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Genes within 1Mb (chr1:30732949:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -563839 sc-eQTL 6.60e-02 -0.146 0.0792 0.667 B L1
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 1.65e-01 -0.0887 0.0636 0.667 B L1
ENSG00000134644 PUM1 -333042 sc-eQTL 5.95e-01 0.0285 0.0536 0.667 B L1
ENSG00000162510 MATN1 9364 sc-eQTL 1.41e-01 -0.0829 0.0561 0.667 B L1
ENSG00000162511 LAPTM5 -24825 sc-eQTL 3.92e-01 0.0378 0.0441 0.667 B L1
ENSG00000162517 PEF1 -911947 sc-eQTL 4.67e-01 0.0485 0.0666 0.667 B L1
ENSG00000186056 MATN1-AS1 14445 sc-eQTL 7.64e-01 -0.0156 0.0517 0.667 B L1
ENSG00000287510 AL137857.1 1256 sc-eQTL 5.42e-01 0.0374 0.0612 0.667 B L1
ENSG00000060688 SNRNP40 -563839 sc-eQTL 9.31e-01 0.0061 0.07 0.667 CD4T L1
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 3.38e-01 0.0524 0.0545 0.667 CD4T L1
ENSG00000134644 PUM1 -333042 sc-eQTL 3.18e-01 0.0486 0.0485 0.667 CD4T L1
ENSG00000162511 LAPTM5 -24825 sc-eQTL 1.56e-01 0.0764 0.0537 0.667 CD4T L1
ENSG00000162517 PEF1 -911947 sc-eQTL 5.19e-01 0.0364 0.0563 0.667 CD4T L1
ENSG00000186056 MATN1-AS1 14445 sc-eQTL 2.66e-01 -0.0536 0.0481 0.667 CD4T L1
ENSG00000287510 AL137857.1 1256 sc-eQTL 6.79e-01 -0.024 0.0578 0.667 CD4T L1
ENSG00000060688 SNRNP40 -563839 sc-eQTL 8.82e-01 0.0135 0.091 0.667 CD8T L1
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 4.02e-01 -0.0507 0.0604 0.667 CD8T L1
ENSG00000134644 PUM1 -333042 sc-eQTL 5.90e-02 0.1 0.0529 0.667 CD8T L1
ENSG00000162511 LAPTM5 -24825 sc-eQTL 2.94e-02 0.112 0.0512 0.667 CD8T L1
ENSG00000162517 PEF1 -911947 sc-eQTL 7.60e-01 -0.0195 0.0638 0.667 CD8T L1
ENSG00000186056 MATN1-AS1 14445 sc-eQTL 3.12e-01 -0.0614 0.0605 0.667 CD8T L1
ENSG00000287510 AL137857.1 1256 sc-eQTL 9.34e-02 0.128 0.0757 0.667 CD8T L1
ENSG00000060688 SNRNP40 -563839 sc-eQTL 2.33e-01 -0.0964 0.0805 0.664 DC L1
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 3.91e-01 0.0821 0.0955 0.664 DC L1
ENSG00000134644 PUM1 -333042 sc-eQTL 5.80e-01 -0.0415 0.0749 0.664 DC L1
ENSG00000162511 LAPTM5 -24825 sc-eQTL 8.75e-01 0.00845 0.0535 0.664 DC L1
ENSG00000162517 PEF1 -911947 sc-eQTL 3.28e-01 -0.0848 0.0865 0.664 DC L1
ENSG00000168528 SERINC2 -676616 sc-eQTL 9.42e-01 -0.00639 0.0882 0.664 DC L1
ENSG00000284543 LINC01226 -773277 sc-eQTL 7.55e-01 0.0183 0.0584 0.664 DC L1
ENSG00000287510 AL137857.1 1256 sc-eQTL 1.44e-01 -0.123 0.0842 0.664 DC L1
ENSG00000060688 SNRNP40 -563839 sc-eQTL 3.59e-01 0.0579 0.0629 0.667 Mono L1
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 9.26e-01 -0.00729 0.0782 0.667 Mono L1
ENSG00000134644 PUM1 -333042 sc-eQTL 5.03e-01 0.0336 0.0501 0.667 Mono L1
ENSG00000162511 LAPTM5 -24825 sc-eQTL 4.02e-01 0.0386 0.046 0.667 Mono L1
ENSG00000162512 SDC3 -175809 sc-eQTL 9.87e-02 -0.146 0.088 0.667 Mono L1
ENSG00000162517 PEF1 -911947 sc-eQTL 2.41e-01 -0.0728 0.0619 0.667 Mono L1
ENSG00000168528 SERINC2 -676616 sc-eQTL 9.67e-01 0.00389 0.0951 0.667 Mono L1
ENSG00000284543 LINC01226 -773277 sc-eQTL 7.36e-01 -0.0283 0.0837 0.667 Mono L1
ENSG00000287510 AL137857.1 1256 sc-eQTL 3.51e-01 0.0682 0.073 0.667 Mono L1
ENSG00000060688 SNRNP40 -563839 sc-eQTL 1.96e-01 0.115 0.0886 0.667 NK L1
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 6.70e-01 -0.026 0.0609 0.667 NK L1
ENSG00000134644 PUM1 -333042 sc-eQTL 6.62e-01 0.0279 0.0639 0.667 NK L1
ENSG00000162511 LAPTM5 -24825 sc-eQTL 1.94e-01 0.0955 0.0732 0.667 NK L1
ENSG00000162517 PEF1 -911947 sc-eQTL 7.06e-01 -0.0203 0.0537 0.667 NK L1
ENSG00000186056 MATN1-AS1 14445 sc-eQTL 7.38e-01 -0.0277 0.0826 0.667 NK L1
ENSG00000287510 AL137857.1 1256 sc-eQTL 1.56e-01 0.108 0.0759 0.667 NK L1
ENSG00000060688 SNRNP40 -563839 sc-eQTL 8.55e-01 -0.0122 0.0667 0.667 Other_T L1
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 7.76e-01 0.0203 0.0713 0.667 Other_T L1
ENSG00000134644 PUM1 -333042 sc-eQTL 1.19e-01 -0.0998 0.0637 0.667 Other_T L1
ENSG00000162511 LAPTM5 -24825 sc-eQTL 4.65e-02 0.104 0.052 0.667 Other_T L1
ENSG00000162517 PEF1 -911947 sc-eQTL 1.29e-01 0.106 0.0698 0.667 Other_T L1
ENSG00000186056 MATN1-AS1 14445 sc-eQTL 3.43e-01 0.0815 0.0858 0.667 Other_T L1
ENSG00000287510 AL137857.1 1256 sc-eQTL 4.10e-01 0.0739 0.0895 0.667 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -563839 sc-eQTL 5.89e-01 0.0565 0.104 0.666 B_Activated L2
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 7.58e-01 0.0324 0.105 0.666 B_Activated L2
ENSG00000134644 PUM1 -333042 sc-eQTL 7.87e-01 0.0264 0.0978 0.666 B_Activated L2
ENSG00000162510 MATN1 9364 sc-eQTL 7.51e-01 0.0272 0.0855 0.666 B_Activated L2
ENSG00000162511 LAPTM5 -24825 sc-eQTL 8.39e-01 -0.0121 0.0596 0.666 B_Activated L2
ENSG00000162517 PEF1 -911947 sc-eQTL 1.98e-02 0.235 0.0999 0.666 B_Activated L2
ENSG00000186056 MATN1-AS1 14445 sc-eQTL 2.76e-01 0.105 0.0959 0.666 B_Activated L2
ENSG00000287510 AL137857.1 1256 sc-eQTL 3.14e-01 -0.0859 0.0849 0.666 B_Activated L2
ENSG00000060688 SNRNP40 -563839 sc-eQTL 8.32e-01 0.0207 0.0975 0.665 B_Intermediate L2
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 9.38e-01 -0.0063 0.0813 0.665 B_Intermediate L2
ENSG00000134644 PUM1 -333042 sc-eQTL 6.23e-01 0.0377 0.0766 0.665 B_Intermediate L2
ENSG00000162510 MATN1 9364 sc-eQTL 2.87e-01 0.085 0.0796 0.665 B_Intermediate L2
ENSG00000162511 LAPTM5 -24825 sc-eQTL 7.17e-02 0.088 0.0486 0.665 B_Intermediate L2
ENSG00000162517 PEF1 -911947 sc-eQTL 6.91e-01 0.0362 0.0909 0.665 B_Intermediate L2
ENSG00000186056 MATN1-AS1 14445 sc-eQTL 7.22e-01 0.0245 0.0687 0.665 B_Intermediate L2
ENSG00000287510 AL137857.1 1256 sc-eQTL 5.55e-01 -0.0455 0.0769 0.665 B_Intermediate L2
ENSG00000060688 SNRNP40 -563839 sc-eQTL 5.16e-01 -0.0623 0.0958 0.668 B_Memory L2
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 7.72e-01 0.0257 0.0883 0.668 B_Memory L2
ENSG00000134644 PUM1 -333042 sc-eQTL 9.59e-01 -0.00398 0.0769 0.668 B_Memory L2
ENSG00000162510 MATN1 9364 sc-eQTL 7.76e-01 0.0209 0.0735 0.668 B_Memory L2
ENSG00000162511 LAPTM5 -24825 sc-eQTL 3.05e-01 0.0668 0.065 0.668 B_Memory L2
ENSG00000162517 PEF1 -911947 sc-eQTL 8.54e-01 0.016 0.087 0.668 B_Memory L2
ENSG00000186056 MATN1-AS1 14445 sc-eQTL 5.78e-01 0.0415 0.0745 0.668 B_Memory L2
ENSG00000287510 AL137857.1 1256 sc-eQTL 1.65e-01 0.121 0.087 0.668 B_Memory L2
ENSG00000060688 SNRNP40 -563839 sc-eQTL 9.89e-01 -0.00122 0.088 0.667 B_Naive1 L2
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 2.80e-01 -0.082 0.0758 0.667 B_Naive1 L2
ENSG00000134644 PUM1 -333042 sc-eQTL 4.27e-01 0.0533 0.067 0.667 B_Naive1 L2
ENSG00000162510 MATN1 9364 sc-eQTL 5.20e-02 -0.132 0.0674 0.667 B_Naive1 L2
ENSG00000162511 LAPTM5 -24825 sc-eQTL 2.56e-01 0.0516 0.0453 0.667 B_Naive1 L2
ENSG00000162517 PEF1 -911947 sc-eQTL 1.34e-01 0.12 0.0797 0.667 B_Naive1 L2
ENSG00000186056 MATN1-AS1 14445 sc-eQTL 5.22e-01 -0.0382 0.0596 0.667 B_Naive1 L2
ENSG00000287510 AL137857.1 1256 sc-eQTL 2.04e-02 0.17 0.0728 0.667 B_Naive1 L2
ENSG00000060688 SNRNP40 -563839 sc-eQTL 1.29e-03 -0.297 0.091 0.667 B_Naive2 L2
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 1.40e-03 -0.243 0.0752 0.667 B_Naive2 L2
ENSG00000134644 PUM1 -333042 sc-eQTL 2.98e-01 -0.0785 0.0752 0.667 B_Naive2 L2
ENSG00000162510 MATN1 9364 sc-eQTL 2.40e-01 -0.0851 0.0721 0.667 B_Naive2 L2
ENSG00000162511 LAPTM5 -24825 sc-eQTL 2.02e-02 0.114 0.0485 0.667 B_Naive2 L2
ENSG00000162517 PEF1 -911947 sc-eQTL 3.23e-01 -0.0883 0.0892 0.667 B_Naive2 L2
ENSG00000186056 MATN1-AS1 14445 sc-eQTL 1.18e-01 -0.112 0.0711 0.667 B_Naive2 L2
ENSG00000287510 AL137857.1 1256 sc-eQTL 2.88e-01 -0.0821 0.0771 0.667 B_Naive2 L2
ENSG00000060688 SNRNP40 -563839 sc-eQTL 3.50e-01 0.0866 0.0924 0.664 CD4_CTL L2
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 9.44e-01 -0.00641 0.0911 0.664 CD4_CTL L2
ENSG00000134644 PUM1 -333042 sc-eQTL 6.38e-01 0.042 0.0893 0.664 CD4_CTL L2
ENSG00000162511 LAPTM5 -24825 sc-eQTL 2.80e-01 0.086 0.0794 0.664 CD4_CTL L2
ENSG00000162517 PEF1 -911947 sc-eQTL 8.87e-01 0.0116 0.0816 0.664 CD4_CTL L2
ENSG00000186056 MATN1-AS1 14445 sc-eQTL 2.31e-01 0.104 0.0868 0.664 CD4_CTL L2
ENSG00000287510 AL137857.1 1256 sc-eQTL 9.46e-01 -0.00523 0.0769 0.664 CD4_CTL L2
ENSG00000060688 SNRNP40 -563839 sc-eQTL 2.95e-01 -0.0765 0.0729 0.667 CD4_Naive L2
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 7.08e-01 -0.0243 0.0648 0.667 CD4_Naive L2
ENSG00000134644 PUM1 -333042 sc-eQTL 1.77e-01 0.0698 0.0515 0.667 CD4_Naive L2
ENSG00000162511 LAPTM5 -24825 sc-eQTL 2.19e-01 0.0681 0.0552 0.667 CD4_Naive L2
ENSG00000162517 PEF1 -911947 sc-eQTL 7.99e-01 0.0155 0.0608 0.667 CD4_Naive L2
ENSG00000186056 MATN1-AS1 14445 sc-eQTL 7.08e-02 -0.101 0.0558 0.667 CD4_Naive L2
ENSG00000287510 AL137857.1 1256 sc-eQTL 7.70e-01 0.0189 0.0646 0.667 CD4_Naive L2
ENSG00000060688 SNRNP40 -563839 sc-eQTL 1.55e-01 0.13 0.0912 0.667 CD4_TCM L2
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 6.17e-01 0.037 0.0739 0.667 CD4_TCM L2
ENSG00000134644 PUM1 -333042 sc-eQTL 3.48e-01 0.0614 0.0653 0.667 CD4_TCM L2
ENSG00000162511 LAPTM5 -24825 sc-eQTL 3.16e-02 0.116 0.0537 0.667 CD4_TCM L2
ENSG00000162517 PEF1 -911947 sc-eQTL 6.06e-01 0.0375 0.0727 0.667 CD4_TCM L2
ENSG00000186056 MATN1-AS1 14445 sc-eQTL 6.25e-01 -0.0337 0.0688 0.667 CD4_TCM L2
ENSG00000287510 AL137857.1 1256 sc-eQTL 2.11e-02 -0.176 0.0758 0.667 CD4_TCM L2
ENSG00000060688 SNRNP40 -563839 sc-eQTL 7.07e-01 0.0344 0.0915 0.667 CD4_TEM L2
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 1.17e-02 0.219 0.086 0.667 CD4_TEM L2
ENSG00000134644 PUM1 -333042 sc-eQTL 6.96e-01 0.0284 0.0727 0.667 CD4_TEM L2
ENSG00000162511 LAPTM5 -24825 sc-eQTL 4.99e-02 0.144 0.0728 0.667 CD4_TEM L2
ENSG00000162517 PEF1 -911947 sc-eQTL 7.13e-01 0.0303 0.0823 0.667 CD4_TEM L2
ENSG00000186056 MATN1-AS1 14445 sc-eQTL 5.61e-01 -0.05 0.0859 0.667 CD4_TEM L2
ENSG00000287510 AL137857.1 1256 sc-eQTL 1.46e-01 0.123 0.0843 0.667 CD4_TEM L2
ENSG00000060688 SNRNP40 -563839 sc-eQTL 9.99e-01 0.000136 0.0991 0.667 CD8_CTL L2
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 4.37e-01 -0.0591 0.0759 0.667 CD8_CTL L2
ENSG00000134644 PUM1 -333042 sc-eQTL 2.08e-01 0.0928 0.0735 0.667 CD8_CTL L2
ENSG00000162511 LAPTM5 -24825 sc-eQTL 6.02e-01 0.0427 0.0817 0.667 CD8_CTL L2
ENSG00000162517 PEF1 -911947 sc-eQTL 1.18e-01 0.111 0.0707 0.667 CD8_CTL L2
ENSG00000186056 MATN1-AS1 14445 sc-eQTL 3.54e-02 -0.18 0.085 0.667 CD8_CTL L2
ENSG00000287510 AL137857.1 1256 sc-eQTL 5.25e-01 0.0513 0.0807 0.667 CD8_CTL L2
ENSG00000060688 SNRNP40 -563839 sc-eQTL 6.78e-01 -0.038 0.0914 0.667 CD8_Naive L2
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 5.06e-01 -0.0524 0.0788 0.667 CD8_Naive L2
ENSG00000134644 PUM1 -333042 sc-eQTL 6.87e-01 0.0256 0.0634 0.667 CD8_Naive L2
ENSG00000162511 LAPTM5 -24825 sc-eQTL 8.25e-05 0.235 0.0586 0.667 CD8_Naive L2
ENSG00000162517 PEF1 -911947 sc-eQTL 4.42e-01 -0.065 0.0844 0.667 CD8_Naive L2
ENSG00000186056 MATN1-AS1 14445 sc-eQTL 8.42e-01 0.0151 0.0759 0.667 CD8_Naive L2
ENSG00000287510 AL137857.1 1256 sc-eQTL 2.85e-01 0.0884 0.0824 0.667 CD8_Naive L2
ENSG00000060688 SNRNP40 -563839 sc-eQTL 8.83e-01 0.0149 0.101 0.662 CD8_TCM L2
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 9.91e-01 0.000996 0.0926 0.662 CD8_TCM L2
ENSG00000134644 PUM1 -333042 sc-eQTL 7.90e-01 -0.0232 0.0871 0.662 CD8_TCM L2
ENSG00000162511 LAPTM5 -24825 sc-eQTL 7.07e-01 0.0343 0.0911 0.662 CD8_TCM L2
ENSG00000162517 PEF1 -911947 sc-eQTL 6.02e-01 -0.0486 0.0931 0.662 CD8_TCM L2
ENSG00000186056 MATN1-AS1 14445 sc-eQTL 1.78e-01 -0.113 0.084 0.662 CD8_TCM L2
ENSG00000287510 AL137857.1 1256 sc-eQTL 9.53e-01 0.00505 0.0853 0.662 CD8_TCM L2
ENSG00000060688 SNRNP40 -563839 sc-eQTL 7.64e-01 0.0287 0.0955 0.667 CD8_TEM L2
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 6.60e-01 0.0404 0.0915 0.667 CD8_TEM L2
ENSG00000134644 PUM1 -333042 sc-eQTL 4.30e-01 -0.0738 0.0934 0.667 CD8_TEM L2
ENSG00000162511 LAPTM5 -24825 sc-eQTL 7.84e-01 0.0242 0.088 0.667 CD8_TEM L2
ENSG00000162517 PEF1 -911947 sc-eQTL 2.81e-01 -0.0893 0.0826 0.667 CD8_TEM L2
ENSG00000186056 MATN1-AS1 14445 sc-eQTL 4.89e-01 -0.0633 0.0912 0.667 CD8_TEM L2
ENSG00000287510 AL137857.1 1256 sc-eQTL 3.04e-02 -0.178 0.0817 0.667 CD8_TEM L2
ENSG00000060688 SNRNP40 -563839 sc-eQTL 9.59e-01 0.00498 0.0972 0.665 MAIT L2
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 3.29e-01 0.0841 0.0859 0.665 MAIT L2
ENSG00000134644 PUM1 -333042 sc-eQTL 8.14e-01 -0.0195 0.0825 0.665 MAIT L2
ENSG00000162511 LAPTM5 -24825 sc-eQTL 1.42e-01 0.114 0.0774 0.665 MAIT L2
ENSG00000162517 PEF1 -911947 sc-eQTL 9.80e-01 0.00217 0.0855 0.665 MAIT L2
ENSG00000186056 MATN1-AS1 14445 sc-eQTL 4.51e-01 0.0653 0.0866 0.665 MAIT L2
ENSG00000287510 AL137857.1 1256 sc-eQTL 4.12e-01 -0.0733 0.0892 0.665 MAIT L2
ENSG00000060688 SNRNP40 -563839 sc-eQTL 4.43e-01 0.0754 0.098 0.669 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 4.14e-01 -0.0678 0.0828 0.669 NK_CD56bright L2
ENSG00000134644 PUM1 -333042 sc-eQTL 9.60e-01 0.00439 0.0871 0.669 NK_CD56bright L2
ENSG00000162511 LAPTM5 -24825 sc-eQTL 6.42e-02 0.158 0.0851 0.669 NK_CD56bright L2
ENSG00000162517 PEF1 -911947 sc-eQTL 8.72e-01 -0.0134 0.0834 0.669 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 14445 sc-eQTL 3.37e-01 0.0829 0.0861 0.669 NK_CD56bright L2
ENSG00000287510 AL137857.1 1256 sc-eQTL 6.81e-01 0.035 0.085 0.669 NK_CD56bright L2
ENSG00000060688 SNRNP40 -563839 sc-eQTL 9.28e-01 0.0085 0.0941 0.668 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 8.74e-01 -0.0111 0.0696 0.668 NK_CD56dim L2
ENSG00000134644 PUM1 -333042 sc-eQTL 9.18e-01 -0.00739 0.0714 0.668 NK_CD56dim L2
ENSG00000162511 LAPTM5 -24825 sc-eQTL 5.59e-01 0.0445 0.076 0.668 NK_CD56dim L2
ENSG00000162517 PEF1 -911947 sc-eQTL 6.19e-01 0.0337 0.0677 0.668 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 14445 sc-eQTL 7.73e-01 -0.0276 0.0953 0.668 NK_CD56dim L2
ENSG00000287510 AL137857.1 1256 sc-eQTL 2.82e-01 0.0846 0.0784 0.668 NK_CD56dim L2
ENSG00000060688 SNRNP40 -563839 sc-eQTL 6.72e-01 0.0426 0.101 0.674 NK_HLA L2
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 1.55e-01 0.127 0.0894 0.674 NK_HLA L2
ENSG00000134644 PUM1 -333042 sc-eQTL 8.17e-01 -0.0202 0.0875 0.674 NK_HLA L2
ENSG00000162511 LAPTM5 -24825 sc-eQTL 1.29e-02 0.206 0.0822 0.674 NK_HLA L2
ENSG00000162517 PEF1 -911947 sc-eQTL 2.28e-01 -0.113 0.0938 0.674 NK_HLA L2
ENSG00000186056 MATN1-AS1 14445 sc-eQTL 8.12e-01 0.0211 0.0889 0.674 NK_HLA L2
ENSG00000287510 AL137857.1 1256 sc-eQTL 9.91e-01 0.000948 0.0859 0.674 NK_HLA L2
ENSG00000060688 SNRNP40 -563839 sc-eQTL 2.39e-01 0.108 0.0911 0.668 NK_cytokine L2
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 5.45e-01 0.0432 0.0713 0.668 NK_cytokine L2
ENSG00000134644 PUM1 -333042 sc-eQTL 2.04e-01 0.0979 0.0769 0.668 NK_cytokine L2
ENSG00000162511 LAPTM5 -24825 sc-eQTL 1.88e-01 0.112 0.0846 0.668 NK_cytokine L2
ENSG00000162517 PEF1 -911947 sc-eQTL 4.18e-01 -0.0587 0.0723 0.668 NK_cytokine L2
ENSG00000186056 MATN1-AS1 14445 sc-eQTL 9.81e-01 0.00214 0.09 0.668 NK_cytokine L2
ENSG00000287510 AL137857.1 1256 sc-eQTL 7.63e-01 0.0253 0.0838 0.668 NK_cytokine L2
ENSG00000060688 SNRNP40 -563839 sc-eQTL 9.40e-01 -0.00795 0.105 0.648 PB L2
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 4.37e-01 0.0944 0.121 0.648 PB L2
ENSG00000134644 PUM1 -333042 sc-eQTL 7.88e-01 0.0284 0.105 0.648 PB L2
ENSG00000162510 MATN1 9364 sc-eQTL 8.02e-01 0.0247 0.0983 0.648 PB L2
ENSG00000162511 LAPTM5 -24825 sc-eQTL 3.52e-01 -0.0654 0.07 0.648 PB L2
ENSG00000162517 PEF1 -911947 sc-eQTL 9.75e-01 0.00335 0.108 0.648 PB L2
ENSG00000186056 MATN1-AS1 14445 sc-eQTL 4.34e-01 0.0753 0.0959 0.648 PB L2
ENSG00000287510 AL137857.1 1256 sc-eQTL 5.53e-01 0.0608 0.102 0.648 PB L2
ENSG00000060688 SNRNP40 -563839 sc-eQTL 1.22e-01 -0.109 0.0701 0.663 Pro_T L2
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 1.87e-01 -0.118 0.0891 0.663 Pro_T L2
ENSG00000134644 PUM1 -333042 sc-eQTL 9.09e-01 0.00958 0.0835 0.663 Pro_T L2
ENSG00000162511 LAPTM5 -24825 sc-eQTL 6.52e-02 0.11 0.0594 0.663 Pro_T L2
ENSG00000162517 PEF1 -911947 sc-eQTL 6.35e-01 -0.0417 0.0878 0.663 Pro_T L2
ENSG00000186056 MATN1-AS1 14445 sc-eQTL 7.81e-01 -0.0233 0.0837 0.663 Pro_T L2
ENSG00000287510 AL137857.1 1256 sc-eQTL 9.22e-01 -0.00755 0.077 0.663 Pro_T L2
ENSG00000060688 SNRNP40 -563839 sc-eQTL 3.49e-01 0.0891 0.0949 0.667 Treg L2
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 7.55e-02 0.163 0.0913 0.667 Treg L2
ENSG00000134644 PUM1 -333042 sc-eQTL 3.67e-01 -0.0664 0.0735 0.667 Treg L2
ENSG00000162511 LAPTM5 -24825 sc-eQTL 7.23e-01 0.03 0.0843 0.667 Treg L2
ENSG00000162517 PEF1 -911947 sc-eQTL 6.38e-02 -0.168 0.0904 0.667 Treg L2
ENSG00000186056 MATN1-AS1 14445 sc-eQTL 1.21e-01 0.133 0.0854 0.667 Treg L2
ENSG00000287510 AL137857.1 1256 sc-eQTL 5.53e-01 -0.051 0.0857 0.667 Treg L2
ENSG00000060688 SNRNP40 -563839 sc-eQTL 3.63e-01 -0.0847 0.0929 0.666 cDC L2
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 4.01e-01 -0.0846 0.101 0.666 cDC L2
ENSG00000134644 PUM1 -333042 sc-eQTL 9.69e-01 -0.00336 0.0866 0.666 cDC L2
ENSG00000162511 LAPTM5 -24825 sc-eQTL 5.02e-01 0.0408 0.0606 0.666 cDC L2
ENSG00000162517 PEF1 -911947 sc-eQTL 5.81e-01 -0.0485 0.0878 0.666 cDC L2
ENSG00000168528 SERINC2 -676616 sc-eQTL 9.91e-01 0.000874 0.0779 0.666 cDC L2
ENSG00000284543 LINC01226 -773277 sc-eQTL 5.43e-02 0.147 0.0758 0.666 cDC L2
ENSG00000287510 AL137857.1 1256 sc-eQTL 1.29e-01 -0.125 0.0819 0.666 cDC L2
ENSG00000060688 SNRNP40 -563839 sc-eQTL 9.47e-01 0.00504 0.0759 0.667 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 7.40e-01 0.0282 0.0846 0.667 cMono_IL1B L2
ENSG00000134644 PUM1 -333042 sc-eQTL 9.70e-01 -0.00213 0.0573 0.667 cMono_IL1B L2
ENSG00000162511 LAPTM5 -24825 sc-eQTL 3.86e-01 0.0436 0.0502 0.667 cMono_IL1B L2
ENSG00000162512 SDC3 -175809 sc-eQTL 7.08e-01 -0.0356 0.0947 0.667 cMono_IL1B L2
ENSG00000162517 PEF1 -911947 sc-eQTL 9.94e-01 -0.000581 0.0774 0.667 cMono_IL1B L2
ENSG00000168528 SERINC2 -676616 sc-eQTL 7.55e-01 0.0299 0.0959 0.667 cMono_IL1B L2
ENSG00000284543 LINC01226 -773277 sc-eQTL 9.83e-01 0.00184 0.0848 0.667 cMono_IL1B L2
ENSG00000287510 AL137857.1 1256 sc-eQTL 1.80e-01 0.106 0.0787 0.667 cMono_IL1B L2
ENSG00000060688 SNRNP40 -563839 sc-eQTL 3.99e-01 0.0669 0.0791 0.667 cMono_S100A L2
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 8.00e-01 0.0238 0.0937 0.667 cMono_S100A L2
ENSG00000134644 PUM1 -333042 sc-eQTL 4.47e-01 0.0515 0.0676 0.667 cMono_S100A L2
ENSG00000162511 LAPTM5 -24825 sc-eQTL 3.08e-01 -0.053 0.0519 0.667 cMono_S100A L2
ENSG00000162512 SDC3 -175809 sc-eQTL 6.71e-01 -0.0382 0.0898 0.667 cMono_S100A L2
ENSG00000162517 PEF1 -911947 sc-eQTL 1.50e-01 -0.117 0.0808 0.667 cMono_S100A L2
ENSG00000168528 SERINC2 -676616 sc-eQTL 9.75e-01 -0.00295 0.0952 0.667 cMono_S100A L2
ENSG00000284543 LINC01226 -773277 sc-eQTL 4.00e-01 -0.0651 0.0772 0.667 cMono_S100A L2
ENSG00000287510 AL137857.1 1256 sc-eQTL 9.26e-01 0.00723 0.0776 0.667 cMono_S100A L2
ENSG00000060688 SNRNP40 -563839 sc-eQTL 9.01e-01 0.0149 0.119 0.661 gdT L2
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 6.00e-01 0.0537 0.102 0.661 gdT L2
ENSG00000134644 PUM1 -333042 sc-eQTL 6.80e-01 0.0434 0.105 0.661 gdT L2
ENSG00000162511 LAPTM5 -24825 sc-eQTL 2.67e-01 0.127 0.114 0.661 gdT L2
ENSG00000162517 PEF1 -911947 sc-eQTL 7.19e-01 0.0377 0.105 0.661 gdT L2
ENSG00000186056 MATN1-AS1 14445 sc-eQTL 9.60e-01 -0.00532 0.106 0.661 gdT L2
ENSG00000287510 AL137857.1 1256 sc-eQTL 8.40e-01 -0.0207 0.102 0.661 gdT L2
ENSG00000060688 SNRNP40 -563839 sc-eQTL 5.22e-01 0.0568 0.0886 0.664 intMono L2
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 5.08e-01 -0.0632 0.0952 0.664 intMono L2
ENSG00000134644 PUM1 -333042 sc-eQTL 1.77e-01 -0.109 0.0805 0.664 intMono L2
ENSG00000162511 LAPTM5 -24825 sc-eQTL 6.30e-04 0.214 0.0616 0.664 intMono L2
ENSG00000162512 SDC3 -175809 sc-eQTL 1.23e-01 -0.134 0.0863 0.664 intMono L2
ENSG00000162517 PEF1 -911947 sc-eQTL 8.72e-01 0.0147 0.0912 0.664 intMono L2
ENSG00000168528 SERINC2 -676616 sc-eQTL 7.54e-01 -0.0285 0.0909 0.664 intMono L2
ENSG00000284543 LINC01226 -773277 sc-eQTL 5.49e-01 0.0516 0.0861 0.664 intMono L2
ENSG00000287510 AL137857.1 1256 sc-eQTL 7.09e-01 0.0322 0.0861 0.664 intMono L2
ENSG00000060688 SNRNP40 -563839 sc-eQTL 4.28e-01 0.0671 0.0844 0.663 ncMono L2
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 6.70e-01 0.0385 0.0901 0.663 ncMono L2
ENSG00000134644 PUM1 -333042 sc-eQTL 5.01e-01 0.0496 0.0736 0.663 ncMono L2
ENSG00000162511 LAPTM5 -24825 sc-eQTL 9.92e-01 0.00065 0.0669 0.663 ncMono L2
ENSG00000162512 SDC3 -175809 sc-eQTL 3.02e-01 -0.0775 0.0748 0.663 ncMono L2
ENSG00000162517 PEF1 -911947 sc-eQTL 6.59e-01 -0.038 0.086 0.663 ncMono L2
ENSG00000168528 SERINC2 -676616 sc-eQTL 7.33e-01 0.028 0.0819 0.663 ncMono L2
ENSG00000284543 LINC01226 -773277 sc-eQTL 6.43e-01 -0.038 0.0818 0.663 ncMono L2
ENSG00000287510 AL137857.1 1256 sc-eQTL 5.76e-01 -0.0474 0.0847 0.663 ncMono L2
ENSG00000060688 SNRNP40 -563839 sc-eQTL 3.31e-01 -0.0887 0.091 0.65 pDC L2
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 7.46e-02 0.178 0.0992 0.65 pDC L2
ENSG00000134644 PUM1 -333042 sc-eQTL 4.86e-01 -0.0579 0.083 0.65 pDC L2
ENSG00000162511 LAPTM5 -24825 sc-eQTL 8.05e-01 0.0191 0.0772 0.65 pDC L2
ENSG00000162517 PEF1 -911947 sc-eQTL 7.01e-01 -0.0385 0.1 0.65 pDC L2
ENSG00000168528 SERINC2 -676616 sc-eQTL 9.23e-01 -0.0091 0.0937 0.65 pDC L2
ENSG00000284543 LINC01226 -773277 sc-eQTL 6.30e-01 -0.0351 0.0727 0.65 pDC L2
ENSG00000287510 AL137857.1 1256 sc-eQTL 7.91e-01 -0.0227 0.0855 0.65 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -563839 sc-eQTL 7.25e-01 -0.0329 0.0936 0.667 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 6.35e-01 0.037 0.0779 0.667 B_Memory LOneK1K
ENSG00000134644 PUM1 -333042 sc-eQTL 4.44e-01 0.0529 0.069 0.667 B_Memory LOneK1K
ENSG00000162510 MATN1 9364 sc-eQTL 2.14e-01 0.0977 0.0784 0.667 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -24825 sc-eQTL 1.63e-01 0.069 0.0492 0.667 B_Memory LOneK1K
ENSG00000162517 PEF1 -911947 sc-eQTL 2.95e-01 0.0857 0.0817 0.667 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 14445 sc-eQTL 5.32e-01 0.0409 0.0654 0.667 B_Memory LOneK1K
ENSG00000287510 AL137857.1 1256 sc-eQTL 4.30e-01 -0.0563 0.0712 0.667 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -563839 sc-eQTL 4.08e-02 -0.174 0.0844 0.667 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 1.21e-02 -0.168 0.0664 0.667 B_Naive LOneK1K
ENSG00000134644 PUM1 -333042 sc-eQTL 6.84e-01 -0.026 0.0637 0.667 B_Naive LOneK1K
ENSG00000162510 MATN1 9364 sc-eQTL 2.05e-02 -0.142 0.0606 0.667 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -24825 sc-eQTL 1.60e-01 0.0607 0.043 0.667 B_Naive LOneK1K
ENSG00000162517 PEF1 -911947 sc-eQTL 3.96e-01 0.0671 0.0788 0.667 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 14445 sc-eQTL 3.16e-01 -0.056 0.0557 0.667 B_Naive LOneK1K
ENSG00000287510 AL137857.1 1256 sc-eQTL 1.53e-01 0.0947 0.066 0.667 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -563839 sc-eQTL 7.78e-01 0.0203 0.0719 0.667 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 7.41e-01 0.027 0.0815 0.667 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -333042 sc-eQTL 4.26e-01 0.0414 0.0519 0.667 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -24825 sc-eQTL 8.03e-01 0.0114 0.0457 0.667 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -175809 sc-eQTL 5.91e-01 -0.0501 0.0931 0.667 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -911947 sc-eQTL 3.89e-01 -0.0565 0.0654 0.667 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -676616 sc-eQTL 8.83e-01 0.0141 0.0959 0.667 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -773277 sc-eQTL 5.23e-01 -0.0503 0.0785 0.667 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 1256 sc-eQTL 2.63e-01 0.0824 0.0734 0.667 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -563839 sc-eQTL 1.66e-01 0.112 0.0802 0.668 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 8.35e-01 -0.0184 0.0882 0.668 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -333042 sc-eQTL 7.91e-01 -0.0191 0.0723 0.668 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -24825 sc-eQTL 5.57e-02 0.11 0.0573 0.668 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -175809 sc-eQTL 2.86e-02 -0.184 0.0835 0.668 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -911947 sc-eQTL 3.48e-01 -0.072 0.0766 0.668 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -676616 sc-eQTL 8.51e-01 -0.0164 0.0876 0.668 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -773277 sc-eQTL 7.68e-01 -0.0246 0.0831 0.668 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 1256 sc-eQTL 9.05e-01 -0.00994 0.0832 0.668 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -563839 sc-eQTL 2.60e-01 0.101 0.0892 0.668 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -564033 sc-eQTL 8.30e-01 0.0132 0.0611 0.668 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -333042 sc-eQTL 5.77e-01 0.0374 0.0669 0.668 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -24825 sc-eQTL 2.17e-01 0.0922 0.0745 0.668 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -911947 sc-eQTL 8.27e-01 -0.0125 0.0568 0.668 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 14445 sc-eQTL 5.05e-01 -0.0575 0.0862 0.668 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 1256 sc-eQTL 3.65e-01 0.0674 0.0743 0.668 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162511 \N -24825 0.000127 2.7e-05 2.96e-06 1.21e-05 3.05e-06 2.05e-05 3.03e-05 2.25e-06 1.72e-05 6.99e-06 2.13e-05 8.05e-06 3.56e-05 9.51e-06 5.5e-06 1.15e-05 1.08e-05 2.16e-05 5.17e-06 3.76e-06 1.05e-05 1.76e-05 2.49e-05 6.86e-06 2.93e-05 5.36e-06 8.03e-06 7.8e-06 2.5e-05 1.88e-05 1.12e-05 1.14e-06 1.61e-06 3.8e-06 6.46e-06 3.58e-06 1.85e-06 1.9e-06 2.25e-06 2.17e-06 1e-06 4.6e-05 1.05e-05 1.68e-07 2.26e-06 2.15e-06 3.02e-06 6.59e-07 1.04e-06