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Genes within 1Mb (chr1:30749644:A:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -547144 sc-eQTL 9.67e-01 -0.00341 0.0824 0.397 B L1
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 7.23e-01 -0.0234 0.066 0.397 B L1
ENSG00000134644 PUM1 -316347 sc-eQTL 9.76e-01 0.00164 0.0554 0.397 B L1
ENSG00000162510 MATN1 26059 sc-eQTL 1.35e-02 0.143 0.0574 0.397 B L1
ENSG00000162511 LAPTM5 -8130 sc-eQTL 5.63e-01 -0.0264 0.0456 0.397 B L1
ENSG00000162517 PEF1 -895252 sc-eQTL 3.90e-01 0.0592 0.0687 0.397 B L1
ENSG00000186056 MATN1-AS1 31140 sc-eQTL 8.64e-01 -0.00917 0.0534 0.397 B L1
ENSG00000287510 AL137857.1 17951 sc-eQTL 3.86e-01 -0.0549 0.0631 0.397 B L1
ENSG00000060688 SNRNP40 -547144 sc-eQTL 9.65e-01 0.00317 0.0717 0.397 CD4T L1
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 3.20e-01 -0.0557 0.0559 0.397 CD4T L1
ENSG00000134644 PUM1 -316347 sc-eQTL 6.44e-01 -0.0231 0.0498 0.397 CD4T L1
ENSG00000162511 LAPTM5 -8130 sc-eQTL 4.25e-01 -0.0441 0.0552 0.397 CD4T L1
ENSG00000162517 PEF1 -895252 sc-eQTL 9.72e-01 0.00203 0.0578 0.397 CD4T L1
ENSG00000186056 MATN1-AS1 31140 sc-eQTL 5.77e-01 0.0276 0.0494 0.397 CD4T L1
ENSG00000287510 AL137857.1 17951 sc-eQTL 4.56e-01 -0.0441 0.0591 0.397 CD4T L1
ENSG00000060688 SNRNP40 -547144 sc-eQTL 2.46e-01 0.109 0.0934 0.397 CD8T L1
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 1.61e-01 -0.0873 0.062 0.397 CD8T L1
ENSG00000134644 PUM1 -316347 sc-eQTL 4.13e-01 -0.045 0.0548 0.397 CD8T L1
ENSG00000162511 LAPTM5 -8130 sc-eQTL 4.75e-01 -0.0381 0.0532 0.397 CD8T L1
ENSG00000162517 PEF1 -895252 sc-eQTL 5.55e-01 0.0388 0.0656 0.397 CD8T L1
ENSG00000186056 MATN1-AS1 31140 sc-eQTL 2.38e-01 0.0736 0.0623 0.397 CD8T L1
ENSG00000287510 AL137857.1 17951 sc-eQTL 8.28e-01 -0.0171 0.0785 0.397 CD8T L1
ENSG00000060688 SNRNP40 -547144 sc-eQTL 3.24e-01 0.0814 0.0824 0.394 DC L1
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 9.86e-02 -0.161 0.0972 0.394 DC L1
ENSG00000134644 PUM1 -316347 sc-eQTL 4.42e-01 0.059 0.0765 0.394 DC L1
ENSG00000162511 LAPTM5 -8130 sc-eQTL 9.41e-01 -0.00408 0.0547 0.394 DC L1
ENSG00000162517 PEF1 -895252 sc-eQTL 3.69e-01 0.0797 0.0885 0.394 DC L1
ENSG00000168528 SERINC2 -659921 sc-eQTL 2.22e-01 -0.11 0.0899 0.394 DC L1
ENSG00000284543 LINC01226 -756582 sc-eQTL 7.71e-01 -0.0174 0.0598 0.394 DC L1
ENSG00000287510 AL137857.1 17951 sc-eQTL 5.71e-01 -0.049 0.0865 0.394 DC L1
ENSG00000060688 SNRNP40 -547144 sc-eQTL 6.96e-01 -0.0253 0.0647 0.397 Mono L1
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 4.49e-01 -0.0608 0.0801 0.397 Mono L1
ENSG00000134644 PUM1 -316347 sc-eQTL 7.53e-01 -0.0162 0.0514 0.397 Mono L1
ENSG00000162511 LAPTM5 -8130 sc-eQTL 3.13e-01 0.0477 0.0472 0.397 Mono L1
ENSG00000162512 SDC3 -159114 sc-eQTL 8.44e-01 0.0179 0.0909 0.397 Mono L1
ENSG00000162517 PEF1 -895252 sc-eQTL 3.38e-01 0.061 0.0636 0.397 Mono L1
ENSG00000168528 SERINC2 -659921 sc-eQTL 6.86e-03 -0.262 0.0958 0.397 Mono L1
ENSG00000284543 LINC01226 -756582 sc-eQTL 6.68e-01 -0.0369 0.0858 0.397 Mono L1
ENSG00000287510 AL137857.1 17951 sc-eQTL 6.92e-01 0.0298 0.075 0.397 Mono L1
ENSG00000060688 SNRNP40 -547144 sc-eQTL 2.31e-01 -0.11 0.0913 0.399 NK L1
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 4.29e-01 -0.0496 0.0626 0.399 NK L1
ENSG00000134644 PUM1 -316347 sc-eQTL 7.58e-01 0.0203 0.0658 0.399 NK L1
ENSG00000162511 LAPTM5 -8130 sc-eQTL 1.95e-01 -0.098 0.0754 0.399 NK L1
ENSG00000162517 PEF1 -895252 sc-eQTL 8.68e-01 -0.00922 0.0553 0.399 NK L1
ENSG00000186056 MATN1-AS1 31140 sc-eQTL 7.33e-01 -0.029 0.085 0.399 NK L1
ENSG00000287510 AL137857.1 17951 sc-eQTL 4.83e-01 0.0551 0.0785 0.399 NK L1
ENSG00000060688 SNRNP40 -547144 sc-eQTL 7.75e-01 -0.0195 0.0681 0.397 Other_T L1
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 2.44e-01 -0.0848 0.0726 0.397 Other_T L1
ENSG00000134644 PUM1 -316347 sc-eQTL 9.63e-02 0.109 0.0651 0.397 Other_T L1
ENSG00000162511 LAPTM5 -8130 sc-eQTL 5.04e-01 -0.0359 0.0536 0.397 Other_T L1
ENSG00000162517 PEF1 -895252 sc-eQTL 7.05e-01 -0.0271 0.0716 0.397 Other_T L1
ENSG00000186056 MATN1-AS1 31140 sc-eQTL 2.63e-01 -0.0984 0.0876 0.397 Other_T L1
ENSG00000287510 AL137857.1 17951 sc-eQTL 2.49e-01 0.105 0.0913 0.397 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -547144 sc-eQTL 6.82e-01 -0.0463 0.113 0.401 B_Activated L2
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 5.28e-01 -0.072 0.114 0.401 B_Activated L2
ENSG00000134644 PUM1 -316347 sc-eQTL 8.95e-01 0.014 0.106 0.401 B_Activated L2
ENSG00000162510 MATN1 26059 sc-eQTL 6.65e-01 -0.0401 0.0925 0.401 B_Activated L2
ENSG00000162511 LAPTM5 -8130 sc-eQTL 7.12e-01 0.0239 0.0645 0.401 B_Activated L2
ENSG00000162517 PEF1 -895252 sc-eQTL 3.08e-01 0.112 0.11 0.401 B_Activated L2
ENSG00000186056 MATN1-AS1 31140 sc-eQTL 3.68e-01 -0.0939 0.104 0.401 B_Activated L2
ENSG00000287510 AL137857.1 17951 sc-eQTL 8.36e-01 0.0191 0.0922 0.401 B_Activated L2
ENSG00000060688 SNRNP40 -547144 sc-eQTL 9.95e-02 0.167 0.101 0.397 B_Intermediate L2
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 5.16e-01 -0.0549 0.0843 0.397 B_Intermediate L2
ENSG00000134644 PUM1 -316347 sc-eQTL 7.50e-01 -0.0255 0.0796 0.397 B_Intermediate L2
ENSG00000162510 MATN1 26059 sc-eQTL 8.23e-02 0.144 0.0823 0.397 B_Intermediate L2
ENSG00000162511 LAPTM5 -8130 sc-eQTL 1.74e-01 -0.0691 0.0507 0.397 B_Intermediate L2
ENSG00000162517 PEF1 -895252 sc-eQTL 7.69e-01 0.0277 0.0944 0.397 B_Intermediate L2
ENSG00000186056 MATN1-AS1 31140 sc-eQTL 2.63e-02 -0.158 0.0706 0.397 B_Intermediate L2
ENSG00000287510 AL137857.1 17951 sc-eQTL 7.50e-01 -0.0255 0.0799 0.397 B_Intermediate L2
ENSG00000060688 SNRNP40 -547144 sc-eQTL 3.76e-01 -0.0861 0.0971 0.397 B_Memory L2
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 3.68e-01 -0.0807 0.0895 0.397 B_Memory L2
ENSG00000134644 PUM1 -316347 sc-eQTL 2.39e-01 0.0919 0.0778 0.397 B_Memory L2
ENSG00000162510 MATN1 26059 sc-eQTL 5.14e-01 0.0488 0.0746 0.397 B_Memory L2
ENSG00000162511 LAPTM5 -8130 sc-eQTL 1.40e-01 -0.0974 0.0658 0.397 B_Memory L2
ENSG00000162517 PEF1 -895252 sc-eQTL 8.17e-01 -0.0205 0.0883 0.397 B_Memory L2
ENSG00000186056 MATN1-AS1 31140 sc-eQTL 1.00e+00 -1.93e-05 0.0757 0.397 B_Memory L2
ENSG00000287510 AL137857.1 17951 sc-eQTL 6.54e-01 0.0398 0.0886 0.397 B_Memory L2
ENSG00000060688 SNRNP40 -547144 sc-eQTL 5.92e-02 -0.17 0.0896 0.397 B_Naive1 L2
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 9.09e-01 0.00893 0.078 0.397 B_Naive1 L2
ENSG00000134644 PUM1 -316347 sc-eQTL 4.31e-01 -0.0542 0.0687 0.397 B_Naive1 L2
ENSG00000162510 MATN1 26059 sc-eQTL 1.31e-02 0.172 0.0688 0.397 B_Naive1 L2
ENSG00000162511 LAPTM5 -8130 sc-eQTL 6.30e-01 -0.0225 0.0466 0.397 B_Naive1 L2
ENSG00000162517 PEF1 -895252 sc-eQTL 8.11e-01 -0.0197 0.0822 0.397 B_Naive1 L2
ENSG00000186056 MATN1-AS1 31140 sc-eQTL 4.77e-01 0.0436 0.0612 0.397 B_Naive1 L2
ENSG00000287510 AL137857.1 17951 sc-eQTL 5.17e-03 -0.21 0.0742 0.397 B_Naive1 L2
ENSG00000060688 SNRNP40 -547144 sc-eQTL 1.01e-01 0.16 0.0971 0.397 B_Naive2 L2
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 3.50e-01 0.0754 0.0805 0.397 B_Naive2 L2
ENSG00000134644 PUM1 -316347 sc-eQTL 5.25e-01 -0.0503 0.0789 0.397 B_Naive2 L2
ENSG00000162510 MATN1 26059 sc-eQTL 1.22e-01 0.117 0.0754 0.397 B_Naive2 L2
ENSG00000162511 LAPTM5 -8130 sc-eQTL 6.90e-01 -0.0206 0.0515 0.397 B_Naive2 L2
ENSG00000162517 PEF1 -895252 sc-eQTL 2.91e-01 0.0988 0.0934 0.397 B_Naive2 L2
ENSG00000186056 MATN1-AS1 31140 sc-eQTL 3.84e-01 0.0652 0.0748 0.397 B_Naive2 L2
ENSG00000287510 AL137857.1 17951 sc-eQTL 2.84e-01 0.0868 0.0808 0.397 B_Naive2 L2
ENSG00000060688 SNRNP40 -547144 sc-eQTL 6.85e-01 0.0392 0.0962 0.398 CD4_CTL L2
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 9.25e-01 -0.00888 0.0947 0.398 CD4_CTL L2
ENSG00000134644 PUM1 -316347 sc-eQTL 6.99e-03 -0.249 0.0912 0.398 CD4_CTL L2
ENSG00000162511 LAPTM5 -8130 sc-eQTL 5.92e-01 -0.0444 0.0827 0.398 CD4_CTL L2
ENSG00000162517 PEF1 -895252 sc-eQTL 2.94e-01 -0.0891 0.0846 0.398 CD4_CTL L2
ENSG00000186056 MATN1-AS1 31140 sc-eQTL 5.72e-01 -0.0512 0.0905 0.398 CD4_CTL L2
ENSG00000287510 AL137857.1 17951 sc-eQTL 2.78e-01 -0.0867 0.0797 0.398 CD4_CTL L2
ENSG00000060688 SNRNP40 -547144 sc-eQTL 6.49e-01 0.0342 0.0748 0.397 CD4_Naive L2
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 1.41e-01 -0.0975 0.066 0.397 CD4_Naive L2
ENSG00000134644 PUM1 -316347 sc-eQTL 9.45e-01 -0.00365 0.053 0.397 CD4_Naive L2
ENSG00000162511 LAPTM5 -8130 sc-eQTL 2.95e-01 -0.0594 0.0566 0.397 CD4_Naive L2
ENSG00000162517 PEF1 -895252 sc-eQTL 7.14e-01 0.0228 0.0622 0.397 CD4_Naive L2
ENSG00000186056 MATN1-AS1 31140 sc-eQTL 3.36e-01 0.0554 0.0575 0.397 CD4_Naive L2
ENSG00000287510 AL137857.1 17951 sc-eQTL 9.65e-01 0.00292 0.0662 0.397 CD4_Naive L2
ENSG00000060688 SNRNP40 -547144 sc-eQTL 9.18e-01 -0.0097 0.0942 0.397 CD4_TCM L2
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 6.23e-02 0.141 0.0753 0.397 CD4_TCM L2
ENSG00000134644 PUM1 -316347 sc-eQTL 8.35e-01 -0.014 0.0672 0.397 CD4_TCM L2
ENSG00000162511 LAPTM5 -8130 sc-eQTL 7.96e-03 -0.147 0.0548 0.397 CD4_TCM L2
ENSG00000162517 PEF1 -895252 sc-eQTL 9.22e-01 -0.00735 0.0747 0.397 CD4_TCM L2
ENSG00000186056 MATN1-AS1 31140 sc-eQTL 9.76e-01 0.0021 0.0707 0.397 CD4_TCM L2
ENSG00000287510 AL137857.1 17951 sc-eQTL 6.31e-01 -0.0379 0.0788 0.397 CD4_TCM L2
ENSG00000060688 SNRNP40 -547144 sc-eQTL 5.08e-02 -0.184 0.0938 0.397 CD4_TEM L2
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 5.19e-02 -0.175 0.0894 0.397 CD4_TEM L2
ENSG00000134644 PUM1 -316347 sc-eQTL 2.91e-01 -0.0794 0.075 0.397 CD4_TEM L2
ENSG00000162511 LAPTM5 -8130 sc-eQTL 2.09e-01 -0.0955 0.0757 0.397 CD4_TEM L2
ENSG00000162517 PEF1 -895252 sc-eQTL 3.08e-01 -0.0868 0.0849 0.397 CD4_TEM L2
ENSG00000186056 MATN1-AS1 31140 sc-eQTL 1.87e-01 -0.117 0.0886 0.397 CD4_TEM L2
ENSG00000287510 AL137857.1 17951 sc-eQTL 2.81e-01 0.0945 0.0874 0.397 CD4_TEM L2
ENSG00000060688 SNRNP40 -547144 sc-eQTL 6.71e-01 -0.0433 0.102 0.397 CD8_CTL L2
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 1.50e-01 -0.112 0.0776 0.397 CD8_CTL L2
ENSG00000134644 PUM1 -316347 sc-eQTL 4.16e-01 0.0616 0.0756 0.397 CD8_CTL L2
ENSG00000162511 LAPTM5 -8130 sc-eQTL 3.24e-01 -0.0826 0.0836 0.397 CD8_CTL L2
ENSG00000162517 PEF1 -895252 sc-eQTL 7.23e-01 0.0259 0.073 0.397 CD8_CTL L2
ENSG00000186056 MATN1-AS1 31140 sc-eQTL 4.39e-01 0.0682 0.088 0.397 CD8_CTL L2
ENSG00000287510 AL137857.1 17951 sc-eQTL 9.04e-01 -0.00997 0.0829 0.397 CD8_CTL L2
ENSG00000060688 SNRNP40 -547144 sc-eQTL 1.13e-01 0.148 0.0926 0.397 CD8_Naive L2
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 3.49e-01 -0.0753 0.0802 0.397 CD8_Naive L2
ENSG00000134644 PUM1 -316347 sc-eQTL 5.61e-01 -0.0376 0.0646 0.397 CD8_Naive L2
ENSG00000162511 LAPTM5 -8130 sc-eQTL 1.45e-01 -0.0903 0.0616 0.397 CD8_Naive L2
ENSG00000162517 PEF1 -895252 sc-eQTL 5.32e-01 0.0538 0.086 0.397 CD8_Naive L2
ENSG00000186056 MATN1-AS1 31140 sc-eQTL 9.44e-01 0.00547 0.0773 0.397 CD8_Naive L2
ENSG00000287510 AL137857.1 17951 sc-eQTL 5.58e-01 -0.0493 0.0841 0.397 CD8_Naive L2
ENSG00000060688 SNRNP40 -547144 sc-eQTL 5.73e-01 0.0579 0.103 0.398 CD8_TCM L2
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 8.50e-01 0.0178 0.0941 0.398 CD8_TCM L2
ENSG00000134644 PUM1 -316347 sc-eQTL 8.16e-01 0.0206 0.0885 0.398 CD8_TCM L2
ENSG00000162511 LAPTM5 -8130 sc-eQTL 8.60e-01 -0.0164 0.0926 0.398 CD8_TCM L2
ENSG00000162517 PEF1 -895252 sc-eQTL 7.00e-01 0.0365 0.0946 0.398 CD8_TCM L2
ENSG00000186056 MATN1-AS1 31140 sc-eQTL 3.53e-01 0.0796 0.0856 0.398 CD8_TCM L2
ENSG00000287510 AL137857.1 17951 sc-eQTL 7.32e-02 0.155 0.086 0.398 CD8_TCM L2
ENSG00000060688 SNRNP40 -547144 sc-eQTL 8.44e-01 -0.0196 0.0993 0.397 CD8_TEM L2
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 1.50e-01 -0.137 0.0947 0.397 CD8_TEM L2
ENSG00000134644 PUM1 -316347 sc-eQTL 4.15e-01 -0.0793 0.0972 0.397 CD8_TEM L2
ENSG00000162511 LAPTM5 -8130 sc-eQTL 2.51e-01 -0.105 0.0912 0.397 CD8_TEM L2
ENSG00000162517 PEF1 -895252 sc-eQTL 2.42e-01 0.101 0.0858 0.397 CD8_TEM L2
ENSG00000186056 MATN1-AS1 31140 sc-eQTL 6.53e-01 -0.0428 0.0949 0.397 CD8_TEM L2
ENSG00000287510 AL137857.1 17951 sc-eQTL 6.76e-01 -0.036 0.0859 0.397 CD8_TEM L2
ENSG00000060688 SNRNP40 -547144 sc-eQTL 4.91e-01 -0.0693 0.1 0.398 MAIT L2
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 9.82e-01 -0.00202 0.0891 0.398 MAIT L2
ENSG00000134644 PUM1 -316347 sc-eQTL 5.35e-01 0.053 0.0853 0.398 MAIT L2
ENSG00000162511 LAPTM5 -8130 sc-eQTL 2.07e-01 -0.102 0.0802 0.398 MAIT L2
ENSG00000162517 PEF1 -895252 sc-eQTL 3.80e-01 -0.0777 0.0883 0.398 MAIT L2
ENSG00000186056 MATN1-AS1 31140 sc-eQTL 1.15e-01 -0.141 0.0892 0.398 MAIT L2
ENSG00000287510 AL137857.1 17951 sc-eQTL 2.59e-02 0.205 0.0913 0.398 MAIT L2
ENSG00000060688 SNRNP40 -547144 sc-eQTL 3.95e-02 -0.203 0.098 0.396 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 5.59e-01 0.0489 0.0836 0.396 NK_CD56bright L2
ENSG00000134644 PUM1 -316347 sc-eQTL 6.82e-01 0.036 0.0879 0.396 NK_CD56bright L2
ENSG00000162511 LAPTM5 -8130 sc-eQTL 8.54e-01 -0.016 0.0867 0.396 NK_CD56bright L2
ENSG00000162517 PEF1 -895252 sc-eQTL 3.44e-01 0.0798 0.084 0.396 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 31140 sc-eQTL 6.17e-01 -0.0436 0.0871 0.396 NK_CD56bright L2
ENSG00000287510 AL137857.1 17951 sc-eQTL 4.04e-01 0.0717 0.0857 0.396 NK_CD56bright L2
ENSG00000060688 SNRNP40 -547144 sc-eQTL 9.69e-01 -0.00374 0.0969 0.399 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 3.46e-01 -0.0676 0.0715 0.399 NK_CD56dim L2
ENSG00000134644 PUM1 -316347 sc-eQTL 9.17e-01 -0.0077 0.0735 0.399 NK_CD56dim L2
ENSG00000162511 LAPTM5 -8130 sc-eQTL 3.91e-01 -0.0673 0.0783 0.399 NK_CD56dim L2
ENSG00000162517 PEF1 -895252 sc-eQTL 1.09e-01 -0.112 0.0693 0.399 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 31140 sc-eQTL 5.33e-01 0.0612 0.0981 0.399 NK_CD56dim L2
ENSG00000287510 AL137857.1 17951 sc-eQTL 3.80e-01 0.0712 0.0809 0.399 NK_CD56dim L2
ENSG00000060688 SNRNP40 -547144 sc-eQTL 8.15e-01 0.0235 0.1 0.39 NK_HLA L2
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 8.69e-01 -0.0147 0.0893 0.39 NK_HLA L2
ENSG00000134644 PUM1 -316347 sc-eQTL 5.03e-01 0.0583 0.0869 0.39 NK_HLA L2
ENSG00000162511 LAPTM5 -8130 sc-eQTL 4.06e-01 -0.069 0.0829 0.39 NK_HLA L2
ENSG00000162517 PEF1 -895252 sc-eQTL 4.53e-01 0.0702 0.0935 0.39 NK_HLA L2
ENSG00000186056 MATN1-AS1 31140 sc-eQTL 2.74e-01 -0.0966 0.0881 0.39 NK_HLA L2
ENSG00000287510 AL137857.1 17951 sc-eQTL 3.78e-01 -0.0753 0.0853 0.39 NK_HLA L2
ENSG00000060688 SNRNP40 -547144 sc-eQTL 8.06e-02 -0.163 0.0929 0.399 NK_cytokine L2
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 7.71e-01 -0.0213 0.073 0.399 NK_cytokine L2
ENSG00000134644 PUM1 -316347 sc-eQTL 9.15e-01 0.00841 0.0789 0.399 NK_cytokine L2
ENSG00000162511 LAPTM5 -8130 sc-eQTL 3.87e-01 -0.0752 0.0868 0.399 NK_cytokine L2
ENSG00000162517 PEF1 -895252 sc-eQTL 7.28e-01 -0.0257 0.074 0.399 NK_cytokine L2
ENSG00000186056 MATN1-AS1 31140 sc-eQTL 2.82e-01 -0.099 0.0919 0.399 NK_cytokine L2
ENSG00000287510 AL137857.1 17951 sc-eQTL 8.06e-01 0.0211 0.0857 0.399 NK_cytokine L2
ENSG00000060688 SNRNP40 -547144 sc-eQTL 9.15e-01 0.0118 0.11 0.385 PB L2
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 7.19e-01 -0.0461 0.128 0.385 PB L2
ENSG00000134644 PUM1 -316347 sc-eQTL 2.71e-01 -0.122 0.111 0.385 PB L2
ENSG00000162510 MATN1 26059 sc-eQTL 4.12e-01 0.0851 0.103 0.385 PB L2
ENSG00000162511 LAPTM5 -8130 sc-eQTL 3.66e-01 0.067 0.0738 0.385 PB L2
ENSG00000162517 PEF1 -895252 sc-eQTL 1.83e-01 -0.152 0.113 0.385 PB L2
ENSG00000186056 MATN1-AS1 31140 sc-eQTL 2.99e-01 -0.105 0.101 0.385 PB L2
ENSG00000287510 AL137857.1 17951 sc-eQTL 2.11e-01 -0.135 0.107 0.385 PB L2
ENSG00000060688 SNRNP40 -547144 sc-eQTL 8.66e-01 0.0126 0.0745 0.398 Pro_T L2
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 8.63e-01 -0.0164 0.0946 0.398 Pro_T L2
ENSG00000134644 PUM1 -316347 sc-eQTL 9.65e-01 -0.00386 0.0883 0.398 Pro_T L2
ENSG00000162511 LAPTM5 -8130 sc-eQTL 7.65e-01 0.019 0.0633 0.398 Pro_T L2
ENSG00000162517 PEF1 -895252 sc-eQTL 7.43e-01 0.0305 0.0929 0.398 Pro_T L2
ENSG00000186056 MATN1-AS1 31140 sc-eQTL 5.58e-01 -0.0519 0.0884 0.398 Pro_T L2
ENSG00000287510 AL137857.1 17951 sc-eQTL 3.24e-01 0.0803 0.0812 0.398 Pro_T L2
ENSG00000060688 SNRNP40 -547144 sc-eQTL 6.68e-01 -0.042 0.0978 0.397 Treg L2
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 7.78e-01 -0.0267 0.0946 0.397 Treg L2
ENSG00000134644 PUM1 -316347 sc-eQTL 9.00e-01 -0.00954 0.0757 0.397 Treg L2
ENSG00000162511 LAPTM5 -8130 sc-eQTL 4.10e-01 -0.0714 0.0866 0.397 Treg L2
ENSG00000162517 PEF1 -895252 sc-eQTL 3.75e-02 0.194 0.0927 0.397 Treg L2
ENSG00000186056 MATN1-AS1 31140 sc-eQTL 1.10e-01 -0.141 0.0878 0.397 Treg L2
ENSG00000287510 AL137857.1 17951 sc-eQTL 7.63e-01 -0.0267 0.0882 0.397 Treg L2
ENSG00000060688 SNRNP40 -547144 sc-eQTL 6.89e-01 -0.039 0.0972 0.398 cDC L2
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 2.69e-01 -0.116 0.105 0.398 cDC L2
ENSG00000134644 PUM1 -316347 sc-eQTL 8.18e-01 -0.0209 0.0904 0.398 cDC L2
ENSG00000162511 LAPTM5 -8130 sc-eQTL 8.67e-01 0.0106 0.0634 0.398 cDC L2
ENSG00000162517 PEF1 -895252 sc-eQTL 6.62e-01 -0.0402 0.0917 0.398 cDC L2
ENSG00000168528 SERINC2 -659921 sc-eQTL 5.30e-01 -0.0512 0.0813 0.398 cDC L2
ENSG00000284543 LINC01226 -756582 sc-eQTL 6.61e-01 0.0351 0.0799 0.398 cDC L2
ENSG00000287510 AL137857.1 17951 sc-eQTL 7.98e-01 -0.022 0.0861 0.398 cDC L2
ENSG00000060688 SNRNP40 -547144 sc-eQTL 1.80e-01 -0.104 0.0776 0.397 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 2.67e-02 -0.192 0.0859 0.397 cMono_IL1B L2
ENSG00000134644 PUM1 -316347 sc-eQTL 6.93e-01 0.0232 0.0588 0.397 cMono_IL1B L2
ENSG00000162511 LAPTM5 -8130 sc-eQTL 6.38e-01 0.0243 0.0516 0.397 cMono_IL1B L2
ENSG00000162512 SDC3 -159114 sc-eQTL 5.79e-01 -0.0541 0.0972 0.397 cMono_IL1B L2
ENSG00000162517 PEF1 -895252 sc-eQTL 7.29e-01 0.0276 0.0795 0.397 cMono_IL1B L2
ENSG00000168528 SERINC2 -659921 sc-eQTL 3.01e-03 -0.29 0.0964 0.397 cMono_IL1B L2
ENSG00000284543 LINC01226 -756582 sc-eQTL 8.81e-01 0.013 0.0871 0.397 cMono_IL1B L2
ENSG00000287510 AL137857.1 17951 sc-eQTL 7.75e-01 0.0233 0.0812 0.397 cMono_IL1B L2
ENSG00000060688 SNRNP40 -547144 sc-eQTL 8.83e-01 0.0121 0.0821 0.397 cMono_S100A L2
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 8.62e-01 -0.0168 0.097 0.397 cMono_S100A L2
ENSG00000134644 PUM1 -316347 sc-eQTL 3.61e-01 -0.064 0.0699 0.397 cMono_S100A L2
ENSG00000162511 LAPTM5 -8130 sc-eQTL 5.83e-01 0.0296 0.0538 0.397 cMono_S100A L2
ENSG00000162512 SDC3 -159114 sc-eQTL 7.34e-01 -0.0317 0.093 0.397 cMono_S100A L2
ENSG00000162517 PEF1 -895252 sc-eQTL 2.49e-01 0.0968 0.0838 0.397 cMono_S100A L2
ENSG00000168528 SERINC2 -659921 sc-eQTL 3.87e-02 -0.203 0.0975 0.397 cMono_S100A L2
ENSG00000284543 LINC01226 -756582 sc-eQTL 1.00e+00 -3.25e-05 0.08 0.397 cMono_S100A L2
ENSG00000287510 AL137857.1 17951 sc-eQTL 4.66e-01 0.0586 0.0803 0.397 cMono_S100A L2
ENSG00000060688 SNRNP40 -547144 sc-eQTL 3.68e-01 0.106 0.118 0.4 gdT L2
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 3.50e-02 -0.212 0.0997 0.4 gdT L2
ENSG00000134644 PUM1 -316347 sc-eQTL 2.74e-01 0.114 0.104 0.4 gdT L2
ENSG00000162511 LAPTM5 -8130 sc-eQTL 9.82e-01 -0.00261 0.114 0.4 gdT L2
ENSG00000162517 PEF1 -895252 sc-eQTL 6.28e-01 0.0503 0.104 0.4 gdT L2
ENSG00000186056 MATN1-AS1 31140 sc-eQTL 2.54e-01 0.119 0.104 0.4 gdT L2
ENSG00000287510 AL137857.1 17951 sc-eQTL 9.57e-01 -0.00546 0.101 0.4 gdT L2
ENSG00000060688 SNRNP40 -547144 sc-eQTL 4.88e-01 -0.0629 0.0905 0.402 intMono L2
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 1.53e-01 0.139 0.0969 0.402 intMono L2
ENSG00000134644 PUM1 -316347 sc-eQTL 6.04e-01 -0.0429 0.0825 0.402 intMono L2
ENSG00000162511 LAPTM5 -8130 sc-eQTL 5.20e-01 0.0417 0.0647 0.402 intMono L2
ENSG00000162512 SDC3 -159114 sc-eQTL 6.26e-01 0.0433 0.0887 0.402 intMono L2
ENSG00000162517 PEF1 -895252 sc-eQTL 9.49e-01 -0.00599 0.0932 0.402 intMono L2
ENSG00000168528 SERINC2 -659921 sc-eQTL 6.65e-02 -0.17 0.0921 0.402 intMono L2
ENSG00000284543 LINC01226 -756582 sc-eQTL 7.45e-01 -0.0286 0.088 0.402 intMono L2
ENSG00000287510 AL137857.1 17951 sc-eQTL 5.03e-01 0.0589 0.0879 0.402 intMono L2
ENSG00000060688 SNRNP40 -547144 sc-eQTL 8.07e-01 -0.0206 0.0841 0.396 ncMono L2
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 8.07e-01 0.0219 0.0897 0.396 ncMono L2
ENSG00000134644 PUM1 -316347 sc-eQTL 5.96e-01 -0.0389 0.0733 0.396 ncMono L2
ENSG00000162511 LAPTM5 -8130 sc-eQTL 2.68e-01 0.0738 0.0664 0.396 ncMono L2
ENSG00000162512 SDC3 -159114 sc-eQTL 9.71e-02 0.124 0.0741 0.396 ncMono L2
ENSG00000162517 PEF1 -895252 sc-eQTL 2.04e-01 -0.109 0.0853 0.396 ncMono L2
ENSG00000168528 SERINC2 -659921 sc-eQTL 5.32e-03 -0.225 0.0799 0.396 ncMono L2
ENSG00000284543 LINC01226 -756582 sc-eQTL 7.51e-01 0.0259 0.0814 0.396 ncMono L2
ENSG00000287510 AL137857.1 17951 sc-eQTL 5.71e-01 0.0478 0.0843 0.396 ncMono L2
ENSG00000060688 SNRNP40 -547144 sc-eQTL 1.31e-01 0.143 0.0942 0.404 pDC L2
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 1.11e-01 -0.166 0.103 0.404 pDC L2
ENSG00000134644 PUM1 -316347 sc-eQTL 4.69e-01 0.0626 0.0862 0.404 pDC L2
ENSG00000162511 LAPTM5 -8130 sc-eQTL 8.67e-01 0.0134 0.0803 0.404 pDC L2
ENSG00000162517 PEF1 -895252 sc-eQTL 2.51e-01 0.119 0.104 0.404 pDC L2
ENSG00000168528 SERINC2 -659921 sc-eQTL 3.86e-01 -0.0844 0.0971 0.404 pDC L2
ENSG00000284543 LINC01226 -756582 sc-eQTL 8.73e-01 0.0121 0.0756 0.404 pDC L2
ENSG00000287510 AL137857.1 17951 sc-eQTL 4.02e-01 -0.0746 0.0887 0.404 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -547144 sc-eQTL 6.11e-01 0.0489 0.0959 0.397 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 2.41e-01 -0.0936 0.0796 0.397 B_Memory LOneK1K
ENSG00000134644 PUM1 -316347 sc-eQTL 4.80e-01 0.05 0.0707 0.397 B_Memory LOneK1K
ENSG00000162510 MATN1 26059 sc-eQTL 1.70e-01 0.111 0.0804 0.397 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -8130 sc-eQTL 2.78e-01 -0.055 0.0506 0.397 B_Memory LOneK1K
ENSG00000162517 PEF1 -895252 sc-eQTL 6.20e-01 0.0417 0.084 0.397 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 31140 sc-eQTL 1.98e-01 -0.0862 0.0668 0.397 B_Memory LOneK1K
ENSG00000287510 AL137857.1 17951 sc-eQTL 8.23e-01 0.0163 0.0731 0.397 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -547144 sc-eQTL 7.75e-01 -0.0251 0.0878 0.397 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 7.63e-01 0.021 0.0694 0.397 B_Naive LOneK1K
ENSG00000134644 PUM1 -316347 sc-eQTL 8.07e-01 -0.0161 0.0656 0.397 B_Naive LOneK1K
ENSG00000162510 MATN1 26059 sc-eQTL 5.03e-03 0.176 0.062 0.397 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -8130 sc-eQTL 4.35e-01 -0.0347 0.0444 0.397 B_Naive LOneK1K
ENSG00000162517 PEF1 -895252 sc-eQTL 6.77e-01 0.0338 0.0812 0.397 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 31140 sc-eQTL 3.17e-01 0.0576 0.0573 0.397 B_Naive LOneK1K
ENSG00000287510 AL137857.1 17951 sc-eQTL 2.90e-01 -0.0722 0.0681 0.397 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -547144 sc-eQTL 4.15e-01 -0.0605 0.0739 0.397 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 6.19e-02 -0.156 0.0832 0.397 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -316347 sc-eQTL 9.51e-01 -0.00326 0.0535 0.397 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -8130 sc-eQTL 4.33e-01 0.0369 0.047 0.397 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -159114 sc-eQTL 5.22e-01 -0.0614 0.0958 0.397 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -895252 sc-eQTL 2.35e-01 0.08 0.0672 0.397 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -659921 sc-eQTL 5.99e-03 -0.269 0.0969 0.397 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -756582 sc-eQTL 9.10e-01 -0.00914 0.0809 0.397 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 17951 sc-eQTL 7.20e-01 0.0271 0.0757 0.397 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -547144 sc-eQTL 4.01e-01 -0.0679 0.0807 0.399 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 1.28e-01 0.135 0.088 0.399 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -316347 sc-eQTL 4.16e-01 -0.0589 0.0724 0.399 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -8130 sc-eQTL 1.94e-01 0.0753 0.0578 0.399 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -159114 sc-eQTL 1.72e-01 0.116 0.0843 0.399 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -895252 sc-eQTL 6.25e-01 -0.0377 0.0769 0.399 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -659921 sc-eQTL 8.23e-03 -0.23 0.0864 0.399 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -756582 sc-eQTL 9.61e-01 -0.00407 0.0834 0.399 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 17951 sc-eQTL 3.88e-01 0.0722 0.0833 0.399 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -547144 sc-eQTL 3.85e-01 -0.08 0.0919 0.399 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -547338 sc-eQTL 2.96e-01 -0.0658 0.0628 0.399 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -316347 sc-eQTL 8.84e-01 0.0101 0.0689 0.399 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -8130 sc-eQTL 2.12e-01 -0.0961 0.0768 0.399 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -895252 sc-eQTL 7.69e-01 -0.0172 0.0585 0.399 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 31140 sc-eQTL 8.27e-01 -0.0194 0.0889 0.399 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 17951 sc-eQTL 4.98e-01 0.052 0.0766 0.399 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000168528 SERINC2 -659921 eQTL 0.00113 -0.142 0.0436 0.0 0.0 0.354
ENSG00000237329 AL356320.2 -287090 eQTL 0.0242 -0.0893 0.0395 0.00157 0.0 0.354

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162510 \N 26059 0.000146 3.89e-05 7.85e-06 1.38e-05 4.7e-06 2.41e-05 5.04e-05 2.46e-06 2.93e-05 1.01e-05 3.55e-05 1.29e-05 5.86e-05 1.14e-05 5.98e-06 2e-05 1.56e-05 2.83e-05 7.51e-06 4.29e-06 1.42e-05 3.78e-05 3.68e-05 8.48e-06 3.43e-05 7.94e-06 9.55e-06 8.12e-06 4.02e-05 2.67e-05 1.76e-05 1.22e-06 2.07e-06 5.34e-06 8.41e-06 4.46e-06 1.86e-06 2.69e-06 2.73e-06 2.36e-06 1.48e-06 5.65e-05 5.69e-06 1.47e-07 2.21e-06 2.75e-06 3.97e-06 1.3e-06 1.1e-06
ENSG00000237329 AL356320.2 -287090 1.89e-06 2.4e-07 7e-08 2.05e-07 9.21e-08 2.86e-07 3.42e-07 5.2e-08 2.76e-07 5.42e-08 2.62e-07 9.19e-08 2.24e-07 8.15e-08 5.91e-08 1.1e-07 4.12e-08 2.83e-07 5.97e-08 4.03e-08 1.59e-07 2.15e-07 1.68e-07 3.49e-08 2.02e-07 1.16e-07 1.13e-07 9.65e-08 1.32e-07 1.33e-07 1.39e-07 3.72e-08 3.3e-08 8e-08 3.81e-08 3.6e-08 4.91e-08 9.6e-08 8.42e-08 3.74e-08 3.55e-08 2e-07 1.66e-07 1.12e-08 7.91e-08 1.55e-08 1.26e-07 4.6e-09 4.61e-08