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Genes within 1Mb (chr1:30724952:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -571836 sc-eQTL 7.64e-01 -0.0252 0.0837 0.385 B L1
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 5.01e-01 -0.0451 0.067 0.385 B L1
ENSG00000134644 PUM1 -341039 sc-eQTL 1.89e-01 0.0738 0.056 0.385 B L1
ENSG00000162510 MATN1 1367 sc-eQTL 1.41e-01 -0.087 0.0588 0.385 B L1
ENSG00000162511 LAPTM5 -32822 sc-eQTL 3.54e-01 0.0429 0.0462 0.385 B L1
ENSG00000162517 PEF1 -919944 sc-eQTL 4.50e-01 0.0528 0.0698 0.385 B L1
ENSG00000186056 MATN1-AS1 6448 sc-eQTL 6.34e-01 0.0259 0.0542 0.385 B L1
ENSG00000287510 AL137857.1 -6741 sc-eQTL 2.16e-02 0.147 0.0634 0.385 B L1
ENSG00000060688 SNRNP40 -571836 sc-eQTL 1.77e-01 -0.0982 0.0724 0.385 CD4T L1
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 9.94e-02 0.0934 0.0565 0.385 CD4T L1
ENSG00000134644 PUM1 -341039 sc-eQTL 5.50e-01 0.0303 0.0505 0.385 CD4T L1
ENSG00000162511 LAPTM5 -32822 sc-eQTL 4.82e-01 0.0395 0.056 0.385 CD4T L1
ENSG00000162517 PEF1 -919944 sc-eQTL 3.96e-01 0.0497 0.0585 0.385 CD4T L1
ENSG00000186056 MATN1-AS1 6448 sc-eQTL 4.30e-01 -0.0396 0.0501 0.385 CD4T L1
ENSG00000287510 AL137857.1 -6741 sc-eQTL 6.75e-01 0.0252 0.06 0.385 CD4T L1
ENSG00000060688 SNRNP40 -571836 sc-eQTL 4.33e-01 0.0748 0.0953 0.385 CD8T L1
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 1.32e-01 -0.0954 0.0632 0.385 CD8T L1
ENSG00000134644 PUM1 -341039 sc-eQTL 1.34e-01 0.0837 0.0556 0.385 CD8T L1
ENSG00000162511 LAPTM5 -32822 sc-eQTL 3.99e-01 0.0458 0.0542 0.385 CD8T L1
ENSG00000162517 PEF1 -919944 sc-eQTL 3.18e-01 0.0667 0.0667 0.385 CD8T L1
ENSG00000186056 MATN1-AS1 6448 sc-eQTL 4.39e-01 -0.0493 0.0635 0.385 CD8T L1
ENSG00000287510 AL137857.1 -6741 sc-eQTL 1.64e-01 0.111 0.0796 0.385 CD8T L1
ENSG00000060688 SNRNP40 -571836 sc-eQTL 9.18e-01 -0.00894 0.0864 0.378 DC L1
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 4.71e-01 0.0737 0.102 0.378 DC L1
ENSG00000134644 PUM1 -341039 sc-eQTL 3.49e-02 -0.168 0.0792 0.378 DC L1
ENSG00000162511 LAPTM5 -32822 sc-eQTL 8.73e-01 -0.00914 0.0572 0.378 DC L1
ENSG00000162517 PEF1 -919944 sc-eQTL 6.28e-01 -0.045 0.0927 0.378 DC L1
ENSG00000168528 SERINC2 -684613 sc-eQTL 8.04e-01 0.0234 0.0943 0.378 DC L1
ENSG00000284543 LINC01226 -781274 sc-eQTL 3.98e-01 -0.0528 0.0624 0.378 DC L1
ENSG00000287510 AL137857.1 -6741 sc-eQTL 8.43e-01 0.0179 0.0905 0.378 DC L1
ENSG00000060688 SNRNP40 -571836 sc-eQTL 2.37e-01 0.0791 0.0667 0.385 Mono L1
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 5.98e-01 0.0437 0.0829 0.385 Mono L1
ENSG00000134644 PUM1 -341039 sc-eQTL 6.53e-01 0.0239 0.0532 0.385 Mono L1
ENSG00000162511 LAPTM5 -32822 sc-eQTL 4.92e-01 0.0336 0.0489 0.385 Mono L1
ENSG00000162512 SDC3 -183806 sc-eQTL 2.53e-01 -0.107 0.0937 0.385 Mono L1
ENSG00000162517 PEF1 -919944 sc-eQTL 6.01e-01 0.0345 0.0659 0.385 Mono L1
ENSG00000168528 SERINC2 -684613 sc-eQTL 3.98e-01 0.0854 0.101 0.385 Mono L1
ENSG00000284543 LINC01226 -781274 sc-eQTL 1.95e-02 -0.206 0.0877 0.385 Mono L1
ENSG00000287510 AL137857.1 -6741 sc-eQTL 7.98e-01 0.0199 0.0777 0.385 Mono L1
ENSG00000060688 SNRNP40 -571836 sc-eQTL 2.09e-01 0.113 0.0898 0.384 NK L1
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 7.31e-01 -0.0212 0.0617 0.384 NK L1
ENSG00000134644 PUM1 -341039 sc-eQTL 5.13e-01 0.0424 0.0647 0.384 NK L1
