-05 2.14e-05 7.04e-05 0.000183 0.000182 4.02e-05 0.000226 4.42e-05 7.7e-05 4.68e-05 0.000138 7.05e-05 7.85e-05 3.49e-06 6.07e-06 2.25e-05 2.62e-05 1.16e-05 5.31e-06 4.02e-06 1.36e-05 5.94e-06 2.62e-06 0.000279 3.49e-05 3.63e-07 1.4e-05 1.36e-05 1.65e-05 3.78e-06 3.26e-06
ENSG00000162512 SDC3 -151410 1.21e-05 4.99e-06 8.35e-07 3.21e-06 6.15e-07 2.32e-06 5.56e-06 8.45e-07 2.88e-06 1.42e-06 4.2e-06 1.95e-06 7.58e-06 1.4e-06 1.45e-06 3.89e-06 2e-06 3.49e-06 1.45e-06 1.2e-06 1.45e-06 4.49e-06 4.6e-06 1.39e-06 8.44e-06 1.25e-06 2.57e-06 1.07e-06 4.3e-06 4.23e-06 1.93e-06 2.62e-07 6.2e-07 1.24e-06 2.35e-06 9.66e-07 6.79e-07 3.09e-07 1.13e-06 5.21e-07 2.74e-07 8.34e-06 1.06e-06 1.14e-07 5.95e-07 3.21e-07 8.69e-07 4.41e-07 2.87e-07