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Genes within 1Mb (chr1:30729109:G:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -567679 sc-eQTL 4.48e-01 0.0607 0.0798 0.35 B L1
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 4.36e-01 -0.0498 0.0639 0.35 B L1
ENSG00000134644 PUM1 -336882 sc-eQTL 4.18e-01 0.0434 0.0536 0.35 B L1
ENSG00000162510 MATN1 5524 sc-eQTL 7.34e-03 -0.15 0.0555 0.35 B L1
ENSG00000162511 LAPTM5 -28665 sc-eQTL 3.96e-01 0.0375 0.0441 0.35 B L1
ENSG00000162517 PEF1 -915787 sc-eQTL 5.52e-01 -0.0397 0.0666 0.35 B L1
ENSG00000186056 MATN1-AS1 10605 sc-eQTL 8.08e-01 -0.0126 0.0518 0.35 B L1
ENSG00000287510 AL137857.1 -2584 sc-eQTL 3.65e-01 0.0555 0.0612 0.35 B L1
ENSG00000060688 SNRNP40 -567679 sc-eQTL 5.67e-01 -0.0393 0.0686 0.35 CD4T L1
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 8.24e-01 0.0119 0.0536 0.35 CD4T L1
ENSG00000134644 PUM1 -336882 sc-eQTL 8.85e-01 -0.00689 0.0477 0.35 CD4T L1
ENSG00000162511 LAPTM5 -28665 sc-eQTL 5.73e-02 0.1 0.0525 0.35 CD4T L1
ENSG00000162517 PEF1 -915787 sc-eQTL 5.06e-01 0.0368 0.0553 0.35 CD4T L1
ENSG00000186056 MATN1-AS1 10605 sc-eQTL 2.16e-01 0.0585 0.0472 0.35 CD4T L1
ENSG00000287510 AL137857.1 -2584 sc-eQTL 5.48e-02 -0.109 0.0562 0.35 CD4T L1
ENSG00000060688 SNRNP40 -567679 sc-eQTL 9.22e-01 -0.00893 0.0906 0.35 CD8T L1
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 6.44e-01 -0.0279 0.0603 0.35 CD8T L1
ENSG00000134644 PUM1 -336882 sc-eQTL 7.72e-01 0.0154 0.0531 0.35 CD8T L1
ENSG00000162511 LAPTM5 -28665 sc-eQTL 5.11e-01 0.0339 0.0515 0.35 CD8T L1
ENSG00000162517 PEF1 -915787 sc-eQTL 8.12e-01 0.0152 0.0635 0.35 CD8T L1
ENSG00000186056 MATN1-AS1 10605 sc-eQTL 4.64e-01 0.0442 0.0604 0.35 CD8T L1
ENSG00000287510 AL137857.1 -2584 sc-eQTL 3.80e-01 -0.0668 0.0758 0.35 CD8T L1
ENSG00000060688 SNRNP40 -567679 sc-eQTL 6.82e-01 -0.0331 0.0806 0.358 DC L1
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 5.44e-01 -0.058 0.0954 0.358 DC L1
ENSG00000134644 PUM1 -336882 sc-eQTL 3.97e-01 0.0634 0.0747 0.358 DC L1
ENSG00000162511 LAPTM5 -28665 sc-eQTL 1.23e-01 0.0822 0.0531 0.358 DC L1
ENSG00000162517 PEF1 -915787 sc-eQTL 8.50e-01 0.0164 0.0866 0.358 DC L1
ENSG00000168528 SERINC2 -680456 sc-eQTL 8.34e-01 0.0185 0.0881 0.358 DC L1
ENSG00000284543 LINC01226 -777117 sc-eQTL 7.06e-01 0.0221 0.0583 0.358 DC L1
ENSG00000287510 AL137857.1 -2584 sc-eQTL 5.55e-01 -0.0499 0.0844 0.358 DC L1
ENSG00000060688 SNRNP40 -567679 sc-eQTL 1.26e-01 0.0952 0.062 0.35 Mono L1
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 4.66e-01 -0.0564 0.0771 0.35 Mono L1
ENSG00000134644 PUM1 -336882 sc-eQTL 2.19e-01 0.0608 0.0493 0.35 Mono L1
ENSG00000162511 LAPTM5 -28665 sc-eQTL 4.67e-01 -0.0332 0.0455 0.35 Mono L1
ENSG00000162512 SDC3 -179649 sc-eQTL 3.83e-01 -0.0764 0.0874 0.35 Mono L1
ENSG00000162517 PEF1 -915787 sc-eQTL 2.90e-01 -0.065 0.0613 0.35 Mono L1
ENSG00000168528 SERINC2 -680456 sc-eQTL 5.50e-01 -0.0562 0.0939 0.35 Mono L1
ENSG00000284543 LINC01226 -777117 sc-eQTL 5.41e-01 -0.0507 0.0827 0.35 Mono L1
ENSG00000287510 AL137857.1 -2584 sc-eQTL 8.29e-01 -0.0157 0.0723 0.35 Mono L1
ENSG00000060688 SNRNP40 -567679 sc-eQTL 1.20e-02 0.217 0.0855 0.35 NK L1
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 1.30e-01 -0.0899 0.0591 0.35 NK L1