ENSG00000162511 LAPTM5 -32822 sc-eQTL 3.73e-02 0.155 0.0737 0.384 NK L1
ENSG00000162517 PEF1 -919944 sc-eQTL 7.64e-01 0.0164 0.0544 0.384 NK L1
ENSG00000186056 MATN1-AS1 6448 sc-eQTL 2.25e-01 -0.101 0.0834 0.384 NK L1
ENSG00000287510 AL137857.1 -6741 sc-eQTL 7.68e-02 0.136 0.0767 0.384 NK L1
ENSG00000060688 SNRNP40 -571836 sc-eQTL 3.78e-01 0.061 0.0689 0.385 Other_T L1
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 9.56e-01 -0.00407 0.0738 0.385 Other_T L1
ENSG00000134644 PUM1 -341039 sc-eQTL 4.39e-01 -0.0513 0.0663 0.385 Other_T L1
ENSG00000162511 LAPTM5 -32822 sc-eQTL 9.83e-01 0.00116 0.0544 0.385 Other_T L1
ENSG00000162517 PEF1 -919944 sc-eQTL 3.04e-01 -0.0747 0.0725 0.385 Other_T L1
ENSG00000186056 MATN1-AS1 6448 sc-eQTL 8.97e-01 -0.0116 0.0891 0.385 Other_T L1
ENSG00000287510 AL137857.1 -6741 sc-eQTL 1.10e-01 0.148 0.0923 0.385 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -571836 sc-eQTL 1.88e-01 -0.145 0.11 0.378 B_Activated L2
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 3.64e-01 -0.101 0.111 0.378 B_Activated L2
ENSG00000134644 PUM1 -341039 sc-eQTL 5.04e-01 0.0691 0.103 0.378 B_Activated L2
ENSG00000162510 MATN1 1367 sc-eQTL 1.87e-01 0.119 0.0898 0.378 B_Activated L2
ENSG00000162511 LAPTM5 -32822 sc-eQTL 5.15e-01 0.041 0.0629 0.378 B_Activated L2
ENSG00000162517 PEF1 -919944 sc-eQTL 5.02e-02 0.209 0.106 0.378 B_Activated L2
ENSG00000186056 MATN1-AS1 6448 sc-eQTL 3.70e-01 0.0911 0.101 0.378 B_Activated L2
ENSG00000287510 AL137857.1 -6741 sc-eQTL 2.55e-01 0.102 0.0896 0.378 B_Activated L2
ENSG00000060688 SNRNP40 -571836 sc-eQTL 6.94e-01 -0.0405 0.103 0.382 B_Intermediate L2
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 6.24e-01 0.0421 0.0857 0.382 B_Intermediate L2
ENSG00000134644 PUM1 -341039 sc-eQTL 2.83e-01 0.0869 0.0807 0.382 B_Intermediate L2
ENSG00000162510 MATN1 1367 sc-eQTL 5.86e-01 -0.0458 0.0841 0.382 B_Intermediate L2
ENSG00000162511 LAPTM5 -32822 sc-eQTL 5.92e-02 0.0972 0.0512 0.382 B_Intermediate L2
ENSG00000162517 PEF1 -919944 sc-eQTL 7.56e-01 0.0298 0.0959 0.382 B_Intermediate L2
ENSG00000186056 MATN1-AS1 6448 sc-eQTL 6.97e-01 0.0283 0.0725 0.382 B_Intermediate L2
ENSG00000287510 AL137857.1 -6741 sc-eQTL 5.39e-01 0.0499 0.0811 0.382 B_Intermediate L2
ENSG00000060688 SNRNP40 -571836 sc-eQTL 7.37e-01 0.0342 0.102 0.386 B_Memory L2
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 7.31e-01 0.0322 0.0937 0.386 B_Memory L2
ENSG00000134644 PUM1 -341039 sc-eQTL 3.98e-01 -0.0689 0.0814 0.386 B_Memory L2
ENSG00000162510 MATN1 1367 sc-eQTL 4.86e-02 -0.153 0.0773 0.386 B_Memory L2
ENSG00000162511 LAPTM5 -32822 sc-eQTL 5.20e-01 0.0445 0.0691 0.386 B_Memory L2
ENSG00000162517 PEF1 -919944 sc-eQTL 8.05e-01 0.0229 0.0923 0.386 B_Memory L2
ENSG00000186056 MATN1-AS1 6448 sc-eQTL 9.97e-01 -0.000325 0.0791 0.386 B_Memory L2
ENSG00000287510 AL137857.1 -6741 sc-eQTL 5.90e-01 0.0499 0.0926 0.386 B_Memory L2
ENSG00000060688 SNRNP40 -571836 sc-eQTL 8.75e-01 0.0145 0.0919 0.385 B_Naive1 L2
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 1.84e-01 -0.105 0.079 0.385 B_Naive1 L2
ENSG00000134644 PUM1 -341039 sc-eQTL 3.30e-02 0.149 0.0692 0.385 B_Naive1 L2
ENSG00000162510 MATN1 1367 sc-eQTL 5.10e-02 -0.138 0.0704 0.385 B_Naive1 L2
ENSG00000162511 LAPTM5 -32822 sc-eQTL 3.33e-01 0.0459 0.0473 0.385 B_Naive1 L2
