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Genes within 1Mb (chr1:30757163:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -539625 sc-eQTL 7.58e-01 -0.0279 0.0903 0.293 B L1
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 5.41e-01 -0.0443 0.0723 0.293 B L1
ENSG00000134644 PUM1 -308828 sc-eQTL 2.39e-01 0.0715 0.0605 0.293 B L1
ENSG00000162510 MATN1 33578 sc-eQTL 5.20e-01 -0.0411 0.0638 0.293 B L1
ENSG00000162511 LAPTM5 -611 sc-eQTL 2.18e-02 0.114 0.0494 0.293 B L1
ENSG00000162517 PEF1 -887733 sc-eQTL 9.15e-01 0.00805 0.0755 0.293 B L1
ENSG00000186056 MATN1-AS1 38659 sc-eQTL 1.08e-01 0.0939 0.0582 0.293 B L1
ENSG00000287510 AL137857.1 25470 sc-eQTL 8.87e-01 -0.00984 0.0693 0.293 B L1
ENSG00000060688 SNRNP40 -539625 sc-eQTL 9.90e-01 0.00093 0.0779 0.293 CD4T L1
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 7.51e-01 0.0193 0.0609 0.293 CD4T L1
ENSG00000134644 PUM1 -308828 sc-eQTL 4.37e-01 0.0422 0.0541 0.293 CD4T L1
ENSG00000162511 LAPTM5 -611 sc-eQTL 9.67e-02 -0.0996 0.0597 0.293 CD4T L1
ENSG00000162517 PEF1 -887733 sc-eQTL 1.97e-01 -0.081 0.0626 0.293 CD4T L1
ENSG00000186056 MATN1-AS1 38659 sc-eQTL 8.04e-01 0.0133 0.0537 0.293 CD4T L1
ENSG00000287510 AL137857.1 25470 sc-eQTL 6.48e-01 0.0294 0.0643 0.293 CD4T L1
ENSG00000060688 SNRNP40 -539625 sc-eQTL 5.03e-01 -0.0688 0.103 0.293 CD8T L1
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 4.58e-01 -0.0507 0.0682 0.293 CD8T L1
ENSG00000134644 PUM1 -308828 sc-eQTL 6.81e-01 0.0248 0.0601 0.293 CD8T L1
ENSG00000162511 LAPTM5 -611 sc-eQTL 6.28e-01 -0.0283 0.0584 0.293 CD8T L1
ENSG00000162517 PEF1 -887733 sc-eQTL 7.64e-01 0.0216 0.0719 0.293 CD8T L1
ENSG00000186056 MATN1-AS1 38659 sc-eQTL 9.66e-01 -0.00294 0.0685 0.293 CD8T L1
ENSG00000287510 AL137857.1 25470 sc-eQTL 5.54e-01 -0.051 0.0859 0.293 CD8T L1
ENSG00000060688 SNRNP40 -539625 sc-eQTL 4.49e-01 0.0713 0.094 0.295 DC L1
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 1.14e-01 -0.176 0.111 0.295 DC L1
ENSG00000134644 PUM1 -308828 sc-eQTL 1.92e-01 -0.114 0.087 0.295 DC L1
ENSG00000162511 LAPTM5 -611 sc-eQTL 6.17e-01 -0.0312 0.0623 0.295 DC L1
ENSG00000162517 PEF1 -887733 sc-eQTL 6.49e-01 0.0461 0.101 0.295 DC L1
ENSG00000168528 SERINC2 -652402 sc-eQTL 8.85e-01 0.0149 0.103 0.295 DC L1
ENSG00000284543 LINC01226 -749063 sc-eQTL 4.28e-01 0.054 0.068 0.295 DC L1
ENSG00000287510 AL137857.1 25470 sc-eQTL 1.99e-01 0.127 0.0982 0.295 DC L1
ENSG00000060688 SNRNP40 -539625 sc-eQTL 3.12e-02 -0.152 0.07 0.293 Mono L1
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 3.61e-01 -0.0802 0.0876 0.293 Mono L1
ENSG00000134644 PUM1 -308828 sc-eQTL 3.03e-01 0.0579 0.0561 0.293 Mono L1
ENSG00000162511 LAPTM5 -611 sc-eQTL 5.27e-02 0.0999 0.0513 0.293 Mono L1
ENSG00000162512 SDC3 -151595 sc-eQTL 3.35e-01 0.0959 0.0993 0.293 Mono L1
ENSG00000162517 PEF1 -887733 sc-eQTL 5.78e-01 -0.0389 0.0697 0.293 Mono L1
ENSG00000168528 SERINC2 -652402 sc-eQTL 3.49e-01 -0.1 0.107 0.293 Mono L1
ENSG00000284543 LINC01226 -749063 sc-eQTL 3.09e-01 -0.0956 0.0938 0.293 Mono L1
ENSG00000287510 AL137857.1 25470 sc-eQTL 6.55e-01 0.0367 0.0821 0.293 Mono L1
ENSG00000060688 SNRNP40 -539625 sc-eQTL 2.37e-01 -0.115 0.0966 0.292 NK L1
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 7.10e-01 -0.0247 0.0664 0.292 NK L1
