logo

Genes within 1Mb (chr1:30751346:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -545442 sc-eQTL 8.43e-01 -0.0159 0.08 0.438 B L1
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 8.23e-01 0.0143 0.0641 0.438 B L1
ENSG00000134644 PUM1 -314645 sc-eQTL 7.73e-02 -0.0947 0.0534 0.438 B L1
ENSG00000162510 MATN1 27761 sc-eQTL 4.33e-01 0.0443 0.0564 0.438 B L1
ENSG00000162511 LAPTM5 -6428 sc-eQTL 1.69e-02 -0.105 0.0437 0.438 B L1
ENSG00000162517 PEF1 -893550 sc-eQTL 2.74e-01 -0.0731 0.0666 0.438 B L1
ENSG00000186056 MATN1-AS1 32842 sc-eQTL 2.07e-02 -0.119 0.0512 0.438 B L1
ENSG00000287510 AL137857.1 19653 sc-eQTL 3.55e-02 -0.129 0.0608 0.438 B L1
ENSG00000060688 SNRNP40 -545442 sc-eQTL 3.35e-01 -0.0671 0.0695 0.438 CD4T L1
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 6.43e-02 -0.1 0.054 0.438 CD4T L1
ENSG00000134644 PUM1 -314645 sc-eQTL 4.78e-01 0.0344 0.0484 0.438 CD4T L1
ENSG00000162511 LAPTM5 -6428 sc-eQTL 9.92e-01 -0.00057 0.0537 0.438 CD4T L1
ENSG00000162517 PEF1 -893550 sc-eQTL 9.50e-01 -0.00353 0.0561 0.438 CD4T L1
ENSG00000186056 MATN1-AS1 32842 sc-eQTL 1.63e-02 -0.115 0.0474 0.438 CD4T L1
ENSG00000287510 AL137857.1 19653 sc-eQTL 8.60e-01 -0.0101 0.0575 0.438 CD4T L1
ENSG00000060688 SNRNP40 -545442 sc-eQTL 7.94e-01 0.0239 0.0913 0.438 CD8T L1
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 3.22e-01 0.0602 0.0606 0.438 CD8T L1
ENSG00000134644 PUM1 -314645 sc-eQTL 9.34e-01 -0.00441 0.0535 0.438 CD8T L1
ENSG00000162511 LAPTM5 -6428 sc-eQTL 1.35e-01 0.0775 0.0517 0.438 CD8T L1
ENSG00000162517 PEF1 -893550 sc-eQTL 9.74e-02 -0.106 0.0636 0.438 CD8T L1
ENSG00000186056 MATN1-AS1 32842 sc-eQTL 5.70e-01 -0.0346 0.0608 0.438 CD8T L1
ENSG00000287510 AL137857.1 19653 sc-eQTL 7.28e-01 0.0267 0.0765 0.438 CD8T L1
ENSG00000060688 SNRNP40 -545442 sc-eQTL 8.62e-01 -0.014 0.0804 0.435 DC L1
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 4.48e-01 0.0723 0.095 0.435 DC L1
ENSG00000134644 PUM1 -314645 sc-eQTL 4.63e-01 -0.0548 0.0744 0.435 DC L1
ENSG00000162511 LAPTM5 -6428 sc-eQTL 4.07e-01 0.0441 0.0531 0.435 DC L1
ENSG00000162517 PEF1 -893550 sc-eQTL 8.66e-01 -0.0146 0.0863 0.435 DC L1
ENSG00000168528 SERINC2 -658219 sc-eQTL 5.88e-01 0.0476 0.0877 0.435 DC L1
ENSG00000284543 LINC01226 -754880 sc-eQTL 1.67e-01 -0.0803 0.0579 0.435 DC L1
ENSG00000287510 AL137857.1 19653 sc-eQTL 1.10e-01 -0.134 0.0836 0.435 DC L1
ENSG00000060688 SNRNP40 -545442 sc-eQTL 4.99e-03 0.173 0.0609 0.438 Mono L1
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 6.06e-01 0.0397 0.0769 0.438 Mono L1
ENSG00000134644 PUM1 -314645 sc-eQTL 7.43e-02 -0.0878 0.0489 0.438 Mono L1
ENSG00000162511 LAPTM5 -6428 sc-eQTL 1.90e-02 -0.106 0.0448 0.438 Mono L1
ENSG00000162512 SDC3 -157412 sc-eQTL 1.49e-01 -0.126 0.0867 0.438 Mono L1
ENSG00000162517 PEF1 -893550 sc-eQTL 9.14e-01 -0.00661 0.0611 0.438 Mono L1
ENSG00000168528 SERINC2 -658219 sc-eQTL 6.39e-01 -0.044 0.0935 0.438 Mono L1
ENSG00000284543 LINC01226 -754880 sc-eQTL 1.60e-01 0.116 0.082 0.438 Mono L1
ENSG00000287510 AL137857.1 19653 sc-eQTL 8.47e-02 -0.124 0.0715 0.438 Mono L1
ENSG00000060688 SNRNP40 -545442 sc-eQTL 7.31e-01 -0.03 0.0874 0.438 NK L1
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 5.20e-01 -0.0385 0.0598 0.438 NK L1
ENSG00000134644 PUM1 -314645 sc-eQTL 8.17e-01 -0.0145 0.0627 0.438 NK L1
ENSG00000162511 LAPTM5 -6428 sc-eQTL 1.61e-01 0.101 0.0719 0.438 NK L1
ENSG00000162517 PEF1 -893550 sc-eQTL 9.12e-01 -0.00582 0.0527 0.438 NK L1
ENSG00000186056 MATN1-AS1 32842 sc-eQTL 7.17e-01 0.0294 0.0811 0.438 NK L1
ENSG00000287510 AL137857.1 19653 sc-eQTL 4.31e-01 -0.059 0.0748 0.438 NK L1
ENSG00000060688 SNRNP40 -545442 sc-eQTL 2.05e-01 0.0851 0.0669 0.438 Other_T L1
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 7.76e-01 -0.0204 0.0717 0.438 Other_T L1
ENSG00000134644 PUM1 -314645 sc-eQTL 8.20e-01 0.0147 0.0645 0.438 Other_T L1
ENSG00000162511 LAPTM5 -6428 sc-eQTL 7.02e-01 -0.0202 0.0528 0.438 Other_T L1
ENSG00000162517 PEF1 -893550 sc-eQTL 9.78e-02 0.117 0.0701 0.438 Other_T L1
ENSG00000186056 MATN1-AS1 32842 sc-eQTL 4.05e-01 0.0721 0.0864 0.438 Other_T L1
ENSG00000287510 AL137857.1 19653 sc-eQTL 4.95e-01 0.0616 0.0901 0.438 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -545442 sc-eQTL 8.56e-01 0.0186 0.103 0.444 B_Activated L2
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 7.38e-01 -0.0347 0.104 0.444 B_Activated L2
ENSG00000134644 PUM1 -314645 sc-eQTL 2.00e-01 -0.123 0.0958 0.444 B_Activated L2
ENSG00000162510 MATN1 27761 sc-eQTL 2.97e-01 -0.0876 0.0838 0.444 B_Activated L2
ENSG00000162511 LAPTM5 -6428 sc-eQTL 8.14e-02 -0.102 0.0581 0.444 B_Activated L2
ENSG00000162517 PEF1 -893550 sc-eQTL 8.65e-01 -0.017 0.0998 0.444 B_Activated L2
ENSG00000186056 MATN1-AS1 32842 sc-eQTL 8.69e-01 0.0156 0.0947 0.444 B_Activated L2
ENSG00000287510 AL137857.1 19653 sc-eQTL 2.34e-01 -0.0997 0.0835 0.444 B_Activated L2
ENSG00000060688 SNRNP40 -545442 sc-eQTL 2.07e-01 0.124 0.0978 0.44 B_Intermediate L2
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 5.36e-01 -0.0507 0.0817 0.44 B_Intermediate L2
ENSG00000134644 PUM1 -314645 sc-eQTL 5.86e-03 -0.211 0.0758 0.44 B_Intermediate L2
ENSG00000162510 MATN1 27761 sc-eQTL 7.11e-01 0.0298 0.0803 0.44 B_Intermediate L2
ENSG00000162511 LAPTM5 -6428 sc-eQTL 3.44e-01 -0.0466 0.0492 0.44 B_Intermediate L2
ENSG00000162517 PEF1 -893550 sc-eQTL 3.08e-02 -0.197 0.0905 0.44 B_Intermediate L2
ENSG00000186056 MATN1-AS1 32842 sc-eQTL 6.77e-01 -0.0288 0.0691 0.44 B_Intermediate L2
ENSG00000287510 AL137857.1 19653 sc-eQTL 1.69e-01 -0.106 0.0771 0.44 B_Intermediate L2
ENSG00000060688 SNRNP40 -545442 sc-eQTL 2.12e-01 0.118 0.0941 0.435 B_Memory L2
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 3.55e-01 -0.0806 0.0869 0.435 B_Memory L2
ENSG00000134644 PUM1 -314645 sc-eQTL 5.13e-01 0.0496 0.0757 0.435 B_Memory L2
ENSG00000162510 MATN1 27761 sc-eQTL 5.61e-01 -0.0421 0.0724 0.435 B_Memory L2
ENSG00000162511 LAPTM5 -6428 sc-eQTL 6.60e-03 -0.173 0.0631 0.435 B_Memory L2
ENSG00000162517 PEF1 -893550 sc-eQTL 4.26e-01 -0.0684 0.0857 0.435 B_Memory L2
ENSG00000186056 MATN1-AS1 32842 sc-eQTL 2.02e-01 -0.0936 0.0732 0.435 B_Memory L2
ENSG00000287510 AL137857.1 19653 sc-eQTL 3.91e-01 -0.0738 0.0859 0.435 B_Memory L2
ENSG00000060688 SNRNP40 -545442 sc-eQTL 8.06e-01 0.0215 0.0873 0.438 B_Naive1 L2
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 4.66e-01 0.055 0.0753 0.438 B_Naive1 L2
ENSG00000134644 PUM1 -314645 sc-eQTL 4.02e-01 -0.0557 0.0664 0.438 B_Naive1 L2
ENSG00000162510 MATN1 27761 sc-eQTL 3.63e-01 0.0613 0.0673 0.438 B_Naive1 L2
ENSG00000162511 LAPTM5 -6428 sc-eQTL 3.36e-02 -0.0953 0.0446 0.438 B_Naive1 L2
ENSG00000162517 PEF1 -893550 sc-eQTL 5.36e-01 0.0492 0.0793 0.438 B_Naive1 L2
ENSG00000186056 MATN1-AS1 32842 sc-eQTL 5.13e-02 -0.115 0.0586 0.438 B_Naive1 L2
ENSG00000287510 AL137857.1 19653 sc-eQTL 2.03e-02 -0.169 0.0722 0.438 B_Naive1 L2
ENSG00000060688 SNRNP40 -545442 sc-eQTL 7.15e-01 -0.0341 0.0933 0.436 B_Naive2 L2
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 6.32e-01 0.037 0.077 0.436 B_Naive2 L2
ENSG00000134644 PUM1 -314645 sc-eQTL 5.75e-01 -0.0423 0.0754 0.436 B_Naive2 L2
ENSG00000162510 MATN1 27761 sc-eQTL 4.65e-01 0.053 0.0723 0.436 B_Naive2 L2
ENSG00000162511 LAPTM5 -6428 sc-eQTL 7.97e-03 -0.13 0.0483 0.436 B_Naive2 L2
ENSG00000162517 PEF1 -893550 sc-eQTL 3.70e-01 -0.0802 0.0893 0.436 B_Naive2 L2
ENSG00000186056 MATN1-AS1 32842 sc-eQTL 5.19e-01 -0.0462 0.0715 0.436 B_Naive2 L2
ENSG00000287510 AL137857.1 19653 sc-eQTL 5.34e-02 -0.149 0.0766 0.436 B_Naive2 L2
ENSG00000060688 SNRNP40 -545442 sc-eQTL 3.80e-01 0.0821 0.0934 0.434 CD4_CTL L2
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 4.12e-01 -0.0756 0.0919 0.434 CD4_CTL L2
ENSG00000134644 PUM1 -314645 sc-eQTL 9.12e-01 0.00996 0.0903 0.434 CD4_CTL L2
ENSG00000162511 LAPTM5 -6428 sc-eQTL 9.53e-01 -0.00475 0.0805 0.434 CD4_CTL L2
ENSG00000162517 PEF1 -893550 sc-eQTL 8.81e-01 -0.0123 0.0825 0.434 CD4_CTL L2
ENSG00000186056 MATN1-AS1 32842 sc-eQTL 4.48e-01 -0.0669 0.0879 0.434 CD4_CTL L2
ENSG00000287510 AL137857.1 19653 sc-eQTL 2.84e-01 0.0831 0.0774 0.434 CD4_CTL L2
ENSG00000060688 SNRNP40 -545442 sc-eQTL 6.95e-01 -0.0284 0.0723 0.438 CD4_Naive L2
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 2.00e-01 -0.0821 0.0638 0.438 CD4_Naive L2
ENSG00000134644 PUM1 -314645 sc-eQTL 6.17e-01 0.0256 0.0511 0.438 CD4_Naive L2
ENSG00000162511 LAPTM5 -6428 sc-eQTL 9.87e-01 0.000928 0.0548 0.438 CD4_Naive L2
ENSG00000162517 PEF1 -893550 sc-eQTL 5.65e-01 -0.0347 0.0601 0.438 CD4_Naive L2
ENSG00000186056 MATN1-AS1 32842 sc-eQTL 3.59e-01 -0.051 0.0555 0.438 CD4_Naive L2
ENSG00000287510 AL137857.1 19653 sc-eQTL 4.48e-01 -0.0485 0.0638 0.438 CD4_Naive L2
ENSG00000060688 SNRNP40 -545442 sc-eQTL 1.04e-01 -0.147 0.0903 0.438 CD4_TCM L2
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 1.81e-01 -0.098 0.0729 0.438 CD4_TCM L2
ENSG00000134644 PUM1 -314645 sc-eQTL 2.58e-01 0.0734 0.0646 0.438 CD4_TCM L2
ENSG00000162511 LAPTM5 -6428 sc-eQTL 8.27e-01 0.0117 0.0538 0.438 CD4_TCM L2
ENSG00000162517 PEF1 -893550 sc-eQTL 2.04e-01 0.0915 0.0718 0.438 CD4_TCM L2
ENSG00000186056 MATN1-AS1 32842 sc-eQTL 7.37e-02 -0.122 0.0677 0.438 CD4_TCM L2
ENSG00000287510 AL137857.1 19653 sc-eQTL 2.41e-01 -0.0892 0.0758 0.438 CD4_TCM L2
ENSG00000060688 SNRNP40 -545442 sc-eQTL 3.24e-01 0.089 0.0901 0.438 CD4_TEM L2
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 1.18e-01 -0.134 0.0855 0.438 CD4_TEM L2
ENSG00000134644 PUM1 -314645 sc-eQTL 2.44e-01 0.0835 0.0714 0.438 CD4_TEM L2
ENSG00000162511 LAPTM5 -6428 sc-eQTL 8.08e-02 -0.126 0.072 0.438 CD4_TEM L2
ENSG00000162517 PEF1 -893550 sc-eQTL 2.65e-01 -0.0905 0.081 0.438 CD4_TEM L2
ENSG00000186056 MATN1-AS1 32842 sc-eQTL 2.16e-01 -0.105 0.0845 0.438 CD4_TEM L2
ENSG00000287510 AL137857.1 19653 sc-eQTL 9.49e-01 -0.0053 0.0836 0.438 CD4_TEM L2
ENSG00000060688 SNRNP40 -545442 sc-eQTL 9.60e-01 -0.00499 0.0988 0.438 CD8_CTL L2
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 5.06e-01 0.0504 0.0757 0.438 CD8_CTL L2
ENSG00000134644 PUM1 -314645 sc-eQTL 6.22e-01 0.0363 0.0735 0.438 CD8_CTL L2
ENSG00000162511 LAPTM5 -6428 sc-eQTL 4.80e-02 0.161 0.0807 0.438 CD8_CTL L2
ENSG00000162517 PEF1 -893550 sc-eQTL 5.82e-01 -0.0391 0.0709 0.438 CD8_CTL L2
ENSG00000186056 MATN1-AS1 32842 sc-eQTL 5.05e-01 -0.0572 0.0856 0.438 CD8_CTL L2
ENSG00000287510 AL137857.1 19653 sc-eQTL 4.32e-01 0.0633 0.0804 0.438 CD8_CTL L2
ENSG00000060688 SNRNP40 -545442 sc-eQTL 7.95e-01 -0.0235 0.0904 0.438 CD8_Naive L2
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 5.63e-01 0.0451 0.0779 0.438 CD8_Naive L2
ENSG00000134644 PUM1 -314645 sc-eQTL 5.99e-01 -0.033 0.0627 0.438 CD8_Naive L2
ENSG00000162511 LAPTM5 -6428 sc-eQTL 8.73e-01 -0.00959 0.0601 0.438 CD8_Naive L2
ENSG00000162517 PEF1 -893550 sc-eQTL 2.18e-01 -0.103 0.0833 0.438 CD8_Naive L2
ENSG00000186056 MATN1-AS1 32842 sc-eQTL 3.50e-01 0.0701 0.0749 0.438 CD8_Naive L2
ENSG00000287510 AL137857.1 19653 sc-eQTL 5.31e-01 -0.0513 0.0816 0.438 CD8_Naive L2
ENSG00000060688 SNRNP40 -545442 sc-eQTL 6.51e-02 0.185 0.0998 0.431 CD8_TCM L2
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 3.49e-01 -0.0865 0.0921 0.431 CD8_TCM L2
ENSG00000134644 PUM1 -314645 sc-eQTL 6.36e-01 0.0411 0.0867 0.431 CD8_TCM L2
ENSG00000162511 LAPTM5 -6428 sc-eQTL 7.39e-01 0.0302 0.0908 0.431 CD8_TCM L2
ENSG00000162517 PEF1 -893550 sc-eQTL 1.28e-01 -0.141 0.0922 0.431 CD8_TCM L2
ENSG00000186056 MATN1-AS1 32842 sc-eQTL 9.45e-01 0.00578 0.0841 0.431 CD8_TCM L2
ENSG00000287510 AL137857.1 19653 sc-eQTL 4.78e-01 -0.0603 0.0848 0.431 CD8_TCM L2
ENSG00000060688 SNRNP40 -545442 sc-eQTL 2.70e-01 -0.106 0.0956 0.436 CD8_TEM L2
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 2.20e-01 0.113 0.0916 0.436 CD8_TEM L2
ENSG00000134644 PUM1 -314645 sc-eQTL 8.00e-01 0.0238 0.094 0.436 CD8_TEM L2
ENSG00000162511 LAPTM5 -6428 sc-eQTL 2.41e-01 0.104 0.0881 0.436 CD8_TEM L2
ENSG00000162517 PEF1 -893550 sc-eQTL 3.33e-01 -0.0806 0.083 0.436 CD8_TEM L2
ENSG00000186056 MATN1-AS1 32842 sc-eQTL 4.41e-01 -0.0707 0.0916 0.436 CD8_TEM L2
ENSG00000287510 AL137857.1 19653 sc-eQTL 2.41e-04 -0.3 0.0802 0.436 CD8_TEM L2
ENSG00000060688 SNRNP40 -545442 sc-eQTL 9.10e-02 0.165 0.0973 0.439 MAIT L2
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 7.57e-01 -0.0269 0.0867 0.439 MAIT L2
ENSG00000134644 PUM1 -314645 sc-eQTL 7.98e-01 -0.0213 0.0832 0.439 MAIT L2
ENSG00000162511 LAPTM5 -6428 sc-eQTL 9.17e-01 -0.00815 0.0785 0.439 MAIT L2
ENSG00000162517 PEF1 -893550 sc-eQTL 1.15e-01 0.136 0.0857 0.439 MAIT L2
ENSG00000186056 MATN1-AS1 32842 sc-eQTL 5.47e-01 0.0526 0.0873 0.439 MAIT L2
ENSG00000287510 AL137857.1 19653 sc-eQTL 4.44e-01 0.0689 0.0899 0.439 MAIT L2
ENSG00000060688 SNRNP40 -545442 sc-eQTL 5.70e-01 0.0558 0.0981 0.438 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 3.66e-01 -0.0751 0.0828 0.438 NK_CD56bright L2
ENSG00000134644 PUM1 -314645 sc-eQTL 5.81e-01 0.0481 0.0871 0.438 NK_CD56bright L2
ENSG00000162511 LAPTM5 -6428 sc-eQTL 2.15e-01 0.106 0.0856 0.438 NK_CD56bright L2
ENSG00000162517 PEF1 -893550 sc-eQTL 7.07e-01 0.0314 0.0834 0.438 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 32842 sc-eQTL 4.19e-01 -0.0699 0.0862 0.438 NK_CD56bright L2
ENSG00000287510 AL137857.1 19653 sc-eQTL 4.23e-01 -0.0682 0.0849 0.438 NK_CD56bright L2
ENSG00000060688 SNRNP40 -545442 sc-eQTL 7.62e-01 0.0281 0.0928 0.438 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 3.38e-01 -0.0657 0.0685 0.438 NK_CD56dim L2
ENSG00000134644 PUM1 -314645 sc-eQTL 7.48e-01 0.0226 0.0704 0.438 NK_CD56dim L2