ENSG00000162517 PEF1 -919944 sc-eQTL 1.13e-01 0.132 0.0831 0.385 B_Naive1 L2
ENSG00000186056 MATN1-AS1 6448 sc-eQTL 9.34e-01 -0.00513 0.0623 0.385 B_Naive1 L2
ENSG00000287510 AL137857.1 -6741 sc-eQTL 7.13e-04 0.257 0.0749 0.385 B_Naive1 L2
ENSG00000060688 SNRNP40 -571836 sc-eQTL 3.32e-01 -0.0942 0.097 0.386 B_Naive2 L2
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 5.38e-01 -0.0495 0.0802 0.386 B_Naive2 L2
ENSG00000134644 PUM1 -341039 sc-eQTL 2.18e-01 -0.0966 0.0783 0.386 B_Naive2 L2
ENSG00000162510 MATN1 1367 sc-eQTL 2.50e-01 -0.0868 0.0752 0.386 B_Naive2 L2
ENSG00000162511 LAPTM5 -32822 sc-eQTL 1.05e-01 0.0828 0.0509 0.386 B_Naive2 L2
ENSG00000162517 PEF1 -919944 sc-eQTL 8.69e-01 0.0153 0.0931 0.386 B_Naive2 L2
ENSG00000186056 MATN1-AS1 6448 sc-eQTL 4.16e-01 -0.0606 0.0744 0.386 B_Naive2 L2
ENSG00000287510 AL137857.1 -6741 sc-eQTL 9.04e-01 0.00974 0.0805 0.386 B_Naive2 L2
ENSG00000060688 SNRNP40 -571836 sc-eQTL 9.85e-01 0.00186 0.0963 0.384 CD4_CTL L2
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 2.97e-01 -0.0987 0.0944 0.384 CD4_CTL L2
ENSG00000134644 PUM1 -341039 sc-eQTL 6.84e-01 0.0378 0.0928 0.384 CD4_CTL L2
ENSG00000162511 LAPTM5 -32822 sc-eQTL 5.17e-01 0.0536 0.0827 0.384 CD4_CTL L2
ENSG00000162517 PEF1 -919944 sc-eQTL 7.81e-01 -0.0236 0.0848 0.384 CD4_CTL L2
ENSG00000186056 MATN1-AS1 6448 sc-eQTL 8.40e-01 0.0183 0.0905 0.384 CD4_CTL L2
ENSG00000287510 AL137857.1 -6741 sc-eQTL 2.24e-01 -0.097 0.0796 0.384 CD4_CTL L2
ENSG00000060688 SNRNP40 -571836 sc-eQTL 5.99e-01 -0.0403 0.0765 0.385 CD4_Naive L2
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 3.68e-01 0.0611 0.0677 0.385 CD4_Naive L2
ENSG00000134644 PUM1 -341039 sc-eQTL 3.85e-01 0.0471 0.0541 0.385 CD4_Naive L2
ENSG00000162511 LAPTM5 -32822 sc-eQTL 3.41e-01 0.0553 0.058 0.385 CD4_Naive L2
ENSG00000162517 PEF1 -919944 sc-eQTL 4.12e-01 0.0522 0.0636 0.385 CD4_Naive L2
ENSG00000186056 MATN1-AS1 6448 sc-eQTL 7.10e-01 -0.0219 0.0589 0.385 CD4_Naive L2
ENSG00000287510 AL137857.1 -6741 sc-eQTL 6.97e-01 0.0264 0.0677 0.385 CD4_Naive L2
ENSG00000060688 SNRNP40 -571836 sc-eQTL 5.07e-01 -0.0632 0.0951 0.385 CD4_TCM L2
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 9.99e-01 -5.15e-05 0.0767 0.385 CD4_TCM L2
ENSG00000134644 PUM1 -341039 sc-eQTL 4.64e-01 0.0497 0.0678 0.385 CD4_TCM L2
ENSG00000162511 LAPTM5 -32822 sc-eQTL 2.05e-01 0.0714 0.0561 0.385 CD4_TCM L2
ENSG00000162517 PEF1 -919944 sc-eQTL 5.34e-01 0.047 0.0754 0.385 CD4_TCM L2
ENSG00000186056 MATN1-AS1 6448 sc-eQTL 2.70e-01 -0.0789 0.0713 0.385 CD4_TCM L2
ENSG00000287510 AL137857.1 -6741 sc-eQTL 2.83e-01 -0.0855 0.0794 0.385 CD4_TCM L2
ENSG00000060688 SNRNP40 -571836 sc-eQTL 3.31e-01 -0.091 0.0934 0.385 CD4_TEM L2
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 3.92e-01 0.0764 0.0891 0.385 CD4_TEM L2
ENSG00000134644 PUM1 -341039 sc-eQTL 3.37e-01 0.0713 0.0742 0.385 CD4_TEM L2
ENSG00000162511 LAPTM5 -32822 sc-eQTL 1.89e-02 0.176 0.0742 0.385 CD4_TEM L2
ENSG00000162517 PEF1 -919944 sc-eQTL 6.23e-01 0.0415 0.0842 0.385 CD4_TEM L2
ENSG00000186056 MATN1-AS1 6448 sc-eQTL 7.25e-01 -0.031 0.0879 0.385 CD4_TEM L2
ENSG00000287510 AL137857.1 -6741 sc-eQTL 3.84e-01 -0.0756 0.0865 0.385 CD4_TEM L2
ENSG00000060688 SNRNP40 -571836 sc-eQTL 8.58e-01 -0.0184 0.102 0.385 CD8_CTL L2
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 9.24e-01 0.00751 0.0785 0.385 CD8_CTL L2
ENSG00000134644 PUM1 -341039 sc-eQTL 7.34e-01 -0.0259 0.0762 0.385 CD8_CTL L2
ENSG00000162511 LAPTM5 -32822 sc-eQTL 5.02e-01 0.0566 0.0843 0.385 CD8_CTL L2
ENSG00000162517 PEF1 -919944 sc-eQTL 1.30e-01 0.111 0.0731 0.385 CD8_CTL L2
ENSG00000186056 MATN1-AS1 6448 sc-eQTL 1.96e-01 -0.115 0.0884 0.385 CD8_CTL L2
ENSG00000287510 AL137857.1 -6741 sc-eQTL 7.01e-01 0.0321 0.0834 0.385 CD8_CTL L2
ENSG00000060688 SNRNP40 -571836 sc-eQTL 5.87e-01 -0.0516 0.0946 0.385 CD8_Naive L2
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 8.75e-02 -0.139 0.0811 0.385 CD8_Naive L2
ENSG00000134644 PUM1 -341039 sc-eQTL 2.33e-01 0.0783 0.0655 0.385 CD8_Naive L2
ENSG00000162511 LAPTM5 -32822 sc-eQTL 7.13e-02 0.113 0.0625 0.385 CD8_Naive L2
ENSG00000162517 PEF1 -919944 sc-eQTL 4.08e-01 -0.0724 0.0874 0.385 CD8_Naive L2
ENSG00000186056 MATN1-AS1 6448 sc-eQTL 8.85e-01 -0.0114 0.0786 0.385 CD8_Naive L2
ENSG00000287510 AL137857.1 -6741 sc-eQTL 9.93e-01 -0.000721 0.0856 0.385 CD8_Naive L2
ENSG00000060688 SNRNP40 -571836 sc-eQTL 9.57e-01 -0.00585 0.109 0.387 CD8_TCM L2
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 8.04e-01 -0.0249 0.1 0.387 CD8_TCM L2
ENSG00000134644 PUM1 -341039 sc-eQTL 9.93e-01 -0.000839 0.094 0.387 CD8_TCM L2
ENSG00000162511 LAPTM5 -32822 sc-eQTL 6.10e-01 0.0502 0.0983 0.387 CD8_TCM L2
ENSG00000162517 PEF1 -919944 sc-eQTL 7.72e-01 0.0292 0.101 0.387 CD8_TCM L2
ENSG00000186056 MATN1-AS1 6448 sc-eQTL 1.72e-01 -0.124 0.0907 0.387 CD8_TCM L2
ENSG00000287510 AL137857.1 -6741 sc-eQTL 2.25e-01 -0.112 0.0917 0.387 CD8_TCM L2
ENSG00000060688 SNRNP40 -571836 sc-eQTL 9.45e-02 0.164 0.0979 0.384 CD8_TEM L2
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 5.91e-01 0.0509 0.0944 0.384 CD8_TEM L2
ENSG00000134644 PUM1 -341039 sc-eQTL 9.98e-01 0.000244 0.0966 0.384 CD8_TEM L2
ENSG00000162511 LAPTM5 -32822 sc-eQTL 1.44e-01 0.133 0.0903 0.384 CD8_TEM L2
ENSG00000162517 PEF1 -919944 sc-eQTL 3.26e-01 0.084 0.0853 0.384 CD8_TEM L2
ENSG00000186056 MATN1-AS1 6448 sc-eQTL 4.70e-01 0.0682 0.0941 0.384 CD8_TEM L2
ENSG00000287510 AL137857.1 -6741 sc-eQTL 4.22e-01 -0.0686 0.0852 0.384 CD8_TEM L2
ENSG00000060688 SNRNP40 -571836 sc-eQTL 4.39e-01 0.0783 0.101 0.385 MAIT L2
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 7.98e-01 -0.023 0.0896 0.385 MAIT L2
ENSG00000134644 PUM1 -341039 sc-eQTL 8.32e-01 0.0182 0.0859 0.385 MAIT L2
ENSG00000162511 LAPTM5 -32822 sc-eQTL 4.58e-01 0.0601 0.0809 0.385 MAIT L2
ENSG00000162517 PEF1 -919944 sc-eQTL 4.91e-01 -0.0614 0.0889 0.385 MAIT L2
ENSG00000186056 MATN1-AS1 6448 sc-eQTL 6.16e-01 -0.0453 0.0902 0.385 MAIT L2
ENSG00000287510 AL137857.1 -6741 sc-eQTL 7.02e-01 0.0356 0.093 0.385 MAIT L2
ENSG00000060688 SNRNP40 -571836 sc-eQTL 7.85e-01 -0.0282 0.103 0.389 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 9.95e-01 -0.000533 0.0872 0.389 NK_CD56bright L2
ENSG00000134644 PUM1 -341039 sc-eQTL 5.27e-01 0.0579 0.0915 0.389 NK_CD56bright L2
ENSG00000162511 LAPTM5 -32822 sc-eQTL 7.98e-02 0.158 0.0896 0.389 NK_CD56bright L2
ENSG00000162517 PEF1 -919944 sc-eQTL 5.96e-01 -0.0466 0.0877 0.389 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 6448 sc-eQTL 6.49e-03 0.245 0.0891 0.389 NK_CD56bright L2
ENSG00000287510 AL137857.1 -6741 sc-eQTL 3.86e-01 0.0776 0.0892 0.389 NK_CD56bright L2
ENSG00000060688 SNRNP40 -571836 sc-eQTL 4.66e-01 0.0697 0.0954 0.384 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 6.47e-01 0.0324 0.0706 0.384 NK_CD56dim L2
ENSG00000134644 PUM1 -341039 sc-eQTL 6.60e-01 0.0319 0.0724 0.384 NK_CD56dim L2
ENSG00000162511 LAPTM5 -32822 sc-eQTL 9.16e-02 0.13 0.0768 0.384 NK_CD56dim L2
ENSG00000162517 PEF1 -919944 sc-eQTL 2.29e-01 0.0828 0.0685 0.384 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 6448 sc-eQTL 1.20e-01 -0.15 0.0963 0.384 NK_CD56dim L2
ENSG00000287510 AL137857.1 -6741 sc-eQTL 5.09e-01 0.0527 0.0798 0.384 NK_CD56dim L2
ENSG00000060688 SNRNP40 -571836 sc-eQTL 4.32e-01 0.0802 0.102 0.388 NK_HLA L2
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 8.09e-01 0.022 0.0911 0.388 NK_HLA L2
ENSG00000134644 PUM1 -341039 sc-eQTL 3.48e-02 -0.187 0.0877 0.388 NK_HLA L2
ENSG00000162511 LAPTM5 -32822 sc-eQTL 1.05e-01 0.137 0.0841 0.388 NK_HLA L2
ENSG00000162517 PEF1 -919944 sc-eQTL 1.46e-01 -0.139 0.0949 0.388 NK_HLA L2
ENSG00000186056 MATN1-AS1 6448 sc-eQTL 4.61e-01 -0.0665 0.09 0.388 NK_HLA L2
ENSG00000287510 AL137857.1 -6741 sc-eQTL 4.29e-02 0.176 0.0862 0.388 NK_HLA L2
ENSG00000060688 SNRNP40 -571836 sc-eQTL 2.58e-01 0.105 0.0927 0.384 NK_cytokine L2
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 7.46e-01 0.0236 0.0726 0.384 NK_cytokine L2
ENSG00000134644 PUM1 -341039 sc-eQTL 4.08e-01 0.065 0.0784 0.384 NK_cytokine L2
ENSG00000162511 LAPTM5 -32822 sc-eQTL 9.67e-02 0.143 0.0858 0.384 NK_cytokine L2
ENSG00000162517 PEF1 -919944 sc-eQTL 6.67e-01 -0.0317 0.0736 0.384 NK_cytokine L2
ENSG00000186056 MATN1-AS1 6448 sc-eQTL 8.07e-01 -0.0224 0.0916 0.384 NK_cytokine L2
ENSG00000287510 AL137857.1 -6741 sc-eQTL 3.30e-01 0.0831 0.085 0.384 NK_cytokine L2
ENSG00000060688 SNRNP40 -571836 sc-eQTL 3.13e-01 0.107 0.105 0.374 PB L2
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 9.20e-01 0.0124 0.123 0.374 PB L2
ENSG00000134644 PUM1 -341039 sc-eQTL 3.21e-01 0.106 0.106 0.374 PB L2
ENSG00000162510 MATN1 1367 sc-eQTL 7.92e-01 -0.0262 0.0992 0.374 PB L2
ENSG00000162511 LAPTM5 -32822 sc-eQTL 4.35e-01 -0.0554 0.0707 0.374 PB L2
ENSG00000162517 PEF1 -919944 sc-eQTL 7.62e-01 0.0332 0.109 0.374 PB L2
ENSG00000186056 MATN1-AS1 6448 sc-eQTL 7.48e-01 -0.0312 0.097 0.374 PB L2
ENSG00000287510 AL137857.1 -6741 sc-eQTL 5.17e-01 0.067 0.103 0.374 PB L2
ENSG00000060688 SNRNP40 -571836 sc-eQTL 7.96e-01 -0.0195 0.0754 0.383 Pro_T L2
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 8.69e-01 -0.0158 0.0957 0.383 Pro_T L2
ENSG00000134644 PUM1 -341039 sc-eQTL 3.84e-02 0.184 0.0883 0.383 Pro_T L2
ENSG00000162511 LAPTM5 -32822 sc-eQTL 8.21e-01 0.0145 0.064 0.383 Pro_T L2
ENSG00000162517 PEF1 -919944 sc-eQTL 4.28e-01 -0.0745 0.0938 0.383 Pro_T L2
ENSG00000186056 MATN1-AS1 6448 sc-eQTL 5.73e-01 -0.0504 0.0894 0.383 Pro_T L2
ENSG00000287510 AL137857.1 -6741 sc-eQTL 5.11e-01 0.0542 0.0822 0.383 Pro_T L2
ENSG00000060688 SNRNP40 -571836 sc-eQTL 2.33e-01 0.115 0.096 0.385 Treg L2
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 1.57e-02 0.224 0.0919 0.385 Treg L2
ENSG00000134644 PUM1 -341039 sc-eQTL 3.78e-01 -0.0658 0.0745 0.385 Treg L2
ENSG00000162511 LAPTM5 -32822 sc-eQTL 4.13e-01 0.07 0.0853 0.385 Treg L2
ENSG00000162517 PEF1 -919944 sc-eQTL 1.01e-02 -0.236 0.0908 0.385 Treg L2
ENSG00000186056 MATN1-AS1 6448 sc-eQTL 5.28e-01 -0.055 0.0869 0.385 Treg L2
ENSG00000287510 AL137857.1 -6741 sc-eQTL 4.60e-01 0.0642 0.0868 0.385 Treg L2
ENSG00000060688 SNRNP40 -571836 sc-eQTL 2.80e-01 0.109 0.101 0.38 cDC L2
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 1.90e-01 -0.144 0.109 0.38 cDC L2
ENSG00000134644 PUM1 -341039 sc-eQTL 4.06e-02 -0.192 0.0932 0.38 cDC L2
ENSG00000162511 LAPTM5 -32822 sc-eQTL 8.92e-02 0.112 0.0655 0.38 cDC L2
ENSG00000162517 PEF1 -919944 sc-eQTL 9.05e-01 0.0114 0.0957 0.38 cDC L2
ENSG00000168528 SERINC2 -684613 sc-eQTL 8.18e-01 0.0196 0.0848 0.38 cDC L2
ENSG00000284543 LINC01226 -781274 sc-eQTL 2.25e-01 0.101 0.083 0.38 cDC L2
ENSG00000287510 AL137857.1 -6741 sc-eQTL 1.78e-01 0.121 0.0893 0.38 cDC L2
ENSG00000060688 SNRNP40 -571836 sc-eQTL 6.52e-01 0.0361 0.0798 0.385 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 3.72e-01 0.0795 0.0888 0.385 cMono_IL1B L2
ENSG00000134644 PUM1 -341039 sc-eQTL 4.38e-01 -0.0467 0.0602 0.385 cMono_IL1B L2
ENSG00000162511 LAPTM5 -32822 sc-eQTL 2.43e-01 0.0617 0.0527 0.385 cMono_IL1B L2
ENSG00000162512 SDC3 -183806 sc-eQTL 5.08e-01 0.066 0.0995 0.385 cMono_IL1B L2
ENSG00000162517 PEF1 -919944 sc-eQTL 8.59e-01 -0.0145 0.0814 0.385 cMono_IL1B L2
ENSG00000168528 SERINC2 -684613 sc-eQTL 3.43e-01 0.0956 0.101 0.385 cMono_IL1B L2
ENSG00000284543 LINC01226 -781274 sc-eQTL 4.04e-02 -0.182 0.0882 0.385 cMono_IL1B L2
ENSG00000287510 AL137857.1 -6741 sc-eQTL 2.49e-01 0.0958 0.0829 0.385 cMono_IL1B L2
ENSG00000060688 SNRNP40 -571836 sc-eQTL 7.25e-01 0.0292 0.0828 0.385 cMono_S100A L2
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 5.13e-01 -0.0641 0.0978 0.385 cMono_S100A L2
ENSG00000134644 PUM1 -341039 sc-eQTL 1.83e-01 0.0941 0.0704 0.385 cMono_S100A L2
ENSG00000162511 LAPTM5 -32822 sc-eQTL 9.34e-01 -0.00449 0.0544 0.385 cMono_S100A L2
ENSG00000162512 SDC3 -183806 sc-eQTL 9.86e-01 0.0016 0.0939 0.385 cMono_S100A L2
ENSG00000162517 PEF1 -919944 sc-eQTL 8.61e-01 -0.0149 0.0848 0.385 cMono_S100A L2
ENSG00000168528 SERINC2 -684613 sc-eQTL 5.92e-01 0.0533 0.0994 0.385 cMono_S100A L2
ENSG00000284543 LINC01226 -781274 sc-eQTL 4.22e-02 -0.163 0.08 0.385 cMono_S100A L2
ENSG00000287510 AL137857.1 -6741 sc-eQTL 9.46e-01 0.00546 0.0811 0.385 cMono_S100A L2
ENSG00000060688 SNRNP40 -571836 sc-eQTL 5.81e-01 -0.0708 0.128 0.382 gdT L2
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 9.33e-01 -0.00929 0.11 0.382 gdT L2
ENSG00000134644 PUM1 -341039 sc-eQTL 8.84e-01 -0.0166 0.113 0.382 gdT L2
ENSG00000162511 LAPTM5 -32822 sc-eQTL 6.98e-01 0.0479 0.123 0.382 gdT L2
ENSG00000162517 PEF1 -919944 sc-eQTL 3.49e-01 -0.106 0.112 0.382 gdT L2
ENSG00000186056 MATN1-AS1 6448 sc-eQTL 7.04e-01 -0.0433 0.114 0.382 gdT L2
ENSG00000287510 AL137857.1 -6741 sc-eQTL 8.71e-01 -0.018 0.11 0.382 gdT L2
ENSG00000060688 SNRNP40 -571836 sc-eQTL 3.86e-01 0.0811 0.0933 0.38 intMono L2
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 5.34e-01 0.0626 0.1 0.38 intMono L2
ENSG00000134644 PUM1 -341039 sc-eQTL 5.55e-01 -0.0503 0.0852 0.38 intMono L2
ENSG00000162511 LAPTM5 -32822 sc-eQTL 4.43e-02 0.134 0.0662 0.38 intMono L2
ENSG00000162512 SDC3 -183806 sc-eQTL 2.02e-01 -0.117 0.0912 0.38 intMono L2
ENSG00000162517 PEF1 -919944 sc-eQTL 2.43e-02 0.216 0.0951 0.38 intMono L2
ENSG00000168528 SERINC2 -684613 sc-eQTL 2.10e-01 0.12 0.0955 0.38 intMono L2
ENSG00000284543 LINC01226 -781274 sc-eQTL 9.60e-01 0.00461 0.0909 0.38 intMono L2
ENSG00000287510 AL137857.1 -6741 sc-eQTL 8.21e-01 -0.0206 0.0909 0.38 intMono L2
ENSG00000060688 SNRNP40 -571836 sc-eQTL 9.68e-01 -0.00348 0.0876 0.38 ncMono L2
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 4.61e-02 0.186 0.0925 0.38 ncMono L2
ENSG00000134644 PUM1 -341039 sc-eQTL 6.96e-02 0.138 0.0757 0.38 ncMono L2
ENSG00000162511 LAPTM5 -32822 sc-eQTL 1.50e-01 -0.0996 0.069 0.38 ncMono L2
ENSG00000162512 SDC3 -183806 sc-eQTL 6.21e-01 -0.0385 0.0777 0.38 ncMono L2
ENSG00000162517 PEF1 -919944 sc-eQTL 1.47e-01 0.129 0.0887 0.38 ncMono L2
ENSG00000168528 SERINC2 -684613 sc-eQTL 2.25e-01 0.103 0.0845 0.38 ncMono L2
ENSG00000284543 LINC01226 -781274 sc-eQTL 7.35e-01 -0.0287 0.0847 0.38 ncMono L2
ENSG00000287510 AL137857.1 -6741 sc-eQTL 3.12e-01 -0.0889 0.0877 0.38 ncMono L2
ENSG00000060688 SNRNP40 -571836 sc-eQTL 1.33e-01 -0.152 0.101 0.379 pDC L2
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 1.68e-01 0.153 0.111 0.379 pDC L2
ENSG00000134644 PUM1 -341039 sc-eQTL 7.92e-01 -0.0244 0.0924 0.379 pDC L2
ENSG00000162511 LAPTM5 -32822 sc-eQTL 3.27e-01 -0.0842 0.0857 0.379 pDC L2
ENSG00000162517 PEF1 -919944 sc-eQTL 6.72e-01 0.0473 0.111 0.379 pDC L2
ENSG00000168528 SERINC2 -684613 sc-eQTL 8.95e-01 -0.0138 0.104 0.379 pDC L2
ENSG00000284543 LINC01226 -781274 sc-eQTL 2.38e-01 -0.0953 0.0806 0.379 pDC L2
ENSG00000287510 AL137857.1 -6741 sc-eQTL 7.76e-01 -0.0271 0.0952 0.379 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -571836 sc-eQTL 5.10e-01 -0.065 0.0984 0.385 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 4.13e-01 0.0672 0.0819 0.385 B_Memory LOneK1K
ENSG00000134644 PUM1 -341039 sc-eQTL 8.90e-01 0.0101 0.0727 0.385 B_Memory LOneK1K
ENSG00000162510 MATN1 1367 sc-eQTL 7.22e-01 -0.0295 0.0828 0.385 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -32822 sc-eQTL 3.32e-01 0.0505 0.0519 0.385 B_Memory LOneK1K
ENSG00000162517 PEF1 -919944 sc-eQTL 6.06e-01 0.0446 0.0862 0.385 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 6448 sc-eQTL 8.82e-01 0.0102 0.0688 0.385 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -6741 sc-eQTL 7.13e-01 0.0276 0.075 0.385 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -571836 sc-eQTL 6.03e-01 -0.0468 0.0897 0.385 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 2.14e-01 -0.0881 0.0707 0.385 B_Naive LOneK1K
ENSG00000134644 PUM1 -341039 sc-eQTL 7.18e-01 0.0242 0.0671 0.385 B_Naive LOneK1K
ENSG00000162510 MATN1 1367 sc-eQTL 4.29e-02 -0.13 0.064 0.385 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -32822 sc-eQTL 3.90e-01 0.0391 0.0454 0.385 B_Naive LOneK1K
ENSG00000162517 PEF1 -919944 sc-eQTL 1.19e-01 0.129 0.0826 0.385 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 6448 sc-eQTL 8.64e-01 -0.0101 0.0588 0.385 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -6741 sc-eQTL 3.08e-02 0.15 0.0691 0.385 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -571836 sc-eQTL 3.33e-01 0.0733 0.0755 0.385 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 7.43e-01 0.0281 0.0857 0.385 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -341039 sc-eQTL 5.32e-01 0.0342 0.0546 0.385 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -32822 sc-eQTL 3.55e-01 0.0444 0.048 0.385 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -183806 sc-eQTL 6.73e-01 0.0414 0.098 0.385 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -919944 sc-eQTL 8.47e-01 -0.0134 0.0689 0.385 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -684613 sc-eQTL 3.14e-01 0.102 0.101 0.385 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -781274 sc-eQTL 6.37e-03 -0.224 0.0812 0.385 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -6741 sc-eQTL 3.79e-01 0.0681 0.0773 0.385 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -571836 sc-eQTL 6.52e-01 0.038 0.084 0.384 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 1.28e-01 0.14 0.0915 0.384 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -341039 sc-eQTL 9.19e-01 0.0077 0.0754 0.384 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -32822 sc-eQTL 7.27e-01 0.0211 0.0603 0.384 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -183806 sc-eQTL 7.31e-02 -0.157 0.0874 0.384 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -919944 sc-eQTL 1.22e-01 0.124 0.0795 0.384 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -684613 sc-eQTL 4.10e-01 0.0752 0.0912 0.384 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -781274 sc-eQTL 6.92e-01 -0.0344 0.0866 0.384 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -6741 sc-eQTL 3.03e-01 -0.0893 0.0865 0.384 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -571836 sc-eQTL 1.35e-01 0.136 0.0903 0.384 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -572030 sc-eQTL 9.38e-01 -0.00487 0.062 0.384 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -341039 sc-eQTL 5.82e-01 0.0374 0.0679 0.384 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -32822 sc-eQTL 6.02e-02 0.142 0.0753 0.384 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -919944 sc-eQTL 6.21e-01 0.0285 0.0577 0.384 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 6448 sc-eQTL 7.20e-02 -0.157 0.0869 0.384 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -6741 sc-eQTL 7.89e-02 0.132 0.075 0.384 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162510 MATN1 1367 eQTL 0.00626 -0.053 0.0193 0.0 0.0 0.395
ENSG00000162511 LAPTM5 -32822 eQTL 0.00285 0.0294 0.00983 0.0 0.0 0.395
ENSG00000186056 MATN1-AS1 6448 eQTL 3.44e-02 0.0263 0.0124 0.0 0.0 0.395
ENSG00000284543 LINC01226 -781329 eQTL 0.0307 -0.0676 0.0312 0.0 0.0 0.395

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162510 MATN1 1367 0.000146 0.000138 3.55e-05 7.06e-05 4.33e-05 6.66e-05 0.000171 3.7e-05 0.000149 0.000104 0.000198 8.93e-05 0.000212 6.52e-05 4.28e-05 0.000124 8.02e-05 0.000125 4.7e-05 4.88e-05 0.000106 0.000164 0.000146 6.3e-05 0.000217 6.34e-05 9.23e-05 7.71e-05 0.000142 0.000101 0.000116 1.85e-05 2.53e-05 4.96e-05 5.46e-05 3.62e-05 2.6e-05 2.38e-05 3.65e-05 1.83e-05 1.82e-05 0.00014 1.8e-05 4.09e-06 1.98e-05 3.23e-05 2.66e-05 1.82e-05 1.13e-05
ENSG00000162511 LAPTM5 -32822 1.95e-05 2.83e-05 7.04e-06 1.84e-05 9.39e-06 1.7e-05 4.47e-05 9.91e-06 4e-05 2.34e-05 5.04e-05 2.36e-05 5.86e-05 1.48e-05 8.96e-06 2.6e-05 1.61e-05 3e-05 9.7e-06 1.22e-05 2.44e-05 3.99e-05 3.27e-05 1.32e-05 5.36e-05 1.29e-05 2.16e-05 2.14e-05 3.72e-05 2.32e-05 2.51e-05 2.97e-06 5.36e-06 1.16e-05 1.59e-05 8.29e-06 5.48e-06 5.68e-06 7.25e-06 5.03e-06 2.7e-06 4e-05 3.43e-06 1.24e-06 4.5e-06 7.23e-06 7.62e-06 4.02e-06 3.41e-06