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Genes within 1Mb (chr1:30725066:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -571722 sc-eQTL 9.67e-02 -0.14 0.0841 0.303 B L1
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 3.67e-01 -0.0611 0.0677 0.303 B L1
ENSG00000134644 PUM1 -340925 sc-eQTL 6.68e-01 -0.0244 0.0568 0.303 B L1
ENSG00000162510 MATN1 1481 sc-eQTL 9.55e-01 0.00336 0.0598 0.303 B L1
ENSG00000162511 LAPTM5 -32708 sc-eQTL 3.79e-01 0.0412 0.0467 0.303 B L1
ENSG00000162517 PEF1 -919830 sc-eQTL 9.64e-01 0.00321 0.0707 0.303 B L1
ENSG00000186056 MATN1-AS1 6562 sc-eQTL 1.45e-01 -0.0799 0.0546 0.303 B L1
ENSG00000287510 AL137857.1 -6627 sc-eQTL 9.36e-02 -0.109 0.0645 0.303 B L1
ENSG00000060688 SNRNP40 -571722 sc-eQTL 1.36e-01 0.108 0.0719 0.303 CD4T L1
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 5.14e-01 -0.0369 0.0564 0.303 CD4T L1
ENSG00000134644 PUM1 -340925 sc-eQTL 9.18e-01 -0.00517 0.0503 0.303 CD4T L1
ENSG00000162511 LAPTM5 -32708 sc-eQTL 5.29e-01 0.0351 0.0557 0.303 CD4T L1
ENSG00000162517 PEF1 -919830 sc-eQTL 5.95e-01 -0.031 0.0582 0.303 CD4T L1
ENSG00000186056 MATN1-AS1 6562 sc-eQTL 4.93e-01 -0.0342 0.0498 0.303 CD4T L1
ENSG00000287510 AL137857.1 -6627 sc-eQTL 3.64e-01 -0.0543 0.0596 0.303 CD4T L1
ENSG00000060688 SNRNP40 -571722 sc-eQTL 8.02e-01 -0.0242 0.0966 0.303 CD8T L1
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 7.38e-01 0.0215 0.0643 0.303 CD8T L1
ENSG00000134644 PUM1 -340925 sc-eQTL 9.03e-01 -0.00691 0.0566 0.303 CD8T L1
ENSG00000162511 LAPTM5 -32708 sc-eQTL 1.42e-01 0.0805 0.0547 0.303 CD8T L1
ENSG00000162517 PEF1 -919830 sc-eQTL 2.89e-01 -0.0718 0.0675 0.303 CD8T L1
ENSG00000186056 MATN1-AS1 6562 sc-eQTL 7.62e-01 -0.0196 0.0644 0.303 CD8T L1
ENSG00000287510 AL137857.1 -6627 sc-eQTL 9.02e-01 -0.00998 0.0809 0.303 CD8T L1
ENSG00000060688 SNRNP40 -571722 sc-eQTL 1.35e-01 -0.13 0.0866 0.309 DC L1
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 9.41e-01 0.00766 0.103 0.309 DC L1
ENSG00000134644 PUM1 -340925 sc-eQTL 9.25e-02 0.136 0.0802 0.309 DC L1
ENSG00000162511 LAPTM5 -32708 sc-eQTL 7.54e-01 0.0181 0.0577 0.309 DC L1
ENSG00000162517 PEF1 -919830 sc-eQTL 8.78e-01 -0.0144 0.0935 0.309 DC L1
ENSG00000168528 SERINC2 -684499 sc-eQTL 7.08e-01 -0.0357 0.0951 0.309 DC L1
ENSG00000284543 LINC01226 -781160 sc-eQTL 1.53e-01 0.0898 0.0627 0.309 DC L1
ENSG00000287510 AL137857.1 -6627 sc-eQTL 1.42e-01 -0.134 0.0907 0.309 DC L1
ENSG00000060688 SNRNP40 -571722 sc-eQTL 5.87e-01 -0.0362 0.0666 0.303 Mono L1
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 2.97e-01 -0.0862 0.0824 0.303 Mono L1
ENSG00000134644 PUM1 -340925 sc-eQTL 9.47e-01 -0.00351 0.0529 0.303 Mono L1
ENSG00000162511 LAPTM5 -32708 sc-eQTL 8.52e-01 0.00912 0.0487 0.303 Mono L1
ENSG00000162512 SDC3 -183692 sc-eQTL 2.83e-01 -0.1 0.0934 0.303 Mono L1
ENSG00000162517 PEF1 -919830 sc-eQTL 3.66e-01 -0.0593 0.0655 0.303 Mono L1
ENSG00000168528 SERINC2 -684499 sc-eQTL 1.91e-01 -0.131 0.1 0.303 Mono L1
ENSG00000284543 LINC01226 -781160 sc-eQTL 1.71e-02 0.21 0.0873 0.303 Mono L1
ENSG00000287510 AL137857.1 -6627 sc-eQTL 3.49e-01 0.0724 0.0772 0.303 Mono L1
ENSG00000060688 SNRNP40 -571722 sc-eQTL 8.76e-01 -0.0143 0.0918 0.305 NK L1
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 2.50e-01 -0.0723 0.0627 0.305 NK L1
ENSG00000134644 PUM1 -340925 sc-eQTL 7.17e-01 0.0239 0.0659 0.305 NK L1
ENSG00000162511 LAPTM5 -32708 sc-eQTL 2.58e-01 -0.0859 0.0757 0.305 NK L1
ENSG00000162517 PEF1 -919830 sc-eQTL 5.53e-01 -0.0329 0.0554 0.305 NK L1
ENSG00000186056 MATN1-AS1 6562 sc-eQTL 5.18e-01 0.0551 0.0852 0.305 NK L1
ENSG00000287510 AL137857.1 -6627 sc-eQTL 7.70e-01 -0.0231 0.0787 0.305 NK L1
ENSG00000060688 SNRNP40 -571722 sc-eQTL 4.58e-01 -0.0514 0.0692 0.303 Other_T L1
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 9.52e-01 0.00446 0.074 0.303 Other_T L1
ENSG00000134644 PUM1 -340925 sc-eQTL 3.44e-01 -0.063 0.0664 0.303 Other_T L1
ENSG00000162511 LAPTM5 -32708 sc-eQTL 4.76e-02 0.108 0.0541 0.303 Other_T L1
ENSG00000162517 PEF1 -919830 sc-eQTL 2.64e-02 0.161 0.072 0.303 Other_T L1
ENSG00000186056 MATN1-AS1 6562 sc-eQTL 6.91e-01 0.0356 0.0893 0.303 Other_T L1
ENSG00000287510 AL137857.1 -6627 sc-eQTL 2.50e-01 -0.107 0.0928 0.303 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -571722 sc-eQTL 2.29e-01 0.129 0.107 0.316 B_Activated L2
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 2.32e-01 0.13 0.108 0.316 B_Activated L2
ENSG00000134644 PUM1 -340925 sc-eQTL 8.38e-01 -0.0206 0.101 0.316 B_Activated L2
ENSG00000162510 MATN1 1481 sc-eQTL 1.21e-01 -0.137 0.0876 0.316 B_Activated L2
ENSG00000162511 LAPTM5 -32708 sc-eQTL 5.37e-01 -0.038 0.0615 0.316 B_Activated L2
ENSG00000162517 PEF1 -919830 sc-eQTL 9.89e-01 -0.00149 0.105 0.316 B_Activated L2
ENSG00000186056 MATN1-AS1 6562 sc-eQTL 8.69e-01 -0.0164 0.0993 0.316 B_Activated L2
ENSG00000287510 AL137857.1 -6627 sc-eQTL 1.60e-02 -0.21 0.0864 0.316 B_Activated L2
ENSG00000060688 SNRNP40 -571722 sc-eQTL 6.51e-01 0.047 0.104 0.305 B_Intermediate L2
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 7.27e-01 -0.0301 0.0863 0.305 B_Intermediate L2
ENSG00000134644 PUM1 -340925 sc-eQTL 7.96e-01 -0.0211 0.0815 0.305 B_Intermediate L2
ENSG00000162510 MATN1 1481 sc-eQTL 2.96e-02 0.184 0.0838 0.305 B_Intermediate L2
ENSG00000162511 LAPTM5 -32708 sc-eQTL 9.15e-01 0.00553 0.052 0.305 B_Intermediate L2
ENSG00000162517 PEF1 -919830 sc-eQTL 7.90e-01 0.0258 0.0966 0.305 B_Intermediate L2
ENSG00000186056 MATN1-AS1 6562 sc-eQTL 9.45e-01 -0.00501 0.073 0.305 B_Intermediate L2
ENSG00000287510 AL137857.1 -6627 sc-eQTL 1.46e-01 -0.119 0.0813 0.305 B_Intermediate L2
ENSG00000060688 SNRNP40 -571722 sc-eQTL 4.99e-01 -0.0682 0.101 0.304 B_Memory L2
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 4.07e-01 0.0771 0.0927 0.304 B_Memory L2
ENSG00000134644 PUM1 -340925 sc-eQTL 2.66e-01 0.0899 0.0806 0.304 B_Memory L2
ENSG00000162510 MATN1 1481 sc-eQTL 9.77e-02 0.128 0.0768 0.304 B_Memory L2
ENSG00000162511 LAPTM5 -32708 sc-eQTL 4.76e-01 0.0489 0.0685 0.304 B_Memory L2
ENSG00000162517 PEF1 -919830 sc-eQTL 8.78e-01 0.0141 0.0915 0.304 B_Memory L2
ENSG00000186056 MATN1-AS1 6562 sc-eQTL 8.51e-01 0.0148 0.0784 0.304 B_Memory L2
ENSG00000287510 AL137857.1 -6627 sc-eQTL 3.04e-01 0.0945 0.0916 0.304 B_Memory L2
ENSG00000060688 SNRNP40 -571722 sc-eQTL 3.88e-01 -0.08 0.0924 0.303 B_Naive1 L2
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 8.70e-01 0.0131 0.0799 0.303 B_Naive1 L2
ENSG00000134644 PUM1 -340925 sc-eQTL 1.76e-01 -0.0953 0.0702 0.303 B_Naive1 L2
ENSG00000162510 MATN1 1481 sc-eQTL 8.44e-01 0.0141 0.0715 0.303 B_Naive1 L2
ENSG00000162511 LAPTM5 -32708 sc-eQTL 4.01e-01 0.0402 0.0477 0.303 B_Naive1 L2
ENSG00000162517 PEF1 -919830 sc-eQTL 9.88e-01 0.00132 0.0842 0.303 B_Naive1 L2
ENSG00000186056 MATN1-AS1 6562 sc-eQTL 3.78e-01 -0.0554 0.0627 0.303 B_Naive1 L2
ENSG00000287510 AL137857.1 -6627 sc-eQTL 5.92e-01 -0.0416 0.0775 0.303 B_Naive1 L2
ENSG00000060688 SNRNP40 -571722 sc-eQTL 3.41e-02 -0.208 0.0974 0.303 B_Naive2 L2
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 5.94e-04 -0.276 0.079 0.303 B_Naive2 L2
ENSG00000134644 PUM1 -340925 sc-eQTL 6.41e-01 0.0371 0.0795 0.303 B_Naive2 L2
ENSG00000162510 MATN1 1481 sc-eQTL 6.95e-01 -0.0299 0.0763 0.303 B_Naive2 L2
ENSG00000162511 LAPTM5 -32708 sc-eQTL 5.58e-01 0.0304 0.0518 0.303 B_Naive2 L2
ENSG00000162517 PEF1 -919830 sc-eQTL 2.94e-01 -0.0991 0.0941 0.303 B_Naive2 L2
ENSG00000186056 MATN1-AS1 6562 sc-eQTL 2.79e-01 -0.0817 0.0753 0.303 B_Naive2 L2
ENSG00000287510 AL137857.1 -6627 sc-eQTL 1.75e-01 -0.11 0.0812 0.303 B_Naive2 L2
ENSG00000060688 SNRNP40 -571722 sc-eQTL 8.75e-01 -0.0155 0.0985 0.302 CD4_CTL L2
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 3.95e-01 0.0824 0.0967 0.302 CD4_CTL L2
ENSG00000134644 PUM1 -340925 sc-eQTL 7.45e-01 0.0309 0.095 0.302 CD4_CTL L2
ENSG00000162511 LAPTM5 -32708 sc-eQTL 8.00e-01 0.0215 0.0847 0.302 CD4_CTL L2
ENSG00000162517 PEF1 -919830 sc-eQTL 5.60e-01 0.0507 0.0868 0.302 CD4_CTL L2
ENSG00000186056 MATN1-AS1 6562 sc-eQTL 3.62e-01 0.0844 0.0925 0.302 CD4_CTL L2
ENSG00000287510 AL137857.1 -6627 sc-eQTL 2.87e-01 0.0872 0.0816 0.302 CD4_CTL L2
ENSG00000060688 SNRNP40 -571722 sc-eQTL 9.91e-01 -0.000881 0.0763 0.303 CD4_Naive L2
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 1.96e-01 -0.0874 0.0674 0.303 CD4_Naive L2
ENSG00000134644 PUM1 -340925 sc-eQTL 9.97e-01 -0.0002 0.054 0.303 CD4_Naive L2
ENSG00000162511 LAPTM5 -32708 sc-eQTL 9.58e-01 0.00308 0.0579 0.303 CD4_Naive L2
ENSG00000162517 PEF1 -919830 sc-eQTL 3.23e-01 -0.0627 0.0633 0.303 CD4_Naive L2
ENSG00000186056 MATN1-AS1 6562 sc-eQTL 6.70e-02 -0.107 0.0582 0.303 CD4_Naive L2
ENSG00000287510 AL137857.1 -6627 sc-eQTL 9.74e-01 -0.00217 0.0674 0.303 CD4_Naive L2
ENSG00000060688 SNRNP40 -571722 sc-eQTL 5.54e-02 0.182 0.0946 0.303 CD4_TCM L2
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 6.54e-01 0.0346 0.0769 0.303 CD4_TCM L2
ENSG00000134644 PUM1 -340925 sc-eQTL 9.54e-01 -0.00393 0.0681 0.303 CD4_TCM L2
ENSG00000162511 LAPTM5 -32708 sc-eQTL 1.75e-01 0.0766 0.0562 0.303 CD4_TCM L2
ENSG00000162517 PEF1 -919830 sc-eQTL 9.01e-01 -0.00942 0.0757 0.303 CD4_TCM L2
ENSG00000186056 MATN1-AS1 6562 sc-eQTL 6.93e-01 0.0283 0.0717 0.303 CD4_TCM L2
ENSG00000287510 AL137857.1 -6627 sc-eQTL 2.42e-01 -0.0933 0.0796 0.303 CD4_TCM L2
ENSG00000060688 SNRNP40 -571722 sc-eQTL 2.93e-01 0.099 0.0939 0.303 CD4_TEM L2
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 2.12e-01 0.112 0.0894 0.303 CD4_TEM L2
ENSG00000134644 PUM1 -340925 sc-eQTL 5.59e-01 -0.0437 0.0747 0.303 CD4_TEM L2
ENSG00000162511 LAPTM5 -32708 sc-eQTL 6.98e-01 -0.0293 0.0756 0.303 CD4_TEM L2
ENSG00000162517 PEF1 -919830 sc-eQTL 9.92e-01 0.000816 0.0847 0.303 CD4_TEM L2
ENSG00000186056 MATN1-AS1 6562 sc-eQTL 7.36e-01 -0.0298 0.0884 0.303 CD4_TEM L2