ENSG00000134644 PUM1 -308828 sc-eQTL 7.33e-01 0.0238 0.0696 0.292 NK L1
ENSG00000162511 LAPTM5 -611 sc-eQTL 1.79e-01 0.108 0.0798 0.292 NK L1
ENSG00000162517 PEF1 -887733 sc-eQTL 6.88e-01 0.0235 0.0585 0.292 NK L1
ENSG00000186056 MATN1-AS1 38659 sc-eQTL 3.69e-01 -0.081 0.0899 0.292 NK L1
ENSG00000287510 AL137857.1 25470 sc-eQTL 2.74e-01 0.091 0.0829 0.292 NK L1
ENSG00000060688 SNRNP40 -539625 sc-eQTL 1.79e-01 0.1 0.0745 0.293 Other_T L1
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 3.49e-01 0.075 0.0798 0.293 Other_T L1
ENSG00000134644 PUM1 -308828 sc-eQTL 2.15e-01 0.0891 0.0717 0.293 Other_T L1
ENSG00000162511 LAPTM5 -611 sc-eQTL 6.87e-01 -0.0238 0.0589 0.293 Other_T L1
ENSG00000162517 PEF1 -887733 sc-eQTL 7.43e-01 0.0259 0.0787 0.293 Other_T L1
ENSG00000186056 MATN1-AS1 38659 sc-eQTL 1.80e-02 -0.227 0.0953 0.293 Other_T L1
ENSG00000287510 AL137857.1 25470 sc-eQTL 1.61e-01 -0.141 0.1 0.293 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -539625 sc-eQTL 5.03e-01 -0.0792 0.118 0.291 B_Activated L2
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 5.53e-01 -0.0706 0.119 0.291 B_Activated L2
ENSG00000134644 PUM1 -308828 sc-eQTL 4.63e-01 0.0812 0.11 0.291 B_Activated L2
ENSG00000162510 MATN1 33578 sc-eQTL 8.15e-01 -0.0226 0.0966 0.291 B_Activated L2
ENSG00000162511 LAPTM5 -611 sc-eQTL 6.91e-01 0.0269 0.0674 0.291 B_Activated L2
ENSG00000162517 PEF1 -887733 sc-eQTL 6.77e-01 -0.0479 0.115 0.291 B_Activated L2
ENSG00000186056 MATN1-AS1 38659 sc-eQTL 1.37e-01 -0.162 0.108 0.291 B_Activated L2
ENSG00000287510 AL137857.1 25470 sc-eQTL 4.88e-01 -0.0668 0.0961 0.291 B_Activated L2
ENSG00000060688 SNRNP40 -539625 sc-eQTL 8.41e-02 -0.19 0.109 0.292 B_Intermediate L2
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 1.59e-01 -0.129 0.0913 0.292 B_Intermediate L2
ENSG00000134644 PUM1 -308828 sc-eQTL 8.59e-01 -0.0154 0.0866 0.292 B_Intermediate L2
ENSG00000162510 MATN1 33578 sc-eQTL 3.00e-01 -0.0933 0.0899 0.292 B_Intermediate L2
ENSG00000162511 LAPTM5 -611 sc-eQTL 7.87e-01 -0.015 0.0553 0.292 B_Intermediate L2
ENSG00000162517 PEF1 -887733 sc-eQTL 4.55e-01 0.0768 0.103 0.292 B_Intermediate L2
ENSG00000186056 MATN1-AS1 38659 sc-eQTL 3.04e-01 0.0799 0.0774 0.292 B_Intermediate L2
ENSG00000287510 AL137857.1 25470 sc-eQTL 7.59e-01 0.0266 0.0868 0.292 B_Intermediate L2
ENSG00000060688 SNRNP40 -539625 sc-eQTL 7.97e-01 0.0278 0.108 0.293 B_Memory L2
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 5.01e-01 0.0668 0.0992 0.293 B_Memory L2
ENSG00000134644 PUM1 -308828 sc-eQTL 7.22e-01 -0.0308 0.0864 0.293 B_Memory L2
ENSG00000162510 MATN1 33578 sc-eQTL 7.46e-01 -0.0268 0.0826 0.293 B_Memory L2
ENSG00000162511 LAPTM5 -611 sc-eQTL 2.26e-02 0.166 0.0724 0.293 B_Memory L2
ENSG00000162517 PEF1 -887733 sc-eQTL 8.82e-01 -0.0145 0.0978 0.293 B_Memory L2
ENSG00000186056 MATN1-AS1 38659 sc-eQTL 1.62e-01 0.117 0.0835 0.293 B_Memory L2
ENSG00000287510 AL137857.1 25470 sc-eQTL 4.48e-01 0.0745 0.0981 0.293 B_Memory L2
ENSG00000060688 SNRNP40 -539625 sc-eQTL 7.52e-01 -0.0309 0.0976 0.293 B_Naive1 L2
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 9.37e-01 0.00663 0.0843 0.293 B_Naive1 L2
ENSG00000134644 PUM1 -308828 sc-eQTL 7.17e-02 0.134 0.0738 0.293 B_Naive1 L2