ENSG00000134644 PUM1 -336882 sc-eQTL 3.80e-01 0.0548 0.0622 0.35 NK L1
ENSG00000162511 LAPTM5 -28665 sc-eQTL 4.04e-01 0.0599 0.0716 0.35 NK L1
ENSG00000162517 PEF1 -915787 sc-eQTL 5.32e-01 0.0328 0.0523 0.35 NK L1
ENSG00000186056 MATN1-AS1 10605 sc-eQTL 7.07e-01 0.0303 0.0806 0.35 NK L1
ENSG00000287510 AL137857.1 -2584 sc-eQTL 5.04e-01 0.0497 0.0744 0.35 NK L1
ENSG00000060688 SNRNP40 -567679 sc-eQTL 1.91e-01 0.0849 0.0647 0.35 Other_T L1
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 4.71e-01 -0.0501 0.0693 0.35 Other_T L1
ENSG00000134644 PUM1 -336882 sc-eQTL 1.14e-02 -0.157 0.0615 0.35 Other_T L1
ENSG00000162511 LAPTM5 -28665 sc-eQTL 6.55e-02 0.0939 0.0507 0.35 Other_T L1
ENSG00000162517 PEF1 -915787 sc-eQTL 8.98e-01 0.00876 0.0683 0.35 Other_T L1
ENSG00000186056 MATN1-AS1 10605 sc-eQTL 2.99e-01 0.0871 0.0836 0.35 Other_T L1
ENSG00000287510 AL137857.1 -2584 sc-eQTL 1.17e-01 -0.136 0.0867 0.35 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -567679 sc-eQTL 1.93e-01 0.133 0.102 0.36 B_Activated L2
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 2.66e-01 0.115 0.103 0.36 B_Activated L2
ENSG00000134644 PUM1 -336882 sc-eQTL 8.92e-01 0.0131 0.096 0.36 B_Activated L2
ENSG00000162510 MATN1 5524 sc-eQTL 3.01e-01 -0.0868 0.0836 0.36 B_Activated L2
ENSG00000162511 LAPTM5 -28665 sc-eQTL 8.08e-01 0.0143 0.0585 0.36 B_Activated L2
ENSG00000162517 PEF1 -915787 sc-eQTL 6.30e-01 0.048 0.0995 0.36 B_Activated L2
ENSG00000186056 MATN1-AS1 10605 sc-eQTL 3.32e-01 0.0917 0.0942 0.36 B_Activated L2
ENSG00000287510 AL137857.1 -2584 sc-eQTL 1.72e-01 -0.114 0.0831 0.36 B_Activated L2
ENSG00000060688 SNRNP40 -567679 sc-eQTL 9.54e-01 0.00572 0.0984 0.35 B_Intermediate L2
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 8.06e-01 0.0202 0.082 0.35 B_Intermediate L2
ENSG00000134644 PUM1 -336882 sc-eQTL 3.57e-01 0.0713 0.0772 0.35 B_Intermediate L2
ENSG00000162510 MATN1 5524 sc-eQTL 5.36e-01 0.0498 0.0804 0.35 B_Intermediate L2
ENSG00000162511 LAPTM5 -28665 sc-eQTL 3.22e-01 0.0489 0.0493 0.35 B_Intermediate L2
ENSG00000162517 PEF1 -915787 sc-eQTL 1.78e-01 -0.124 0.0913 0.35 B_Intermediate L2
ENSG00000186056 MATN1-AS1 10605 sc-eQTL 4.35e-01 0.0541 0.0692 0.35 B_Intermediate L2
ENSG00000287510 AL137857.1 -2584 sc-eQTL 4.57e-01 0.0578 0.0775 0.35 B_Intermediate L2
ENSG00000060688 SNRNP40 -567679 sc-eQTL 1.07e-01 0.154 0.095 0.351 B_Memory L2
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 4.77e-01 -0.0626 0.0879 0.351 B_Memory L2
ENSG00000134644 PUM1 -336882 sc-eQTL 9.89e-01 -0.00102 0.0766 0.351 B_Memory L2
ENSG00000162510 MATN1 5524 sc-eQTL 2.82e-01 -0.0789 0.0731 0.351 B_Memory L2
ENSG00000162511 LAPTM5 -28665 sc-eQTL 8.85e-01 0.00939 0.065 0.351 B_Memory L2
ENSG00000162517 PEF1 -915787 sc-eQTL 9.62e-01 0.00409 0.0868 0.351 B_Memory L2
ENSG00000186056 MATN1-AS1 10605 sc-eQTL 9.82e-01 -0.00171 0.0744 0.351 B_Memory L2
ENSG00000287510 AL137857.1 -2584 sc-eQTL 7.36e-01 -0.0294 0.0871 0.351 B_Memory L2
ENSG00000060688 SNRNP40 -567679 sc-eQTL 2.23e-01 0.106 0.0868 0.35 B_Naive1 L2
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 2.58e-01 0.0851 0.075 0.35 B_Naive1 L2
ENSG00000134644 PUM1 -336882 sc-eQTL 4.59e-01 0.0492 0.0662 0.35 B_Naive1 L2