ENSG00000287510 AL137857.1 -6627 sc-eQTL 1.40e-01 0.128 0.0867 0.303 CD4_TEM L2
ENSG00000060688 SNRNP40 -571722 sc-eQTL 8.52e-01 0.0197 0.106 0.303 CD8_CTL L2
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 1.69e-01 -0.111 0.0806 0.303 CD8_CTL L2
ENSG00000134644 PUM1 -340925 sc-eQTL 1.28e-01 0.12 0.0782 0.303 CD8_CTL L2
ENSG00000162511 LAPTM5 -32708 sc-eQTL 8.97e-01 0.0112 0.0871 0.303 CD8_CTL L2
ENSG00000162517 PEF1 -919830 sc-eQTL 9.86e-01 -0.00137 0.0758 0.303 CD8_CTL L2
ENSG00000186056 MATN1-AS1 6562 sc-eQTL 3.53e-01 -0.0851 0.0913 0.303 CD8_CTL L2
ENSG00000287510 AL137857.1 -6627 sc-eQTL 8.17e-01 -0.0199 0.0861 0.303 CD8_CTL L2
ENSG00000060688 SNRNP40 -571722 sc-eQTL 7.45e-01 0.0307 0.0944 0.303 CD8_Naive L2
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 2.40e-01 0.0956 0.0811 0.303 CD8_Naive L2
ENSG00000134644 PUM1 -340925 sc-eQTL 1.19e-01 -0.102 0.0651 0.303 CD8_Naive L2
ENSG00000162511 LAPTM5 -32708 sc-eQTL 1.49e-01 0.0904 0.0625 0.303 CD8_Naive L2
ENSG00000162517 PEF1 -919830 sc-eQTL 7.07e-01 -0.0328 0.0872 0.303 CD8_Naive L2
ENSG00000186056 MATN1-AS1 6562 sc-eQTL 9.99e-01 -9.92e-05 0.0784 0.303 CD8_Naive L2
ENSG00000287510 AL137857.1 -6627 sc-eQTL 2.10e-01 0.107 0.085 0.303 CD8_Naive L2
ENSG00000060688 SNRNP40 -571722 sc-eQTL 3.40e-01 0.101 0.106 0.296 CD8_TCM L2
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 9.55e-01 0.00553 0.0971 0.296 CD8_TCM L2
ENSG00000134644 PUM1 -340925 sc-eQTL 6.45e-01 -0.0421 0.0913 0.296 CD8_TCM L2
ENSG00000162511 LAPTM5 -32708 sc-eQTL 6.49e-01 -0.0436 0.0955 0.296 CD8_TCM L2
ENSG00000162517 PEF1 -919830 sc-eQTL 1.76e-01 -0.132 0.0972 0.296 CD8_TCM L2
ENSG00000186056 MATN1-AS1 6562 sc-eQTL 4.03e-01 0.0741 0.0883 0.296 CD8_TCM L2
ENSG00000287510 AL137857.1 -6627 sc-eQTL 9.28e-02 0.15 0.0888 0.296 CD8_TCM L2
ENSG00000060688 SNRNP40 -571722 sc-eQTL 1.85e-01 -0.134 0.101 0.301 CD8_TEM L2
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 8.39e-01 0.0197 0.0968 0.301 CD8_TEM L2
ENSG00000134644 PUM1 -340925 sc-eQTL 8.52e-01 -0.0185 0.099 0.301 CD8_TEM L2
ENSG00000162511 LAPTM5 -32708 sc-eQTL 7.06e-01 -0.0351 0.093 0.301 CD8_TEM L2
ENSG00000162517 PEF1 -919830 sc-eQTL 1.19e-01 -0.136 0.0871 0.301 CD8_TEM L2
ENSG00000186056 MATN1-AS1 6562 sc-eQTL 4.31e-02 -0.195 0.0956 0.301 CD8_TEM L2
ENSG00000287510 AL137857.1 -6627 sc-eQTL 1.37e-01 -0.13 0.0869 0.301 CD8_TEM L2
ENSG00000060688 SNRNP40 -571722 sc-eQTL 7.19e-01 -0.0366 0.102 0.301 MAIT L2
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 2.40e-01 0.106 0.0897 0.301 MAIT L2
ENSG00000134644 PUM1 -340925 sc-eQTL 5.17e-01 -0.056 0.0862 0.301 MAIT L2
ENSG00000162511 LAPTM5 -32708 sc-eQTL 6.39e-01 0.0382 0.0814 0.301 MAIT L2
ENSG00000162517 PEF1 -919830 sc-eQTL 4.03e-01 0.0748 0.0893 0.301 MAIT L2
ENSG00000186056 MATN1-AS1 6562 sc-eQTL 4.94e-01 0.0621 0.0906 0.301 MAIT L2
ENSG00000287510 AL137857.1 -6627 sc-eQTL 1.67e-01 -0.129 0.093 0.301 MAIT L2
ENSG00000060688 SNRNP40 -571722 sc-eQTL 3.21e-01 0.102 0.102 0.302 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 1.45e-01 -0.126 0.0863 0.302 NK_CD56bright L2
ENSG00000134644 PUM1 -340925 sc-eQTL 9.77e-01 -0.0026 0.0911 0.302 NK_CD56bright L2
ENSG00000162511 LAPTM5 -32708 sc-eQTL 8.84e-01 -0.0131 0.0898 0.302 NK_CD56bright L2
ENSG00000162517 PEF1 -919830 sc-eQTL 8.61e-01 0.0153 0.0872 0.302 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 6562 sc-eQTL 3.28e-02 -0.192 0.0892 0.302 NK_CD56bright L2
ENSG00000287510 AL137857.1 -6627 sc-eQTL 5.03e-01 -0.0596 0.0888 0.302 NK_CD56bright L2
ENSG00000060688 SNRNP40 -571722 sc-eQTL 7.25e-01 -0.0342 0.0971 0.306 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 1.75e-01 -0.0972 0.0715 0.306 NK_CD56dim L2
ENSG00000134644 PUM1 -340925 sc-eQTL 9.95e-01 -0.000432 0.0737 0.306 NK_CD56dim L2
ENSG00000162511 LAPTM5 -32708 sc-eQTL 2.52e-01 -0.0899 0.0784 0.306 NK_CD56dim L2
ENSG00000162517 PEF1 -919830 sc-eQTL 2.08e-01 -0.0881 0.0697 0.306 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 6562 sc-eQTL 2.73e-01 0.108 0.0982 0.306 NK_CD56dim L2
ENSG00000287510 AL137857.1 -6627 sc-eQTL 6.12e-01 0.0412 0.0812 0.306 NK_CD56dim L2
ENSG00000060688 SNRNP40 -571722 sc-eQTL 9.01e-01 -0.0129 0.103 0.308 NK_HLA L2
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 2.40e-01 0.108 0.0915 0.308 NK_HLA L2
ENSG00000134644 PUM1 -340925 sc-eQTL 3.09e-02 0.192 0.0884 0.308 NK_HLA L2
ENSG00000162511 LAPTM5 -32708 sc-eQTL 5.35e-01 0.0531 0.0853 0.308 NK_HLA L2
ENSG00000162517 PEF1 -919830 sc-eQTL 9.36e-01 -0.00769 0.0962 0.308 NK_HLA L2
ENSG00000186056 MATN1-AS1 6562 sc-eQTL 2.53e-01 0.104 0.0905 0.308 NK_HLA L2
ENSG00000287510 AL137857.1 -6627 sc-eQTL 1.18e-01 -0.137 0.0873 0.308 NK_HLA L2
ENSG00000060688 SNRNP40 -571722 sc-eQTL 3.52e-01 -0.0889 0.0953 0.306 NK_cytokine L2
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 9.86e-01 0.00131 0.0745 0.306 NK_cytokine L2
ENSG00000134644 PUM1 -340925 sc-eQTL 6.61e-01 0.0353 0.0805 0.306 NK_cytokine L2
ENSG00000162511 LAPTM5 -32708 sc-eQTL 4.80e-01 -0.0627 0.0886 0.306 NK_cytokine L2
ENSG00000162517 PEF1 -919830 sc-eQTL 5.56e-01 0.0445 0.0755 0.306 NK_cytokine L2
ENSG00000186056 MATN1-AS1 6562 sc-eQTL 8.29e-01 0.0204 0.094 0.306 NK_cytokine L2
ENSG00000287510 AL137857.1 -6627 sc-eQTL 4.00e-01 -0.0737 0.0873 0.306 NK_cytokine L2
ENSG00000060688 SNRNP40 -571722 sc-eQTL 2.18e-01 -0.14 0.113 0.311 PB L2
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 9.30e-01 -0.0116 0.132 0.311 PB L2
ENSG00000134644 PUM1 -340925 sc-eQTL 4.28e-01 -0.0907 0.114 0.311 PB L2
ENSG00000162510 MATN1 1481 sc-eQTL 6.15e-01 0.0537 0.106 0.311 PB L2
ENSG00000162511 LAPTM5 -32708 sc-eQTL 7.12e-01 0.0282 0.0761 0.311 PB L2
ENSG00000162517 PEF1 -919830 sc-eQTL 7.12e-01 -0.0434 0.117 0.311 PB L2
ENSG00000186056 MATN1-AS1 6562 sc-eQTL 2.13e-01 0.13 0.104 0.311 PB L2
ENSG00000287510 AL137857.1 -6627 sc-eQTL 3.32e-01 -0.108 0.11 0.311 PB L2
ENSG00000060688 SNRNP40 -571722 sc-eQTL 1.35e-01 -0.112 0.0746 0.3 Pro_T L2
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 3.16e-01 -0.0954 0.0949 0.3 Pro_T L2
ENSG00000134644 PUM1 -340925 sc-eQTL 4.36e-02 -0.178 0.0879 0.3 Pro_T L2
ENSG00000162511 LAPTM5 -32708 sc-eQTL 7.58e-02 0.113 0.0632 0.3 Pro_T L2
ENSG00000162517 PEF1 -919830 sc-eQTL 3.33e-01 0.0905 0.0932 0.3 Pro_T L2
ENSG00000186056 MATN1-AS1 6562 sc-eQTL 7.80e-01 0.0249 0.089 0.3 Pro_T L2
ENSG00000287510 AL137857.1 -6627 sc-eQTL 3.20e-01 -0.0814 0.0816 0.3 Pro_T L2
ENSG00000060688 SNRNP40 -571722 sc-eQTL 8.46e-01 -0.019 0.0978 0.303 Treg L2
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 9.24e-01 -0.00901 0.0946 0.303 Treg L2
ENSG00000134644 PUM1 -340925 sc-eQTL 5.28e-01 0.0478 0.0757 0.303 Treg L2
ENSG00000162511 LAPTM5 -32708 sc-eQTL 9.20e-01 -0.00874 0.0867 0.303 Treg L2
ENSG00000162517 PEF1 -919830 sc-eQTL 7.27e-01 0.0327 0.0936 0.303 Treg L2
ENSG00000186056 MATN1-AS1 6562 sc-eQTL 4.17e-02 0.179 0.0875 0.303 Treg L2
ENSG00000287510 AL137857.1 -6627 sc-eQTL 1.40e-01 -0.13 0.0878 0.303 Treg L2
ENSG00000060688 SNRNP40 -571722 sc-eQTL 7.12e-02 -0.188 0.103 0.31 cDC L2
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 8.96e-01 0.0148 0.113 0.31 cDC L2
ENSG00000134644 PUM1 -340925 sc-eQTL 3.30e-02 0.206 0.0958 0.31 cDC L2
ENSG00000162511 LAPTM5 -32708 sc-eQTL 4.46e-01 -0.0519 0.0679 0.31 cDC L2
ENSG00000162517 PEF1 -919830 sc-eQTL 9.34e-01 -0.00818 0.0985 0.31 cDC L2
ENSG00000168528 SERINC2 -684499 sc-eQTL 5.63e-01 -0.0505 0.0872 0.31 cDC L2
ENSG00000284543 LINC01226 -781160 sc-eQTL 2.89e-01 0.091 0.0855 0.31 cDC L2
ENSG00000287510 AL137857.1 -6627 sc-eQTL 2.00e-02 -0.213 0.091 0.31 cDC L2
ENSG00000060688 SNRNP40 -571722 sc-eQTL 3.36e-01 -0.0776 0.0805 0.303 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 3.01e-01 -0.0932 0.0898 0.303 cMono_IL1B L2
ENSG00000134644 PUM1 -340925 sc-eQTL 4.64e-01 0.0447 0.0609 0.303 cMono_IL1B L2
ENSG00000162511 LAPTM5 -32708 sc-eQTL 5.08e-01 -0.0354 0.0534 0.303 cMono_IL1B L2
ENSG00000162512 SDC3 -183692 sc-eQTL 1.53e-01 -0.144 0.1 0.303 cMono_IL1B L2
ENSG00000162517 PEF1 -919830 sc-eQTL 4.75e-01 0.0588 0.0822 0.303 cMono_IL1B L2
ENSG00000168528 SERINC2 -684499 sc-eQTL 3.15e-01 -0.103 0.102 0.303 cMono_IL1B L2
ENSG00000284543 LINC01226 -781160 sc-eQTL 2.21e-02 0.205 0.089 0.303 cMono_IL1B L2
ENSG00000287510 AL137857.1 -6627 sc-eQTL 6.83e-01 0.0344 0.084 0.303 cMono_IL1B L2
ENSG00000060688 SNRNP40 -571722 sc-eQTL 8.52e-01 0.0159 0.0849 0.303 cMono_S100A L2
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 4.32e-01 0.0789 0.1 0.303 cMono_S100A L2
ENSG00000134644 PUM1 -340925 sc-eQTL 3.09e-01 -0.0738 0.0723 0.303 cMono_S100A L2
ENSG00000162511 LAPTM5 -32708 sc-eQTL 8.10e-01 -0.0134 0.0557 0.303 cMono_S100A L2
ENSG00000162512 SDC3 -183692 sc-eQTL 5.36e-01 -0.0596 0.0962 0.303 cMono_S100A L2
ENSG00000162517 PEF1 -919830 sc-eQTL 3.18e-01 -0.0869 0.0867 0.303 cMono_S100A L2
ENSG00000168528 SERINC2 -684499 sc-eQTL 1.97e-01 -0.131 0.102 0.303 cMono_S100A L2
ENSG00000284543 LINC01226 -781160 sc-eQTL 7.04e-02 0.149 0.0821 0.303 cMono_S100A L2
ENSG00000287510 AL137857.1 -6627 sc-eQTL 7.08e-01 0.0312 0.0831 0.303 cMono_S100A L2
ENSG00000060688 SNRNP40 -571722 sc-eQTL 5.13e-01 0.0866 0.132 0.291 gdT L2
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 3.83e-01 0.0992 0.113 0.291 gdT L2
ENSG00000134644 PUM1 -340925 sc-eQTL 4.71e-01 0.0844 0.117 0.291 gdT L2
ENSG00000162511 LAPTM5 -32708 sc-eQTL 8.07e-01 0.0311 0.127 0.291 gdT L2
ENSG00000162517 PEF1 -919830 sc-eQTL 3.74e-01 0.104 0.116 0.291 gdT L2
ENSG00000186056 MATN1-AS1 6562 sc-eQTL 5.67e-01 -0.0672 0.117 0.291 gdT L2
ENSG00000287510 AL137857.1 -6627 sc-eQTL 6.32e-01 -0.0546 0.114 0.291 gdT L2
ENSG00000060688 SNRNP40 -571722 sc-eQTL 8.05e-01 -0.0232 0.0941 0.307 intMono L2
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 2.56e-01 -0.115 0.101 0.307 intMono L2
ENSG00000134644 PUM1 -340925 sc-eQTL 3.45e-01 -0.0811 0.0856 0.307 intMono L2
ENSG00000162511 LAPTM5 -32708 sc-eQTL 2.29e-01 0.081 0.0671 0.307 intMono L2
ENSG00000162512 SDC3 -183692 sc-eQTL 6.01e-01 -0.0483 0.0921 0.307 intMono L2
ENSG00000162517 PEF1 -919830 sc-eQTL 1.43e-01 -0.142 0.0964 0.307 intMono L2
ENSG00000168528 SERINC2 -684499 sc-eQTL 4.53e-02 -0.192 0.0956 0.307 intMono L2
ENSG00000284543 LINC01226 -781160 sc-eQTL 4.02e-01 0.0767 0.0913 0.307 intMono L2
ENSG00000287510 AL137857.1 -6627 sc-eQTL 8.72e-01 0.0148 0.0915 0.307 intMono L2
ENSG00000060688 SNRNP40 -571722 sc-eQTL 2.13e-01 0.111 0.0888 0.301 ncMono L2
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 3.96e-02 -0.195 0.0941 0.301 ncMono L2
ENSG00000134644 PUM1 -340925 sc-eQTL 2.70e-01 -0.0857 0.0775 0.301 ncMono L2
ENSG00000162511 LAPTM5 -32708 sc-eQTL 1.70e-01 0.0967 0.0702 0.301 ncMono L2
ENSG00000162512 SDC3 -183692 sc-eQTL 2.69e-01 -0.0873 0.0789 0.301 ncMono L2
ENSG00000162517 PEF1 -919830 sc-eQTL 8.66e-02 -0.155 0.09 0.301 ncMono L2
ENSG00000168528 SERINC2 -684499 sc-eQTL 4.47e-01 -0.0656 0.0862 0.301 ncMono L2
ENSG00000284543 LINC01226 -781160 sc-eQTL 5.32e-01 -0.0539 0.0862 0.301 ncMono L2
ENSG00000287510 AL137857.1 -6627 sc-eQTL 8.40e-01 0.018 0.0894 0.301 ncMono L2
ENSG00000060688 SNRNP40 -571722 sc-eQTL 9.24e-01 -0.0097 0.102 0.297 pDC L2
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 5.05e-01 0.0746 0.112 0.297 pDC L2
ENSG00000134644 PUM1 -340925 sc-eQTL 6.22e-01 -0.0458 0.0926 0.297 pDC L2
ENSG00000162511 LAPTM5 -32708 sc-eQTL 3.55e-01 0.0796 0.0859 0.297 pDC L2
ENSG00000162517 PEF1 -919830 sc-eQTL 3.25e-01 -0.11 0.111 0.297 pDC L2
ENSG00000168528 SERINC2 -684499 sc-eQTL 9.50e-01 0.00655 0.104 0.297 pDC L2
ENSG00000284543 LINC01226 -781160 sc-eQTL 3.75e-01 0.0719 0.0809 0.297 pDC L2
ENSG00000287510 AL137857.1 -6627 sc-eQTL 9.46e-01 0.00649 0.0954 0.297 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -571722 sc-eQTL 7.06e-01 0.0371 0.0983 0.303 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 7.49e-01 0.0262 0.0818 0.303 B_Memory LOneK1K
ENSG00000134644 PUM1 -340925 sc-eQTL 3.47e-01 0.0683 0.0724 0.303 B_Memory LOneK1K
ENSG00000162510 MATN1 1481 sc-eQTL 7.31e-02 0.148 0.0821 0.303 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -32708 sc-eQTL 3.59e-01 0.0477 0.0519 0.303 B_Memory LOneK1K
ENSG00000162517 PEF1 -919830 sc-eQTL 6.33e-01 0.0411 0.086 0.303 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 6562 sc-eQTL 9.77e-01 0.00202 0.0687 0.303 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -6627 sc-eQTL 1.77e-01 -0.101 0.0746 0.303 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -571722 sc-eQTL 4.80e-02 -0.178 0.0897 0.303 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 1.32e-01 -0.108 0.0712 0.303 B_Naive LOneK1K
ENSG00000134644 PUM1 -340925 sc-eQTL 6.28e-01 -0.0329 0.0677 0.303 B_Naive LOneK1K
ENSG00000162510 MATN1 1481 sc-eQTL 8.07e-01 -0.0159 0.0652 0.303 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -32708 sc-eQTL 3.02e-01 0.0474 0.0458 0.303 B_Naive LOneK1K
ENSG00000162517 PEF1 -919830 sc-eQTL 6.34e-01 -0.0399 0.0838 0.303 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 6562 sc-eQTL 2.38e-01 -0.0699 0.0591 0.303 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -6627 sc-eQTL 6.32e-01 -0.0337 0.0704 0.303 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -571722 sc-eQTL 1.95e-01 -0.099 0.0762 0.303 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 6.12e-01 -0.044 0.0866 0.303 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -340925 sc-eQTL 8.43e-01 -0.0109 0.0553 0.303 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -32708 sc-eQTL 4.88e-01 -0.0337 0.0485 0.303 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -183692 sc-eQTL 1.70e-01 -0.136 0.0987 0.303 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -919830 sc-eQTL 9.44e-01 0.00493 0.0697 0.303 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -684499 sc-eQTL 1.77e-01 -0.137 0.101 0.303 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -781160 sc-eQTL 9.73e-03 0.215 0.0823 0.303 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -6627 sc-eQTL 4.53e-01 0.0588 0.0781 0.303 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -571722 sc-eQTL 1.85e-01 0.11 0.0831 0.306 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 6.95e-02 -0.165 0.0905 0.306 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -340925 sc-eQTL 6.54e-01 -0.0335 0.0747 0.306 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -32708 sc-eQTL 1.18e-01 0.0935 0.0595 0.306 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -183692 sc-eQTL 6.44e-01 -0.0404 0.0873 0.306 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -919830 sc-eQTL 3.45e-02 -0.167 0.0785 0.306 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -684499 sc-eQTL 1.80e-01 -0.121 0.0902 0.306 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -781160 sc-eQTL 7.44e-01 0.0281 0.086 0.306 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -6627 sc-eQTL 4.56e-01 0.0643 0.086 0.306 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -571722 sc-eQTL 6.67e-01 -0.0399 0.0926 0.306 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -571916 sc-eQTL 5.08e-01 -0.0419 0.0632 0.306 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -340925 sc-eQTL 6.50e-01 0.0315 0.0693 0.306 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -32708 sc-eQTL 3.50e-01 -0.0724 0.0773 0.306 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -919830 sc-eQTL 6.24e-01 -0.0289 0.0588 0.306 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 6562 sc-eQTL 3.17e-01 0.0894 0.0891 0.306 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -6627 sc-eQTL 3.79e-01 -0.0678 0.077 0.306 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162510 MATN1 1481 eQTL 0.000238 0.0756 0.0205 0.0136 0.0119 0.32
ENSG00000162511 LAPTM5 -32708 eQTL 0.0346 -0.0222 0.0105 0.0 0.0 0.32
ENSG00000186056 MATN1-AS1 6562 eQTL 5.07e-05 -0.0534 0.0131 0.0 0.0 0.32

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162510 MATN1 1481 9.15e-05 7.49e-05 1.3e-05 2.54e-05 1.13e-05 3.15e-05 9.74e-05 1.02e-05 7.34e-05 3.63e-05 9.97e-05 3.82e-05 0.000118 3.7e-05 1.45e-05 4.96e-05 4.05e-05 5.46e-05 1.64e-05 1.6e-05 3.35e-05 7.69e-05 7.22e-05 1.99e-05 9.94e-05 2.09e-05 3.53e-05 2.99e-05 7.42e-05 5.46e-05 4.93e-05 3.87e-06 6.21e-06 1.35e-05 2.13e-05 1.08e-05 6.25e-06 6.05e-06 9.95e-06 5.27e-06 2.53e-06 8.5e-05 8.9e-06 6.17e-07 6.99e-06 9.91e-06 9.39e-06 3.75e-06 3.22e-06