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Genes within 1Mb (chr1:30727627:A:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -569161 sc-eQTL 9.21e-01 -0.0076 0.0765 0.449 B L1
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 1.48e-01 -0.0885 0.061 0.449 B L1
ENSG00000134644 PUM1 -338364 sc-eQTL 4.64e-01 0.0376 0.0514 0.449 B L1
ENSG00000162510 MATN1 4042 sc-eQTL 2.43e-02 -0.121 0.0534 0.449 B L1
ENSG00000162511 LAPTM5 -30147 sc-eQTL 1.95e-01 0.0548 0.0422 0.449 B L1
ENSG00000162517 PEF1 -917269 sc-eQTL 6.91e-01 -0.0254 0.0639 0.449 B L1
ENSG00000186056 MATN1-AS1 9123 sc-eQTL 7.80e-01 -0.0139 0.0496 0.449 B L1
ENSG00000287510 AL137857.1 -4066 sc-eQTL 4.29e-01 0.0465 0.0586 0.449 B L1
ENSG00000060688 SNRNP40 -569161 sc-eQTL 2.00e-01 -0.0842 0.0655 0.449 CD4T L1
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 9.94e-01 0.000366 0.0514 0.449 CD4T L1
ENSG00000134644 PUM1 -338364 sc-eQTL 6.13e-01 0.0232 0.0457 0.449 CD4T L1
ENSG00000162511 LAPTM5 -30147 sc-eQTL 4.80e-03 0.142 0.0498 0.449 CD4T L1
ENSG00000162517 PEF1 -917269 sc-eQTL 4.29e-01 0.042 0.053 0.449 CD4T L1
ENSG00000186056 MATN1-AS1 9123 sc-eQTL 8.42e-01 -0.00903 0.0454 0.449 CD4T L1
ENSG00000287510 AL137857.1 -4066 sc-eQTL 1.51e-01 -0.0779 0.0541 0.449 CD4T L1
ENSG00000060688 SNRNP40 -569161 sc-eQTL 7.14e-01 -0.0319 0.087 0.449 CD8T L1
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 1.04e-01 -0.094 0.0576 0.449 CD8T L1
ENSG00000134644 PUM1 -338364 sc-eQTL 5.57e-02 0.0973 0.0506 0.449 CD8T L1
ENSG00000162511 LAPTM5 -30147 sc-eQTL 9.65e-03 0.127 0.0488 0.449 CD8T L1
ENSG00000162517 PEF1 -917269 sc-eQTL 6.07e-01 0.0314 0.061 0.449 CD8T L1
ENSG00000186056 MATN1-AS1 9123 sc-eQTL 8.56e-01 0.0105 0.0581 0.449 CD8T L1
ENSG00000287510 AL137857.1 -4066 sc-eQTL 6.47e-01 0.0334 0.0729 0.449 CD8T L1
ENSG00000060688 SNRNP40 -569161 sc-eQTL 3.67e-01 -0.0699 0.0774 0.457 DC L1
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 3.25e-01 -0.0904 0.0916 0.457 DC L1
ENSG00000134644 PUM1 -338364 sc-eQTL 6.39e-01 -0.0338 0.0719 0.457 DC L1
ENSG00000162511 LAPTM5 -30147 sc-eQTL 5.76e-02 0.0972 0.0509 0.457 DC L1
ENSG00000162517 PEF1 -917269 sc-eQTL 6.86e-01 0.0337 0.0832 0.457 DC L1
ENSG00000168528 SERINC2 -681938 sc-eQTL 7.52e-01 0.0268 0.0847 0.457 DC L1
ENSG00000284543 LINC01226 -778599 sc-eQTL 7.53e-01 0.0177 0.0561 0.457 DC L1
ENSG00000287510 AL137857.1 -4066 sc-eQTL 9.02e-01 0.0101 0.0812 0.457 DC L1
ENSG00000060688 SNRNP40 -569161 sc-eQTL 1.44e-01 0.0866 0.059 0.449 Mono L1
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 6.17e-01 -0.0368 0.0735 0.449 Mono L1
ENSG00000134644 PUM1 -338364 sc-eQTL 3.62e-01 0.043 0.047 0.449 Mono L1
ENSG00000162511 LAPTM5 -30147 sc-eQTL 5.01e-01 -0.0292 0.0433 0.449 Mono L1
ENSG00000162512 SDC3 -181131 sc-eQTL 1.57e-01 -0.118 0.0829 0.449 Mono L1
ENSG00000162517 PEF1 -917269 sc-eQTL 3.73e-01 -0.0521 0.0583 0.449 Mono L1
ENSG00000168528 SERINC2 -681938 sc-eQTL 7.99e-01 -0.0227 0.0894 0.449 Mono L1
ENSG00000284543 LINC01226 -778599 sc-eQTL 3.32e-01 -0.0764 0.0786 0.449 Mono L1
ENSG00000287510 AL137857.1 -4066 sc-eQTL 3.91e-01 0.0591 0.0687 0.449 Mono L1
ENSG00000060688 SNRNP40 -569161 sc-eQTL 1.75e-03 0.256 0.0806 0.448 NK L1
