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Genes within 1Mb (chr1:30753493:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -543295 sc-eQTL 2.78e-01 0.0912 0.0838 0.694 B L1
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 1.44e-01 -0.0983 0.067 0.694 B L1
ENSG00000134644 PUM1 -312498 sc-eQTL 4.10e-01 0.0465 0.0564 0.694 B L1
ENSG00000162510 MATN1 29908 sc-eQTL 5.84e-02 -0.112 0.0589 0.694 B L1
ENSG00000162511 LAPTM5 -4281 sc-eQTL 5.99e-01 0.0245 0.0465 0.694 B L1
ENSG00000162517 PEF1 -891403 sc-eQTL 8.59e-01 -0.0125 0.0702 0.694 B L1
ENSG00000186056 MATN1-AS1 34989 sc-eQTL 1.53e-02 -0.131 0.0537 0.694 B L1
ENSG00000287510 AL137857.1 21800 sc-eQTL 1.38e-01 -0.0955 0.0642 0.694 B L1
ENSG00000060688 SNRNP40 -543295 sc-eQTL 7.47e-01 -0.0235 0.0728 0.694 CD4T L1
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 6.03e-01 0.0296 0.0569 0.694 CD4T L1
ENSG00000134644 PUM1 -312498 sc-eQTL 1.51e-01 0.0727 0.0504 0.694 CD4T L1
ENSG00000162511 LAPTM5 -4281 sc-eQTL 1.14e-03 -0.181 0.0548 0.694 CD4T L1
ENSG00000162517 PEF1 -891403 sc-eQTL 6.51e-01 -0.0266 0.0587 0.694 CD4T L1
ENSG00000186056 MATN1-AS1 34989 sc-eQTL 8.01e-01 -0.0127 0.0502 0.694 CD4T L1
ENSG00000287510 AL137857.1 21800 sc-eQTL 2.82e-01 0.0647 0.06 0.694 CD4T L1
ENSG00000060688 SNRNP40 -543295 sc-eQTL 5.06e-01 -0.0644 0.0966 0.694 CD8T L1
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 2.64e-01 -0.0718 0.0642 0.694 CD8T L1
ENSG00000134644 PUM1 -312498 sc-eQTL 3.63e-01 0.0515 0.0566 0.694 CD8T L1
ENSG00000162511 LAPTM5 -4281 sc-eQTL 5.51e-01 -0.0328 0.055 0.694 CD8T L1
ENSG00000162517 PEF1 -891403 sc-eQTL 3.31e-01 0.066 0.0677 0.694 CD8T L1
ENSG00000186056 MATN1-AS1 34989 sc-eQTL 1.42e-01 -0.0945 0.0642 0.694 CD8T L1
ENSG00000287510 AL137857.1 21800 sc-eQTL 8.57e-01 -0.0146 0.0811 0.694 CD8T L1
ENSG00000060688 SNRNP40 -543295 sc-eQTL 7.62e-01 -0.0262 0.0861 0.694 DC L1
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 3.02e-01 -0.105 0.102 0.694 DC L1
ENSG00000134644 PUM1 -312498 sc-eQTL 6.08e-01 0.041 0.0798 0.694 DC L1
ENSG00000162511 LAPTM5 -4281 sc-eQTL 4.23e-02 0.115 0.0564 0.694 DC L1
ENSG00000162517 PEF1 -891403 sc-eQTL 7.77e-01 0.0262 0.0924 0.694 DC L1
ENSG00000168528 SERINC2 -656072 sc-eQTL 1.67e-01 0.13 0.0936 0.694 DC L1
ENSG00000284543 LINC01226 -752733 sc-eQTL 9.99e-01 -9.72e-05 0.0623 0.694 DC L1
ENSG00000287510 AL137857.1 21800 sc-eQTL 8.37e-01 0.0185 0.0902 0.694 DC L1
ENSG00000060688 SNRNP40 -543295 sc-eQTL 9.20e-01 0.00665 0.0659 0.694 Mono L1
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 5.00e-01 -0.0552 0.0817 0.694 Mono L1
ENSG00000134644 PUM1 -312498 sc-eQTL 6.58e-01 -0.0232 0.0524 0.694 Mono L1
ENSG00000162511 LAPTM5 -4281 sc-eQTL 2.65e-02 0.106 0.0476 0.694 Mono L1
ENSG00000162512 SDC3 -155265 sc-eQTL 7.21e-02 -0.166 0.0919 0.694 Mono L1
ENSG00000162517 PEF1 -891403 sc-eQTL 7.91e-01 0.0173 0.065 0.694 Mono L1
ENSG00000168528 SERINC2 -656072 sc-eQTL 9.70e-01 0.00372 0.0994 0.694 Mono L1
ENSG00000284543 LINC01226 -752733 sc-eQTL 8.66e-01 0.0148 0.0876 0.694 Mono L1
ENSG00000287510 AL137857.1 21800 sc-eQTL 7.14e-01 0.0281 0.0765 0.694 Mono L1
ENSG00000060688 SNRNP40 -543295 sc-eQTL 1.83e-01 -0.123 0.0924 0.693 NK L1
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 6.68e-01 -0.0273 0.0635 0.693 NK L1
ENSG00000134644 PUM1 -312498 sc-eQTL 8.44e-01 0.0131 0.0666 0.693 NK L1
ENSG00000162511 LAPTM5 -4281 sc-eQTL 3.61e-07 0.379 0.0721 0.693 NK L1
ENSG00000162517 PEF1 -891403 sc-eQTL 5.30e-01 0.0352 0.0559 0.693 NK L1
ENSG00000186056 MATN1-AS1 34989 sc-eQTL 1.17e-01 -0.135 0.0857 0.693 NK L1
ENSG00000287510 AL137857.1 21800 sc-eQTL 1.54e-02 0.192 0.0784 0.693 NK L1
ENSG00000060688 SNRNP40 -543295 sc-eQTL 5.12e-01 0.0464 0.0706 0.694 Other_T L1
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 9.95e-01 0.000447 0.0756 0.694 Other_T L1
ENSG00000134644 PUM1 -312498 sc-eQTL 2.12e-01 0.0847 0.0677 0.694 Other_T L1
ENSG00000162511 LAPTM5 -4281 sc-eQTL 1.44e-01 -0.0812 0.0554 0.694 Other_T L1
ENSG00000162517 PEF1 -891403 sc-eQTL 6.85e-01 0.0302 0.0744 0.694 Other_T L1
ENSG00000186056 MATN1-AS1 34989 sc-eQTL 6.63e-03 -0.246 0.0896 0.694 Other_T L1
ENSG00000287510 AL137857.1 21800 sc-eQTL 7.48e-01 -0.0305 0.095 0.694 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -543295 sc-eQTL 9.07e-01 0.0127 0.109 0.686 B_Activated L2
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 1.62e-01 -0.153 0.109 0.686 B_Activated L2
ENSG00000134644 PUM1 -312498 sc-eQTL 1.46e-01 -0.148 0.101 0.686 B_Activated L2
ENSG00000162510 MATN1 29908 sc-eQTL 2.64e-01 0.0994 0.0886 0.686 B_Activated L2
ENSG00000162511 LAPTM5 -4281 sc-eQTL 2.80e-01 -0.0671 0.0618 0.686 B_Activated L2
ENSG00000162517 PEF1 -891403 sc-eQTL 4.84e-01 -0.074 0.105 0.686 B_Activated L2
ENSG00000186056 MATN1-AS1 34989 sc-eQTL 9.56e-03 -0.257 0.0982 0.686 B_Activated L2
ENSG00000287510 AL137857.1 21800 sc-eQTL 4.26e-01 -0.0706 0.0885 0.686 B_Activated L2
ENSG00000060688 SNRNP40 -543295 sc-eQTL 9.04e-01 0.0125 0.103 0.695 B_Intermediate L2
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 7.80e-01 -0.024 0.086 0.695 B_Intermediate L2
ENSG00000134644 PUM1 -312498 sc-eQTL 4.85e-01 -0.0567 0.081 0.695 B_Intermediate L2
ENSG00000162510 MATN1 29908 sc-eQTL 6.92e-02 -0.153 0.0838 0.695 B_Intermediate L2
ENSG00000162511 LAPTM5 -4281 sc-eQTL 1.19e-01 -0.0806 0.0515 0.695 B_Intermediate L2
ENSG00000162517 PEF1 -891403 sc-eQTL 8.43e-01 -0.0191 0.0962 0.695 B_Intermediate L2
ENSG00000186056 MATN1-AS1 34989 sc-eQTL 2.73e-01 0.0797 0.0725 0.695 B_Intermediate L2
ENSG00000287510 AL137857.1 21800 sc-eQTL 1.35e-01 -0.121 0.0809 0.695 B_Intermediate L2
ENSG00000060688 SNRNP40 -543295 sc-eQTL 2.09e-01 0.127 0.1 0.696 B_Memory L2
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 9.90e-01 0.00116 0.0929 0.696 B_Memory L2
ENSG00000134644 PUM1 -312498 sc-eQTL 7.79e-01 -0.0227 0.0809 0.696 B_Memory L2
ENSG00000162510 MATN1 29908 sc-eQTL 9.13e-01 -0.00844 0.0774 0.696 B_Memory L2
ENSG00000162511 LAPTM5 -4281 sc-eQTL 3.27e-01 -0.0673 0.0684 0.696 B_Memory L2
ENSG00000162517 PEF1 -891403 sc-eQTL 2.97e-01 -0.0954 0.0913 0.696 B_Memory L2
ENSG00000186056 MATN1-AS1 34989 sc-eQTL 6.32e-01 -0.0377 0.0784 0.696 B_Memory L2
ENSG00000287510 AL137857.1 21800 sc-eQTL 3.46e-01 -0.0867 0.0917 0.696 B_Memory L2
ENSG00000060688 SNRNP40 -543295 sc-eQTL 1.06e-01 0.148 0.0911 0.694 B_Naive1 L2
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 2.76e-01 -0.0862 0.0789 0.694 B_Naive1 L2
ENSG00000134644 PUM1 -312498 sc-eQTL 2.35e-01 0.0828 0.0696 0.694 B_Naive1 L2
ENSG00000162510 MATN1 29908 sc-eQTL 1.31e-01 -0.107 0.0704 0.694 B_Naive1 L2
ENSG00000162511 LAPTM5 -4281 sc-eQTL 8.08e-01 0.0115 0.0473 0.694 B_Naive1 L2
ENSG00000162517 PEF1 -891403 sc-eQTL 7.52e-01 0.0264 0.0834 0.694 B_Naive1 L2
ENSG00000186056 MATN1-AS1 34989 sc-eQTL 2.06e-02 -0.143 0.0614 0.694 B_Naive1 L2
ENSG00000287510 AL137857.1 21800 sc-eQTL 2.30e-01 -0.0921 0.0765 0.694 B_Naive1 L2
ENSG00000060688 SNRNP40 -543295 sc-eQTL 8.16e-01 -0.0226 0.097 0.697 B_Naive2 L2
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 8.01e-01 -0.0203 0.0801 0.697 B_Naive2 L2
ENSG00000134644 PUM1 -312498 sc-eQTL 9.25e-01 -0.00736 0.0784 0.697 B_Naive2 L2
ENSG00000162510 MATN1 29908 sc-eQTL 7.79e-01 -0.0212 0.0752 0.697 B_Naive2 L2
ENSG00000162511 LAPTM5 -4281 sc-eQTL 2.48e-01 -0.059 0.0509 0.697 B_Naive2 L2
ENSG00000162517 PEF1 -891403 sc-eQTL 6.36e-01 0.044 0.0929 0.697 B_Naive2 L2
ENSG00000186056 MATN1-AS1 34989 sc-eQTL 7.33e-02 -0.133 0.0738 0.697 B_Naive2 L2
ENSG00000287510 AL137857.1 21800 sc-eQTL 7.55e-01 -0.0251 0.0803 0.697 B_Naive2 L2
ENSG00000060688 SNRNP40 -543295 sc-eQTL 8.16e-02 -0.167 0.0957 0.693 CD4_CTL L2
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 4.71e-01 0.0683 0.0947 0.693 CD4_CTL L2
ENSG00000134644 PUM1 -312498 sc-eQTL 8.95e-01 -0.0123 0.093 0.693 CD4_CTL L2
ENSG00000162511 LAPTM5 -4281 sc-eQTL 8.46e-01 -0.0161 0.0829 0.693 CD4_CTL L2
ENSG00000162517 PEF1 -891403 sc-eQTL 9.20e-01 -0.00856 0.085 0.693 CD4_CTL L2
ENSG00000186056 MATN1-AS1 34989 sc-eQTL 7.66e-01 -0.0271 0.0906 0.693 CD4_CTL L2
ENSG00000287510 AL137857.1 21800 sc-eQTL 8.57e-01 -0.0144 0.08 0.693 CD4_CTL L2
ENSG00000060688 SNRNP40 -543295 sc-eQTL 9.95e-01 -0.000454 0.0763 0.694 CD4_Naive L2
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 6.88e-01 0.0272 0.0676 0.694 CD4_Naive L2
ENSG00000134644 PUM1 -312498 sc-eQTL 4.18e-01 0.0438 0.0539 0.694 CD4_Naive L2
ENSG00000162511 LAPTM5 -4281 sc-eQTL 8.51e-05 -0.224 0.0558 0.694 CD4_Naive L2
ENSG00000162517 PEF1 -891403 sc-eQTL 1.17e-01 -0.0993 0.0631 0.694 CD4_Naive L2
ENSG00000186056 MATN1-AS1 34989 sc-eQTL 7.51e-01 -0.0186 0.0587 0.694 CD4_Naive L2
ENSG00000287510 AL137857.1 21800 sc-eQTL 8.81e-01 0.0101 0.0674 0.694 CD4_Naive L2
ENSG00000060688 SNRNP40 -543295 sc-eQTL 6.48e-01 0.0442 0.0965 0.694 CD4_TCM L2
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 6.32e-01 0.0373 0.0778 0.694 CD4_TCM L2
ENSG00000134644 PUM1 -312498 sc-eQTL 4.35e-01 0.0539 0.0688 0.694 CD4_TCM L2
ENSG00000162511 LAPTM5 -4281 sc-eQTL 2.86e-01 -0.061 0.057 0.694 CD4_TCM L2
ENSG00000162517 PEF1 -891403 sc-eQTL 6.76e-01 0.032 0.0766 0.694 CD4_TCM L2
ENSG00000186056 MATN1-AS1 34989 sc-eQTL 6.22e-01 0.0358 0.0725 0.694 CD4_TCM L2
ENSG00000287510 AL137857.1 21800 sc-eQTL 2.25e-01 0.0981 0.0805 0.694 CD4_TCM L2
ENSG00000060688 SNRNP40 -543295 sc-eQTL 3.88e-01 0.0831 0.096 0.694 CD4_TEM L2
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 1.66e-01 -0.127 0.0912 0.694 CD4_TEM L2
ENSG00000134644 PUM1 -312498 sc-eQTL 8.40e-01 -0.0155 0.0763 0.694 CD4_TEM L2
ENSG00000162511 LAPTM5 -4281 sc-eQTL 1.34e-01 -0.116 0.0768 0.694 CD4_TEM L2
ENSG00000162517 PEF1 -891403 sc-eQTL 8.13e-02 0.15 0.0859 0.694 CD4_TEM L2
ENSG00000186056 MATN1-AS1 34989 sc-eQTL 9.11e-01 -0.0101 0.0903 0.694 CD4_TEM L2
ENSG00000287510 AL137857.1 21800 sc-eQTL 2.71e-01 0.0979 0.0888 0.694 CD4_TEM L2
ENSG00000060688 SNRNP40 -543295 sc-eQTL 3.44e-01 -0.0999 0.105 0.694 CD8_CTL L2
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 5.38e-01 -0.05 0.0809 0.694 CD8_CTL L2
ENSG00000134644 PUM1 -312498 sc-eQTL 7.69e-01 0.0231 0.0786 0.694 CD8_CTL L2
ENSG00000162511 LAPTM5 -4281 sc-eQTL 3.56e-01 0.0804 0.0869 0.694 CD8_CTL L2
ENSG00000162517 PEF1 -891403 sc-eQTL 2.23e-01 0.0923 0.0756 0.694 CD8_CTL L2
ENSG00000186056 MATN1-AS1 34989 sc-eQTL 4.41e-01 -0.0706 0.0914 0.694 CD8_CTL L2
ENSG00000287510 AL137857.1 21800 sc-eQTL 3.04e-01 0.0886 0.0859 0.694 CD8_CTL L2
ENSG00000060688 SNRNP40 -543295 sc-eQTL 3.87e-01 -0.0824 0.0951 0.694 CD8_Naive L2
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 3.22e-01 -0.0814 0.082 0.694 CD8_Naive L2
ENSG00000134644 PUM1 -312498 sc-eQTL 7.85e-01 -0.0181 0.0661 0.694 CD8_Naive L2
ENSG00000162511 LAPTM5 -4281 sc-eQTL 7.12e-04 -0.212 0.0617 0.694 CD8_Naive L2
ENSG00000162517 PEF1 -891403 sc-eQTL 3.20e-01 -0.0876 0.0879 0.694 CD8_Naive L2
ENSG00000186056 MATN1-AS1 34989 sc-eQTL 3.06e-01 -0.081 0.0789 0.694 CD8_Naive L2
ENSG00000287510 AL137857.1 21800 sc-eQTL 7.93e-01 -0.0226 0.0861 0.694 CD8_Naive L2
ENSG00000060688 SNRNP40 -543295 sc-eQTL 9.66e-02 -0.176 0.106 0.697 CD8_TCM L2
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 2.43e-01 -0.114 0.0971 0.697 CD8_TCM L2
ENSG00000134644 PUM1 -312498 sc-eQTL 5.81e-02 0.173 0.0908 0.697 CD8_TCM L2
ENSG00000162511 LAPTM5 -4281 sc-eQTL 2.81e-01 -0.103 0.0956 0.697 CD8_TCM L2
ENSG00000162517 PEF1 -891403 sc-eQTL 4.19e-01 0.0792 0.0979 0.697 CD8_TCM L2
ENSG00000186056 MATN1-AS1 34989 sc-eQTL 7.09e-01 0.0332 0.0888 0.697 CD8_TCM L2
ENSG00000287510 AL137857.1 21800 sc-eQTL 7.88e-01 0.0241 0.0897 0.697 CD8_TCM L2
ENSG00000060688 SNRNP40 -543295 sc-eQTL 8.33e-01 -0.0217 0.102 0.701 CD8_TEM L2
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 9.60e-01 -0.00496 0.0983 0.701 CD8_TEM L2
ENSG00000134644 PUM1 -312498 sc-eQTL 1.64e-01 0.14 0.1 0.701 CD8_TEM L2
ENSG00000162511 LAPTM5 -4281 sc-eQTL 6.98e-01 -0.0366 0.0944 0.701 CD8_TEM L2
ENSG00000162517 PEF1 -891403 sc-eQTL 1.88e-01 0.117 0.0885 0.701 CD8_TEM L2
ENSG00000186056 MATN1-AS1 34989 sc-eQTL 8.83e-01 -0.0144 0.098 0.701 CD8_TEM L2
ENSG00000287510 AL137857.1 21800 sc-eQTL 6.91e-01 -0.0353 0.0887 0.701 CD8_TEM L2
ENSG00000060688 SNRNP40 -543295 sc-eQTL 5.19e-01 0.0662 0.102 0.695 MAIT L2
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 6.94e-01 -0.0358 0.0908 0.695 MAIT L2
ENSG00000134644 PUM1 -312498 sc-eQTL 1.64e-01 0.121 0.0867 0.695 MAIT L2
ENSG00000162511 LAPTM5 -4281 sc-eQTL 2.41e-02 -0.184 0.0811 0.695 MAIT L2
ENSG00000162517 PEF1 -891403 sc-eQTL 9.90e-01 0.00115 0.0902 0.695 MAIT L2
ENSG00000186056 MATN1-AS1 34989 sc-eQTL 1.59e-02 -0.219 0.0902 0.695 MAIT L2
ENSG00000287510 AL137857.1 21800 sc-eQTL 3.79e-01 0.0829 0.0941 0.695 MAIT L2
ENSG00000060688 SNRNP40 -543295 sc-eQTL 9.15e-01 0.011 0.102 0.696 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 6.76e-02 -0.157 0.0854 0.696 NK_CD56bright L2
ENSG00000134644 PUM1 -312498 sc-eQTL 5.96e-01 0.048 0.0904 0.696 NK_CD56bright L2
ENSG00000162511 LAPTM5 -4281 sc-eQTL 1.15e-04 0.338 0.086 0.696 NK_CD56bright L2
ENSG00000162517 PEF1 -891403 sc-eQTL 7.19e-01 -0.0312 0.0867 0.696 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 34989 sc-eQTL 6.87e-01 -0.0362 0.0896 0.696 NK_CD56bright L2
ENSG00000287510 AL137857.1 21800 sc-eQTL 3.45e-01 0.0835 0.0882 0.696 NK_CD56bright L2
ENSG00000060688 SNRNP40 -543295 sc-eQTL 8.58e-01 0.0175 0.0976 0.692 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 8.11e-01 0.0172 0.0722 0.692 NK_CD56dim L2
ENSG00000134644 PUM1 -312498 sc-eQTL 8.61e-01 0.013 0.074 0.692 NK_CD56dim L2
ENSG00000162511 LAPTM5 -4281 sc-eQTL 1.22e-05 0.338 0.0754 0.692 NK_CD56dim L2
ENSG00000162517 PEF1 -891403 sc-eQTL 4.97e-01 -0.0477 0.0702 0.692 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 34989 sc-eQTL 1.67e-01 -0.136 0.0985 0.692 NK_CD56dim L2
ENSG00000287510 AL137857.1 21800 sc-eQTL 8.37e-02 0.141 0.081 0.692 NK_CD56dim L2
ENSG00000060688 SNRNP40 -543295 sc-eQTL 1.20e-01 -0.165 0.106 0.694 NK_HLA L2
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 4.04e-01 -0.0794 0.0949 0.694 NK_HLA L2
ENSG00000134644 PUM1 -312498 sc-eQTL 1.79e-01 0.124 0.0922 0.694 NK_HLA L2
ENSG00000162511 LAPTM5 -4281 sc-eQTL 1.05e-04 0.337 0.0851 0.694 NK_HLA L2
ENSG00000162517 PEF1 -891403 sc-eQTL 3.70e-01 -0.0894 0.0994 0.694 NK_HLA L2
ENSG00000186056 MATN1-AS1 34989 sc-eQTL 1.49e-01 0.135 0.0936 0.694 NK_HLA L2
ENSG00000287510 AL137857.1 21800 sc-eQTL 9.96e-01 0.000444 0.0909 0.694 NK_HLA L2
ENSG00000060688 SNRNP40 -543295 sc-eQTL 2.37e-01 -0.113 0.0955 0.692 NK_cytokine L2
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 8.09e-01 -0.0181 0.0748 0.692 NK_cytokine L2
ENSG00000134644 PUM1 -312498 sc-eQTL 6.91e-01 -0.0322 0.0808 0.692 NK_cytokine L2
ENSG00000162511 LAPTM5 -4281 sc-eQTL 6.15e-06 0.393 0.0848 0.692 NK_cytokine L2
ENSG00000162517 PEF1 -891403 sc-eQTL 7.94e-02 0.133 0.0753 0.692 NK_cytokine L2
ENSG00000186056 MATN1-AS1 34989 sc-eQTL 5.63e-01 -0.0546 0.0943 0.692 NK_cytokine L2
ENSG00000287510 AL137857.1 21800 sc-eQTL 8.71e-01 0.0143 0.0878 0.692 NK_cytokine L2
ENSG00000060688 SNRNP40 -543295 sc-eQTL 2.79e-01 -0.117 0.108 0.659 PB L2
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 8.61e-01 -0.022 0.126 0.659 PB L2
ENSG00000134644 PUM1 -312498 sc-eQTL 3.61e-01 0.0996 0.109 0.659 PB L2
ENSG00000162510 MATN1 29908 sc-eQTL 7.96e-01 -0.0263 0.102 0.659 PB L2
ENSG00000162511 LAPTM5 -4281 sc-eQTL 1.95e-01 0.0939 0.0721 0.659 PB L2
ENSG00000162517 PEF1 -891403 sc-eQTL 4.83e-01 -0.0786 0.112 0.659 PB L2
ENSG00000186056 MATN1-AS1 34989 sc-eQTL 3.20e-01 -0.099 0.099 0.659 PB L2
ENSG00000287510 AL137857.1 21800 sc-eQTL 5.50e-01 0.0633 0.106 0.659 PB L2
ENSG00000060688 SNRNP40 -543295 sc-eQTL 5.62e-01 0.0435 0.0749 0.696 Pro_T L2
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 8.03e-01 0.0238 0.0951 0.696 Pro_T L2
ENSG00000134644 PUM1 -312498 sc-eQTL 5.30e-01 0.0558 0.0887 0.696 Pro_T L2
ENSG00000162511 LAPTM5 -4281 sc-eQTL 3.67e-01 0.0575 0.0635 0.696 Pro_T L2
ENSG00000162517 PEF1 -891403 sc-eQTL 5.20e-01 -0.0602 0.0933 0.696 Pro_T L2
ENSG00000186056 MATN1-AS1 34989 sc-eQTL 2.33e-01 0.106 0.0887 0.696 Pro_T L2
ENSG00000287510 AL137857.1 21800 sc-eQTL 9.93e-01 0.00075 0.0818 0.696 Pro_T L2
ENSG00000060688 SNRNP40 -543295 sc-eQTL 1.42e-01 -0.145 0.0981 0.694 Treg L2
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 5.04e-01 0.0638 0.0953 0.694 Treg L2
ENSG00000134644 PUM1 -312498 sc-eQTL 4.38e-01 0.0592 0.0763 0.694 Treg L2
ENSG00000162511 LAPTM5 -4281 sc-eQTL 8.63e-01 -0.0151 0.0874 0.694 Treg L2
ENSG00000162517 PEF1 -891403 sc-eQTL 8.51e-01 0.0178 0.0945 0.694 Treg L2
ENSG00000186056 MATN1-AS1 34989 sc-eQTL 6.85e-01 0.0362 0.0891 0.694 Treg L2
ENSG00000287510 AL137857.1 21800 sc-eQTL 6.59e-01 0.0393 0.089 0.694 Treg L2
ENSG00000060688 SNRNP40 -543295 sc-eQTL 7.75e-01 0.0287 0.1 0.698 cDC L2
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 5.75e-02 -0.205 0.107 0.698 cDC L2
ENSG00000134644 PUM1 -312498 sc-eQTL 2.34e-01 0.111 0.0927 0.698 cDC L2
ENSG00000162511 LAPTM5 -4281 sc-eQTL 1.87e-01 0.0861 0.0649 0.698 cDC L2
ENSG00000162517 PEF1 -891403 sc-eQTL 7.66e-01 0.0281 0.0944 0.698 cDC L2
ENSG00000168528 SERINC2 -656072 sc-eQTL 6.18e-01 0.0418 0.0837 0.698 cDC L2
ENSG00000284543 LINC01226 -752733 sc-eQTL 8.33e-01 -0.0174 0.0823 0.698 cDC L2
ENSG00000287510 AL137857.1 21800 sc-eQTL 6.63e-01 0.0386 0.0885 0.698 cDC L2
ENSG00000060688 SNRNP40 -543295 sc-eQTL 5.13e-01 0.0519 0.0792 0.694 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 5.52e-01 -0.0527 0.0884 0.694 cMono_IL1B L2
ENSG00000134644 PUM1 -312498 sc-eQTL 8.56e-01 -0.0109 0.0599 0.694 cMono_IL1B L2
ENSG00000162511 LAPTM5 -4281 sc-eQTL 8.01e-02 0.0918 0.0522 0.694 cMono_IL1B L2
ENSG00000162512 SDC3 -155265 sc-eQTL 8.26e-01 -0.0218 0.099 0.694 cMono_IL1B L2
ENSG00000162517 PEF1 -891403 sc-eQTL 5.31e-01 0.0507 0.0808 0.694 cMono_IL1B L2
ENSG00000168528 SERINC2 -656072 sc-eQTL 6.82e-01 -0.0411 0.1 0.694 cMono_IL1B L2
ENSG00000284543 LINC01226 -752733 sc-eQTL 1.81e-01 0.118 0.0882 0.694 cMono_IL1B L2
ENSG00000287510 AL137857.1 21800 sc-eQTL 7.86e-01 0.0225 0.0826 0.694 cMono_IL1B L2
ENSG00000060688 SNRNP40 -543295 sc-eQTL 3.07e-01 -0.0855 0.0835 0.694 cMono_S100A L2
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 7.68e-01 -0.0292 0.0989 0.694 cMono_S100A L2
ENSG00000134644 PUM1 -312498 sc-eQTL 5.52e-01 -0.0425 0.0715 0.694 cMono_S100A L2
ENSG00000162511 LAPTM5 -4281 sc-eQTL 3.74e-01 0.0489 0.0549 0.694 cMono_S100A L2
ENSG00000162512 SDC3 -155265 sc-eQTL 1.85e-01 -0.126 0.0946 0.694 cMono_S100A L2
ENSG00000162517 PEF1 -891403 sc-eQTL 5.20e-01 -0.0552 0.0857 0.694 cMono_S100A L2
ENSG00000168528 SERINC2 -656072 sc-eQTL 6.67e-01 -0.0433 0.101 0.694 cMono_S100A L2
ENSG00000284543 LINC01226 -752733 sc-eQTL 7.86e-01 -0.0222 0.0817 0.694 cMono_S100A L2
ENSG00000287510 AL137857.1 21800 sc-eQTL 4.34e-01 0.0642 0.0819 0.694 cMono_S100A L2
ENSG00000060688 SNRNP40 -543295 sc-eQTL 6.23e-01 -0.0601 0.122 0.694 gdT L2
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 4.93e-02 0.205 0.103 0.694 gdT L2
ENSG00000134644 PUM1 -312498 sc-eQTL 7.56e-01 -0.0336 0.108 0.694 gdT L2
ENSG00000162511 LAPTM5 -4281 sc-eQTL 4.65e-01 0.0857 0.117 0.694 gdT L2
ENSG00000162517 PEF1 -891403 sc-eQTL 3.46e-01 -0.101 0.107 0.694 gdT L2
ENSG00000186056 MATN1-AS1 34989 sc-eQTL 2.21e-01 -0.132 0.108 0.694 gdT L2
ENSG00000287510 AL137857.1 21800 sc-eQTL 9.12e-01 0.0116 0.105 0.694 gdT L2
ENSG00000060688 SNRNP40 -543295 sc-eQTL 4.98e-01 -0.0641 0.0943 0.696 intMono L2
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 5.24e-01 0.0647 0.101 0.696 intMono L2
ENSG00000134644 PUM1 -312498 sc-eQTL 1.61e-01 0.121 0.0857 0.696 intMono L2
ENSG00000162511 LAPTM5 -4281 sc-eQTL 6.22e-02 0.126 0.067 0.696 intMono L2
ENSG00000162512 SDC3 -155265 sc-eQTL 2.10e-01 -0.116 0.0922 0.696 intMono L2
ENSG00000162517 PEF1 -891403 sc-eQTL 1.93e-01 0.126 0.0968 0.696 intMono L2
ENSG00000168528 SERINC2 -656072 sc-eQTL 8.16e-01 -0.0226 0.0968 0.696 intMono L2
ENSG00000284543 LINC01226 -752733 sc-eQTL 4.00e-01 -0.0773 0.0916 0.696 intMono L2
ENSG00000287510 AL137857.1 21800 sc-eQTL 5.92e-01 0.0493 0.0917 0.696 intMono L2
ENSG00000060688 SNRNP40 -543295 sc-eQTL 3.52e-01 -0.0836 0.0896 0.692 ncMono L2
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 5.50e-01 -0.0572 0.0956 0.692 ncMono L2
ENSG00000134644 PUM1 -312498 sc-eQTL 4.44e-01 -0.0598 0.0781 0.692 ncMono L2
ENSG00000162511 LAPTM5 -4281 sc-eQTL 3.43e-01 0.0673 0.0709 0.692 ncMono L2
ENSG00000162512 SDC3 -155265 sc-eQTL 5.65e-01 -0.0459 0.0796 0.692 ncMono L2
ENSG00000162517 PEF1 -891403 sc-eQTL 4.86e-01 -0.0636 0.0912 0.692 ncMono L2
ENSG00000168528 SERINC2 -656072 sc-eQTL 4.10e-01 0.0716 0.0868 0.692 ncMono L2
ENSG00000284543 LINC01226 -752733 sc-eQTL 2.79e-01 -0.094 0.0866 0.692 ncMono L2
ENSG00000287510 AL137857.1 21800 sc-eQTL 9.07e-01 0.0105 0.09 0.692 ncMono L2
ENSG00000060688 SNRNP40 -543295 sc-eQTL 1.45e-01 -0.15 0.102 0.703 pDC L2
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 5.53e-01 -0.067 0.113 0.703 pDC L2
ENSG00000134644 PUM1 -312498 sc-eQTL 1.40e-01 -0.138 0.093 0.703 pDC L2
ENSG00000162511 LAPTM5 -4281 sc-eQTL 6.95e-02 0.157 0.0861 0.703 pDC L2
ENSG00000162517 PEF1 -891403 sc-eQTL 8.22e-01 -0.0254 0.113 0.703 pDC L2
ENSG00000168528 SERINC2 -656072 sc-eQTL 3.32e-01 0.102 0.105 0.703 pDC L2
ENSG00000284543 LINC01226 -752733 sc-eQTL 7.97e-01 -0.0211 0.082 0.703 pDC L2
ENSG00000287510 AL137857.1 21800 sc-eQTL 8.18e-01 -0.0222 0.0964 0.703 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -543295 sc-eQTL 9.87e-01 -0.00154 0.098 0.694 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 8.00e-01 -0.0207 0.0815 0.694 B_Memory LOneK1K
ENSG00000134644 PUM1 -312498 sc-eQTL 2.47e-01 -0.0836 0.072 0.694 B_Memory LOneK1K
ENSG00000162510 MATN1 29908 sc-eQTL 3.80e-01 -0.0723 0.0822 0.694 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -4281 sc-eQTL 2.12e-02 -0.119 0.0511 0.694 B_Memory LOneK1K
ENSG00000162517 PEF1 -891403 sc-eQTL 9.82e-01 0.00191 0.0858 0.694 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 34989 sc-eQTL 6.08e-01 -0.0351 0.0684 0.694 B_Memory LOneK1K
ENSG00000287510 AL137857.1 21800 sc-eQTL 2.03e-02 -0.172 0.0737 0.694 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -543295 sc-eQTL 2.10e-01 0.112 0.0888 0.694 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 3.73e-01 -0.0628 0.0703 0.694 B_Naive LOneK1K
ENSG00000134644 PUM1 -312498 sc-eQTL 2.78e-01 0.0723 0.0665 0.694 B_Naive LOneK1K
ENSG00000162510 MATN1 29908 sc-eQTL 1.74e-01 -0.0871 0.0639 0.694 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -4281 sc-eQTL 9.42e-01 -0.00328 0.0452 0.694 B_Naive LOneK1K
ENSG00000162517 PEF1 -891403 sc-eQTL 8.03e-01 0.0206 0.0825 0.694 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 34989 sc-eQTL 6.20e-03 -0.158 0.0573 0.694 B_Naive LOneK1K
ENSG00000287510 AL137857.1 21800 sc-eQTL 2.11e-01 -0.0867 0.0691 0.694 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -543295 sc-eQTL 9.09e-01 0.00864 0.0756 0.694 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 5.13e-01 -0.056 0.0855 0.694 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -312498 sc-eQTL 6.30e-01 -0.0263 0.0546 0.694 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -4281 sc-eQTL 4.74e-02 0.0948 0.0475 0.694 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -155265 sc-eQTL 3.54e-01 -0.0907 0.0977 0.694 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -891403 sc-eQTL 9.86e-01 0.00118 0.0688 0.694 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -656072 sc-eQTL 7.06e-01 -0.0381 0.101 0.694 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -752733 sc-eQTL 3.45e-01 0.078 0.0824 0.694 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 21800 sc-eQTL 5.57e-01 0.0454 0.0772 0.694 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -543295 sc-eQTL 3.73e-01 -0.0741 0.083 0.692 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 9.12e-01 0.0101 0.091 0.692 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -312498 sc-eQTL 8.16e-01 0.0173 0.0746 0.692 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -4281 sc-eQTL 7.82e-02 0.105 0.0592 0.692 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -155265 sc-eQTL 2.76e-01 -0.0949 0.0869 0.692 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -891403 sc-eQTL 3.67e-01 0.0714 0.079 0.692 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -656072 sc-eQTL 6.14e-01 0.0456 0.0903 0.692 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -752733 sc-eQTL 1.98e-01 -0.11 0.0854 0.692 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 21800 sc-eQTL 5.16e-01 0.0558 0.0858 0.692 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -543295 sc-eQTL 1.94e-01 -0.121 0.093 0.692 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -543489 sc-eQTL 8.40e-01 -0.0129 0.0638 0.692 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -312498 sc-eQTL 7.53e-01 0.022 0.0699 0.692 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -4281 sc-eQTL 6.76e-07 0.377 0.0736 0.692 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -891403 sc-eQTL 4.11e-01 0.0488 0.0592 0.692 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 34989 sc-eQTL 1.20e-01 -0.14 0.0895 0.692 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 21800 sc-eQTL 3.54e-02 0.163 0.0769 0.692 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162511 LAPTM5 -4281 eQTL 2.92e-32 0.12 0.00977 0.27 0.283 0.34
ENSG00000162512 SDC3 -155265 eQTL 0.000483 -0.0902 0.0257 0.00104 0.0 0.34
ENSG00000168528 SERINC2 -656072 eQTL 0.0356 -0.0853 0.0405 0.0 0.0 0.34
ENSG00000186056 MATN1-AS1 34989 eQTL 4.78e-02 -0.0262 0.0132 0.0 0.0 0.34

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162511 LAPTM5 -4281 9.54e-05 6.76e-05 9.38e-06 1.99e-05 8.4e-06 2.32e-05 7.11e-05 6.52e-06 5.24e-05 2.13e-05 7.27e-05 2.59e-05 9.35e-05 2.29e-05 9.51e-06 3.27e-05 2.92e-05 4.06e-05 1.15e-05 9.02e-06 2.65e-05 5.95e-05 5.41e-05 1.22e-05 7.03e-05 1.36e-05 2.16e-05 1.88e-05 6.05e-05 3.66e-05 3.18e-05 1.61e-06 2.62e-06 8.04e-06 1.66e-05 7.78e-06 3.57e-06 3.67e-06 5.92e-06 3.57e-06 1.82e-06 7.52e-05 6.26e-06 4.41e-07 3.83e-06 5.78e-06 5.75e-06 2.27e-06 1.51e-06