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Genes within 1Mb (chr1:30751153:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -545635 sc-eQTL 7.65e-01 0.0254 0.085 0.382 B L1
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 9.02e-01 -0.00837 0.0681 0.382 B L1
ENSG00000134644 PUM1 -314838 sc-eQTL 3.74e-01 0.0508 0.057 0.382 B L1
ENSG00000162510 MATN1 27568 sc-eQTL 6.33e-01 -0.0287 0.06 0.382 B L1
ENSG00000162511 LAPTM5 -6621 sc-eQTL 5.32e-02 0.0906 0.0466 0.382 B L1
ENSG00000162517 PEF1 -893743 sc-eQTL 8.31e-01 0.0152 0.071 0.382 B L1
ENSG00000186056 MATN1-AS1 32649 sc-eQTL 7.59e-01 0.0169 0.0551 0.382 B L1
ENSG00000287510 AL137857.1 19460 sc-eQTL 6.97e-01 0.0254 0.0652 0.382 B L1
ENSG00000060688 SNRNP40 -545635 sc-eQTL 3.96e-01 0.0624 0.0733 0.382 CD4T L1
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 4.21e-02 0.116 0.0568 0.382 CD4T L1
ENSG00000134644 PUM1 -314838 sc-eQTL 7.78e-01 -0.0144 0.0511 0.382 CD4T L1
ENSG00000162511 LAPTM5 -6621 sc-eQTL 2.44e-01 -0.0659 0.0564 0.382 CD4T L1
ENSG00000162517 PEF1 -893743 sc-eQTL 5.22e-01 -0.038 0.0591 0.382 CD4T L1
ENSG00000186056 MATN1-AS1 32649 sc-eQTL 9.96e-02 0.0832 0.0503 0.382 CD4T L1
ENSG00000287510 AL137857.1 19460 sc-eQTL 5.14e-01 0.0396 0.0606 0.382 CD4T L1
ENSG00000060688 SNRNP40 -545635 sc-eQTL 3.55e-01 -0.0898 0.0968 0.382 CD8T L1
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 5.05e-01 -0.043 0.0645 0.382 CD8T L1
ENSG00000134644 PUM1 -314838 sc-eQTL 4.72e-01 -0.0409 0.0567 0.382 CD8T L1
ENSG00000162511 LAPTM5 -6621 sc-eQTL 2.93e-01 -0.058 0.055 0.382 CD8T L1
ENSG00000162517 PEF1 -893743 sc-eQTL 3.77e-01 0.06 0.0678 0.382 CD8T L1
ENSG00000186056 MATN1-AS1 32649 sc-eQTL 3.80e-01 -0.0568 0.0645 0.382 CD8T L1
ENSG00000287510 AL137857.1 19460 sc-eQTL 4.30e-01 -0.0641 0.0811 0.382 CD8T L1
ENSG00000060688 SNRNP40 -545635 sc-eQTL 8.66e-01 -0.0145 0.0859 0.385 DC L1
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 3.24e-02 -0.217 0.101 0.385 DC L1
ENSG00000134644 PUM1 -314838 sc-eQTL 6.95e-01 0.0313 0.0797 0.385 DC L1
ENSG00000162511 LAPTM5 -6621 sc-eQTL 8.38e-01 -0.0116 0.0569 0.385 DC L1
ENSG00000162517 PEF1 -893743 sc-eQTL 3.20e-01 0.0917 0.0921 0.385 DC L1
ENSG00000168528 SERINC2 -658412 sc-eQTL 9.52e-01 0.00561 0.0939 0.385 DC L1
ENSG00000284543 LINC01226 -755073 sc-eQTL 8.57e-02 0.107 0.0617 0.385 DC L1
ENSG00000287510 AL137857.1 19460 sc-eQTL 2.09e-01 0.113 0.0897 0.385 DC L1
ENSG00000060688 SNRNP40 -545635 sc-eQTL 4.79e-02 -0.129 0.065 0.382 Mono L1
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 8.84e-01 0.0118 0.0813 0.382 Mono L1
ENSG00000134644 PUM1 -314838 sc-eQTL 6.45e-01 0.0241 0.0521 0.382 Mono L1
ENSG00000162511 LAPTM5 -6621 sc-eQTL 1.10e-02 0.121 0.0472 0.382 Mono L1
ENSG00000162512 SDC3 -157605 sc-eQTL 4.14e-01 0.0753 0.092 0.382 Mono L1
ENSG00000162517 PEF1 -893743 sc-eQTL 8.36e-01 -0.0134 0.0647 0.382 Mono L1
ENSG00000168528 SERINC2 -658412 sc-eQTL 9.11e-01 -0.0111 0.0989 0.382 Mono L1
ENSG00000284543 LINC01226 -755073 sc-eQTL 4.61e-01 -0.0642 0.087 0.382 Mono L1
ENSG00000287510 AL137857.1 19460 sc-eQTL 1.11e-01 0.121 0.0757 0.382 Mono L1
ENSG00000060688 SNRNP40 -545635 sc-eQTL 4.27e-01 -0.0727 0.0913 0.382 NK L1
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 9.34e-01 0.00518 0.0626 0.382 NK L1
ENSG00000134644 PUM1 -314838 sc-eQTL 4.86e-01 -0.0458 0.0656 0.382 NK L1
ENSG00000162511 LAPTM5 -6621 sc-eQTL 6.54e-02 0.139 0.075 0.382 NK L1
ENSG00000162517 PEF1 -893743 sc-eQTL 3.38e-01 0.0529 0.0551 0.382 NK L1
ENSG00000186056 MATN1-AS1 32649 sc-eQTL 4.59e-01 -0.0629 0.0848 0.382 NK L1
ENSG00000287510 AL137857.1 19460 sc-eQTL 1.32e-01 0.118 0.078 0.382 NK L1
ENSG00000060688 SNRNP40 -545635 sc-eQTL 9.88e-01 -0.00109 0.0702 0.382 Other_T L1
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 3.15e-01 0.0754 0.0749 0.382 Other_T L1
ENSG00000134644 PUM1 -314838 sc-eQTL 9.35e-01 -0.00548 0.0675 0.382 Other_T L1
ENSG00000162511 LAPTM5 -6621 sc-eQTL 4.07e-01 -0.0459 0.0552 0.382 Other_T L1
ENSG00000162517 PEF1 -893743 sc-eQTL 9.15e-01 -0.0079 0.0739 0.382 Other_T L1
ENSG00000186056 MATN1-AS1 32649 sc-eQTL 7.61e-03 -0.24 0.0891 0.382 Other_T L1
ENSG00000287510 AL137857.1 19460 sc-eQTL 2.77e-01 -0.102 0.0941 0.382 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -545635 sc-eQTL 9.99e-01 0.000131 0.106 0.37 B_Activated L2
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 8.85e-01 -0.0155 0.107 0.37 B_Activated L2
ENSG00000134644 PUM1 -314838 sc-eQTL 6.07e-01 0.0512 0.0993 0.37 B_Activated L2
ENSG00000162510 MATN1 27568 sc-eQTL 5.98e-01 0.0458 0.0868 0.37 B_Activated L2
ENSG00000162511 LAPTM5 -6621 sc-eQTL 7.33e-01 0.0207 0.0605 0.37 B_Activated L2
ENSG00000162517 PEF1 -893743 sc-eQTL 2.73e-01 -0.113 0.103 0.37 B_Activated L2
ENSG00000186056 MATN1-AS1 32649 sc-eQTL 3.19e-01 -0.0974 0.0975 0.37 B_Activated L2
ENSG00000287510 AL137857.1 19460 sc-eQTL 8.07e-01 -0.0212 0.0865 0.37 B_Activated L2
ENSG00000060688 SNRNP40 -545635 sc-eQTL 6.39e-02 -0.19 0.102 0.382 B_Intermediate L2
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 8.00e-01 -0.0217 0.0857 0.382 B_Intermediate L2
ENSG00000134644 PUM1 -314838 sc-eQTL 2.75e-01 0.0883 0.0806 0.382 B_Intermediate L2
ENSG00000162510 MATN1 27568 sc-eQTL 1.75e-01 -0.114 0.0837 0.382 B_Intermediate L2
ENSG00000162511 LAPTM5 -6621 sc-eQTL 4.22e-01 -0.0415 0.0515 0.382 B_Intermediate L2
ENSG00000162517 PEF1 -893743 sc-eQTL 2.79e-02 0.21 0.0948 0.382 B_Intermediate L2
ENSG00000186056 MATN1-AS1 32649 sc-eQTL 5.82e-01 0.0399 0.0724 0.382 B_Intermediate L2
ENSG00000287510 AL137857.1 19460 sc-eQTL 3.97e-01 0.0686 0.0809 0.382 B_Intermediate L2
ENSG00000060688 SNRNP40 -545635 sc-eQTL 6.42e-01 -0.0463 0.0995 0.384 B_Memory L2
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 2.02e-01 0.117 0.0913 0.384 B_Memory L2
ENSG00000134644 PUM1 -314838 sc-eQTL 1.68e-01 -0.11 0.0794 0.384 B_Memory L2
ENSG00000162510 MATN1 27568 sc-eQTL 6.14e-01 0.0385 0.0763 0.384 B_Memory L2
ENSG00000162511 LAPTM5 -6621 sc-eQTL 4.34e-02 0.136 0.067 0.384 B_Memory L2
ENSG00000162517 PEF1 -893743 sc-eQTL 8.04e-01 -0.0225 0.0904 0.384 B_Memory L2
ENSG00000186056 MATN1-AS1 32649 sc-eQTL 5.14e-01 0.0506 0.0774 0.384 B_Memory L2
ENSG00000287510 AL137857.1 19460 sc-eQTL 4.34e-01 0.071 0.0906 0.384 B_Memory L2
ENSG00000060688 SNRNP40 -545635 sc-eQTL 6.28e-01 0.0441 0.091 0.382 B_Naive1 L2
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 5.00e-01 -0.0531 0.0785 0.382 B_Naive1 L2
ENSG00000134644 PUM1 -314838 sc-eQTL 4.70e-01 0.0501 0.0693 0.382 B_Naive1 L2
ENSG00000162510 MATN1 27568 sc-eQTL 8.43e-01 -0.014 0.0704 0.382 B_Naive1 L2
ENSG00000162511 LAPTM5 -6621 sc-eQTL 4.99e-02 0.0918 0.0466 0.382 B_Naive1 L2
ENSG00000162517 PEF1 -893743 sc-eQTL 3.12e-01 -0.0837 0.0827 0.382 B_Naive1 L2
ENSG00000186056 MATN1-AS1 32649 sc-eQTL 5.80e-01 0.0342 0.0617 0.382 B_Naive1 L2
ENSG00000287510 AL137857.1 19460 sc-eQTL 3.62e-01 0.0696 0.0761 0.382 B_Naive1 L2
ENSG00000060688 SNRNP40 -545635 sc-eQTL 5.11e-01 -0.0648 0.0984 0.384 B_Naive2 L2
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 5.30e-01 -0.0511 0.0812 0.384 B_Naive2 L2
ENSG00000134644 PUM1 -314838 sc-eQTL 7.47e-01 0.0257 0.0795 0.384 B_Naive2 L2
ENSG00000162510 MATN1 27568 sc-eQTL 5.09e-01 -0.0505 0.0763 0.384 B_Naive2 L2
ENSG00000162511 LAPTM5 -6621 sc-eQTL 1.76e-01 0.07 0.0516 0.384 B_Naive2 L2
ENSG00000162517 PEF1 -893743 sc-eQTL 3.21e-01 0.0936 0.0941 0.384 B_Naive2 L2
ENSG00000186056 MATN1-AS1 32649 sc-eQTL 1.11e-01 -0.12 0.0751 0.384 B_Naive2 L2
ENSG00000287510 AL137857.1 19460 sc-eQTL 2.06e-01 0.103 0.0813 0.384 B_Naive2 L2
ENSG00000060688 SNRNP40 -545635 sc-eQTL 1.55e-02 -0.237 0.0973 0.382 CD4_CTL L2
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 2.10e-01 0.122 0.0967 0.382 CD4_CTL L2
ENSG00000134644 PUM1 -314838 sc-eQTL 1.40e-01 -0.14 0.0947 0.382 CD4_CTL L2
ENSG00000162511 LAPTM5 -6621 sc-eQTL 1.93e-01 0.11 0.0845 0.382 CD4_CTL L2
ENSG00000162517 PEF1 -893743 sc-eQTL 8.41e-01 0.0175 0.087 0.382 CD4_CTL L2
ENSG00000186056 MATN1-AS1 32649 sc-eQTL 5.48e-01 0.0559 0.0928 0.382 CD4_CTL L2
ENSG00000287510 AL137857.1 19460 sc-eQTL 7.42e-01 -0.027 0.0819 0.382 CD4_CTL L2
ENSG00000060688 SNRNP40 -545635 sc-eQTL 8.25e-01 0.0169 0.0764 0.382 CD4_Naive L2
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 3.83e-02 0.14 0.0671 0.382 CD4_Naive L2
ENSG00000134644 PUM1 -314838 sc-eQTL 5.88e-01 -0.0294 0.0541 0.382 CD4_Naive L2
ENSG00000162511 LAPTM5 -6621 sc-eQTL 8.89e-02 -0.0984 0.0576 0.382 CD4_Naive L2
ENSG00000162517 PEF1 -893743 sc-eQTL 6.38e-01 -0.0299 0.0635 0.382 CD4_Naive L2
ENSG00000186056 MATN1-AS1 32649 sc-eQTL 9.92e-01 0.00058 0.0588 0.382 CD4_Naive L2
ENSG00000287510 AL137857.1 19460 sc-eQTL 3.51e-01 0.063 0.0674 0.382 CD4_Naive L2
ENSG00000060688 SNRNP40 -545635 sc-eQTL 6.92e-02 0.175 0.0961 0.382 CD4_TCM L2
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 2.15e-01 0.0967 0.0778 0.382 CD4_TCM L2
ENSG00000134644 PUM1 -314838 sc-eQTL 9.50e-01 -0.00436 0.0691 0.382 CD4_TCM L2
ENSG00000162511 LAPTM5 -6621 sc-eQTL 7.92e-01 -0.0151 0.0573 0.382 CD4_TCM L2
ENSG00000162517 PEF1 -893743 sc-eQTL 1.35e-01 -0.115 0.0764 0.382 CD4_TCM L2
ENSG00000186056 MATN1-AS1 32649 sc-eQTL 4.89e-02 0.143 0.0721 0.382 CD4_TCM L2
ENSG00000287510 AL137857.1 19460 sc-eQTL 5.31e-01 0.0509 0.0809 0.382 CD4_TCM L2
ENSG00000060688 SNRNP40 -545635 sc-eQTL 4.80e-01 0.0677 0.0958 0.382 CD4_TEM L2
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 3.45e-01 0.0862 0.0912 0.382 CD4_TEM L2
ENSG00000134644 PUM1 -314838 sc-eQTL 8.31e-02 -0.132 0.0756 0.382 CD4_TEM L2
ENSG00000162511 LAPTM5 -6621 sc-eQTL 2.36e-01 0.0913 0.0767 0.382 CD4_TEM L2
ENSG00000162517 PEF1 -893743 sc-eQTL 8.84e-02 0.147 0.0857 0.382 CD4_TEM L2
ENSG00000186056 MATN1-AS1 32649 sc-eQTL 8.57e-02 0.154 0.0895 0.382 CD4_TEM L2
ENSG00000287510 AL137857.1 19460 sc-eQTL 7.58e-02 0.157 0.0881 0.382 CD4_TEM L2
ENSG00000060688 SNRNP40 -545635 sc-eQTL 8.30e-01 -0.0222 0.103 0.382 CD8_CTL L2
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 5.32e-01 -0.0495 0.079 0.382 CD8_CTL L2
ENSG00000134644 PUM1 -314838 sc-eQTL 7.44e-01 -0.0251 0.0768 0.382 CD8_CTL L2
ENSG00000162511 LAPTM5 -6621 sc-eQTL 7.07e-01 -0.032 0.085 0.382 CD8_CTL L2
ENSG00000162517 PEF1 -893743 sc-eQTL 8.03e-01 0.0185 0.0741 0.382 CD8_CTL L2
ENSG00000186056 MATN1-AS1 32649 sc-eQTL 8.55e-01 0.0164 0.0894 0.382 CD8_CTL L2
ENSG00000287510 AL137857.1 19460 sc-eQTL 7.87e-01 -0.0228 0.0841 0.382 CD8_CTL L2
ENSG00000060688 SNRNP40 -545635 sc-eQTL 4.93e-01 -0.0651 0.0947 0.382 CD8_Naive L2
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 2.59e-01 -0.0922 0.0815 0.382 CD8_Naive L2
ENSG00000134644 PUM1 -314838 sc-eQTL 5.47e-01 -0.0396 0.0657 0.382 CD8_Naive L2
ENSG00000162511 LAPTM5 -6621 sc-eQTL 1.42e-01 -0.0925 0.0627 0.382 CD8_Naive L2
ENSG00000162517 PEF1 -893743 sc-eQTL 4.00e-01 0.0739 0.0875 0.382 CD8_Naive L2
ENSG00000186056 MATN1-AS1 32649 sc-eQTL 7.56e-02 -0.139 0.0781 0.382 CD8_Naive L2
ENSG00000287510 AL137857.1 19460 sc-eQTL 9.04e-01 -0.0104 0.0857 0.382 CD8_Naive L2
ENSG00000060688 SNRNP40 -545635 sc-eQTL 1.42e-02 -0.258 0.104 0.389 CD8_TCM L2
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 9.57e-01 -0.00519 0.097 0.389 CD8_TCM L2
ENSG00000134644 PUM1 -314838 sc-eQTL 3.48e-01 0.0856 0.091 0.389 CD8_TCM L2
ENSG00000162511 LAPTM5 -6621 sc-eQTL 6.30e-01 -0.046 0.0954 0.389 CD8_TCM L2
ENSG00000162517 PEF1 -893743 sc-eQTL 3.91e-01 0.0836 0.0973 0.389 CD8_TCM L2
ENSG00000186056 MATN1-AS1 32649 sc-eQTL 7.50e-01 0.0281 0.0883 0.389 CD8_TCM L2
ENSG00000287510 AL137857.1 19460 sc-eQTL 1.57e-01 0.126 0.0888 0.389 CD8_TCM L2
ENSG00000060688 SNRNP40 -545635 sc-eQTL 4.17e-01 0.0813 0.0999 0.381 CD8_TEM L2
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 4.40e-01 -0.0741 0.0958 0.381 CD8_TEM L2
ENSG00000134644 PUM1 -314838 sc-eQTL 9.10e-01 -0.0111 0.0981 0.381 CD8_TEM L2
ENSG00000162511 LAPTM5 -6621 sc-eQTL 1.12e-01 -0.146 0.0916 0.381 CD8_TEM L2
ENSG00000162517 PEF1 -893743 sc-eQTL 1.03e-01 0.141 0.0862 0.381 CD8_TEM L2
ENSG00000186056 MATN1-AS1 32649 sc-eQTL 4.66e-01 -0.0698 0.0956 0.381 CD8_TEM L2
ENSG00000287510 AL137857.1 19460 sc-eQTL 3.69e-02 0.18 0.0857 0.381 CD8_TEM L2
ENSG00000060688 SNRNP40 -545635 sc-eQTL 5.36e-01 -0.0635 0.102 0.379 MAIT L2
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 3.32e-01 0.0881 0.0906 0.379 MAIT L2
ENSG00000134644 PUM1 -314838 sc-eQTL 8.13e-01 0.0206 0.0871 0.379 MAIT L2
ENSG00000162511 LAPTM5 -6621 sc-eQTL 4.71e-01 -0.0592 0.082 0.379 MAIT L2
ENSG00000162517 PEF1 -893743 sc-eQTL 4.94e-01 -0.0618 0.0902 0.379 MAIT L2
ENSG00000186056 MATN1-AS1 32649 sc-eQTL 8.71e-02 -0.156 0.0909 0.379 MAIT L2
ENSG00000287510 AL137857.1 19460 sc-eQTL 8.10e-01 -0.0226 0.0943 0.379 MAIT L2
ENSG00000060688 SNRNP40 -545635 sc-eQTL 6.89e-01 -0.041 0.102 0.382 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 6.63e-01 -0.0377 0.0865 0.382 NK_CD56bright L2
ENSG00000134644 PUM1 -314838 sc-eQTL 7.21e-01 -0.0325 0.0908 0.382 NK_CD56bright L2
ENSG00000162511 LAPTM5 -6621 sc-eQTL 2.24e-01 0.109 0.0893 0.382 NK_CD56bright L2
ENSG00000162517 PEF1 -893743 sc-eQTL 9.50e-01 0.00542 0.087 0.382 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 32649 sc-eQTL 8.76e-01 0.0141 0.09 0.382 NK_CD56bright L2
ENSG00000287510 AL137857.1 19460 sc-eQTL 4.56e-01 0.0661 0.0886 0.382 NK_CD56bright L2
ENSG00000060688 SNRNP40 -545635 sc-eQTL 8.05e-01 -0.0239 0.0968 0.381 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 3.17e-01 0.0716 0.0714 0.381 NK_CD56dim L2
ENSG00000134644 PUM1 -314838 sc-eQTL 3.76e-01 -0.0651 0.0733 0.381 NK_CD56dim L2
ENSG00000162511 LAPTM5 -6621 sc-eQTL 2.47e-01 0.0907 0.0781 0.381 NK_CD56dim L2
ENSG00000162517 PEF1 -893743 sc-eQTL 8.28e-01 -0.0151 0.0697 0.381 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 32649 sc-eQTL 3.01e-01 -0.102 0.0979 0.381 NK_CD56dim L2
ENSG00000287510 AL137857.1 19460 sc-eQTL 1.43e-01 0.118 0.0805 0.381 NK_CD56dim L2
ENSG00000060688 SNRNP40 -545635 sc-eQTL 1.06e-01 -0.171 0.105 0.377 NK_HLA L2
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 5.53e-01 0.0561 0.0944 0.377 NK_HLA L2
ENSG00000134644 PUM1 -314838 sc-eQTL 1.31e-01 0.139 0.0915 0.377 NK_HLA L2
ENSG00000162511 LAPTM5 -6621 sc-eQTL 6.66e-01 0.038 0.0878 0.377 NK_HLA L2
ENSG00000162517 PEF1 -893743 sc-eQTL 7.89e-01 -0.0266 0.099 0.377 NK_HLA L2
ENSG00000186056 MATN1-AS1 32649 sc-eQTL 3.52e-01 0.087 0.0933 0.377 NK_HLA L2
ENSG00000287510 AL137857.1 19460 sc-eQTL 6.57e-01 -0.0402 0.0904 0.377 NK_HLA L2
ENSG00000060688 SNRNP40 -545635 sc-eQTL 2.79e-01 -0.102 0.0939 0.381 NK_cytokine L2
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 8.60e-01 -0.0129 0.0735 0.381 NK_cytokine L2
ENSG00000134644 PUM1 -314838 sc-eQTL 3.38e-01 -0.0761 0.0793 0.381 NK_cytokine L2
ENSG00000162511 LAPTM5 -6621 sc-eQTL 5.91e-03 0.239 0.0859 0.381 NK_cytokine L2
ENSG00000162517 PEF1 -893743 sc-eQTL 5.68e-01 0.0426 0.0745 0.381 NK_cytokine L2
ENSG00000186056 MATN1-AS1 32649 sc-eQTL 3.62e-01 -0.0844 0.0925 0.381 NK_cytokine L2
ENSG00000287510 AL137857.1 19460 sc-eQTL 5.13e-01 0.0565 0.0861 0.381 NK_cytokine L2
ENSG00000060688 SNRNP40 -545635 sc-eQTL 7.50e-01 0.038 0.119 0.367 PB L2
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 8.87e-01 0.0197 0.138 0.367 PB L2
ENSG00000134644 PUM1 -314838 sc-eQTL 8.62e-01 0.0208 0.12 0.367 PB L2
ENSG00000162510 MATN1 27568 sc-eQTL 7.41e-01 -0.037 0.112 0.367 PB L2
ENSG00000162511 LAPTM5 -6621 sc-eQTL 8.05e-01 -0.0198 0.0799 0.367 PB L2
ENSG00000162517 PEF1 -893743 sc-eQTL 9.97e-01 0.00041 0.123 0.367 PB L2
ENSG00000186056 MATN1-AS1 32649 sc-eQTL 3.22e-01 -0.108 0.109 0.367 PB L2
ENSG00000287510 AL137857.1 19460 sc-eQTL 5.38e-01 -0.0718 0.116 0.367 PB L2
ENSG00000060688 SNRNP40 -545635 sc-eQTL 5.36e-01 -0.0464 0.0748 0.387 Pro_T L2
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 1.89e-02 0.222 0.0938 0.387 Pro_T L2
ENSG00000134644 PUM1 -314838 sc-eQTL 3.15e-01 -0.0891 0.0884 0.387 Pro_T L2
ENSG00000162511 LAPTM5 -6621 sc-eQTL 6.22e-01 -0.0314 0.0635 0.387 Pro_T L2
ENSG00000162517 PEF1 -893743 sc-eQTL 7.27e-01 0.0326 0.0933 0.387 Pro_T L2
ENSG00000186056 MATN1-AS1 32649 sc-eQTL 8.18e-01 0.0204 0.0888 0.387 Pro_T L2
ENSG00000287510 AL137857.1 19460 sc-eQTL 8.73e-01 -0.0131 0.0817 0.387 Pro_T L2
ENSG00000060688 SNRNP40 -545635 sc-eQTL 3.09e-01 -0.1 0.0982 0.382 Treg L2
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 6.70e-01 -0.0405 0.0952 0.382 Treg L2
ENSG00000134644 PUM1 -314838 sc-eQTL 2.27e-01 0.0919 0.0759 0.382 Treg L2
ENSG00000162511 LAPTM5 -6621 sc-eQTL 4.73e-01 -0.0627 0.0871 0.382 Treg L2
ENSG00000162517 PEF1 -893743 sc-eQTL 8.99e-01 0.012 0.0942 0.382 Treg L2
ENSG00000186056 MATN1-AS1 32649 sc-eQTL 1.47e-02 0.216 0.0876 0.382 Treg L2
ENSG00000287510 AL137857.1 19460 sc-eQTL 7.76e-01 -0.0253 0.0888 0.382 Treg L2
ENSG00000060688 SNRNP40 -545635 sc-eQTL 7.62e-01 0.0306 0.101 0.385 cDC L2
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 1.90e-01 -0.143 0.109 0.385 cDC L2
ENSG00000134644 PUM1 -314838 sc-eQTL 5.96e-01 0.0498 0.0938 0.385 cDC L2
ENSG00000162511 LAPTM5 -6621 sc-eQTL 5.10e-01 0.0434 0.0657 0.385 cDC L2
ENSG00000162517 PEF1 -893743 sc-eQTL 7.21e-01 0.0341 0.0952 0.385 cDC L2
ENSG00000168528 SERINC2 -658412 sc-eQTL 3.20e-01 -0.084 0.0842 0.385 cDC L2
ENSG00000284543 LINC01226 -755073 sc-eQTL 6.17e-01 0.0415 0.0829 0.385 cDC L2
ENSG00000287510 AL137857.1 19460 sc-eQTL 1.28e-01 0.136 0.0888 0.385 cDC L2
ENSG00000060688 SNRNP40 -545635 sc-eQTL 7.14e-01 -0.0294 0.0799 0.382 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 3.62e-01 0.0813 0.0889 0.382 cMono_IL1B L2
ENSG00000134644 PUM1 -314838 sc-eQTL 4.26e-01 0.048 0.0602 0.382 cMono_IL1B L2
ENSG00000162511 LAPTM5 -6621 sc-eQTL 3.40e-02 0.112 0.0524 0.382 cMono_IL1B L2
ENSG00000162512 SDC3 -157605 sc-eQTL 3.30e-01 0.0972 0.0995 0.382 cMono_IL1B L2
ENSG00000162517 PEF1 -893743 sc-eQTL 1.75e-01 0.11 0.0811 0.382 cMono_IL1B L2
ENSG00000168528 SERINC2 -658412 sc-eQTL 7.62e-01 -0.0306 0.101 0.382 cMono_IL1B L2
ENSG00000284543 LINC01226 -755073 sc-eQTL 9.64e-01 -0.004 0.0892 0.382 cMono_IL1B L2
ENSG00000287510 AL137857.1 19460 sc-eQTL 5.97e-01 0.044 0.0832 0.382 cMono_IL1B L2
ENSG00000060688 SNRNP40 -545635 sc-eQTL 4.41e-02 -0.168 0.0831 0.382 cMono_S100A L2
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 7.85e-01 0.027 0.0992 0.382 cMono_S100A L2
ENSG00000134644 PUM1 -314838 sc-eQTL 7.25e-01 -0.0252 0.0717 0.382 cMono_S100A L2
ENSG00000162511 LAPTM5 -6621 sc-eQTL 5.18e-02 0.107 0.0546 0.382 cMono_S100A L2
ENSG00000162512 SDC3 -157605 sc-eQTL 2.97e-01 0.0992 0.0949 0.382 cMono_S100A L2
ENSG00000162517 PEF1 -893743 sc-eQTL 1.63e-01 -0.12 0.0855 0.382 cMono_S100A L2
ENSG00000168528 SERINC2 -658412 sc-eQTL 6.32e-01 -0.0484 0.101 0.382 cMono_S100A L2
ENSG00000284543 LINC01226 -755073 sc-eQTL 1.51e-01 -0.117 0.0815 0.382 cMono_S100A L2
ENSG00000287510 AL137857.1 19460 sc-eQTL 5.56e-01 0.0484 0.0821 0.382 cMono_S100A L2
ENSG00000060688 SNRNP40 -545635 sc-eQTL 6.00e-01 -0.0663 0.126 0.373 gdT L2
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 5.28e-01 0.0686 0.108 0.373 gdT L2
ENSG00000134644 PUM1 -314838 sc-eQTL 2.68e-01 -0.124 0.111 0.373 gdT L2
ENSG00000162511 LAPTM5 -6621 sc-eQTL 8.28e-01 0.0266 0.122 0.373 gdT L2
ENSG00000162517 PEF1 -893743 sc-eQTL 5.22e-01 0.0714 0.111 0.373 gdT L2
ENSG00000186056 MATN1-AS1 32649 sc-eQTL 2.73e-01 -0.123 0.112 0.373 gdT L2
ENSG00000287510 AL137857.1 19460 sc-eQTL 4.18e-01 -0.0882 0.109 0.373 gdT L2
ENSG00000060688 SNRNP40 -545635 sc-eQTL 2.47e-01 -0.108 0.0933 0.387 intMono L2
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 5.33e-01 -0.0628 0.101 0.387 intMono L2
ENSG00000134644 PUM1 -314838 sc-eQTL 8.11e-01 0.0205 0.0854 0.387 intMono L2
ENSG00000162511 LAPTM5 -6621 sc-eQTL 5.55e-03 0.184 0.0657 0.387 intMono L2
ENSG00000162512 SDC3 -157605 sc-eQTL 9.52e-01 0.00554 0.0918 0.387 intMono L2
ENSG00000162517 PEF1 -893743 sc-eQTL 1.97e-01 0.124 0.096 0.387 intMono L2
ENSG00000168528 SERINC2 -658412 sc-eQTL 4.29e-01 -0.076 0.0959 0.387 intMono L2
ENSG00000284543 LINC01226 -755073 sc-eQTL 2.95e-01 -0.0953 0.0908 0.387 intMono L2
ENSG00000287510 AL137857.1 19460 sc-eQTL 3.38e-01 0.0873 0.0908 0.387 intMono L2
ENSG00000060688 SNRNP40 -545635 sc-eQTL 5.54e-01 -0.0518 0.0875 0.38 ncMono L2
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 9.37e-01 -0.00735 0.0933 0.38 ncMono L2
ENSG00000134644 PUM1 -314838 sc-eQTL 9.31e-01 -0.00657 0.0763 0.38 ncMono L2
ENSG00000162511 LAPTM5 -6621 sc-eQTL 5.20e-02 0.134 0.0686 0.38 ncMono L2
ENSG00000162512 SDC3 -157605 sc-eQTL 4.18e-01 0.0629 0.0775 0.38 ncMono L2
ENSG00000162517 PEF1 -893743 sc-eQTL 3.43e-01 -0.0845 0.0889 0.38 ncMono L2
ENSG00000168528 SERINC2 -658412 sc-eQTL 5.35e-01 0.0526 0.0847 0.38 ncMono L2
ENSG00000284543 LINC01226 -755073 sc-eQTL 7.06e-01 0.032 0.0846 0.38 ncMono L2
ENSG00000287510 AL137857.1 19460 sc-eQTL 3.70e-02 0.182 0.0868 0.38 ncMono L2
ENSG00000060688 SNRNP40 -545635 sc-eQTL 4.54e-01 -0.0733 0.0977 0.393 pDC L2
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 4.82e-01 -0.0756 0.107 0.393 pDC L2
ENSG00000134644 PUM1 -314838 sc-eQTL 3.60e-01 -0.0816 0.0888 0.393 pDC L2
ENSG00000162511 LAPTM5 -6621 sc-eQTL 7.07e-01 -0.0312 0.0828 0.393 pDC L2
ENSG00000162517 PEF1 -893743 sc-eQTL 8.48e-01 0.0206 0.107 0.393 pDC L2
ENSG00000168528 SERINC2 -658412 sc-eQTL 6.30e-01 0.0485 0.1 0.393 pDC L2
ENSG00000284543 LINC01226 -755073 sc-eQTL 9.79e-01 -0.00207 0.0779 0.393 pDC L2
ENSG00000287510 AL137857.1 19460 sc-eQTL 8.19e-01 -0.021 0.0917 0.393 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -545635 sc-eQTL 5.05e-02 -0.191 0.097 0.382 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 3.67e-01 0.0736 0.0813 0.382 B_Memory LOneK1K
ENSG00000134644 PUM1 -314838 sc-eQTL 5.79e-01 -0.0401 0.0721 0.382 B_Memory LOneK1K
ENSG00000162510 MATN1 27568 sc-eQTL 5.73e-01 -0.0464 0.0822 0.382 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -6621 sc-eQTL 7.57e-01 0.016 0.0517 0.382 B_Memory LOneK1K
ENSG00000162517 PEF1 -893743 sc-eQTL 1.61e-01 0.12 0.0853 0.382 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 32649 sc-eQTL 7.03e-01 0.0261 0.0684 0.382 B_Memory LOneK1K
ENSG00000287510 AL137857.1 19460 sc-eQTL 9.99e-01 0.000105 0.0745 0.382 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -545635 sc-eQTL 8.23e-01 0.02 0.0892 0.382 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 4.34e-01 -0.0553 0.0704 0.382 B_Naive LOneK1K