ENSG00000162510 MATN1 5524 sc-eQTL 2.83e-03 -0.199 0.0659 0.35 B_Naive1 L2
ENSG00000162511 LAPTM5 -28665 sc-eQTL 5.12e-01 0.0295 0.0449 0.35 B_Naive1 L2
ENSG00000162517 PEF1 -915787 sc-eQTL 9.48e-01 -0.00516 0.0792 0.35 B_Naive1 L2
ENSG00000186056 MATN1-AS1 10605 sc-eQTL 6.88e-01 -0.0238 0.059 0.35 B_Naive1 L2
ENSG00000287510 AL137857.1 -2584 sc-eQTL 2.19e-02 0.166 0.072 0.35 B_Naive1 L2
ENSG00000060688 SNRNP40 -567679 sc-eQTL 4.11e-01 -0.0762 0.0925 0.35 B_Naive2 L2
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 1.08e-04 -0.291 0.0738 0.35 B_Naive2 L2
ENSG00000134644 PUM1 -336882 sc-eQTL 8.08e-01 -0.0182 0.0748 0.35 B_Naive2 L2
ENSG00000162510 MATN1 5524 sc-eQTL 4.52e-02 -0.143 0.0712 0.35 B_Naive2 L2
ENSG00000162511 LAPTM5 -28665 sc-eQTL 8.71e-01 0.00793 0.0488 0.35 B_Naive2 L2
ENSG00000162517 PEF1 -915787 sc-eQTL 6.63e-01 -0.0388 0.0887 0.35 B_Naive2 L2
ENSG00000186056 MATN1-AS1 10605 sc-eQTL 4.97e-01 0.0483 0.071 0.35 B_Naive2 L2
ENSG00000287510 AL137857.1 -2584 sc-eQTL 1.68e-01 -0.106 0.0764 0.35 B_Naive2 L2
ENSG00000060688 SNRNP40 -567679 sc-eQTL 3.63e-01 -0.0826 0.0905 0.35 CD4_CTL L2
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 9.51e-01 -0.00549 0.0892 0.35 CD4_CTL L2
ENSG00000134644 PUM1 -336882 sc-eQTL 3.75e-01 0.0776 0.0873 0.35 CD4_CTL L2
ENSG00000162511 LAPTM5 -28665 sc-eQTL 4.59e-01 -0.0578 0.0779 0.35 CD4_CTL L2
ENSG00000162517 PEF1 -915787 sc-eQTL 5.89e-01 -0.0433 0.0799 0.35 CD4_CTL L2
ENSG00000186056 MATN1-AS1 10605 sc-eQTL 3.29e-01 0.0833 0.0851 0.35 CD4_CTL L2
ENSG00000287510 AL137857.1 -2584 sc-eQTL 1.19e-01 -0.117 0.0748 0.35 CD4_CTL L2
ENSG00000060688 SNRNP40 -567679 sc-eQTL 2.96e-01 -0.0752 0.0718 0.35 CD4_Naive L2
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 9.14e-01 0.00691 0.0638 0.35 CD4_Naive L2
ENSG00000134644 PUM1 -336882 sc-eQTL 6.79e-01 -0.0211 0.0509 0.35 CD4_Naive L2
ENSG00000162511 LAPTM5 -28665 sc-eQTL 6.05e-02 0.102 0.0541 0.35 CD4_Naive L2
ENSG00000162517 PEF1 -915787 sc-eQTL 8.57e-01 0.0108 0.0599 0.35 CD4_Naive L2
ENSG00000186056 MATN1-AS1 10605 sc-eQTL 8.28e-01 0.0121 0.0554 0.35 CD4_Naive L2
ENSG00000287510 AL137857.1 -2584 sc-eQTL 9.02e-01 0.00786 0.0636 0.35 CD4_Naive L2
ENSG00000060688 SNRNP40 -567679 sc-eQTL 8.13e-01 0.0213 0.0898 0.35 CD4_TCM L2
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 7.41e-01 0.0239 0.0724 0.35 CD4_TCM L2
ENSG00000134644 PUM1 -336882 sc-eQTL 7.25e-01 0.0226 0.0641 0.35 CD4_TCM L2
ENSG00000162511 LAPTM5 -28665 sc-eQTL 9.40e-03 0.137 0.0524 0.35 CD4_TCM L2
ENSG00000162517 PEF1 -915787 sc-eQTL 4.24e-01 0.057 0.0712 0.35 CD4_TCM L2
ENSG00000186056 MATN1-AS1 10605 sc-eQTL 1.69e-01 0.0928 0.0672 0.35 CD4_TCM L2
ENSG00000287510 AL137857.1 -2584 sc-eQTL 6.27e-02 -0.14 0.0746 0.35 CD4_TCM L2
ENSG00000060688 SNRNP40 -567679 sc-eQTL 7.97e-01 0.0232 0.09 0.35 CD4_TEM L2
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 7.07e-01 -0.0323 0.0858 0.35 CD4_TEM L2
ENSG00000134644 PUM1 -336882 sc-eQTL 3.88e-01 0.0616 0.0713 0.35 CD4_TEM L2
ENSG00000162511 LAPTM5 -28665 sc-eQTL 1.58e-01 0.102 0.0719 0.35 CD4_TEM L2
ENSG00000162517 PEF1 -915787 sc-eQTL 6.70e-01 0.0346 0.0809 0.35 CD4_TEM L2
ENSG00000186056 MATN1-AS1 10605 sc-eQTL 7.27e-01 0.0295 0.0845 0.35 CD4_TEM L2
ENSG00000287510 AL137857.1 -2584 sc-eQTL 3.09e-01 -0.0847 0.0831 0.35 CD4_TEM L2
ENSG00000060688 SNRNP40 -567679 sc-eQTL 4.02e-01 -0.082 0.0976 0.35 CD8_CTL L2
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 4.58e-02 -0.149 0.0743 0.35 CD8_CTL L2
ENSG00000134644 PUM1 -336882 sc-eQTL 6.34e-02 0.135 0.0722 0.35 CD8_CTL L2
ENSG00000162511 LAPTM5 -28665 sc-eQTL 6.81e-01 -0.0332 0.0806 0.35 CD8_CTL L2
ENSG00000162517 PEF1 -915787 sc-eQTL 5.72e-01 -0.0397 0.0702 0.35 CD8_CTL L2
ENSG00000186056 MATN1-AS1 10605 sc-eQTL 9.00e-01 0.0107 0.0848 0.35 CD8_CTL L2
ENSG00000287510 AL137857.1 -2584 sc-eQTL 5.13e-01 -0.0522 0.0796 0.35 CD8_CTL L2
ENSG00000060688 SNRNP40 -567679 sc-eQTL 4.66e-01 0.0658 0.0901 0.35 CD8_Naive L2
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 4.09e-01 0.0642 0.0777 0.35 CD8_Naive L2
ENSG00000134644 PUM1 -336882 sc-eQTL 6.44e-01 -0.029 0.0626 0.35 CD8_Naive L2
ENSG00000162511 LAPTM5 -28665 sc-eQTL 5.09e-02 0.117 0.0595 0.35 CD8_Naive L2
ENSG00000162517 PEF1 -915787 sc-eQTL 6.27e-01 0.0406 0.0834 0.35 CD8_Naive L2
ENSG00000186056 MATN1-AS1 10605 sc-eQTL 2.33e-01 0.0892 0.0747 0.35 CD8_Naive L2
ENSG00000287510 AL137857.1 -2584 sc-eQTL 9.34e-01 0.00672 0.0816 0.35 CD8_Naive L2
ENSG00000060688 SNRNP40 -567679 sc-eQTL 7.30e-01 -0.035 0.101 0.35 CD8_TCM L2
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 5.36e-01 0.0574 0.0927 0.35 CD8_TCM L2
ENSG00000134644 PUM1 -336882 sc-eQTL 9.82e-01 -0.00194 0.0872 0.35 CD8_TCM L2
ENSG00000162511 LAPTM5 -28665 sc-eQTL 7.73e-01 0.0264 0.0913 0.35 CD8_TCM L2
ENSG00000162517 PEF1 -915787 sc-eQTL 8.89e-01 -0.013 0.0933 0.35 CD8_TCM L2
ENSG00000186056 MATN1-AS1 10605 sc-eQTL 7.70e-01 0.0247 0.0845 0.35 CD8_TCM L2
ENSG00000287510 AL137857.1 -2584 sc-eQTL 6.29e-01 0.0413 0.0854 0.35 CD8_TCM L2
ENSG00000060688 SNRNP40 -567679 sc-eQTL 2.65e-01 0.107 0.0958 0.345 CD8_TEM L2
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 4.99e-01 0.0623 0.0921 0.345 CD8_TEM L2
ENSG00000134644 PUM1 -336882 sc-eQTL 5.78e-01 -0.0525 0.0942 0.345 CD8_TEM L2
ENSG00000162511 LAPTM5 -28665 sc-eQTL 4.85e-01 -0.0619 0.0885 0.345 CD8_TEM L2
ENSG00000162517 PEF1 -915787 sc-eQTL 8.50e-01 0.0158 0.0834 0.345 CD8_TEM L2
ENSG00000186056 MATN1-AS1 10605 sc-eQTL 5.27e-02 -0.178 0.0911 0.345 CD8_TEM L2
ENSG00000287510 AL137857.1 -2584 sc-eQTL 7.79e-01 -0.0234 0.0832 0.345 CD8_TEM L2
ENSG00000060688 SNRNP40 -567679 sc-eQTL 1.58e-01 0.134 0.0943 0.351 MAIT L2
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 3.33e-01 0.0813 0.0838 0.351 MAIT L2
ENSG00000134644 PUM1 -336882 sc-eQTL 1.69e-01 -0.111 0.0802 0.351 MAIT L2
ENSG00000162511 LAPTM5 -28665 sc-eQTL 9.37e-02 0.127 0.0754 0.351 MAIT L2
ENSG00000162517 PEF1 -915787 sc-eQTL 6.40e-01 0.0391 0.0834 0.351 MAIT L2
ENSG00000186056 MATN1-AS1 10605 sc-eQTL 3.99e-01 0.0714 0.0844 0.351 MAIT L2
ENSG00000287510 AL137857.1 -2584 sc-eQTL 9.60e-02 -0.145 0.0866 0.351 MAIT L2
ENSG00000060688 SNRNP40 -567679 sc-eQTL 1.50e-01 0.141 0.0977 0.356 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 4.60e-02 -0.165 0.0822 0.356 NK_CD56bright L2
ENSG00000134644 PUM1 -336882 sc-eQTL 6.59e-01 0.0385 0.0871 0.356 NK_CD56bright L2
ENSG00000162511 LAPTM5 -28665 sc-eQTL 1.18e-01 0.134 0.0854 0.356 NK_CD56bright L2
ENSG00000162517 PEF1 -915787 sc-eQTL 4.48e-01 -0.0634 0.0834 0.356 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 10605 sc-eQTL 2.46e-01 -0.1 0.0861 0.356 NK_CD56bright L2
ENSG00000287510 AL137857.1 -2584 sc-eQTL 2.10e-01 0.107 0.0848 0.356 NK_CD56bright L2
ENSG00000060688 SNRNP40 -567679 sc-eQTL 2.97e-01 0.0962 0.092 0.351 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 7.19e-02 -0.122 0.0677 0.351 NK_CD56dim L2
ENSG00000134644 PUM1 -336882 sc-eQTL 5.24e-01 0.0446 0.0699 0.351 NK_CD56dim L2
ENSG00000162511 LAPTM5 -28665 sc-eQTL 7.57e-01 0.0231 0.0746 0.351 NK_CD56dim L2
ENSG00000162517 PEF1 -915787 sc-eQTL 9.00e-01 0.00837 0.0664 0.351 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 10605 sc-eQTL 3.38e-01 0.0896 0.0933 0.351 NK_CD56dim L2
ENSG00000287510 AL137857.1 -2584 sc-eQTL 5.69e-01 0.0439 0.077 0.351 NK_CD56dim L2
ENSG00000060688 SNRNP40 -567679 sc-eQTL 8.73e-01 0.016 0.0999 0.356 NK_HLA L2
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 1.54e-01 0.127 0.0888 0.356 NK_HLA L2
ENSG00000134644 PUM1 -336882 sc-eQTL 9.94e-01 -0.000704 0.087 0.356 NK_HLA L2
ENSG00000162511 LAPTM5 -28665 sc-eQTL 6.66e-01 0.0359 0.0829 0.356 NK_HLA L2
ENSG00000162517 PEF1 -915787 sc-eQTL 6.04e-01 -0.0486 0.0934 0.356 NK_HLA L2
ENSG00000186056 MATN1-AS1 10605 sc-eQTL 9.92e-01 0.000854 0.0883 0.356 NK_HLA L2
ENSG00000287510 AL137857.1 -2584 sc-eQTL 3.26e-01 0.0839 0.0852 0.356 NK_HLA L2
ENSG00000060688 SNRNP40 -567679 sc-eQTL 8.14e-02 0.157 0.0899 0.351 NK_cytokine L2
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 5.37e-01 -0.0437 0.0706 0.351 NK_cytokine L2
ENSG00000134644 PUM1 -336882 sc-eQTL 2.52e-01 0.0875 0.0762 0.351 NK_cytokine L2
ENSG00000162511 LAPTM5 -28665 sc-eQTL 8.81e-01 0.0126 0.0841 0.351 NK_cytokine L2
ENSG00000162517 PEF1 -915787 sc-eQTL 4.10e-01 0.0591 0.0716 0.351 NK_cytokine L2
ENSG00000186056 MATN1-AS1 10605 sc-eQTL 5.79e-01 0.0495 0.0891 0.351 NK_cytokine L2
ENSG00000287510 AL137857.1 -2584 sc-eQTL 6.74e-01 0.0349 0.0829 0.351 NK_cytokine L2
ENSG00000060688 SNRNP40 -567679 sc-eQTL 1.32e-01 0.166 0.11 0.344 PB L2
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 6.49e-01 -0.0586 0.128 0.344 PB L2
ENSG00000134644 PUM1 -336882 sc-eQTL 3.09e-01 -0.113 0.111 0.344 PB L2
ENSG00000162510 MATN1 5524 sc-eQTL 7.08e-01 0.039 0.104 0.344 PB L2
ENSG00000162511 LAPTM5 -28665 sc-eQTL 7.88e-01 0.02 0.0742 0.344 PB L2
ENSG00000162517 PEF1 -915787 sc-eQTL 5.73e-01 -0.0645 0.114 0.344 PB L2
ENSG00000186056 MATN1-AS1 10605 sc-eQTL 2.11e-01 0.127 0.101 0.344 PB L2
ENSG00000287510 AL137857.1 -2584 sc-eQTL 3.37e-01 -0.104 0.108 0.344 PB L2
ENSG00000060688 SNRNP40 -567679 sc-eQTL 5.47e-01 -0.0423 0.0701 0.348 Pro_T L2
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 6.14e-02 -0.166 0.0884 0.348 Pro_T L2
ENSG00000134644 PUM1 -336882 sc-eQTL 1.62e-01 -0.116 0.0827 0.348 Pro_T L2
ENSG00000162511 LAPTM5 -28665 sc-eQTL 9.85e-01 0.00116 0.0596 0.348 Pro_T L2
ENSG00000162517 PEF1 -915787 sc-eQTL 5.86e-01 -0.0477 0.0874 0.348 Pro_T L2
ENSG00000186056 MATN1-AS1 10605 sc-eQTL 5.37e-01 -0.0515 0.0833 0.348 Pro_T L2
ENSG00000287510 AL137857.1 -2584 sc-eQTL 2.14e-01 -0.0952 0.0764 0.348 Pro_T L2
ENSG00000060688 SNRNP40 -567679 sc-eQTL 2.29e-01 0.111 0.0924 0.35 Treg L2
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 5.71e-01 0.0508 0.0896 0.35 Treg L2
ENSG00000134644 PUM1 -336882 sc-eQTL 9.52e-01 -0.00429 0.0718 0.35 Treg L2
ENSG00000162511 LAPTM5 -28665 sc-eQTL 3.70e-01 0.0737 0.082 0.35 Treg L2
ENSG00000162517 PEF1 -915787 sc-eQTL 4.43e-01 0.0681 0.0886 0.35 Treg L2
ENSG00000186056 MATN1-AS1 10605 sc-eQTL 1.71e-01 0.114 0.0834 0.35 Treg L2
ENSG00000287510 AL137857.1 -2584 sc-eQTL 5.35e-01 -0.0519 0.0836 0.35 Treg L2
ENSG00000060688 SNRNP40 -567679 sc-eQTL 8.75e-01 -0.0144 0.0912 0.363 cDC L2
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 9.76e-01 0.00292 0.0987 0.363 cDC L2
ENSG00000134644 PUM1 -336882 sc-eQTL 6.32e-01 0.0406 0.0848 0.363 cDC L2
ENSG00000162511 LAPTM5 -28665 sc-eQTL 1.54e-01 0.0847 0.0591 0.363 cDC L2
ENSG00000162517 PEF1 -915787 sc-eQTL 4.37e-01 0.067 0.086 0.363 cDC L2
ENSG00000168528 SERINC2 -680456 sc-eQTL 2.70e-01 -0.0843 0.0761 0.363 cDC L2
ENSG00000284543 LINC01226 -777117 sc-eQTL 8.79e-03 0.195 0.0736 0.363 cDC L2
ENSG00000287510 AL137857.1 -2584 sc-eQTL 4.97e-01 -0.0549 0.0806 0.363 cDC L2
ENSG00000060688 SNRNP40 -567679 sc-eQTL 1.33e-01 0.113 0.075 0.35 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 4.11e-01 -0.0692 0.0839 0.35 cMono_IL1B L2
ENSG00000134644 PUM1 -336882 sc-eQTL 3.82e-01 0.0498 0.0568 0.35 cMono_IL1B L2
ENSG00000162511 LAPTM5 -28665 sc-eQTL 3.98e-01 -0.0422 0.0499 0.35 cMono_IL1B L2
ENSG00000162512 SDC3 -179649 sc-eQTL 2.81e-01 -0.101 0.0938 0.35 cMono_IL1B L2
ENSG00000162517 PEF1 -915787 sc-eQTL 5.78e-01 -0.0428 0.0768 0.35 cMono_IL1B L2
ENSG00000168528 SERINC2 -680456 sc-eQTL 7.61e-01 -0.029 0.0952 0.35 cMono_IL1B L2
ENSG00000284543 LINC01226 -777117 sc-eQTL 3.80e-01 -0.0739 0.084 0.35 cMono_IL1B L2
ENSG00000287510 AL137857.1 -2584 sc-eQTL 4.64e-01 -0.0576 0.0784 0.35 cMono_IL1B L2
ENSG00000060688 SNRNP40 -567679 sc-eQTL 2.78e-01 0.0858 0.0789 0.35 cMono_S100A L2
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 6.07e-01 0.0481 0.0935 0.35 cMono_S100A L2
ENSG00000134644 PUM1 -336882 sc-eQTL 7.22e-01 0.0241 0.0676 0.35 cMono_S100A L2
ENSG00000162511 LAPTM5 -28665 sc-eQTL 8.69e-01 -0.0086 0.0519 0.35 cMono_S100A L2
ENSG00000162512 SDC3 -179649 sc-eQTL 1.24e-01 0.138 0.0892 0.35 cMono_S100A L2
ENSG00000162517 PEF1 -915787 sc-eQTL 2.18e-01 -0.0997 0.0807 0.35 cMono_S100A L2
ENSG00000168528 SERINC2 -680456 sc-eQTL 8.18e-01 -0.0219 0.095 0.35 cMono_S100A L2
ENSG00000284543 LINC01226 -777117 sc-eQTL 4.83e-01 -0.0542 0.0771 0.35 cMono_S100A L2
ENSG00000287510 AL137857.1 -2584 sc-eQTL 9.40e-01 -0.00581 0.0775 0.35 cMono_S100A L2
ENSG00000060688 SNRNP40 -567679 sc-eQTL 6.53e-01 -0.0526 0.117 0.342 gdT L2
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 8.08e-01 0.0244 0.1 0.342 gdT L2
ENSG00000134644 PUM1 -336882 sc-eQTL 8.27e-01 0.0227 0.104 0.342 gdT L2
ENSG00000162511 LAPTM5 -28665 sc-eQTL 5.92e-01 -0.0605 0.112 0.342 gdT L2
ENSG00000162517 PEF1 -915787 sc-eQTL 7.27e-01 0.036 0.103 0.342 gdT L2
ENSG00000186056 MATN1-AS1 10605 sc-eQTL 5.45e-01 0.0629 0.104 0.342 gdT L2
ENSG00000287510 AL137857.1 -2584 sc-eQTL 3.09e-01 -0.102 0.1 0.342 gdT L2
ENSG00000060688 SNRNP40 -567679 sc-eQTL 3.01e-01 0.0919 0.0886 0.353 intMono L2
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 3.69e-01 -0.0858 0.0953 0.353 intMono L2
ENSG00000134644 PUM1 -336882 sc-eQTL 5.19e-01 0.0523 0.081 0.353 intMono L2
ENSG00000162511 LAPTM5 -28665 sc-eQTL 7.14e-01 0.0233 0.0636 0.353 intMono L2
ENSG00000162512 SDC3 -179649 sc-eQTL 3.32e-01 -0.0845 0.0869 0.353 intMono L2
ENSG00000162517 PEF1 -915787 sc-eQTL 8.91e-01 0.0126 0.0915 0.353 intMono L2
ENSG00000168528 SERINC2 -680456 sc-eQTL 7.97e-02 -0.159 0.0904 0.353 intMono L2
ENSG00000284543 LINC01226 -777117 sc-eQTL 6.88e-01 -0.0347 0.0863 0.353 intMono L2
ENSG00000287510 AL137857.1 -2584 sc-eQTL 8.24e-01 -0.0192 0.0864 0.353 intMono L2
ENSG00000060688 SNRNP40 -567679 sc-eQTL 1.82e-01 0.11 0.0824 0.355 ncMono L2
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 7.73e-01 0.0255 0.0882 0.355 ncMono L2
ENSG00000134644 PUM1 -336882 sc-eQTL 1.66e-01 0.0997 0.0717 0.355 ncMono L2
ENSG00000162511 LAPTM5 -28665 sc-eQTL 4.67e-01 0.0476 0.0654 0.355 ncMono L2
ENSG00000162512 SDC3 -179649 sc-eQTL 2.49e-01 -0.0845 0.0732 0.355 ncMono L2
ENSG00000162517 PEF1 -915787 sc-eQTL 1.58e-01 0.119 0.0838 0.355 ncMono L2
ENSG00000168528 SERINC2 -680456 sc-eQTL 9.62e-01 0.00379 0.0801 0.355 ncMono L2
ENSG00000284543 LINC01226 -777117 sc-eQTL 9.83e-01 -0.00169 0.08 0.355 ncMono L2
ENSG00000287510 AL137857.1 -2584 sc-eQTL 8.09e-02 -0.144 0.0823 0.355 ncMono L2
ENSG00000060688 SNRNP40 -567679 sc-eQTL 7.45e-01 0.0296 0.091 0.367 pDC L2
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 6.85e-01 -0.0406 0.0999 0.367 pDC L2
ENSG00000134644 PUM1 -336882 sc-eQTL 2.58e-01 0.0936 0.0825 0.367 pDC L2
ENSG00000162511 LAPTM5 -28665 sc-eQTL 8.11e-01 0.0184 0.077 0.367 pDC L2
ENSG00000162517 PEF1 -915787 sc-eQTL 8.75e-01 0.0158 0.0999 0.367 pDC L2
ENSG00000168528 SERINC2 -680456 sc-eQTL 8.98e-01 -0.012 0.0934 0.367 pDC L2
ENSG00000284543 LINC01226 -777117 sc-eQTL 2.51e-01 -0.0832 0.0722 0.367 pDC L2
ENSG00000287510 AL137857.1 -2584 sc-eQTL 8.64e-01 -0.0147 0.0853 0.367 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -567679 sc-eQTL 1.45e-01 0.135 0.0923 0.35 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 9.08e-01 -0.0089 0.0772 0.35 B_Memory LOneK1K
ENSG00000134644 PUM1 -336882 sc-eQTL 5.56e-01 0.0404 0.0684 0.35 B_Memory LOneK1K
ENSG00000162510 MATN1 5524 sc-eQTL 9.44e-01 -0.0055 0.078 0.35 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -28665 sc-eQTL 8.76e-02 0.0835 0.0487 0.35 B_Memory LOneK1K
ENSG00000162517 PEF1 -915787 sc-eQTL 1.52e-01 -0.116 0.0808 0.35 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 10605 sc-eQTL 3.51e-01 0.0605 0.0647 0.35 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -2584 sc-eQTL 8.33e-01 -0.0149 0.0707 0.35 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -567679 sc-eQTL 8.21e-01 0.0192 0.0849 0.35 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 2.98e-01 -0.0699 0.0669 0.35 B_Naive LOneK1K
ENSG00000134644 PUM1 -336882 sc-eQTL 5.45e-01 0.0385 0.0634 0.35 B_Naive LOneK1K
ENSG00000162510 MATN1 5524 sc-eQTL 1.79e-03 -0.189 0.0597 0.35 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -28665 sc-eQTL 6.44e-01 0.0199 0.043 0.35 B_Naive LOneK1K
ENSG00000162517 PEF1 -915787 sc-eQTL 4.73e-01 -0.0565 0.0785 0.35 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 10605 sc-eQTL 6.28e-01 -0.027 0.0555 0.35 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -2584 sc-eQTL 2.50e-01 0.0759 0.0658 0.35 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -567679 sc-eQTL 1.63e-01 0.0996 0.0711 0.35 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 7.34e-01 -0.0275 0.0809 0.35 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -336882 sc-eQTL 2.95e-01 0.0541 0.0515 0.35 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -28665 sc-eQTL 3.10e-01 -0.046 0.0453 0.35 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -179649 sc-eQTL 9.57e-01 -0.00501 0.0926 0.35 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -915787 sc-eQTL 2.25e-01 -0.079 0.0648 0.35 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -680456 sc-eQTL 7.46e-01 -0.0308 0.0952 0.35 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -777117 sc-eQTL 5.18e-01 -0.0505 0.078 0.35 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -2584 sc-eQTL 8.85e-01 -0.0106 0.0731 0.35 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -567679 sc-eQTL 8.18e-02 0.136 0.0779 0.351 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 3.65e-01 -0.0778 0.0857 0.351 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -336882 sc-eQTL 3.02e-01 0.0726 0.0702 0.351 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -28665 sc-eQTL 7.89e-01 0.015 0.0563 0.351 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -179649 sc-eQTL 1.50e-01 -0.118 0.0818 0.351 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -915787 sc-eQTL 7.72e-01 0.0216 0.0747 0.351 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -680456 sc-eQTL 1.62e-01 -0.119 0.0848 0.351 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -777117 sc-eQTL 6.91e-01 -0.0321 0.0809 0.351 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -2584 sc-eQTL 5.54e-01 -0.048 0.0809 0.351 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -567679 sc-eQTL 1.83e-02 0.205 0.0861 0.351 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -567873 sc-eQTL 3.16e-01 -0.0598 0.0595 0.351 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -336882 sc-eQTL 3.59e-01 0.06 0.0652 0.351 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -28665 sc-eQTL 5.19e-01 0.0471 0.0729 0.351 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -915787 sc-eQTL 4.41e-01 0.0427 0.0554 0.351 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 10605 sc-eQTL 5.68e-01 0.0481 0.0841 0.351 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -2584 sc-eQTL 9.36e-01 -0.00588 0.0727 0.351 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162510 MATN1 5524 eQTL 0.047 0.0382 0.0192 0.0 0.0 0.402
ENSG00000162511 LAPTM5 -28665 eQTL 2.74e-06 -0.0457 0.00968 0.0 0.0 0.402
ENSG00000168528 SERINC2 -680456 eQTL 0.00389 0.109 0.0377 0.0 0.0 0.402
ENSG00000186056 MATN1-AS1 10605 eQTL 3.31e-02 0.0263 0.0123 0.0 0.0 0.402

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162511 LAPTM5 -28665 1.57e-05 1.58e-05 1.96e-06 8.01e-06 2.38e-06 6.64e-06 1.87e-05 2.16e-06 1.26e-05 6.2e-06 1.67e-05 6.68e-06 2.39e-05 4.89e-06 3.88e-06 7.01e-06 6.8e-06 1.07e-05 3.65e-06 3.16e-06 6.79e-06 1.22e-05 1.24e-05 3.75e-06 2.22e-05 4.33e-06 6.39e-06 5.04e-06 1.39e-05 1.31e-05 8.68e-06 9.77e-07 1.25e-06 3.37e-06 5.47e-06 2.82e-06 1.78e-06 2.02e-06 2.04e-06 1.1e-06 9.9e-07 1.83e-05 1.82e-06 1.76e-07 8.04e-07 1.73e-06 1.6e-06 6.92e-07 4.47e-07