ENSG00000162510 MATN1 33578 sc-eQTL 5.95e-01 -0.0401 0.0754 0.293 B_Naive1 L2
ENSG00000162511 LAPTM5 -611 sc-eQTL 8.53e-02 0.0865 0.05 0.293 B_Naive1 L2
ENSG00000162517 PEF1 -887733 sc-eQTL 2.31e-01 -0.106 0.0885 0.293 B_Naive1 L2
ENSG00000186056 MATN1-AS1 38659 sc-eQTL 3.70e-01 0.0594 0.0661 0.293 B_Naive1 L2
ENSG00000287510 AL137857.1 25470 sc-eQTL 8.63e-01 0.0141 0.0818 0.293 B_Naive1 L2
ENSG00000060688 SNRNP40 -539625 sc-eQTL 7.02e-01 0.0403 0.105 0.294 B_Naive2 L2
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 7.51e-01 0.0276 0.0868 0.294 B_Naive2 L2
ENSG00000134644 PUM1 -308828 sc-eQTL 9.50e-01 0.00537 0.085 0.294 B_Naive2 L2
ENSG00000162510 MATN1 33578 sc-eQTL 3.43e-01 0.0774 0.0814 0.294 B_Naive2 L2
ENSG00000162511 LAPTM5 -611 sc-eQTL 2.62e-01 0.0621 0.0553 0.294 B_Naive2 L2
ENSG00000162517 PEF1 -887733 sc-eQTL 1.03e-01 0.164 0.1 0.294 B_Naive2 L2
ENSG00000186056 MATN1-AS1 38659 sc-eQTL 9.20e-01 0.00812 0.0807 0.294 B_Naive2 L2
ENSG00000287510 AL137857.1 25470 sc-eQTL 5.72e-01 0.0493 0.0871 0.294 B_Naive2 L2
ENSG00000060688 SNRNP40 -539625 sc-eQTL 5.77e-02 -0.202 0.106 0.289 CD4_CTL L2
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 1.62e-01 -0.147 0.105 0.289 CD4_CTL L2
ENSG00000134644 PUM1 -308828 sc-eQTL 5.60e-01 -0.0601 0.103 0.289 CD4_CTL L2
ENSG00000162511 LAPTM5 -611 sc-eQTL 9.67e-01 -0.0038 0.0919 0.289 CD4_CTL L2
ENSG00000162517 PEF1 -887733 sc-eQTL 8.78e-01 0.0145 0.0942 0.289 CD4_CTL L2
ENSG00000186056 MATN1-AS1 38659 sc-eQTL 7.86e-01 0.0274 0.101 0.289 CD4_CTL L2
ENSG00000287510 AL137857.1 25470 sc-eQTL 7.60e-01 -0.0272 0.0887 0.289 CD4_CTL L2
ENSG00000060688 SNRNP40 -539625 sc-eQTL 3.45e-01 0.0767 0.081 0.293 CD4_Naive L2
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 8.84e-01 0.0105 0.072 0.293 CD4_Naive L2
ENSG00000134644 PUM1 -308828 sc-eQTL 4.67e-01 0.0418 0.0574 0.293 CD4_Naive L2
ENSG00000162511 LAPTM5 -611 sc-eQTL 5.48e-02 -0.118 0.0611 0.293 CD4_Naive L2
ENSG00000162517 PEF1 -887733 sc-eQTL 1.62e-01 -0.0944 0.0672 0.293 CD4_Naive L2
ENSG00000186056 MATN1-AS1 38659 sc-eQTL 3.74e-01 -0.0556 0.0624 0.293 CD4_Naive L2
ENSG00000287510 AL137857.1 25470 sc-eQTL 4.78e-01 0.051 0.0717 0.293 CD4_Naive L2
ENSG00000060688 SNRNP40 -539625 sc-eQTL 6.79e-01 -0.0424 0.102 0.293 CD4_TCM L2
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 6.75e-01 0.0346 0.0824 0.293 CD4_TCM L2
ENSG00000134644 PUM1 -308828 sc-eQTL 6.81e-01 0.03 0.0729 0.293 CD4_TCM L2
ENSG00000162511 LAPTM5 -611 sc-eQTL 3.74e-01 -0.0539 0.0604 0.293 CD4_TCM L2
ENSG00000162517 PEF1 -887733 sc-eQTL 4.59e-02 -0.161 0.0804 0.293 CD4_TCM L2
ENSG00000186056 MATN1-AS1 38659 sc-eQTL 5.10e-02 0.149 0.0761 0.293 CD4_TCM L2
ENSG00000287510 AL137857.1 25470 sc-eQTL 4.49e-01 0.0648 0.0854 0.293 CD4_TCM L2
ENSG00000060688 SNRNP40 -539625 sc-eQTL 7.61e-01 0.0312 0.102 0.293 CD4_TEM L2
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 7.38e-01 0.0327 0.0976 0.293 CD4_TEM L2
ENSG00000134644 PUM1 -308828 sc-eQTL 1.05e-01 -0.132 0.0808 0.293 CD4_TEM L2
ENSG00000162511 LAPTM5 -611 sc-eQTL 1.13e-01 0.13 0.0818 0.293 CD4_TEM L2
ENSG00000162517 PEF1 -887733 sc-eQTL 6.35e-01 0.0438 0.0921 0.293 CD4_TEM L2
ENSG00000186056 MATN1-AS1 38659 sc-eQTL 3.46e-01 0.0907 0.096 0.293 CD4_TEM L2
ENSG00000287510 AL137857.1 25470 sc-eQTL 9.18e-01 0.00978 0.0948 0.293 CD4_TEM L2
ENSG00000060688 SNRNP40 -539625 sc-eQTL 8.59e-01 -0.0198 0.112 0.293 CD8_CTL L2
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 1.26e-01 -0.131 0.0851 0.293 CD8_CTL L2
ENSG00000134644 PUM1 -308828 sc-eQTL 7.98e-01 0.0213 0.0831 0.293 CD8_CTL L2
ENSG00000162511 LAPTM5 -611 sc-eQTL 7.23e-01 -0.0327 0.092 0.293 CD8_CTL L2
ENSG00000162517 PEF1 -887733 sc-eQTL 9.82e-01 -0.00184 0.0802 0.293 CD8_CTL L2
ENSG00000186056 MATN1-AS1 38659 sc-eQTL 4.60e-01 0.0716 0.0966 0.293 CD8_CTL L2
ENSG00000287510 AL137857.1 25470 sc-eQTL 3.83e-01 -0.0795 0.0908 0.293 CD8_CTL L2
ENSG00000060688 SNRNP40 -539625 sc-eQTL 8.36e-01 -0.0212 0.102 0.293 CD8_Naive L2
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 6.91e-01 -0.035 0.0878 0.293 CD8_Naive L2
ENSG00000134644 PUM1 -308828 sc-eQTL 9.09e-01 0.00811 0.0707 0.293 CD8_Naive L2
ENSG00000162511 LAPTM5 -611 sc-eQTL 1.72e-01 -0.0924 0.0675 0.293 CD8_Naive L2
ENSG00000162517 PEF1 -887733 sc-eQTL 8.66e-01 0.016 0.0942 0.293 CD8_Naive L2
ENSG00000186056 MATN1-AS1 38659 sc-eQTL 2.69e-01 -0.0934 0.0843 0.293 CD8_Naive L2
ENSG00000287510 AL137857.1 25470 sc-eQTL 3.05e-01 -0.0943 0.0918 0.293 CD8_Naive L2
ENSG00000060688 SNRNP40 -539625 sc-eQTL 1.06e-01 -0.19 0.117 0.292 CD8_TCM L2
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 4.78e-01 -0.0766 0.108 0.292 CD8_TCM L2
ENSG00000134644 PUM1 -308828 sc-eQTL 2.95e-02 0.22 0.1 0.292 CD8_TCM L2
ENSG00000162511 LAPTM5 -611 sc-eQTL 7.35e-01 -0.0359 0.106 0.292 CD8_TCM L2
ENSG00000162517 PEF1 -887733 sc-eQTL 3.66e-01 0.098 0.108 0.292 CD8_TCM L2
ENSG00000186056 MATN1-AS1 38659 sc-eQTL 7.41e-01 -0.0325 0.0982 0.292 CD8_TCM L2
ENSG00000287510 AL137857.1 25470 sc-eQTL 5.38e-02 0.191 0.0983 0.292 CD8_TCM L2
ENSG00000060688 SNRNP40 -539625 sc-eQTL 9.15e-01 0.0115 0.108 0.292 CD8_TEM L2
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 1.50e-01 -0.149 0.103 0.292 CD8_TEM L2
ENSG00000134644 PUM1 -308828 sc-eQTL 2.16e-01 0.131 0.105 0.292 CD8_TEM L2
ENSG00000162511 LAPTM5 -611 sc-eQTL 6.55e-02 -0.183 0.0985 0.292 CD8_TEM L2
ENSG00000162517 PEF1 -887733 sc-eQTL 8.83e-01 0.0137 0.0936 0.292 CD8_TEM L2
ENSG00000186056 MATN1-AS1 38659 sc-eQTL 5.48e-01 -0.0621 0.103 0.292 CD8_TEM L2
ENSG00000287510 AL137857.1 25470 sc-eQTL 6.48e-01 0.0427 0.0933 0.292 CD8_TEM L2
ENSG00000060688 SNRNP40 -539625 sc-eQTL 7.21e-01 0.0401 0.112 0.29 MAIT L2
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 8.08e-01 0.0241 0.0992 0.29 MAIT L2
ENSG00000134644 PUM1 -308828 sc-eQTL 1.66e-01 0.132 0.0947 0.29 MAIT L2
ENSG00000162511 LAPTM5 -611 sc-eQTL 3.12e-01 -0.0907 0.0895 0.29 MAIT L2
ENSG00000162517 PEF1 -887733 sc-eQTL 2.31e-01 -0.118 0.0982 0.29 MAIT L2
ENSG00000186056 MATN1-AS1 38659 sc-eQTL 1.81e-01 -0.133 0.0995 0.29 MAIT L2
ENSG00000287510 AL137857.1 25470 sc-eQTL 7.35e-01 0.0349 0.103 0.29 MAIT L2
ENSG00000060688 SNRNP40 -539625 sc-eQTL 4.43e-01 -0.0838 0.109 0.296 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 7.45e-01 0.03 0.0923 0.296 NK_CD56bright L2
ENSG00000134644 PUM1 -308828 sc-eQTL 4.06e-01 -0.0805 0.0968 0.296 NK_CD56bright L2
ENSG00000162511 LAPTM5 -611 sc-eQTL 5.64e-01 0.0553 0.0955 0.296 NK_CD56bright L2
ENSG00000162517 PEF1 -887733 sc-eQTL 7.68e-01 -0.0274 0.0929 0.296 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 38659 sc-eQTL 6.43e-01 -0.0446 0.096 0.296 NK_CD56bright L2
ENSG00000287510 AL137857.1 25470 sc-eQTL 6.96e-01 0.0371 0.0946 0.296 NK_CD56bright L2
ENSG00000060688 SNRNP40 -539625 sc-eQTL 4.53e-01 -0.0772 0.103 0.291 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 3.96e-01 -0.0646 0.076 0.291 NK_CD56dim L2
ENSG00000134644 PUM1 -308828 sc-eQTL 8.16e-01 -0.0182 0.0781 0.291 NK_CD56dim L2
ENSG00000162511 LAPTM5 -611 sc-eQTL 2.36e-01 0.0987 0.083 0.291 NK_CD56dim L2
ENSG00000162517 PEF1 -887733 sc-eQTL 6.29e-01 -0.0358 0.0741 0.291 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 38659 sc-eQTL 7.36e-01 -0.0352 0.104 0.291 NK_CD56dim L2
ENSG00000287510 AL137857.1 25470 sc-eQTL 2.96e-01 0.09 0.0858 0.291 NK_CD56dim L2
ENSG00000060688 SNRNP40 -539625 sc-eQTL 1.69e-01 -0.151 0.109 0.297 NK_HLA L2
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 7.14e-01 0.0361 0.0982 0.297 NK_HLA L2
ENSG00000134644 PUM1 -308828 sc-eQTL 5.12e-02 0.186 0.0948 0.297 NK_HLA L2
ENSG00000162511 LAPTM5 -611 sc-eQTL 6.32e-01 0.0438 0.0913 0.297 NK_HLA L2
ENSG00000162517 PEF1 -887733 sc-eQTL 7.31e-01 -0.0354 0.103 0.297 NK_HLA L2
ENSG00000186056 MATN1-AS1 38659 sc-eQTL 5.56e-01 0.0573 0.0971 0.297 NK_HLA L2
ENSG00000287510 AL137857.1 25470 sc-eQTL 2.88e-01 -0.0998 0.0937 0.297 NK_HLA L2
ENSG00000060688 SNRNP40 -539625 sc-eQTL 3.74e-01 -0.0901 0.101 0.291 NK_cytokine L2
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 5.28e-01 0.0499 0.079 0.291 NK_cytokine L2
ENSG00000134644 PUM1 -308828 sc-eQTL 8.34e-01 0.018 0.0855 0.291 NK_cytokine L2
ENSG00000162511 LAPTM5 -611 sc-eQTL 1.47e-01 0.136 0.0936 0.291 NK_cytokine L2
ENSG00000162517 PEF1 -887733 sc-eQTL 9.87e-01 0.00134 0.0802 0.291 NK_cytokine L2
ENSG00000186056 MATN1-AS1 38659 sc-eQTL 1.97e-01 -0.128 0.0993 0.291 NK_cytokine L2
ENSG00000287510 AL137857.1 25470 sc-eQTL 5.76e-01 -0.052 0.0927 0.291 NK_cytokine L2
ENSG00000060688 SNRNP40 -539625 sc-eQTL 7.64e-01 -0.0351 0.117 0.293 PB L2
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 9.86e-01 0.00246 0.136 0.293 PB L2
ENSG00000134644 PUM1 -308828 sc-eQTL 9.24e-01 0.0113 0.118 0.293 PB L2
ENSG00000162510 MATN1 33578 sc-eQTL 7.04e-01 -0.0417 0.11 0.293 PB L2
ENSG00000162511 LAPTM5 -611 sc-eQTL 9.88e-01 -0.00123 0.0784 0.293 PB L2
ENSG00000162517 PEF1 -887733 sc-eQTL 8.78e-01 -0.0186 0.121 0.293 PB L2
ENSG00000186056 MATN1-AS1 38659 sc-eQTL 6.27e-01 -0.0522 0.107 0.293 PB L2
ENSG00000287510 AL137857.1 25470 sc-eQTL 5.38e-01 0.0705 0.114 0.293 PB L2
ENSG00000060688 SNRNP40 -539625 sc-eQTL 7.52e-01 -0.0257 0.0814 0.296 Pro_T L2
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 1.50e-03 0.324 0.101 0.296 Pro_T L2
ENSG00000134644 PUM1 -308828 sc-eQTL 6.42e-01 -0.0449 0.0963 0.296 Pro_T L2
ENSG00000162511 LAPTM5 -611 sc-eQTL 3.71e-01 -0.0619 0.069 0.296 Pro_T L2
ENSG00000162517 PEF1 -887733 sc-eQTL 7.78e-01 0.0286 0.101 0.296 Pro_T L2
ENSG00000186056 MATN1-AS1 38659 sc-eQTL 1.22e-01 -0.149 0.0961 0.296 Pro_T L2
ENSG00000287510 AL137857.1 25470 sc-eQTL 8.97e-01 -0.0115 0.0889 0.296 Pro_T L2
ENSG00000060688 SNRNP40 -539625 sc-eQTL 4.15e-02 -0.217 0.106 0.293 Treg L2
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 7.99e-01 -0.0264 0.104 0.293 Treg L2
ENSG00000134644 PUM1 -308828 sc-eQTL 2.47e-01 0.0959 0.0826 0.293 Treg L2
ENSG00000162511 LAPTM5 -611 sc-eQTL 6.90e-01 -0.0378 0.0949 0.293 Treg L2
ENSG00000162517 PEF1 -887733 sc-eQTL 9.32e-01 -0.00872 0.103 0.293 Treg L2
ENSG00000186056 MATN1-AS1 38659 sc-eQTL 3.75e-01 0.0859 0.0965 0.293 Treg L2
ENSG00000287510 AL137857.1 25470 sc-eQTL 6.51e-01 -0.0438 0.0965 0.293 Treg L2
ENSG00000060688 SNRNP40 -539625 sc-eQTL 3.18e-01 0.111 0.111 0.293 cDC L2
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 6.48e-01 -0.0553 0.121 0.293 cDC L2
ENSG00000134644 PUM1 -308828 sc-eQTL 6.88e-01 -0.0418 0.104 0.293 cDC L2
ENSG00000162511 LAPTM5 -611 sc-eQTL 9.63e-01 -0.00337 0.0728 0.293 cDC L2
ENSG00000162517 PEF1 -887733 sc-eQTL 7.83e-01 -0.029 0.105 0.293 cDC L2
ENSG00000168528 SERINC2 -652402 sc-eQTL 3.74e-01 -0.0831 0.0933 0.293 cDC L2
ENSG00000284543 LINC01226 -749063 sc-eQTL 8.75e-01 -0.0145 0.0918 0.293 cDC L2
ENSG00000287510 AL137857.1 25470 sc-eQTL 3.52e-02 0.207 0.0977 0.293 cDC L2
ENSG00000060688 SNRNP40 -539625 sc-eQTL 3.91e-01 -0.0734 0.0854 0.293 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 4.25e-01 -0.0762 0.0953 0.293 cMono_IL1B L2
ENSG00000134644 PUM1 -308828 sc-eQTL 3.04e-01 0.0664 0.0645 0.293 cMono_IL1B L2
ENSG00000162511 LAPTM5 -611 sc-eQTL 1.94e-01 0.0735 0.0565 0.293 cMono_IL1B L2
ENSG00000162512 SDC3 -151595 sc-eQTL 3.63e-01 0.0973 0.107 0.293 cMono_IL1B L2
ENSG00000162517 PEF1 -887733 sc-eQTL 4.61e-01 0.0644 0.0872 0.293 cMono_IL1B L2
ENSG00000168528 SERINC2 -652402 sc-eQTL 2.23e-01 -0.132 0.108 0.293 cMono_IL1B L2
ENSG00000284543 LINC01226 -749063 sc-eQTL 6.60e-01 -0.042 0.0956 0.293 cMono_IL1B L2
ENSG00000287510 AL137857.1 25470 sc-eQTL 5.75e-01 -0.05 0.0891 0.293 cMono_IL1B L2
ENSG00000060688 SNRNP40 -539625 sc-eQTL 5.37e-02 -0.172 0.0885 0.293 cMono_S100A L2
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 7.04e-01 0.0401 0.105 0.293 cMono_S100A L2
ENSG00000134644 PUM1 -308828 sc-eQTL 8.83e-01 -0.0113 0.0762 0.293 cMono_S100A L2
ENSG00000162511 LAPTM5 -611 sc-eQTL 7.46e-02 0.104 0.0582 0.293 cMono_S100A L2
ENSG00000162512 SDC3 -151595 sc-eQTL 5.58e-01 0.0594 0.101 0.293 cMono_S100A L2
ENSG00000162517 PEF1 -887733 sc-eQTL 2.12e-01 -0.114 0.0911 0.293 cMono_S100A L2
ENSG00000168528 SERINC2 -652402 sc-eQTL 3.75e-01 -0.0951 0.107 0.293 cMono_S100A L2
ENSG00000284543 LINC01226 -749063 sc-eQTL 2.11e-01 -0.109 0.0867 0.293 cMono_S100A L2
ENSG00000287510 AL137857.1 25470 sc-eQTL 8.92e-01 -0.0119 0.0874 0.293 cMono_S100A L2
ENSG00000060688 SNRNP40 -539625 sc-eQTL 6.91e-01 -0.0557 0.14 0.285 gdT L2
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 5.76e-01 0.0672 0.12 0.285 gdT L2
ENSG00000134644 PUM1 -308828 sc-eQTL 8.87e-01 0.0177 0.124 0.285 gdT L2
ENSG00000162511 LAPTM5 -611 sc-eQTL 7.44e-01 -0.0441 0.135 0.285 gdT L2
ENSG00000162517 PEF1 -887733 sc-eQTL 5.46e-01 0.0745 0.123 0.285 gdT L2
ENSG00000186056 MATN1-AS1 38659 sc-eQTL 9.12e-01 -0.0137 0.124 0.285 gdT L2
ENSG00000287510 AL137857.1 25470 sc-eQTL 2.05e-02 -0.277 0.118 0.285 gdT L2
ENSG00000060688 SNRNP40 -539625 sc-eQTL 8.53e-02 -0.169 0.0978 0.298 intMono L2
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 5.94e-01 -0.0565 0.106 0.298 intMono L2
ENSG00000134644 PUM1 -308828 sc-eQTL 3.12e-01 0.0908 0.0897 0.298 intMono L2
ENSG00000162511 LAPTM5 -611 sc-eQTL 1.03e-01 0.115 0.0701 0.298 intMono L2
ENSG00000162512 SDC3 -151595 sc-eQTL 4.86e-01 0.0673 0.0965 0.298 intMono L2
ENSG00000162517 PEF1 -887733 sc-eQTL 2.10e-01 0.127 0.101 0.298 intMono L2
ENSG00000168528 SERINC2 -652402 sc-eQTL 4.00e-01 -0.0851 0.101 0.298 intMono L2
ENSG00000284543 LINC01226 -749063 sc-eQTL 2.08e-01 -0.12 0.0954 0.298 intMono L2
ENSG00000287510 AL137857.1 25470 sc-eQTL 2.88e-01 0.102 0.0955 0.298 intMono L2
ENSG00000060688 SNRNP40 -539625 sc-eQTL 1.82e-01 -0.127 0.0947 0.296 ncMono L2
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 3.11e-01 -0.103 0.101 0.296 ncMono L2
ENSG00000134644 PUM1 -308828 sc-eQTL 3.41e-01 0.0789 0.0827 0.296 ncMono L2
ENSG00000162511 LAPTM5 -611 sc-eQTL 1.76e-01 0.102 0.0749 0.296 ncMono L2
ENSG00000162512 SDC3 -151595 sc-eQTL 8.42e-01 0.0169 0.0844 0.296 ncMono L2
ENSG00000162517 PEF1 -887733 sc-eQTL 4.10e-01 -0.0798 0.0966 0.296 ncMono L2
ENSG00000168528 SERINC2 -652402 sc-eQTL 5.69e-01 -0.0524 0.092 0.296 ncMono L2
ENSG00000284543 LINC01226 -749063 sc-eQTL 9.27e-01 0.00841 0.092 0.296 ncMono L2
ENSG00000287510 AL137857.1 25470 sc-eQTL 2.48e-02 0.213 0.0942 0.296 ncMono L2
ENSG00000060688 SNRNP40 -539625 sc-eQTL 7.31e-01 -0.0375 0.109 0.288 pDC L2
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 3.05e-02 -0.258 0.118 0.288 pDC L2
ENSG00000134644 PUM1 -308828 sc-eQTL 1.28e-01 -0.151 0.0985 0.288 pDC L2
ENSG00000162511 LAPTM5 -611 sc-eQTL 6.50e-01 -0.0419 0.0922 0.288 pDC L2
ENSG00000162517 PEF1 -887733 sc-eQTL 8.11e-01 0.0287 0.12 0.288 pDC L2
ENSG00000168528 SERINC2 -652402 sc-eQTL 9.33e-01 -0.00946 0.112 0.288 pDC L2
ENSG00000284543 LINC01226 -749063 sc-eQTL 9.38e-01 -0.00677 0.0869 0.288 pDC L2
ENSG00000287510 AL137857.1 25470 sc-eQTL 3.34e-01 -0.0987 0.102 0.288 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -539625 sc-eQTL 1.18e-01 -0.164 0.104 0.293 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 7.19e-01 -0.0315 0.0873 0.293 B_Memory LOneK1K
ENSG00000134644 PUM1 -308828 sc-eQTL 3.95e-01 -0.0659 0.0773 0.293 B_Memory LOneK1K
ENSG00000162510 MATN1 33578 sc-eQTL 2.61e-01 -0.0992 0.088 0.293 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -611 sc-eQTL 4.52e-01 0.0418 0.0554 0.293 B_Memory LOneK1K
ENSG00000162517 PEF1 -887733 sc-eQTL 5.17e-01 0.0596 0.0918 0.293 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 38659 sc-eQTL 2.86e-01 0.0783 0.0732 0.293 B_Memory LOneK1K
ENSG00000287510 AL137857.1 25470 sc-eQTL 6.93e-01 -0.0316 0.0799 0.293 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -539625 sc-eQTL 9.61e-01 0.00471 0.0958 0.293 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 7.89e-01 0.0203 0.0757 0.293 B_Naive LOneK1K
ENSG00000134644 PUM1 -308828 sc-eQTL 2.96e-01 0.0749 0.0714 0.293 B_Naive LOneK1K
ENSG00000162510 MATN1 33578 sc-eQTL 9.82e-01 0.00158 0.069 0.293 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -611 sc-eQTL 1.58e-01 0.0684 0.0483 0.293 B_Naive LOneK1K
ENSG00000162517 PEF1 -887733 sc-eQTL 9.07e-01 -0.0104 0.0887 0.293 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 38659 sc-eQTL 2.12e-01 0.0782 0.0625 0.293 B_Naive LOneK1K