ENSG00000134644 PUM1 -314838 sc-eQTL 6.45e-01 0.0307 0.0667 0.382 B_Naive LOneK1K
ENSG00000162510 MATN1 27568 sc-eQTL 6.46e-01 -0.0296 0.0642 0.382 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -6621 sc-eQTL 8.09e-02 0.0788 0.0449 0.382 B_Naive LOneK1K
ENSG00000162517 PEF1 -893743 sc-eQTL 8.36e-01 -0.0171 0.0826 0.382 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 32649 sc-eQTL 9.72e-01 0.00208 0.0584 0.382 B_Naive LOneK1K
ENSG00000287510 AL137857.1 19460 sc-eQTL 3.40e-01 0.0662 0.0692 0.382 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -545635 sc-eQTL 5.30e-02 -0.145 0.0745 0.382 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 6.38e-01 0.04 0.0851 0.382 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -314838 sc-eQTL 5.41e-01 0.0332 0.0542 0.382 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -6621 sc-eQTL 2.44e-02 0.107 0.0471 0.382 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -157605 sc-eQTL 4.53e-01 0.0732 0.0972 0.382 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -893743 sc-eQTL 8.54e-01 0.0126 0.0684 0.382 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -658412 sc-eQTL 7.63e-01 -0.0302 0.1 0.382 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -755073 sc-eQTL 6.50e-01 -0.0373 0.0821 0.382 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 19460 sc-eQTL 3.41e-01 0.0732 0.0767 0.382 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -545635 sc-eQTL 5.77e-01 -0.0469 0.0839 0.381 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 9.27e-01 -0.00843 0.0918 0.381 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -314838 sc-eQTL 4.58e-01 0.0559 0.0751 0.381 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -6621 sc-eQTL 7.40e-03 0.16 0.0592 0.381 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -157605 sc-eQTL 5.52e-01 0.0524 0.0878 0.381 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -893743 sc-eQTL 5.19e-01 0.0515 0.0798 0.381 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -658412 sc-eQTL 8.62e-01 0.0159 0.0912 0.381 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -755073 sc-eQTL 3.33e-01 -0.0838 0.0863 0.381 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 19460 sc-eQTL 1.01e-01 0.142 0.0861 0.381 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -545635 sc-eQTL 3.39e-01 -0.0883 0.0922 0.381 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -545829 sc-eQTL 8.61e-01 0.0111 0.0631 0.381 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -314838 sc-eQTL 8.92e-01 -0.00938 0.0692 0.381 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -6621 sc-eQTL 6.68e-02 0.141 0.0767 0.381 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -893743 sc-eQTL 4.03e-01 0.0492 0.0586 0.381 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 32649 sc-eQTL 5.76e-01 -0.0499 0.0891 0.381 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 19460 sc-eQTL 2.09e-01 0.0967 0.0767 0.381 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000168528 SERINC2 -658412 eQTL 0.0217 -0.0968 0.0421 0.0 0.0 0.387

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina