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Genes within 1Mb (chr1:30729133:A:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -567655 sc-eQTL 4.48e-01 0.0607 0.0798 0.35 B L1
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 4.36e-01 -0.0498 0.0639 0.35 B L1
ENSG00000134644 PUM1 -336858 sc-eQTL 4.18e-01 0.0434 0.0536 0.35 B L1
ENSG00000162510 MATN1 5548 sc-eQTL 7.34e-03 -0.15 0.0555 0.35 B L1
ENSG00000162511 LAPTM5 -28641 sc-eQTL 3.96e-01 0.0375 0.0441 0.35 B L1
ENSG00000162517 PEF1 -915763 sc-eQTL 5.52e-01 -0.0397 0.0666 0.35 B L1
ENSG00000186056 MATN1-AS1 10629 sc-eQTL 8.08e-01 -0.0126 0.0518 0.35 B L1
ENSG00000287510 AL137857.1 -2560 sc-eQTL 3.65e-01 0.0555 0.0612 0.35 B L1
ENSG00000060688 SNRNP40 -567655 sc-eQTL 5.67e-01 -0.0393 0.0686 0.35 CD4T L1
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 8.24e-01 0.0119 0.0536 0.35 CD4T L1
ENSG00000134644 PUM1 -336858 sc-eQTL 8.85e-01 -0.00689 0.0477 0.35 CD4T L1
ENSG00000162511 LAPTM5 -28641 sc-eQTL 5.73e-02 0.1 0.0525 0.35 CD4T L1
ENSG00000162517 PEF1 -915763 sc-eQTL 5.06e-01 0.0368 0.0553 0.35 CD4T L1
ENSG00000186056 MATN1-AS1 10629 sc-eQTL 2.16e-01 0.0585 0.0472 0.35 CD4T L1
ENSG00000287510 AL137857.1 -2560 sc-eQTL 5.48e-02 -0.109 0.0562 0.35 CD4T L1
ENSG00000060688 SNRNP40 -567655 sc-eQTL 9.22e-01 -0.00893 0.0906 0.35 CD8T L1
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 6.44e-01 -0.0279 0.0603 0.35 CD8T L1
ENSG00000134644 PUM1 -336858 sc-eQTL 7.72e-01 0.0154 0.0531 0.35 CD8T L1
ENSG00000162511 LAPTM5 -28641 sc-eQTL 5.11e-01 0.0339 0.0515 0.35 CD8T L1
ENSG00000162517 PEF1 -915763 sc-eQTL 8.12e-01 0.0152 0.0635 0.35 CD8T L1
ENSG00000186056 MATN1-AS1 10629 sc-eQTL 4.64e-01 0.0442 0.0604 0.35 CD8T L1
ENSG00000287510 AL137857.1 -2560 sc-eQTL 3.80e-01 -0.0668 0.0758 0.35 CD8T L1
ENSG00000060688 SNRNP40 -567655 sc-eQTL 6.82e-01 -0.0331 0.0806 0.358 DC L1
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 5.44e-01 -0.058 0.0954 0.358 DC L1
ENSG00000134644 PUM1 -336858 sc-eQTL 3.97e-01 0.0634 0.0747 0.358 DC L1
ENSG00000162511 LAPTM5 -28641 sc-eQTL 1.23e-01 0.0822 0.0531 0.358 DC L1
ENSG00000162517 PEF1 -915763 sc-eQTL 8.50e-01 0.0164 0.0866 0.358 DC L1
ENSG00000168528 SERINC2 -680432 sc-eQTL 8.34e-01 0.0185 0.0881 0.358 DC L1
ENSG00000284543 LINC01226 -777093 sc-eQTL 7.06e-01 0.0221 0.0583 0.358 DC L1
ENSG00000287510 AL137857.1 -2560 sc-eQTL 5.55e-01 -0.0499 0.0844 0.358 DC L1
ENSG00000060688 SNRNP40 -567655 sc-eQTL 1.26e-01 0.0952 0.062 0.35 Mono L1
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 4.66e-01 -0.0564 0.0771 0.35 Mono L1
ENSG00000134644 PUM1 -336858 sc-eQTL 2.19e-01 0.0608 0.0493 0.35 Mono L1
ENSG00000162511 LAPTM5 -28641 sc-eQTL 4.67e-01 -0.0332 0.0455 0.35 Mono L1
ENSG00000162512 SDC3 -179625 sc-eQTL 3.83e-01 -0.0764 0.0874 0.35 Mono L1
ENSG00000162517 PEF1 -915763 sc-eQTL 2.90e-01 -0.065 0.0613 0.35 Mono L1
ENSG00000168528 SERINC2 -680432 sc-eQTL 5.50e-01 -0.0562 0.0939 0.35 Mono L1
ENSG00000284543 LINC01226 -777093 sc-eQTL 5.41e-01 -0.0507 0.0827 0.35 Mono L1
ENSG00000287510 AL137857.1 -2560 sc-eQTL 8.29e-01 -0.0157 0.0723 0.35 Mono L1
ENSG00000060688 SNRNP40 -567655 sc-eQTL 1.20e-02 0.217 0.0855 0.35 NK L1
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 1.30e-01 -0.0899 0.0591 0.35 NK L1
ENSG00000134644 PUM1 -336858 sc-eQTL 3.80e-01 0.0548 0.0622 0.35 NK L1
ENSG00000162511 LAPTM5 -28641 sc-eQTL 4.04e-01 0.0599 0.0716 0.35 NK L1
ENSG00000162517 PEF1 -915763 sc-eQTL 5.32e-01 0.0328 0.0523 0.35 NK L1
ENSG00000186056 MATN1-AS1 10629 sc-eQTL 7.07e-01 0.0303 0.0806 0.35 NK L1
ENSG00000287510 AL137857.1 -2560 sc-eQTL 5.04e-01 0.0497 0.0744 0.35 NK L1
ENSG00000060688 SNRNP40 -567655 sc-eQTL 1.91e-01 0.0849 0.0647 0.35 Other_T L1
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 4.71e-01 -0.0501 0.0693 0.35 Other_T L1
ENSG00000134644 PUM1 -336858 sc-eQTL 1.14e-02 -0.157 0.0615 0.35 Other_T L1
ENSG00000162511 LAPTM5 -28641 sc-eQTL 6.55e-02 0.0939 0.0507 0.35 Other_T L1
ENSG00000162517 PEF1 -915763 sc-eQTL 8.98e-01 0.00876 0.0683 0.35 Other_T L1
ENSG00000186056 MATN1-AS1 10629 sc-eQTL 2.99e-01 0.0871 0.0836 0.35 Other_T L1
ENSG00000287510 AL137857.1 -2560 sc-eQTL 1.17e-01 -0.136 0.0867 0.35 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -567655 sc-eQTL 1.93e-01 0.133 0.102 0.36 B_Activated L2
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 2.66e-01 0.115 0.103 0.36 B_Activated L2
ENSG00000134644 PUM1 -336858 sc-eQTL 8.92e-01 0.0131 0.096 0.36 B_Activated L2
ENSG00000162510 MATN1 5548 sc-eQTL 3.01e-01 -0.0868 0.0836 0.36 B_Activated L2
ENSG00000162511 LAPTM5 -28641 sc-eQTL 8.08e-01 0.0143 0.0585 0.36 B_Activated L2
ENSG00000162517 PEF1 -915763 sc-eQTL 6.30e-01 0.048 0.0995 0.36 B_Activated L2
ENSG00000186056 MATN1-AS1 10629 sc-eQTL 3.32e-01 0.0917 0.0942 0.36 B_Activated L2
ENSG00000287510 AL137857.1 -2560 sc-eQTL 1.72e-01 -0.114 0.0831 0.36 B_Activated L2
ENSG00000060688 SNRNP40 -567655 sc-eQTL 9.54e-01 0.00572 0.0984 0.35 B_Intermediate L2
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 8.06e-01 0.0202 0.082 0.35 B_Intermediate L2
ENSG00000134644 PUM1 -336858 sc-eQTL 3.57e-01 0.0713 0.0772 0.35 B_Intermediate L2
ENSG00000162510 MATN1 5548 sc-eQTL 5.36e-01 0.0498 0.0804 0.35 B_Intermediate L2
ENSG00000162511 LAPTM5 -28641 sc-eQTL 3.22e-01 0.0489 0.0493 0.35 B_Intermediate L2
ENSG00000162517 PEF1 -915763 sc-eQTL 1.78e-01 -0.124 0.0913 0.35 B_Intermediate L2
ENSG00000186056 MATN1-AS1 10629 sc-eQTL 4.35e-01 0.0541 0.0692 0.35 B_Intermediate L2
ENSG00000287510 AL137857.1 -2560 sc-eQTL 4.57e-01 0.0578 0.0775 0.35 B_Intermediate L2
ENSG00000060688 SNRNP40 -567655 sc-eQTL 1.07e-01 0.154 0.095 0.351 B_Memory L2
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 4.77e-01 -0.0626 0.0879 0.351 B_Memory L2
ENSG00000134644 PUM1 -336858 sc-eQTL 9.89e-01 -0.00102 0.0766 0.351 B_Memory L2
ENSG00000162510 MATN1 5548 sc-eQTL 2.82e-01 -0.0789 0.0731 0.351 B_Memory L2
ENSG00000162511 LAPTM5 -28641 sc-eQTL 8.85e-01 0.00939 0.065 0.351 B_Memory L2
ENSG00000162517 PEF1 -915763 sc-eQTL 9.62e-01 0.00409 0.0868 0.351 B_Memory L2
ENSG00000186056 MATN1-AS1 10629 sc-eQTL 9.82e-01 -0.00171 0.0744 0.351 B_Memory L2
ENSG00000287510 AL137857.1 -2560 sc-eQTL 7.36e-01 -0.0294 0.0871 0.351 B_Memory L2
ENSG00000060688 SNRNP40 -567655 sc-eQTL 2.23e-01 0.106 0.0868 0.35 B_Naive1 L2
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 2.58e-01 0.0851 0.075 0.35 B_Naive1 L2
ENSG00000134644 PUM1 -336858 sc-eQTL 4.59e-01 0.0492 0.0662 0.35 B_Naive1 L2
ENSG00000162510 MATN1 5548 sc-eQTL 2.83e-03 -0.199 0.0659 0.35 B_Naive1 L2
ENSG00000162511 LAPTM5 -28641 sc-eQTL 5.12e-01 0.0295 0.0449 0.35 B_Naive1 L2
ENSG00000162517 PEF1 -915763 sc-eQTL 9.48e-01 -0.00516 0.0792 0.35 B_Naive1 L2
ENSG00000186056 MATN1-AS1 10629 sc-eQTL 6.88e-01 -0.0238 0.059 0.35 B_Naive1 L2
ENSG00000287510 AL137857.1 -2560 sc-eQTL 2.19e-02 0.166 0.072 0.35 B_Naive1 L2
ENSG00000060688 SNRNP40 -567655 sc-eQTL 4.11e-01 -0.0762 0.0925 0.35 B_Naive2 L2
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 1.08e-04 -0.291 0.0738 0.35 B_Naive2 L2
ENSG00000134644 PUM1 -336858 sc-eQTL 8.08e-01 -0.0182 0.0748 0.35 B_Naive2 L2
ENSG00000162510 MATN1 5548 sc-eQTL 4.52e-02 -0.143 0.0712 0.35 B_Naive2 L2
ENSG00000162511 LAPTM5 -28641 sc-eQTL 8.71e-01 0.00793 0.0488 0.35 B_Naive2 L2
ENSG00000162517 PEF1 -915763 sc-eQTL 6.63e-01 -0.0388 0.0887 0.35 B_Naive2 L2
ENSG00000186056 MATN1-AS1 10629 sc-eQTL 4.97e-01 0.0483 0.071 0.35 B_Naive2 L2
ENSG00000287510 AL137857.1 -2560 sc-eQTL 1.68e-01 -0.106 0.0764 0.35 B_Naive2 L2
ENSG00000060688 SNRNP40 -567655 sc-eQTL 3.63e-01 -0.0826 0.0905 0.35 CD4_CTL L2
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 9.51e-01 -0.00549 0.0892 0.35 CD4_CTL L2
ENSG00000134644 PUM1 -336858 sc-eQTL 3.75e-01 0.0776 0.0873 0.35 CD4_CTL L2
ENSG00000162511 LAPTM5 -28641 sc-eQTL 4.59e-01 -0.0578 0.0779 0.35 CD4_CTL L2
ENSG00000162517 PEF1 -915763 sc-eQTL 5.89e-01 -0.0433 0.0799 0.35 CD4_CTL L2
ENSG00000186056 MATN1-AS1 10629 sc-eQTL 3.29e-01 0.0833 0.0851 0.35 CD4_CTL L2
ENSG00000287510 AL137857.1 -2560 sc-eQTL 1.19e-01 -0.117 0.0748 0.35 CD4_CTL L2
ENSG00000060688 SNRNP40 -567655 sc-eQTL 2.96e-01 -0.0752 0.0718 0.35 CD4_Naive L2
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 9.14e-01 0.00691 0.0638 0.35 CD4_Naive L2
ENSG00000134644 PUM1 -336858 sc-eQTL 6.79e-01 -0.0211 0.0509 0.35 CD4_Naive L2
ENSG00000162511 LAPTM5 -28641 sc-eQTL 6.05e-02 0.102 0.0541 0.35 CD4_Naive L2
ENSG00000162517 PEF1 -915763 sc-eQTL 8.57e-01 0.0108 0.0599 0.35 CD4_Naive L2
ENSG00000186056 MATN1-AS1 10629 sc-eQTL 8.28e-01 0.0121 0.0554 0.35 CD4_Naive L2
ENSG00000287510 AL137857.1 -2560 sc-eQTL 9.02e-01 0.00786 0.0636 0.35 CD4_Naive L2
ENSG00000060688 SNRNP40 -567655 sc-eQTL 8.13e-01 0.0213 0.0898 0.35 CD4_TCM L2
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 7.41e-01 0.0239 0.0724 0.35 CD4_TCM L2
ENSG00000134644 PUM1 -336858 sc-eQTL 7.25e-01 0.0226 0.0641 0.35 CD4_TCM L2
ENSG00000162511 LAPTM5 -28641 sc-eQTL 9.40e-03 0.137 0.0524 0.35 CD4_TCM L2
ENSG00000162517 PEF1 -915763 sc-eQTL 4.24e-01 0.057 0.0712 0.35 CD4_TCM L2
ENSG00000186056 MATN1-AS1 10629 sc-eQTL 1.69e-01 0.0928 0.0672 0.35 CD4_TCM L2
ENSG00000287510 AL137857.1 -2560 sc-eQTL 6.27e-02 -0.14 0.0746 0.35 CD4_TCM L2
ENSG00000060688 SNRNP40 -567655 sc-eQTL 7.97e-01 0.0232 0.09 0.35 CD4_TEM L2
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 7.07e-01 -0.0323 0.0858 0.35 CD4_TEM L2
ENSG00000134644 PUM1 -336858 sc-eQTL 3.88e-01 0.0616 0.0713 0.35 CD4_TEM L2
ENSG00000162511 LAPTM5 -28641 sc-eQTL 1.58e-01 0.102 0.0719 0.35 CD4_TEM L2
ENSG00000162517 PEF1 -915763 sc-eQTL 6.70e-01 0.0346 0.0809 0.35 CD4_TEM L2
ENSG00000186056 MATN1-AS1 10629 sc-eQTL 7.27e-01 0.0295 0.0845 0.35 CD4_TEM L2
ENSG00000287510 AL137857.1 -2560 sc-eQTL 3.09e-01 -0.0847 0.0831 0.35 CD4_TEM L2
ENSG00000060688 SNRNP40 -567655 sc-eQTL 4.02e-01 -0.082 0.0976 0.35 CD8_CTL L2
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 4.58e-02 -0.149 0.0743 0.35 CD8_CTL L2
ENSG00000134644 PUM1 -336858 sc-eQTL 6.34e-02 0.135 0.0722 0.35 CD8_CTL L2
ENSG00000162511 LAPTM5 -28641 sc-eQTL 6.81e-01 -0.0332 0.0806 0.35 CD8_CTL L2
ENSG00000162517 PEF1 -915763 sc-eQTL 5.72e-01 -0.0397 0.0702 0.35 CD8_CTL L2
ENSG00000186056 MATN1-AS1 10629 sc-eQTL 9.00e-01 0.0107 0.0848 0.35 CD8_CTL L2
ENSG00000287510 AL137857.1 -2560 sc-eQTL 5.13e-01 -0.0522 0.0796 0.35 CD8_CTL L2
ENSG00000060688 SNRNP40 -567655 sc-eQTL 4.66e-01 0.0658 0.0901 0.35 CD8_Naive L2
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 4.09e-01 0.0642 0.0777 0.35 CD8_Naive L2
ENSG00000134644 PUM1 -336858 sc-eQTL 6.44e-01 -0.029 0.0626 0.35 CD8_Naive L2
ENSG00000162511 LAPTM5 -28641 sc-eQTL 5.09e-02 0.117 0.0595 0.35 CD8_Naive L2
ENSG00000162517 PEF1 -915763 sc-eQTL 6.27e-01 0.0406 0.0834 0.35 CD8_Naive L2
ENSG00000186056 MATN1-AS1 10629 sc-eQTL 2.33e-01 0.0892 0.0747 0.35 CD8_Naive L2
ENSG00000287510 AL137857.1 -2560 sc-eQTL 9.34e-01 0.00672 0.0816 0.35 CD8_Naive L2
ENSG00000060688 SNRNP40 -567655 sc-eQTL 7.30e-01 -0.035 0.101 0.35 CD8_TCM L2
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 5.36e-01 0.0574 0.0927 0.35 CD8_TCM L2
ENSG00000134644 PUM1 -336858 sc-eQTL 9.82e-01 -0.00194 0.0872 0.35 CD8_TCM L2
ENSG00000162511 LAPTM5 -28641 sc-eQTL 7.73e-01 0.0264 0.0913 0.35 CD8_TCM L2
ENSG00000162517 PEF1 -915763 sc-eQTL 8.89e-01 -0.013 0.0933 0.35 CD8_TCM L2
ENSG00000186056 MATN1-AS1 10629 sc-eQTL 7.70e-01 0.0247 0.0845 0.35 CD8_TCM L2
ENSG00000287510 AL137857.1 -2560 sc-eQTL 6.29e-01 0.0413 0.0854 0.35 CD8_TCM L2
ENSG00000060688 SNRNP40 -567655 sc-eQTL 2.65e-01 0.107 0.0958 0.345 CD8_TEM L2
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 4.99e-01 0.0623 0.0921 0.345 CD8_TEM L2
ENSG00000134644 PUM1 -336858 sc-eQTL 5.78e-01 -0.0525 0.0942 0.345 CD8_TEM L2
ENSG00000162511 LAPTM5 -28641 sc-eQTL 4.85e-01 -0.0619 0.0885 0.345 CD8_TEM L2
ENSG00000162517 PEF1 -915763 sc-eQTL 8.50e-01 0.0158 0.0834 0.345 CD8_TEM L2
ENSG00000186056 MATN1-AS1 10629 sc-eQTL 5.27e-02 -0.178 0.0911 0.345 CD8_TEM L2
ENSG00000287510 AL137857.1 -2560 sc-eQTL 7.79e-01 -0.0234 0.0832 0.345 CD8_TEM L2
ENSG00000060688 SNRNP40 -567655 sc-eQTL 1.58e-01 0.134 0.0943 0.351 MAIT L2
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 3.33e-01 0.0813 0.0838 0.351 MAIT L2
ENSG00000134644 PUM1 -336858 sc-eQTL 1.69e-01 -0.111 0.0802 0.351 MAIT L2
ENSG00000162511 LAPTM5 -28641 sc-eQTL 9.37e-02 0.127 0.0754 0.351 MAIT L2
ENSG00000162517 PEF1 -915763 sc-eQTL 6.40e-01 0.0391 0.0834 0.351 MAIT L2
ENSG00000186056 MATN1-AS1 10629 sc-eQTL 3.99e-01 0.0714 0.0844 0.351 MAIT L2
ENSG00000287510 AL137857.1 -2560 sc-eQTL 9.60e-02 -0.145 0.0866 0.351 MAIT L2
ENSG00000060688 SNRNP40 -567655 sc-eQTL 1.50e-01 0.141 0.0977 0.356 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 4.60e-02 -0.165 0.0822 0.356 NK_CD56bright L2
ENSG00000134644 PUM1 -336858 sc-eQTL 6.59e-01 0.0385 0.0871 0.356 NK_CD56bright L2
ENSG00000162511 LAPTM5 -28641 sc-eQTL 1.18e-01 0.134 0.0854 0.356 NK_CD56bright L2
ENSG00000162517 PEF1 -915763 sc-eQTL 4.48e-01 -0.0634 0.0834 0.356 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 10629 sc-eQTL 2.46e-01 -0.1 0.0861 0.356 NK_CD56bright L2
ENSG00000287510 AL137857.1 -2560 sc-eQTL 2.10e-01 0.107 0.0848 0.356 NK_CD56bright L2
ENSG00000060688 SNRNP40 -567655 sc-eQTL 2.97e-01 0.0962 0.092 0.351 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 7.19e-02 -0.122 0.0677 0.351 NK_CD56dim L2
ENSG00000134644 PUM1 -336858 sc-eQTL 5.24e-01 0.0446 0.0699 0.351 NK_CD56dim L2
ENSG00000162511 LAPTM5 -28641 sc-eQTL 7.57e-01 0.0231 0.0746 0.351 NK_CD56dim L2
ENSG00000162517 PEF1 -915763 sc-eQTL 9.00e-01 0.00837 0.0664 0.351 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 10629 sc-eQTL 3.38e-01 0.0896 0.0933 0.351 NK_CD56dim L2
ENSG00000287510 AL137857.1 -2560 sc-eQTL 5.69e-01 0.0439 0.077 0.351 NK_CD56dim L2
ENSG00000060688 SNRNP40 -567655 sc-eQTL 8.73e-01 0.016 0.0999 0.356 NK_HLA L2
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 1.54e-01 0.127 0.0888 0.356 NK_HLA L2
ENSG00000134644 PUM1 -336858 sc-eQTL 9.94e-01 -0.000704 0.087 0.356 NK_HLA L2
ENSG00000162511 LAPTM5 -28641 sc-eQTL 6.66e-01 0.0359 0.0829 0.356 NK_HLA L2
ENSG00000162517 PEF1 -915763 sc-eQTL 6.04e-01 -0.0486 0.0934 0.356 NK_HLA L2
ENSG00000186056 MATN1-AS1 10629 sc-eQTL 9.92e-01 0.000854 0.0883 0.356 NK_HLA L2
ENSG00000287510 AL137857.1 -2560 sc-eQTL 3.26e-01 0.0839 0.0852 0.356 NK_HLA L2
ENSG00000060688 SNRNP40 -567655 sc-eQTL 8.14e-02 0.157 0.0899 0.351 NK_cytokine L2
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 5.37e-01 -0.0437 0.0706 0.351 NK_cytokine L2
ENSG00000134644 PUM1 -336858 sc-eQTL 2.52e-01 0.0875 0.0762 0.351 NK_cytokine L2
ENSG00000162511 LAPTM5 -28641 sc-eQTL 8.81e-01 0.0126 0.0841 0.351 NK_cytokine L2
ENSG00000162517 PEF1 -915763 sc-eQTL 4.10e-01 0.0591 0.0716 0.351 NK_cytokine L2
ENSG00000186056 MATN1-AS1 10629 sc-eQTL 5.79e-01 0.0495 0.0891 0.351 NK_cytokine L2
ENSG00000287510 AL137857.1 -2560 sc-eQTL 6.74e-01 0.0349 0.0829 0.351 NK_cytokine L2
ENSG00000060688 SNRNP40 -567655 sc-eQTL 1.32e-01 0.166 0.11 0.344 PB L2
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 6.49e-01 -0.0586 0.128 0.344 PB L2
ENSG00000134644 PUM1 -336858 sc-eQTL 3.09e-01 -0.113 0.111 0.344 PB L2
ENSG00000162510 MATN1 5548 sc-eQTL 7.08e-01 0.039 0.104 0.344 PB L2
ENSG00000162511 LAPTM5 -28641 sc-eQTL 7.88e-01 0.02 0.0742 0.344 PB L2
ENSG00000162517 PEF1 -915763 sc-eQTL 5.73e-01 -0.0645 0.114 0.344 PB L2
ENSG00000186056 MATN1-AS1 10629 sc-eQTL 2.11e-01 0.127 0.101 0.344 PB L2
ENSG00000287510 AL137857.1 -2560 sc-eQTL 3.37e-01 -0.104 0.108 0.344 PB L2
ENSG00000060688 SNRNP40 -567655 sc-eQTL 5.47e-01 -0.0423 0.0701 0.348 Pro_T L2
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 6.14e-02 -0.166 0.0884 0.348 Pro_T L2
ENSG00000134644 PUM1 -336858 sc-eQTL 1.62e-01 -0.116 0.0827 0.348 Pro_T L2
ENSG00000162511 LAPTM5 -28641 sc-eQTL 9.85e-01 0.00116 0.0596 0.348 Pro_T L2
ENSG00000162517 PEF1 -915763 sc-eQTL 5.86e-01 -0.0477 0.0874 0.348 Pro_T L2
ENSG00000186056 MATN1-AS1 10629 sc-eQTL 5.37e-01 -0.0515 0.0833 0.348 Pro_T L2
ENSG00000287510 AL137857.1 -2560 sc-eQTL 2.14e-01 -0.0952 0.0764 0.348 Pro_T L2
ENSG00000060688 SNRNP40 -567655 sc-eQTL 2.29e-01 0.111 0.0924 0.35 Treg L2
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 5.71e-01 0.0508 0.0896 0.35 Treg L2
ENSG00000134644 PUM1 -336858 sc-eQTL 9.52e-01 -0.00429 0.0718 0.35 Treg L2
ENSG00000162511 LAPTM5 -28641 sc-eQTL 3.70e-01 0.0737 0.082 0.35 Treg L2
ENSG00000162517 PEF1 -915763 sc-eQTL 4.43e-01 0.0681 0.0886 0.35 Treg L2
ENSG00000186056 MATN1-AS1 10629 sc-eQTL 1.71e-01 0.114 0.0834 0.35 Treg L2
ENSG00000287510 AL137857.1 -2560 sc-eQTL 5.35e-01 -0.0519 0.0836 0.35 Treg L2
ENSG00000060688 SNRNP40 -567655 sc-eQTL 8.75e-01 -0.0144 0.0912 0.363 cDC L2
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 9.76e-01 0.00292 0.0987 0.363 cDC L2
ENSG00000134644 PUM1 -336858 sc-eQTL 6.32e-01 0.0406 0.0848 0.363 cDC L2
ENSG00000162511 LAPTM5 -28641 sc-eQTL 1.54e-01 0.0847 0.0591 0.363 cDC L2
ENSG00000162517 PEF1 -915763 sc-eQTL 4.37e-01 0.067 0.086 0.363 cDC L2
ENSG00000168528 SERINC2 -680432 sc-eQTL 2.70e-01 -0.0843 0.0761 0.363 cDC L2
ENSG00000284543 LINC01226 -777093 sc-eQTL 8.79e-03 0.195 0.0736 0.363 cDC L2
ENSG00000287510 AL137857.1 -2560 sc-eQTL 4.97e-01 -0.0549 0.0806 0.363 cDC L2
ENSG00000060688 SNRNP40 -567655 sc-eQTL 1.33e-01 0.113 0.075 0.35 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 4.11e-01 -0.0692 0.0839 0.35 cMono_IL1B L2
ENSG00000134644 PUM1 -336858 sc-eQTL 3.82e-01 0.0498 0.0568 0.35 cMono_IL1B L2
ENSG00000162511 LAPTM5 -28641 sc-eQTL 3.98e-01 -0.0422 0.0499 0.35 cMono_IL1B L2
ENSG00000162512 SDC3 -179625 sc-eQTL 2.81e-01 -0.101 0.0938 0.35 cMono_IL1B L2
ENSG00000162517 PEF1 -915763 sc-eQTL 5.78e-01 -0.0428 0.0768 0.35 cMono_IL1B L2
ENSG00000168528 SERINC2 -680432 sc-eQTL 7.61e-01 -0.029 0.0952 0.35 cMono_IL1B L2
ENSG00000284543 LINC01226 -777093 sc-eQTL 3.80e-01 -0.0739 0.084 0.35 cMono_IL1B L2
ENSG00000287510 AL137857.1 -2560 sc-eQTL 4.64e-01 -0.0576 0.0784 0.35 cMono_IL1B L2
ENSG00000060688 SNRNP40 -567655 sc-eQTL 2.78e-01 0.0858 0.0789 0.35 cMono_S100A L2
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 6.07e-01 0.0481 0.0935 0.35 cMono_S100A L2
ENSG00000134644 PUM1 -336858 sc-eQTL 7.22e-01 0.0241 0.0676 0.35 cMono_S100A L2
ENSG00000162511 LAPTM5 -28641 sc-eQTL 8.69e-01 -0.0086 0.0519 0.35 cMono_S100A L2
ENSG00000162512 SDC3 -179625 sc-eQTL 1.24e-01 0.138 0.0892 0.35 cMono_S100A L2
ENSG00000162517 PEF1 -915763 sc-eQTL 2.18e-01 -0.0997 0.0807 0.35 cMono_S100A L2
ENSG00000168528 SERINC2 -680432 sc-eQTL 8.18e-01 -0.0219 0.095 0.35 cMono_S100A L2
ENSG00000284543 LINC01226 -777093 sc-eQTL 4.83e-01 -0.0542 0.0771 0.35 cMono_S100A L2
ENSG00000287510 AL137857.1 -2560 sc-eQTL 9.40e-01 -0.00581 0.0775 0.35 cMono_S100A L2
ENSG00000060688 SNRNP40 -567655 sc-eQTL 6.53e-01 -0.0526 0.117 0.342 gdT L2
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 8.08e-01 0.0244 0.1 0.342 gdT L2
ENSG00000134644 PUM1 -336858 sc-eQTL 8.27e-01 0.0227 0.104 0.342 gdT L2
ENSG00000162511 LAPTM5 -28641 sc-eQTL 5.92e-01 -0.0605 0.112 0.342 gdT L2
ENSG00000162517 PEF1 -915763 sc-eQTL 7.27e-01 0.036 0.103 0.342 gdT L2
ENSG00000186056 MATN1-AS1 10629 sc-eQTL 5.45e-01 0.0629 0.104 0.342 gdT L2
ENSG00000287510 AL137857.1 -2560 sc-eQTL 3.09e-01 -0.102 0.1 0.342 gdT L2
ENSG00000060688 SNRNP40 -567655 sc-eQTL 3.01e-01 0.0919 0.0886 0.353 intMono L2
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 3.69e-01 -0.0858 0.0953 0.353 intMono L2
ENSG00000134644 PUM1 -336858 sc-eQTL 5.19e-01 0.0523 0.081 0.353 intMono L2
ENSG00000162511 LAPTM5 -28641 sc-eQTL 7.14e-01 0.0233 0.0636 0.353 intMono L2
ENSG00000162512 SDC3 -179625 sc-eQTL 3.32e-01 -0.0845 0.0869 0.353 intMono L2
ENSG00000162517 PEF1 -915763 sc-eQTL 8.91e-01 0.0126 0.0915 0.353 intMono L2
ENSG00000168528 SERINC2 -680432 sc-eQTL 7.97e-02 -0.159 0.0904 0.353 intMono L2
ENSG00000284543 LINC01226 -777093 sc-eQTL 6.88e-01 -0.0347 0.0863 0.353 intMono L2
ENSG00000287510 AL137857.1 -2560 sc-eQTL 8.24e-01 -0.0192 0.0864 0.353 intMono L2
ENSG00000060688 SNRNP40 -567655 sc-eQTL 1.82e-01 0.11 0.0824 0.355 ncMono L2
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 7.73e-01 0.0255 0.0882 0.355 ncMono L2
ENSG00000134644 PUM1 -336858 sc-eQTL 1.66e-01 0.0997 0.0717 0.355 ncMono L2
ENSG00000162511 LAPTM5 -28641 sc-eQTL 4.67e-01 0.0476 0.0654 0.355 ncMono L2
ENSG00000162512 SDC3 -179625 sc-eQTL 2.49e-01 -0.0845 0.0732 0.355 ncMono L2
ENSG00000162517 PEF1 -915763 sc-eQTL 1.58e-01 0.119 0.0838 0.355 ncMono L2
ENSG00000168528 SERINC2 -680432 sc-eQTL 9.62e-01 0.00379 0.0801 0.355 ncMono L2
ENSG00000284543 LINC01226 -777093 sc-eQTL 9.83e-01 -0.00169 0.08 0.355 ncMono L2
ENSG00000287510 AL137857.1 -2560 sc-eQTL 8.09e-02 -0.144 0.0823 0.355 ncMono L2
ENSG00000060688 SNRNP40 -567655 sc-eQTL 7.45e-01 0.0296 0.091 0.367 pDC L2
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 6.85e-01 -0.0406 0.0999 0.367 pDC L2
ENSG00000134644 PUM1 -336858 sc-eQTL 2.58e-01 0.0936 0.0825 0.367 pDC L2
ENSG00000162511 LAPTM5 -28641 sc-eQTL 8.11e-01 0.0184 0.077 0.367 pDC L2
ENSG00000162517 PEF1 -915763 sc-eQTL 8.75e-01 0.0158 0.0999 0.367 pDC L2
ENSG00000168528 SERINC2 -680432 sc-eQTL 8.98e-01 -0.012 0.0934 0.367 pDC L2
ENSG00000284543 LINC01226 -777093 sc-eQTL 2.51e-01 -0.0832 0.0722 0.367 pDC L2
ENSG00000287510 AL137857.1 -2560 sc-eQTL 8.64e-01 -0.0147 0.0853 0.367 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -567655 sc-eQTL 1.45e-01 0.135 0.0923 0.35 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 9.08e-01 -0.0089 0.0772 0.35 B_Memory LOneK1K
ENSG00000134644 PUM1 -336858 sc-eQTL 5.56e-01 0.0404 0.0684 0.35 B_Memory LOneK1K
ENSG00000162510 MATN1 5548 sc-eQTL 9.44e-01 -0.0055 0.078 0.35 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -28641 sc-eQTL 8.76e-02 0.0835 0.0487 0.35 B_Memory LOneK1K
ENSG00000162517 PEF1 -915763 sc-eQTL 1.52e-01 -0.116 0.0808 0.35 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 10629 sc-eQTL 3.51e-01 0.0605 0.0647 0.35 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -2560 sc-eQTL 8.33e-01 -0.0149 0.0707 0.35 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -567655 sc-eQTL 8.21e-01 0.0192 0.0849 0.35 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 2.98e-01 -0.0699 0.0669 0.35 B_Naive LOneK1K
ENSG00000134644 PUM1 -336858 sc-eQTL 5.45e-01 0.0385 0.0634 0.35 B_Naive LOneK1K
ENSG00000162510 MATN1 5548 sc-eQTL 1.79e-03 -0.189 0.0597 0.35 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -28641 sc-eQTL 6.44e-01 0.0199 0.043 0.35 B_Naive LOneK1K
ENSG00000162517 PEF1 -915763 sc-eQTL 4.73e-01 -0.0565 0.0785 0.35 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 10629 sc-eQTL 6.28e-01 -0.027 0.0555 0.35 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -2560 sc-eQTL 2.50e-01 0.0759 0.0658 0.35 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -567655 sc-eQTL 1.63e-01 0.0996 0.0711 0.35 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 7.34e-01 -0.0275 0.0809 0.35 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -336858 sc-eQTL 2.95e-01 0.0541 0.0515 0.35 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -28641 sc-eQTL 3.10e-01 -0.046 0.0453 0.35 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -179625 sc-eQTL 9.57e-01 -0.00501 0.0926 0.35 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -915763 sc-eQTL 2.25e-01 -0.079 0.0648 0.35 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -680432 sc-eQTL 7.46e-01 -0.0308 0.0952 0.35 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -777093 sc-eQTL 5.18e-01 -0.0505 0.078 0.35 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -2560 sc-eQTL 8.85e-01 -0.0106 0.0731 0.35 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -567655 sc-eQTL 8.18e-02 0.136 0.0779 0.351 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 3.65e-01 -0.0778 0.0857 0.351 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -336858 sc-eQTL 3.02e-01 0.0726 0.0702 0.351 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -28641 sc-eQTL 7.89e-01 0.015 0.0563 0.351 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -179625 sc-eQTL 1.50e-01 -0.118 0.0818 0.351 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -915763 sc-eQTL 7.72e-01 0.0216 0.0747 0.351 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -680432 sc-eQTL 1.62e-01 -0.119 0.0848 0.351 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -777093 sc-eQTL 6.91e-01 -0.0321 0.0809 0.351 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -2560 sc-eQTL 5.54e-01 -0.048 0.0809 0.351 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -567655 sc-eQTL 1.83e-02 0.205 0.0861 0.351 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -567849 sc-eQTL 3.16e-01 -0.0598 0.0595 0.351 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -336858 sc-eQTL 3.59e-01 0.06 0.0652 0.351 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -28641 sc-eQTL 5.19e-01 0.0471 0.0729 0.351 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -915763 sc-eQTL 4.41e-01 0.0427 0.0554 0.351 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 10629 sc-eQTL 5.68e-01 0.0481 0.0841 0.351 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -2560 sc-eQTL 9.36e-01 -0.00588 0.0727 0.351 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162510 MATN1 5548 eQTL 0.0482 0.038 0.0192 0.0 0.0 0.402
ENSG00000162511 LAPTM5 -28641 eQTL 2.9e-06 -0.0456 0.00968 0.0 0.0 0.402
ENSG00000168528 SERINC2 -680432 eQTL 0.00379 0.109 0.0377 0.0 0.0 0.402
ENSG00000186056 MATN1-AS1 10629 eQTL 3.24e-02 0.0264 0.0123 0.0 0.0 0.402

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162511 LAPTM5 -28641 1.05e-05 5.32e-06 6.64e-07 3.22e-06 1.63e-06 3.09e-06 7.6e-06 1.12e-06 5e-06 2.81e-06 8.09e-06 3.31e-06 9.94e-06 2.33e-06 1.11e-06 3.98e-06 1.82e-06 3.89e-06 1.41e-06 1.55e-06 2.51e-06 6.08e-06 4.78e-06 1.47e-06 8.44e-06 2.08e-06 2.79e-06 1.55e-06 4.49e-06 5.18e-06 2.83e-06 5.41e-07 8.21e-07 1.53e-06 2.09e-06 9.71e-07 9.78e-07 4.24e-07 9.12e-07 4.11e-07 4.57e-07 8.47e-06 1.49e-06 2.63e-08 7.18e-07 3.93e-07 1.13e-06 6.86e-07 3.21e-07