ENSG00000287510 AL137857.1 25470 sc-eQTL 8.99e-01 0.0095 0.0745 0.293 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -539625 sc-eQTL 5.60e-02 -0.154 0.0803 0.293 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 5.49e-01 -0.055 0.0916 0.293 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -308828 sc-eQTL 3.33e-01 0.0566 0.0584 0.293 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -611 sc-eQTL 7.34e-02 0.0918 0.051 0.293 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -151595 sc-eQTL 3.86e-01 0.091 0.105 0.293 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -887733 sc-eQTL 8.43e-01 -0.0147 0.0738 0.293 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -652402 sc-eQTL 2.96e-01 -0.113 0.108 0.293 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -749063 sc-eQTL 3.77e-01 -0.0782 0.0883 0.293 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 25470 sc-eQTL 8.63e-01 -0.0143 0.0828 0.293 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -539625 sc-eQTL 7.93e-02 -0.159 0.0903 0.291 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 5.52e-01 -0.0593 0.0995 0.291 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -308828 sc-eQTL 2.35e-01 0.0968 0.0813 0.291 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -611 sc-eQTL 9.92e-02 0.107 0.0648 0.291 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -151595 sc-eQTL 4.53e-01 0.0716 0.0952 0.291 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -887733 sc-eQTL 3.89e-01 0.0747 0.0865 0.291 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -652402 sc-eQTL 6.76e-01 -0.0413 0.0988 0.291 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -749063 sc-eQTL 5.73e-02 -0.178 0.093 0.291 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 25470 sc-eQTL 8.67e-02 0.161 0.0933 0.291 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -539625 sc-eQTL 2.04e-01 -0.124 0.0976 0.291 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -539819 sc-eQTL 6.23e-01 -0.033 0.0669 0.291 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -308828 sc-eQTL 3.35e-01 0.0707 0.0731 0.291 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -611 sc-eQTL 1.60e-01 0.115 0.0815 0.291 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -887733 sc-eQTL 6.76e-01 0.026 0.0622 0.291 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 38659 sc-eQTL 4.65e-01 -0.0691 0.0944 0.291 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 25470 sc-eQTL 3.11e-01 0.0826 0.0813 0.291 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000121766 ZCCHC17 -539819 eQTL 4.57e-02 0.0414 0.0207 0.0 0.0 0.276
ENSG00000168528 SERINC2 -652402 eQTL 0.00029 -0.163 0.0448 0.0 0.0 0.276
ENSG00000186056 MATN1-AS1 38659 eQTL 1.21e-02 0.0369 0.0147 0.0015 0.0 0.276

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000186056 MATN1-AS1 38659 9.15e-05 1.18e-05 1.93e-06 6.07e-06 2.44e-06 9.05e-06 1.19e-05 9.98e-07 9.55e-06 4.12e-06 8.58e-06 3.57e-06 1.93e-05 3.83e-06 2.89e-06 6.35e-06 3.8e-06 9.79e-06 2.61e-06 2.15e-06 5.46e-06 1.26e-05 7.64e-06 1.93e-06 9.38e-06 2.14e-06 4.45e-06 2.73e-06 1.3e-05 7.22e-06 4.13e-06 4.03e-07 1.25e-06 2.76e-06 2.22e-06 1.12e-06 1.09e-06 1.35e-06 1.32e-06 9.77e-07 8.05e-07 1.59e-05 2.66e-06 1.52e-07 9.39e-07 9.83e-07 1.94e-06 6.8e-07 4.67e-07