ENSG00000162511 LAPTM5 -6428 sc-eQTL 1.22e-01 0.116 0.0746 0.438 NK_CD56dim L2
ENSG00000162517 PEF1 -893550 sc-eQTL 9.44e-01 0.00472 0.0668 0.438 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 32842 sc-eQTL 5.39e-01 0.0578 0.094 0.438 NK_CD56dim L2
ENSG00000287510 AL137857.1 19653 sc-eQTL 2.77e-01 -0.0844 0.0774 0.438 NK_CD56dim L2
ENSG00000060688 SNRNP40 -545442 sc-eQTL 8.41e-01 -0.0199 0.0989 0.443 NK_HLA L2
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 7.83e-01 -0.0244 0.0883 0.443 NK_HLA L2
ENSG00000134644 PUM1 -314645 sc-eQTL 4.93e-01 -0.0591 0.086 0.443 NK_HLA L2
ENSG00000162511 LAPTM5 -6428 sc-eQTL 2.12e-01 0.103 0.0818 0.443 NK_HLA L2
ENSG00000162517 PEF1 -893550 sc-eQTL 9.86e-01 0.00163 0.0926 0.443 NK_HLA L2
ENSG00000186056 MATN1-AS1 32842 sc-eQTL 8.11e-01 -0.0209 0.0874 0.443 NK_HLA L2
ENSG00000287510 AL137857.1 19653 sc-eQTL 7.59e-01 -0.026 0.0845 0.443 NK_HLA L2
ENSG00000060688 SNRNP40 -545442 sc-eQTL 9.26e-01 0.00838 0.0904 0.438 NK_cytokine L2
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 5.04e-01 -0.0472 0.0705 0.438 NK_cytokine L2
ENSG00000134644 PUM1 -314645 sc-eQTL 8.79e-01 0.0116 0.0763 0.438 NK_cytokine L2
ENSG00000162511 LAPTM5 -6428 sc-eQTL 8.26e-01 -0.0185 0.084 0.438 NK_cytokine L2
ENSG00000162517 PEF1 -893550 sc-eQTL 2.79e-01 0.0774 0.0714 0.438 NK_cytokine L2
ENSG00000186056 MATN1-AS1 32842 sc-eQTL 5.32e-01 0.0557 0.0889 0.438 NK_cytokine L2
ENSG00000287510 AL137857.1 19653 sc-eQTL 4.93e-01 -0.0568 0.0827 0.438 NK_cytokine L2
ENSG00000060688 SNRNP40 -545442 sc-eQTL 2.18e-01 -0.143 0.115 0.452 PB L2
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 4.86e-01 -0.0937 0.134 0.452 PB L2
ENSG00000134644 PUM1 -314645 sc-eQTL 5.52e-01 0.0696 0.117 0.452 PB L2
ENSG00000162510 MATN1 27761 sc-eQTL 7.09e-01 0.0408 0.109 0.452 PB L2
ENSG00000162511 LAPTM5 -6428 sc-eQTL 1.66e-01 0.108 0.0772 0.452 PB L2
ENSG00000162517 PEF1 -893550 sc-eQTL 5.40e-01 0.0736 0.12 0.452 PB L2
ENSG00000186056 MATN1-AS1 32842 sc-eQTL 4.85e-01 0.0744 0.106 0.452 PB L2
ENSG00000287510 AL137857.1 19653 sc-eQTL 4.24e-01 0.0907 0.113 0.452 PB L2
ENSG00000060688 SNRNP40 -545442 sc-eQTL 5.26e-01 0.0457 0.0719 0.43 Pro_T L2
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 6.81e-03 -0.245 0.0898 0.43 Pro_T L2
ENSG00000134644 PUM1 -314645 sc-eQTL 3.95e-01 0.0725 0.0851 0.43 Pro_T L2
ENSG00000162511 LAPTM5 -6428 sc-eQTL 6.35e-01 0.0291 0.0611 0.43 Pro_T L2
ENSG00000162517 PEF1 -893550 sc-eQTL 3.69e-01 -0.0806 0.0896 0.43 Pro_T L2
ENSG00000186056 MATN1-AS1 32842 sc-eQTL 7.57e-01 0.0265 0.0855 0.43 Pro_T L2
ENSG00000287510 AL137857.1 19653 sc-eQTL 3.43e-01 -0.0745 0.0784 0.43 Pro_T L2
ENSG00000060688 SNRNP40 -545442 sc-eQTL 5.55e-01 -0.0555 0.094 0.438 Treg L2
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 6.57e-01 0.0405 0.0909 0.438 Treg L2
ENSG00000134644 PUM1 -314645 sc-eQTL 2.83e-01 -0.0782 0.0726 0.438 Treg L2
ENSG00000162511 LAPTM5 -6428 sc-eQTL 2.99e-01 0.0866 0.0832 0.438 Treg L2
ENSG00000162517 PEF1 -893550 sc-eQTL 8.54e-01 -0.0166 0.09 0.438 Treg L2
ENSG00000186056 MATN1-AS1 32842 sc-eQTL 8.79e-02 -0.145 0.0844 0.438 Treg L2
ENSG00000287510 AL137857.1 19653 sc-eQTL 9.51e-01 0.00517 0.0848 0.438 Treg L2
ENSG00000060688 SNRNP40 -545442 sc-eQTL 3.88e-01 -0.0797 0.0921 0.441 cDC L2
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 9.99e-01 -0.000117 0.0999 0.441 cDC L2
ENSG00000134644 PUM1 -314645 sc-eQTL 3.07e-01 -0.0876 0.0856 0.441 cDC L2
ENSG00000162511 LAPTM5 -6428 sc-eQTL 1.97e-01 -0.0776 0.0599 0.441 cDC L2
ENSG00000162517 PEF1 -893550 sc-eQTL 8.61e-01 0.0153 0.0871 0.441 cDC L2
ENSG00000168528 SERINC2 -658219 sc-eQTL 1.68e-01 0.106 0.0768 0.441 cDC L2
ENSG00000284543 LINC01226 -754880 sc-eQTL 5.51e-02 -0.145 0.0751 0.441 cDC L2
ENSG00000287510 AL137857.1 19653 sc-eQTL 1.42e-01 -0.12 0.0812 0.441 cDC L2
ENSG00000060688 SNRNP40 -545442 sc-eQTL 2.54e-01 0.0858 0.0749 0.438 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 9.04e-01 -0.0102 0.0839 0.438 cMono_IL1B L2
ENSG00000134644 PUM1 -314645 sc-eQTL 7.57e-02 -0.101 0.0563 0.438 cMono_IL1B L2
ENSG00000162511 LAPTM5 -6428 sc-eQTL 7.32e-02 -0.089 0.0494 0.438 cMono_IL1B L2
ENSG00000162512 SDC3 -157412 sc-eQTL 5.27e-02 -0.181 0.093 0.438 cMono_IL1B L2
ENSG00000162517 PEF1 -893550 sc-eQTL 2.69e-01 -0.0848 0.0764 0.438 cMono_IL1B L2
ENSG00000168528 SERINC2 -658219 sc-eQTL 7.02e-01 -0.0364 0.0949 0.438 cMono_IL1B L2
ENSG00000284543 LINC01226 -754880 sc-eQTL 2.86e-01 0.0896 0.0837 0.438 cMono_IL1B L2
ENSG00000287510 AL137857.1 19653 sc-eQTL 8.12e-01 -0.0187 0.0783 0.438 cMono_IL1B L2
ENSG00000060688 SNRNP40 -545442 sc-eQTL 2.27e-02 0.179 0.078 0.438 cMono_S100A L2
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 6.92e-01 0.037 0.0933 0.438 cMono_S100A L2
ENSG00000134644 PUM1 -314645 sc-eQTL 2.77e-01 -0.0732 0.0672 0.438 cMono_S100A L2
ENSG00000162511 LAPTM5 -6428 sc-eQTL 1.18e-02 -0.13 0.051 0.438 cMono_S100A L2
ENSG00000162512 SDC3 -157412 sc-eQTL 3.53e-01 -0.0832 0.0893 0.438 cMono_S100A L2
ENSG00000162517 PEF1 -893550 sc-eQTL 5.76e-01 0.0453 0.0808 0.438 cMono_S100A L2
ENSG00000168528 SERINC2 -658219 sc-eQTL 6.33e-01 -0.0452 0.0947 0.438 cMono_S100A L2
ENSG00000284543 LINC01226 -754880 sc-eQTL 1.76e-01 0.104 0.0766 0.438 cMono_S100A L2
ENSG00000287510 AL137857.1 19653 sc-eQTL 5.50e-01 -0.0463 0.0772 0.438 cMono_S100A L2
ENSG00000060688 SNRNP40 -545442 sc-eQTL 3.45e-01 0.108 0.114 0.439 gdT L2
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 1.68e-01 0.135 0.0974 0.439 gdT L2
ENSG00000134644 PUM1 -314645 sc-eQTL 5.39e-01 0.0621 0.101 0.439 gdT L2
ENSG00000162511 LAPTM5 -6428 sc-eQTL 8.79e-01 0.0167 0.11 0.439 gdT L2
ENSG00000162517 PEF1 -893550 sc-eQTL 1.50e-01 -0.144 0.0997 0.439 gdT L2
ENSG00000186056 MATN1-AS1 32842 sc-eQTL 3.94e-01 0.0864 0.101 0.439 gdT L2
ENSG00000287510 AL137857.1 19653 sc-eQTL 3.56e-01 0.0906 0.0979 0.439 gdT L2
ENSG00000060688 SNRNP40 -545442 sc-eQTL 3.03e-01 0.0895 0.0866 0.438 intMono L2
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 7.94e-01 0.0244 0.0934 0.438 intMono L2
ENSG00000134644 PUM1 -314645 sc-eQTL 8.33e-01 0.0167 0.0792 0.438 intMono L2
ENSG00000162511 LAPTM5 -6428 sc-eQTL 6.51e-03 -0.168 0.061 0.438 intMono L2
ENSG00000162512 SDC3 -157412 sc-eQTL 4.84e-01 -0.0596 0.085 0.438 intMono L2
ENSG00000162517 PEF1 -893550 sc-eQTL 4.75e-01 -0.0639 0.0893 0.438 intMono L2
ENSG00000168528 SERINC2 -658219 sc-eQTL 8.19e-01 0.0204 0.0891 0.438 intMono L2
ENSG00000284543 LINC01226 -754880 sc-eQTL 6.50e-01 0.0384 0.0844 0.438 intMono L2
ENSG00000287510 AL137857.1 19653 sc-eQTL 1.31e-01 -0.127 0.084 0.438 intMono L2
ENSG00000060688 SNRNP40 -545442 sc-eQTL 7.69e-01 0.0243 0.0824 0.437 ncMono L2
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 7.80e-01 -0.0246 0.0879 0.437 ncMono L2
ENSG00000134644 PUM1 -314645 sc-eQTL 1.30e-01 -0.109 0.0714 0.437 ncMono L2
ENSG00000162511 LAPTM5 -6428 sc-eQTL 9.33e-01 0.00551 0.0652 0.437 ncMono L2
ENSG00000162512 SDC3 -157412 sc-eQTL 6.00e-01 -0.0383 0.0731 0.437 ncMono L2
ENSG00000162517 PEF1 -893550 sc-eQTL 7.40e-01 -0.0279 0.0838 0.437 ncMono L2
ENSG00000168528 SERINC2 -658219 sc-eQTL 4.12e-01 -0.0655 0.0797 0.437 ncMono L2
ENSG00000284543 LINC01226 -754880 sc-eQTL 4.96e-01 -0.0543 0.0796 0.437 ncMono L2
ENSG00000287510 AL137857.1 19653 sc-eQTL 2.43e-02 -0.185 0.0816 0.437 ncMono L2
ENSG00000060688 SNRNP40 -545442 sc-eQTL 4.10e-01 0.0755 0.0913 0.421 pDC L2
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 6.24e-01 0.0493 0.1 0.421 pDC L2
ENSG00000134644 PUM1 -314645 sc-eQTL 9.61e-01 0.00404 0.0833 0.421 pDC L2
ENSG00000162511 LAPTM5 -6428 sc-eQTL 4.50e-02 0.154 0.0764 0.421 pDC L2
ENSG00000162517 PEF1 -893550 sc-eQTL 9.39e-01 0.00769 0.1 0.421 pDC L2
ENSG00000168528 SERINC2 -658219 sc-eQTL 7.12e-01 0.0348 0.0939 0.421 pDC L2
ENSG00000284543 LINC01226 -754880 sc-eQTL 8.48e-01 -0.014 0.0729 0.421 pDC L2
ENSG00000287510 AL137857.1 19653 sc-eQTL 7.17e-01 -0.0311 0.0857 0.421 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -545442 sc-eQTL 9.50e-02 0.156 0.0929 0.438 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 2.42e-01 -0.091 0.0776 0.438 B_Memory LOneK1K
ENSG00000134644 PUM1 -314645 sc-eQTL 1.71e-01 -0.0943 0.0687 0.438 B_Memory LOneK1K
ENSG00000162510 MATN1 27761 sc-eQTL 9.22e-01 0.00773 0.0786 0.438 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -6428 sc-eQTL 4.46e-02 -0.0989 0.0489 0.438 B_Memory LOneK1K
ENSG00000162517 PEF1 -893550 sc-eQTL 5.56e-02 -0.156 0.0811 0.438 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 32842 sc-eQTL 2.20e-01 -0.08 0.0651 0.438 B_Memory LOneK1K
ENSG00000287510 AL137857.1 19653 sc-eQTL 3.65e-01 -0.0645 0.0711 0.438 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -545442 sc-eQTL 7.35e-01 -0.0288 0.085 0.438 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 2.90e-01 0.0711 0.067 0.438 B_Naive LOneK1K
ENSG00000134644 PUM1 -314645 sc-eQTL 5.33e-01 -0.0397 0.0635 0.438 B_Naive LOneK1K
ENSG00000162510 MATN1 27761 sc-eQTL 3.62e-01 0.0558 0.0611 0.438 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -6428 sc-eQTL 1.72e-02 -0.102 0.0425 0.438 B_Naive LOneK1K
ENSG00000162517 PEF1 -893550 sc-eQTL 9.39e-01 0.00601 0.0787 0.438 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 32842 sc-eQTL 3.04e-02 -0.12 0.0551 0.438 B_Naive LOneK1K
ENSG00000287510 AL137857.1 19653 sc-eQTL 2.11e-02 -0.152 0.0653 0.438 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -545442 sc-eQTL 6.45e-03 0.191 0.0695 0.438 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 5.24e-01 0.0511 0.0801 0.438 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -314645 sc-eQTL 4.17e-02 -0.104 0.0506 0.438 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -6428 sc-eQTL 4.39e-02 -0.0902 0.0445 0.438 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -157412 sc-eQTL 9.48e-02 -0.153 0.0911 0.438 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -893550 sc-eQTL 6.43e-01 -0.0299 0.0644 0.438 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -658219 sc-eQTL 6.40e-01 -0.0442 0.0943 0.438 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -754880 sc-eQTL 1.42e-01 0.113 0.0769 0.438 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 19653 sc-eQTL 4.92e-01 -0.0498 0.0723 0.438 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -545442 sc-eQTL 4.58e-01 0.058 0.078 0.438 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 9.15e-01 -0.00917 0.0855 0.438 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -314645 sc-eQTL 2.02e-01 -0.0893 0.0698 0.438 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -6428 sc-eQTL 1.24e-01 -0.0861 0.0557 0.438 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -157412 sc-eQTL 8.46e-01 -0.0159 0.0818 0.438 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -893550 sc-eQTL 2.52e-01 -0.0852 0.0741 0.438 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -658219 sc-eQTL 8.22e-01 -0.0191 0.0849 0.438 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -754880 sc-eQTL 4.27e-01 0.064 0.0804 0.438 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 19653 sc-eQTL 5.96e-02 -0.151 0.08 0.438 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -545442 sc-eQTL 9.00e-01 -0.011 0.0878 0.438 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -545636 sc-eQTL 5.56e-01 -0.0353 0.0599 0.438 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -314645 sc-eQTL 6.83e-01 -0.0268 0.0657 0.438 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -6428 sc-eQTL 1.90e-01 0.0963 0.0731 0.438 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -893550 sc-eQTL 9.29e-01 0.00501 0.0558 0.438 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 32842 sc-eQTL 7.09e-01 0.0317 0.0847 0.438 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 19653 sc-eQTL 3.86e-01 -0.0633 0.073 0.438 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162511 LAPTM5 -6428 eQTL 2.88e-10 0.0659 0.0103 0.0 0.0 0.414
ENSG00000162512 SDC3 -157412 eQTL 0.0034 -0.076 0.0259 0.0 0.0 0.414
ENSG00000186056 MATN1-AS1 32842 eQTL 1.79e-05 -0.0568 0.0132 0.028 0.0153 0.414

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162511 LAPTM5 -6428 3.36e-05 3.14e-05 6.31e-06 1.55e-05 5.76e-06 1.41e-05 4.44e-05 4.65e-06 3.11e-05 1.56e-05 3.76e-05 1.74e-05 4.7e-05 1.35e-05 6.84e-06 1.84e-05 1.69e-05 2.52e-05 7.62e-06 6.75e-06 1.49e-05 3.3e-05 3.15e-05 9.09e-06 4.33e-05 7.99e-06 1.39e-05 1.28e-05 3.19e-05 2.5e-05 1.98e-05 1.64e-06 2.56e-06 7.05e-06 1.16e-05 5.77e-06 3.09e-06 3.18e-06 4.58e-06 3.3e-06 1.76e-06 3.65e-05 3.5e-06 3.62e-07 2.49e-06 3.81e-06 4.05e-06 1.58e-06 1.5e-06
ENSG00000162512 SDC3 -157412 1.55e-06 2.51e-06 3.38e-07 1.85e-06 4.83e-07 7.82e-07 1.32e-06 4.39e-07 1.61e-06 8.55e-07 1.84e-06 1.28e-06 2.94e-06 1.16e-06 5.48e-07 1.02e-06 1.04e-06 1.27e-06 6.74e-07 1.09e-06 9.48e-07 2.26e-06 1.56e-06 9.6e-07 2.63e-06 1.2e-06 1.17e-06 1.39e-06 1.68e-06 1.61e-06 1.29e-06 4.52e-07 3.85e-07 6.11e-07 9.13e-07 6.2e-07 9.41e-07 4.21e-07 5.97e-07 2.3e-07 3.18e-07 2.41e-06 4.24e-07 1.93e-07 3.69e-07 2.95e-07 8.41e-07 2.64e-07 1.78e-07
ENSG00000186056 MATN1-AS1 32842 1.13e-05 1.48e-05 3.15e-06 1.06e-05 2.91e-06 7.21e-06 2.34e-05 3.72e-06 1.78e-05 9.01e-06 2.1e-05 8.18e-06 2.53e-05 6.13e-06 5.06e-06 9.23e-06 8.2e-06 1.37e-05 4.2e-06 4.45e-06 7.95e-06 1.6e-05 1.59e-05 5.59e-06 2.58e-05 5.42e-06 7.99e-06 7.23e-06 1.81e-05 1.43e-05 1.2e-05 1.44e-06 1.44e-06 4.1e-06 7.8e-06 3.78e-06 1.76e-06 2.71e-06 2.8e-06 1.84e-06 1.67e-06 1.77e-05 2.47e-06 3.66e-07 1.85e-06 2.47e-06 3.43e-06 1.21e-06 1.24e-06