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 5.24e-02 -0.109 0.056 0.448 NK L1
ENSG00000134644 PUM1 -338364 sc-eQTL 4.11e-01 0.0487 0.0592 0.448 NK L1
ENSG00000162511 LAPTM5 -30147 sc-eQTL 5.14e-04 0.234 0.0663 0.448 NK L1
ENSG00000162517 PEF1 -917269 sc-eQTL 3.37e-01 0.0478 0.0497 0.448 NK L1
ENSG00000186056 MATN1-AS1 9123 sc-eQTL 9.77e-01 0.00221 0.0766 0.448 NK L1
ENSG00000287510 AL137857.1 -4066 sc-eQTL 4.41e-02 0.142 0.0701 0.448 NK L1
ENSG00000060688 SNRNP40 -569161 sc-eQTL 7.20e-02 0.111 0.0615 0.449 Other_T L1
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 2.93e-01 -0.0697 0.0661 0.449 Other_T L1
ENSG00000134644 PUM1 -338364 sc-eQTL 3.81e-02 -0.123 0.059 0.449 Other_T L1
ENSG00000162511 LAPTM5 -30147 sc-eQTL 8.56e-03 0.128 0.048 0.449 Other_T L1
ENSG00000162517 PEF1 -917269 sc-eQTL 8.83e-01 -0.00959 0.0652 0.449 Other_T L1
ENSG00000186056 MATN1-AS1 9123 sc-eQTL 7.43e-01 0.0263 0.08 0.449 Other_T L1
ENSG00000287510 AL137857.1 -4066 sc-eQTL 5.59e-01 -0.0487 0.0832 0.449 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -569161 sc-eQTL 6.80e-01 0.0418 0.101 0.449 B_Activated L2
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 6.04e-01 0.0531 0.102 0.449 B_Activated L2
ENSG00000134644 PUM1 -338364 sc-eQTL 7.87e-01 -0.0256 0.0949 0.449 B_Activated L2
ENSG00000162510 MATN1 4042 sc-eQTL 9.03e-01 -0.0101 0.0829 0.449 B_Activated L2
ENSG00000162511 LAPTM5 -30147 sc-eQTL 7.39e-01 0.0193 0.0578 0.449 B_Activated L2
ENSG00000162517 PEF1 -917269 sc-eQTL 5.91e-01 0.0529 0.0983 0.449 B_Activated L2
ENSG00000186056 MATN1-AS1 9123 sc-eQTL 3.75e-01 0.0829 0.0931 0.449 B_Activated L2
ENSG00000287510 AL137857.1 -4066 sc-eQTL 1.93e-01 -0.107 0.0822 0.449 B_Activated L2
ENSG00000060688 SNRNP40 -569161 sc-eQTL 4.79e-01 -0.0657 0.0926 0.448 B_Intermediate L2
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 9.13e-01 -0.00844 0.0773 0.448 B_Intermediate L2
ENSG00000134644 PUM1 -338364 sc-eQTL 4.77e-01 0.0519 0.0728 0.448 B_Intermediate L2
ENSG00000162510 MATN1 4042 sc-eQTL 7.79e-01 -0.0213 0.0758 0.448 B_Intermediate L2
ENSG00000162511 LAPTM5 -30147 sc-eQTL 8.81e-02 0.0792 0.0462 0.448 B_Intermediate L2
ENSG00000162517 PEF1 -917269 sc-eQTL 6.83e-01 -0.0353 0.0864 0.448 B_Intermediate L2
ENSG00000186056 MATN1-AS1 9123 sc-eQTL 5.28e-01 0.0412 0.0653 0.448 B_Intermediate L2
ENSG00000287510 AL137857.1 -4066 sc-eQTL 4.04e-01 0.0611 0.073 0.448 B_Intermediate L2
ENSG00000060688 SNRNP40 -569161 sc-eQTL 4.67e-01 0.0661 0.0908 0.448 B_Memory L2
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 5.70e-01 -0.0476 0.0837 0.448 B_Memory L2
ENSG00000134644 PUM1 -338364 sc-eQTL 9.53e-01 -0.0043 0.0729 0.448 B_Memory L2
ENSG00000162510 MATN1 4042 sc-eQTL 2.63e-01 -0.0781 0.0695 0.448 B_Memory L2
ENSG00000162511 LAPTM5 -30147 sc-eQTL 7.10e-01 -0.023 0.0618 0.448 B_Memory L2
ENSG00000162517 PEF1 -917269 sc-eQTL 5.26e-01 0.0524 0.0825 0.448 B_Memory L2
ENSG00000186056 MATN1-AS1 9123 sc-eQTL 8.42e-01 -0.0141 0.0707 0.448 B_Memory L2
ENSG00000287510 AL137857.1 -4066 sc-eQTL 5.80e-01 0.0459 0.0828 0.448 B_Memory L2
ENSG00000060688 SNRNP40 -569161 sc-eQTL 3.01e-01 0.0867 0.0836 0.449 B_Naive1 L2
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 9.89e-01 -0.000985 0.0723 0.449 B_Naive1 L2
ENSG00000134644 PUM1 -338364 sc-eQTL 1.02e-01 0.104 0.0634 0.449 B_Naive1 L2
ENSG00000162510 MATN1 4042 sc-eQTL 2.23e-02 -0.147 0.0639 0.449 B_Naive1 L2
ENSG00000162511 LAPTM5 -30147 sc-eQTL 1.72e-01 0.059 0.0431 0.449 B_Naive1 L2
ENSG00000162517 PEF1 -917269 sc-eQTL 9.59e-01 0.00389 0.0762 0.449 B_Naive1 L2
ENSG00000186056 MATN1-AS1 9123 sc-eQTL 6.84e-01 -0.0231 0.0568 0.449 B_Naive1 L2
ENSG00000287510 AL137857.1 -4066 sc-eQTL 1.41e-02 0.171 0.0692 0.449 B_Naive1 L2
ENSG00000060688 SNRNP40 -569161 sc-eQTL 2.55e-02 -0.195 0.0868 0.448 B_Naive2 L2
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 1.73e-03 -0.225 0.0708 0.448 B_Naive2 L2
ENSG00000134644 PUM1 -338364 sc-eQTL 3.03e-01 -0.0731 0.0708 0.448 B_Naive2 L2
ENSG00000162510 MATN1 4042 sc-eQTL 7.03e-02 -0.123 0.0676 0.448 B_Naive2 L2
ENSG00000162511 LAPTM5 -30147 sc-eQTL 4.60e-01 0.0342 0.0462 0.448 B_Naive2 L2
ENSG00000162517 PEF1 -917269 sc-eQTL 4.41e-01 -0.0649 0.084 0.448 B_Naive2 L2
ENSG00000186056 MATN1-AS1 9123 sc-eQTL 8.67e-01 -0.0113 0.0674 0.448 B_Naive2 L2
ENSG00000287510 AL137857.1 -4066 sc-eQTL 2.94e-01 -0.0763 0.0726 0.448 B_Naive2 L2
ENSG00000060688 SNRNP40 -569161 sc-eQTL 6.42e-01 0.0406 0.0873 0.45 CD4_CTL L2
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 5.36e-01 -0.0532 0.0858 0.45 CD4_CTL L2
ENSG00000134644 PUM1 -338364 sc-eQTL 7.78e-01 0.0238 0.0842 0.45 CD4_CTL L2
ENSG00000162511 LAPTM5 -30147 sc-eQTL 2.86e-01 0.0801 0.0749 0.45 CD4_CTL L2
ENSG00000162517 PEF1 -917269 sc-eQTL 7.59e-01 -0.0237 0.077 0.45 CD4_CTL L2
ENSG00000186056 MATN1-AS1 9123 sc-eQTL 4.41e-01 0.0633 0.082 0.45 CD4_CTL L2
ENSG00000287510 AL137857.1 -4066 sc-eQTL 1.16e-01 -0.114 0.072 0.45 CD4_CTL L2
ENSG00000060688 SNRNP40 -569161 sc-eQTL 5.28e-02 -0.134 0.0686 0.449 CD4_Naive L2
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 9.46e-01 0.00414 0.0614 0.449 CD4_Naive L2
ENSG00000134644 PUM1 -338364 sc-eQTL 9.23e-01 0.00475 0.049 0.449 CD4_Naive L2
ENSG00000162511 LAPTM5 -30147 sc-eQTL 8.41e-03 0.137 0.0517 0.449 CD4_Naive L2
ENSG00000162517 PEF1 -917269 sc-eQTL 8.15e-01 -0.0135 0.0576 0.449 CD4_Naive L2
ENSG00000186056 MATN1-AS1 9123 sc-eQTL 3.23e-01 -0.0527 0.0532 0.449 CD4_Naive L2
ENSG00000287510 AL137857.1 -4066 sc-eQTL 8.92e-01 -0.00834 0.0612 0.449 CD4_Naive L2
ENSG00000060688 SNRNP40 -569161 sc-eQTL 6.23e-01 -0.0425 0.0863 0.449 CD4_TCM L2
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 7.47e-01 -0.0224 0.0696 0.449 CD4_TCM L2
ENSG00000134644 PUM1 -338364 sc-eQTL 1.31e-01 0.0928 0.0613 0.449 CD4_TCM L2
ENSG00000162511 LAPTM5 -30147 sc-eQTL 1.63e-04 0.19 0.0494 0.449 CD4_TCM L2
ENSG00000162517 PEF1 -917269 sc-eQTL 4.28e-01 0.0544 0.0684 0.449 CD4_TCM L2
ENSG00000186056 MATN1-AS1 9123 sc-eQTL 8.85e-01 0.00936 0.0648 0.449 CD4_TCM L2
ENSG00000287510 AL137857.1 -4066 sc-eQTL 5.41e-01 -0.0442 0.0722 0.449 CD4_TCM L2
ENSG00000060688 SNRNP40 -569161 sc-eQTL 7.25e-01 -0.0304 0.0864 0.449 CD4_TEM L2
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 9.14e-01 0.00888 0.0824 0.449 CD4_TEM L2
ENSG00000134644 PUM1 -338364 sc-eQTL 1.06e-01 0.111 0.0682 0.449 CD4_TEM L2
ENSG00000162511 LAPTM5 -30147 sc-eQTL 3.29e-03 0.202 0.068 0.449 CD4_TEM L2
ENSG00000162517 PEF1 -917269 sc-eQTL 6.83e-01 0.0318 0.0777 0.449 CD4_TEM L2
ENSG00000186056 MATN1-AS1 9123 sc-eQTL 6.10e-01 0.0414 0.0811 0.449 CD4_TEM L2
ENSG00000287510 AL137857.1 -4066 sc-eQTL 1.08e-01 -0.128 0.0795 0.449 CD4_TEM L2
ENSG00000060688 SNRNP40 -569161 sc-eQTL 1.80e-01 -0.125 0.0929 0.449 CD8_CTL L2
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 5.63e-02 -0.136 0.0709 0.449 CD8_CTL L2
ENSG00000134644 PUM1 -338364 sc-eQTL 3.19e-02 0.148 0.0687 0.449 CD8_CTL L2
ENSG00000162511 LAPTM5 -30147 sc-eQTL 1.77e-01 0.104 0.0766 0.449 CD8_CTL L2
ENSG00000162517 PEF1 -917269 sc-eQTL 5.98e-01 0.0354 0.0669 0.449 CD8_CTL L2
ENSG00000186056 MATN1-AS1 9123 sc-eQTL 3.02e-01 -0.0834 0.0807 0.449 CD8_CTL L2
ENSG00000287510 AL137857.1 -4066 sc-eQTL 7.80e-01 0.0213 0.076 0.449 CD8_CTL L2
ENSG00000060688 SNRNP40 -569161 sc-eQTL 8.89e-01 -0.012 0.0862 0.449 CD8_Naive L2
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 7.53e-01 -0.0234 0.0743 0.449 CD8_Naive L2
ENSG00000134644 PUM1 -338364 sc-eQTL 4.06e-01 0.0497 0.0597 0.449 CD8_Naive L2
ENSG00000162511 LAPTM5 -30147 sc-eQTL 3.51e-04 0.202 0.0556 0.449 CD8_Naive L2
ENSG00000162517 PEF1 -917269 sc-eQTL 8.21e-01 -0.0181 0.0797 0.449 CD8_Naive L2
ENSG00000186056 MATN1-AS1 9123 sc-eQTL 5.58e-01 0.042 0.0715 0.449 CD8_Naive L2
ENSG00000287510 AL137857.1 -4066 sc-eQTL 9.04e-01 0.00945 0.0779 0.449 CD8_Naive L2
ENSG00000060688 SNRNP40 -569161 sc-eQTL 9.49e-01 0.00622 0.097 0.451 CD8_TCM L2
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 9.08e-01 0.0103 0.0889 0.451 CD8_TCM L2
ENSG00000134644 PUM1 -338364 sc-eQTL 5.03e-01 0.056 0.0835 0.451 CD8_TCM L2
ENSG00000162511 LAPTM5 -30147 sc-eQTL 2.47e-01 0.101 0.0871 0.451 CD8_TCM L2
ENSG00000162517 PEF1 -917269 sc-eQTL 8.10e-01 -0.0215 0.0894 0.451 CD8_TCM L2
ENSG00000186056 MATN1-AS1 9123 sc-eQTL 3.63e-01 -0.0736 0.0808 0.451 CD8_TCM L2
ENSG00000287510 AL137857.1 -4066 sc-eQTL 7.28e-01 0.0285 0.0818 0.451 CD8_TCM L2
ENSG00000060688 SNRNP40 -569161 sc-eQTL 1.15e-01 0.145 0.0914 0.447 CD8_TEM L2
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 7.06e-01 0.0333 0.0881 0.447 CD8_TEM L2
ENSG00000134644 PUM1 -338364 sc-eQTL 8.84e-01 -0.0132 0.0901 0.447 CD8_TEM L2
ENSG00000162511 LAPTM5 -30147 sc-eQTL 5.27e-01 0.0536 0.0846 0.447 CD8_TEM L2
ENSG00000162517 PEF1 -917269 sc-eQTL 8.49e-01 0.0152 0.0798 0.447 CD8_TEM L2
ENSG00000186056 MATN1-AS1 9123 sc-eQTL 3.60e-01 -0.0805 0.0878 0.447 CD8_TEM L2
ENSG00000287510 AL137857.1 -4066 sc-eQTL 8.02e-01 -0.0199 0.0796 0.447 CD8_TEM L2
ENSG00000060688 SNRNP40 -569161 sc-eQTL 2.10e-01 0.114 0.0904 0.45 MAIT L2
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 4.28e-01 0.0638 0.0803 0.45 MAIT L2
ENSG00000134644 PUM1 -338364 sc-eQTL 4.00e-01 -0.0649 0.077 0.45 MAIT L2
ENSG00000162511 LAPTM5 -30147 sc-eQTL 3.02e-03 0.214 0.0712 0.45 MAIT L2
ENSG00000162517 PEF1 -917269 sc-eQTL 8.74e-01 0.0127 0.0799 0.45 MAIT L2
ENSG00000186056 MATN1-AS1 9123 sc-eQTL 8.79e-01 0.0123 0.081 0.45 MAIT L2
ENSG00000287510 AL137857.1 -4066 sc-eQTL 1.75e-01 -0.113 0.0831 0.45 MAIT L2
ENSG00000060688 SNRNP40 -569161 sc-eQTL 1.65e-01 0.13 0.093 0.456 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 1.53e-02 -0.19 0.0778 0.456 NK_CD56bright L2
ENSG00000134644 PUM1 -338364 sc-eQTL 5.55e-01 0.049 0.0828 0.456 NK_CD56bright L2
ENSG00000162511 LAPTM5 -30147 sc-eQTL 2.90e-02 0.178 0.0808 0.456 NK_CD56bright L2
ENSG00000162517 PEF1 -917269 sc-eQTL 5.06e-01 -0.0528 0.0793 0.456 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 9123 sc-eQTL 4.15e-01 -0.067 0.082 0.456 NK_CD56bright L2
ENSG00000287510 AL137857.1 -4066 sc-eQTL 6.18e-01 0.0404 0.0809 0.456 NK_CD56bright L2
ENSG00000060688 SNRNP40 -569161 sc-eQTL 1.28e-01 0.133 0.0869 0.45 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 1.56e-01 -0.0916 0.0643 0.45 NK_CD56dim L2
ENSG00000134644 PUM1 -338364 sc-eQTL 5.74e-01 0.0373 0.0663 0.45 NK_CD56dim L2
ENSG00000162511 LAPTM5 -30147 sc-eQTL 3.17e-03 0.207 0.0693 0.45 NK_CD56dim L2
ENSG00000162517 PEF1 -917269 sc-eQTL 3.10e-01 0.0639 0.0628 0.45 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 9123 sc-eQTL 6.84e-01 0.0361 0.0886 0.45 NK_CD56dim L2
ENSG00000287510 AL137857.1 -4066 sc-eQTL 5.33e-02 0.141 0.0725 0.45 NK_CD56dim L2
ENSG00000060688 SNRNP40 -569161 sc-eQTL 2.75e-01 0.103 0.0937 0.454 NK_HLA L2
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 9.25e-01 0.00793 0.0839 0.454 NK_HLA L2
ENSG00000134644 PUM1 -338364 sc-eQTL 1.86e-01 -0.108 0.0814 0.454 NK_HLA L2
ENSG00000162511 LAPTM5 -30147 sc-eQTL 1.96e-03 0.239 0.0762 0.454 NK_HLA L2
ENSG00000162517 PEF1 -917269 sc-eQTL 3.06e-01 -0.09 0.0877 0.454 NK_HLA L2
ENSG00000186056 MATN1-AS1 9123 sc-eQTL 7.37e-01 -0.0279 0.083 0.454 NK_HLA L2
ENSG00000287510 AL137857.1 -4066 sc-eQTL 4.22e-03 0.228 0.0786 0.454 NK_HLA L2
ENSG00000060688 SNRNP40 -569161 sc-eQTL 3.46e-02 0.18 0.0848 0.45 NK_cytokine L2
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 6.72e-01 -0.0284 0.0669 0.45 NK_cytokine L2
ENSG00000134644 PUM1 -338364 sc-eQTL 2.84e-01 0.0775 0.0722 0.45 NK_cytokine L2
ENSG00000162511 LAPTM5 -30147 sc-eQTL 2.19e-02 0.182 0.0787 0.45 NK_cytokine L2
ENSG00000162517 PEF1 -917269 sc-eQTL 4.09e-01 0.0561 0.0678 0.45 NK_cytokine L2
ENSG00000186056 MATN1-AS1 9123 sc-eQTL 3.69e-01 0.0758 0.0843 0.45 NK_cytokine L2
ENSG00000287510 AL137857.1 -4066 sc-eQTL 4.66e-01 0.0573 0.0785 0.45 NK_cytokine L2
ENSG00000060688 SNRNP40 -569161 sc-eQTL 4.41e-01 0.0788 0.102 0.433 PB L2
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 7.25e-01 -0.0419 0.119 0.433 PB L2
ENSG00000134644 PUM1 -338364 sc-eQTL 6.52e-01 -0.0465 0.103 0.433 PB L2
ENSG00000162510 MATN1 4042 sc-eQTL 7.92e-01 -0.0254 0.0961 0.433 PB L2
ENSG00000162511 LAPTM5 -30147 sc-eQTL 6.54e-01 0.0308 0.0686 0.433 PB L2
ENSG00000162517 PEF1 -917269 sc-eQTL 7.02e-01 -0.0405 0.106 0.433 PB L2
ENSG00000186056 MATN1-AS1 9123 sc-eQTL 2.53e-01 0.107 0.0934 0.433 PB L2
ENSG00000287510 AL137857.1 -4066 sc-eQTL 6.59e-01 -0.0442 0.0999 0.433 PB L2
ENSG00000060688 SNRNP40 -569161 sc-eQTL 8.23e-01 -0.0152 0.0676 0.446 Pro_T L2
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 6.53e-03 -0.232 0.0843 0.446 Pro_T L2
ENSG00000134644 PUM1 -338364 sc-eQTL 8.79e-01 -0.0122 0.0801 0.446 Pro_T L2
ENSG00000162511 LAPTM5 -30147 sc-eQTL 8.72e-01 0.00923 0.0574 0.446 Pro_T L2
ENSG00000162517 PEF1 -917269 sc-eQTL 1.15e-02 -0.212 0.083 0.446 Pro_T L2
ENSG00000186056 MATN1-AS1 9123 sc-eQTL 9.63e-01 0.00373 0.0803 0.446 Pro_T L2
ENSG00000287510 AL137857.1 -4066 sc-eQTL 5.55e-01 -0.0436 0.0738 0.446 Pro_T L2
ENSG00000060688 SNRNP40 -569161 sc-eQTL 1.06e-01 0.143 0.0878 0.449 Treg L2
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 7.89e-02 0.15 0.0849 0.449 Treg L2
ENSG00000134644 PUM1 -338364 sc-eQTL 9.89e-01 -0.000985 0.0684 0.449 Treg L2
ENSG00000162511 LAPTM5 -30147 sc-eQTL 1.16e-02 0.197 0.0772 0.449 Treg L2
ENSG00000162517 PEF1 -917269 sc-eQTL 8.18e-01 -0.0195 0.0846 0.449 Treg L2
ENSG00000186056 MATN1-AS1 9123 sc-eQTL 4.64e-01 0.0585 0.0797 0.449 Treg L2
ENSG00000287510 AL137857.1 -4066 sc-eQTL 7.89e-01 -0.0214 0.0797 0.449 Treg L2
ENSG00000060688 SNRNP40 -569161 sc-eQTL 8.31e-01 0.0191 0.0893 0.466 cDC L2
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 5.96e-01 -0.0513 0.0966 0.466 cDC L2
ENSG00000134644 PUM1 -338364 sc-eQTL 8.87e-01 -0.0118 0.0831 0.466 cDC L2
ENSG00000162511 LAPTM5 -30147 sc-eQTL 7.17e-02 0.105 0.0577 0.466 cDC L2
ENSG00000162517 PEF1 -917269 sc-eQTL 1.56e-01 0.12 0.0838 0.466 cDC L2
ENSG00000168528 SERINC2 -681938 sc-eQTL 2.74e-01 -0.0818 0.0745 0.466 cDC L2
ENSG00000284543 LINC01226 -778599 sc-eQTL 1.35e-01 0.11 0.073 0.466 cDC L2
ENSG00000287510 AL137857.1 -4066 sc-eQTL 9.27e-01 0.00721 0.0791 0.466 cDC L2
ENSG00000060688 SNRNP40 -569161 sc-eQTL 2.88e-01 0.0769 0.0722 0.449 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 5.55e-01 -0.0477 0.0807 0.449 cMono_IL1B L2
ENSG00000134644 PUM1 -338364 sc-eQTL 5.72e-01 0.0309 0.0546 0.449 cMono_IL1B L2
ENSG00000162511 LAPTM5 -30147 sc-eQTL 4.40e-01 -0.037 0.0479 0.449 cMono_IL1B L2
ENSG00000162512 SDC3 -181131 sc-eQTL 3.50e-01 -0.0844 0.0902 0.449 cMono_IL1B L2
ENSG00000162517 PEF1 -917269 sc-eQTL 9.78e-01 0.00205 0.0738 0.449 cMono_IL1B L2
ENSG00000168528 SERINC2 -681938 sc-eQTL 7.40e-01 0.0303 0.0914 0.449 cMono_IL1B L2
ENSG00000284543 LINC01226 -778599 sc-eQTL 1.81e-01 -0.108 0.0805 0.449 cMono_IL1B L2
ENSG00000287510 AL137857.1 -4066 sc-eQTL 6.41e-01 0.0352 0.0754 0.449 cMono_IL1B L2
ENSG00000060688 SNRNP40 -569161 sc-eQTL 1.05e-01 0.122 0.0748 0.449 cMono_S100A L2
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 8.04e-01 0.0221 0.0889 0.449 cMono_S100A L2
ENSG00000134644 PUM1 -338364 sc-eQTL 9.23e-01 0.00626 0.0643 0.449 cMono_S100A L2
ENSG00000162511 LAPTM5 -30147 sc-eQTL 4.93e-01 -0.0339 0.0494 0.449 cMono_S100A L2
ENSG00000162512 SDC3 -181131 sc-eQTL 4.55e-01 0.0638 0.0852 0.449 cMono_S100A L2
ENSG00000162517 PEF1 -917269 sc-eQTL 8.96e-02 -0.131 0.0765 0.449 cMono_S100A L2
ENSG00000168528 SERINC2 -681938 sc-eQTL 8.80e-01 -0.0137 0.0904 0.449 cMono_S100A L2
ENSG00000284543 LINC01226 -778599 sc-eQTL 1.43e-01 -0.107 0.073 0.449 cMono_S100A L2
ENSG00000287510 AL137857.1 -4066 sc-eQTL 8.64e-01 0.0126 0.0737 0.449 cMono_S100A L2
ENSG00000060688 SNRNP40 -569161 sc-eQTL 7.50e-01 -0.0357 0.112 0.448 gdT L2
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 6.86e-01 0.0388 0.0958 0.448 gdT L2
ENSG00000134644 PUM1 -338364 sc-eQTL 6.76e-01 -0.0414 0.0987 0.448 gdT L2
ENSG00000162511 LAPTM5 -30147 sc-eQTL 6.57e-01 0.0477 0.107 0.448 gdT L2
ENSG00000162517 PEF1 -917269 sc-eQTL 8.01e-01 0.0248 0.0982 0.448 gdT L2
ENSG00000186056 MATN1-AS1 9123 sc-eQTL 9.70e-01 0.00369 0.0991 0.448 gdT L2
ENSG00000287510 AL137857.1 -4066 sc-eQTL 2.11e-01 -0.12 0.0955 0.448 gdT L2
ENSG00000060688 SNRNP40 -569161 sc-eQTL 1.45e-01 0.124 0.0845 0.453 intMono L2
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 8.56e-01 -0.0166 0.0913 0.453 intMono L2
ENSG00000134644 PUM1 -338364 sc-eQTL 5.60e-01 -0.0452 0.0774 0.453 intMono L2
ENSG00000162511 LAPTM5 -30147 sc-eQTL 2.17e-01 0.075 0.0605 0.453 intMono L2
ENSG00000162512 SDC3 -181131 sc-eQTL 1.08e-01 -0.134 0.0827 0.453 intMono L2
ENSG00000162517 PEF1 -917269 sc-eQTL 1.61e-01 0.122 0.087 0.453 intMono L2
ENSG00000168528 SERINC2 -681938 sc-eQTL 6.08e-01 -0.0447 0.087 0.453 intMono L2
ENSG00000284543 LINC01226 -778599 sc-eQTL 6.51e-01 0.0374 0.0825 0.453 intMono L2
ENSG00000287510 AL137857.1 -4066 sc-eQTL 7.37e-01 0.0278 0.0825 0.453 intMono L2
ENSG00000060688 SNRNP40 -569161 sc-eQTL 3.38e-01 0.0768 0.0799 0.452 ncMono L2
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 3.08e-01 0.087 0.0852 0.452 ncMono L2
ENSG00000134644 PUM1 -338364 sc-eQTL 3.33e-01 0.0676 0.0696 0.452 ncMono L2
ENSG00000162511 LAPTM5 -30147 sc-eQTL 6.13e-01 0.0321 0.0633 0.452 ncMono L2
ENSG00000162512 SDC3 -181131 sc-eQTL 2.66e-01 -0.079 0.0708 0.452 ncMono L2
ENSG00000162517 PEF1 -917269 sc-eQTL 3.88e-01 0.0704 0.0813 0.452 ncMono L2
ENSG00000168528 SERINC2 -681938 sc-eQTL 4.13e-01 0.0636 0.0774 0.452 ncMono L2
ENSG00000284543 LINC01226 -778599 sc-eQTL 6.99e-01 0.03 0.0775 0.452 ncMono L2
ENSG00000287510 AL137857.1 -4066 sc-eQTL 4.17e-01 -0.0653 0.0802 0.452 ncMono L2
ENSG00000060688 SNRNP40 -569161 sc-eQTL 3.52e-01 -0.0824 0.0882 0.472 pDC L2
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 8.34e-01 -0.0204 0.0971 0.472 pDC L2
ENSG00000134644 PUM1 -338364 sc-eQTL 4.48e-01 0.0611 0.0803 0.472 pDC L2
ENSG00000162511 LAPTM5 -30147 sc-eQTL 8.54e-01 0.0138 0.0748 0.472 pDC L2
ENSG00000162517 PEF1 -917269 sc-eQTL 6.75e-01 0.0408 0.097 0.472 pDC L2
ENSG00000168528 SERINC2 -681938 sc-eQTL 4.89e-01 0.0628 0.0906 0.472 pDC L2
ENSG00000284543 LINC01226 -778599 sc-eQTL 3.93e-01 -0.0602 0.0703 0.472 pDC L2
ENSG00000287510 AL137857.1 -4066 sc-eQTL 6.00e-01 -0.0435 0.0828 0.472 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -569161 sc-eQTL 8.74e-01 0.0141 0.0883 0.449 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 7.33e-01 -0.0251 0.0735 0.449 B_Memory LOneK1K
ENSG00000134644 PUM1 -338364 sc-eQTL 7.20e-01 0.0234 0.0651 0.449 B_Memory LOneK1K
ENSG00000162510 MATN1 4042 sc-eQTL 6.85e-01 -0.0302 0.0742 0.449 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -30147 sc-eQTL 1.56e-01 0.066 0.0464 0.449 B_Memory LOneK1K
ENSG00000162517 PEF1 -917269 sc-eQTL 7.59e-01 -0.0237 0.0773 0.449 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 9123 sc-eQTL 7.32e-01 0.0212 0.0617 0.449 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -4066 sc-eQTL 8.43e-01 0.0133 0.0672 0.449 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -569161 sc-eQTL 5.74e-01 -0.0458 0.0812 0.449 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 1.14e-01 -0.101 0.0639 0.449 B_Naive LOneK1K
ENSG00000134644 PUM1 -338364 sc-eQTL 4.40e-01 0.047 0.0607 0.449 B_Naive LOneK1K
ENSG00000162510 MATN1 4042 sc-eQTL 1.55e-02 -0.141 0.0577 0.449 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -30147 sc-eQTL 2.34e-01 0.049 0.0411 0.449 B_Naive LOneK1K
ENSG00000162517 PEF1 -917269 sc-eQTL 5.73e-01 -0.0425 0.0752 0.449 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 9123 sc-eQTL 5.47e-01 -0.0321 0.0532 0.449 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -4066 sc-eQTL 3.37e-01 0.0607 0.0631 0.449 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -569161 sc-eQTL 1.27e-01 0.104 0.068 0.449 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 7.81e-01 -0.0215 0.0774 0.449 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -338364 sc-eQTL 3.91e-01 0.0424 0.0493 0.449 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -30147 sc-eQTL 2.72e-01 -0.0477 0.0433 0.449 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -181131 sc-eQTL 7.56e-01 -0.0276 0.0885 0.449 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -917269 sc-eQTL 2.99e-01 -0.0646 0.0621 0.449 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -681938 sc-eQTL 9.68e-01 0.00371 0.0911 0.449 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -778599 sc-eQTL 1.42e-01 -0.11 0.0743 0.449 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -4066 sc-eQTL 4.82e-01 0.0492 0.0698 0.449 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -569161 sc-eQTL 7.28e-02 0.134 0.0742 0.45 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 9.30e-01 -0.00722 0.0819 0.45 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -338364 sc-eQTL 8.96e-01 -0.00878 0.0671 0.45 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -30147 sc-eQTL 6.52e-01 0.0242 0.0536 0.45 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -181131 sc-eQTL 2.20e-02 -0.179 0.0774 0.45 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -917269 sc-eQTL 7.68e-01 0.0211 0.0712 0.45 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -681938 sc-eQTL 7.08e-01 -0.0305 0.0812 0.45 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -778599 sc-eQTL 8.12e-01 0.0184 0.0771 0.45 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -4066 sc-eQTL 7.09e-01 0.0288 0.0772 0.45 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -569161 sc-eQTL 1.70e-03 0.258 0.0811 0.45 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -569355 sc-eQTL 2.35e-01 -0.0672 0.0565 0.45 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -338364 sc-eQTL 4.04e-01 0.0519 0.062 0.45 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -30147 sc-eQTL 7.01e-04 0.232 0.0675 0.45 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -917269 sc-eQTL 2.36e-01 0.0625 0.0526 0.45 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 9123 sc-eQTL 8.41e-01 0.0161 0.0801 0.45 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -4066 sc-eQTL 3.94e-02 0.142 0.0684 0.45 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162511 LAPTM5 -30147 eQTL 0.0273 -0.0214 0.00967 0.0 0.0 0.475
ENSG00000168528 SERINC2 -681938 eQTL 0.0262 0.0832 0.0374 0.0 0.0 0.475

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina