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Genes within 1Mb (chr1:30724198:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -572590 sc-eQTL 1.87e-02 -0.18 0.0758 0.408 B L1
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 7.90e-02 -0.108 0.061 0.408 B L1
ENSG00000134644 PUM1 -341793 sc-eQTL 5.84e-01 -0.0283 0.0515 0.408 B L1
ENSG00000162510 MATN1 613 sc-eQTL 9.88e-01 -0.000846 0.0542 0.408 B L1
ENSG00000162511 LAPTM5 -33576 sc-eQTL 2.45e-01 0.0494 0.0423 0.408 B L1
ENSG00000162517 PEF1 -920698 sc-eQTL 8.78e-01 0.00987 0.0641 0.408 B L1
ENSG00000186056 MATN1-AS1 5694 sc-eQTL 1.57e-01 -0.0703 0.0495 0.408 B L1
ENSG00000287510 AL137857.1 -7495 sc-eQTL 9.80e-02 -0.0973 0.0585 0.408 B L1
ENSG00000060688 SNRNP40 -572590 sc-eQTL 6.91e-01 0.0266 0.0667 0.408 CD4T L1
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 3.36e-01 -0.0502 0.052 0.408 CD4T L1
ENSG00000134644 PUM1 -341793 sc-eQTL 4.64e-01 0.034 0.0464 0.408 CD4T L1
ENSG00000162511 LAPTM5 -33576 sc-eQTL 1.33e-01 0.0773 0.0512 0.408 CD4T L1
ENSG00000162517 PEF1 -920698 sc-eQTL 8.70e-01 -0.00883 0.0538 0.408 CD4T L1
ENSG00000186056 MATN1-AS1 5694 sc-eQTL 4.08e-02 -0.0938 0.0456 0.408 CD4T L1
ENSG00000287510 AL137857.1 -7495 sc-eQTL 7.92e-01 -0.0145 0.0551 0.408 CD4T L1
ENSG00000060688 SNRNP40 -572590 sc-eQTL 5.64e-01 -0.0506 0.0876 0.408 CD8T L1
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 2.97e-01 -0.0609 0.0582 0.408 CD8T L1
ENSG00000134644 PUM1 -341793 sc-eQTL 5.89e-02 0.0968 0.051 0.408 CD8T L1
ENSG00000162511 LAPTM5 -33576 sc-eQTL 9.31e-04 0.163 0.0486 0.408 CD8T L1
ENSG00000162517 PEF1 -920698 sc-eQTL 3.92e-01 -0.0526 0.0614 0.408 CD8T L1
ENSG00000186056 MATN1-AS1 5694 sc-eQTL 2.88e-01 -0.0622 0.0583 0.408 CD8T L1
ENSG00000287510 AL137857.1 -7495 sc-eQTL 2.11e-01 0.0918 0.0732 0.408 CD8T L1
ENSG00000060688 SNRNP40 -572590 sc-eQTL 5.06e-02 -0.156 0.0793 0.414 DC L1
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 7.63e-01 -0.0286 0.0948 0.414 DC L1
ENSG00000134644 PUM1 -341793 sc-eQTL 9.93e-01 -0.000692 0.0743 0.414 DC L1
ENSG00000162511 LAPTM5 -33576 sc-eQTL 3.12e-01 0.0536 0.0529 0.414 DC L1
ENSG00000162517 PEF1 -920698 sc-eQTL 7.10e-01 0.032 0.086 0.414 DC L1
ENSG00000168528 SERINC2 -685367 sc-eQTL 6.42e-01 -0.0407 0.0874 0.414 DC L1
ENSG00000284543 LINC01226 -782028 sc-eQTL 2.95e-01 0.0607 0.0578 0.414 DC L1
ENSG00000287510 AL137857.1 -7495 sc-eQTL 4.71e-01 -0.0605 0.0838 0.414 DC L1
ENSG00000060688 SNRNP40 -572590 sc-eQTL 5.30e-01 -0.0382 0.0606 0.408 Mono L1
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 4.56e-01 -0.0561 0.0751 0.408 Mono L1
ENSG00000134644 PUM1 -341793 sc-eQTL 6.94e-01 -0.019 0.0482 0.408 Mono L1
ENSG00000162511 LAPTM5 -33576 sc-eQTL 7.85e-01 0.0121 0.0443 0.408 Mono L1
ENSG00000162512 SDC3 -184560 sc-eQTL 1.62e-01 -0.119 0.0848 0.408 Mono L1
ENSG00000162517 PEF1 -920698 sc-eQTL 3.39e-01 -0.0571 0.0596 0.408 Mono L1
ENSG00000168528 SERINC2 -685367 sc-eQTL 4.58e-01 -0.0679 0.0913 0.408 Mono L1
ENSG00000284543 LINC01226 -782028 sc-eQTL 6.23e-02 0.15 0.0799 0.408 Mono L1
ENSG00000287510 AL137857.1 -7495 sc-eQTL 5.31e-02 0.136 0.0698 0.408 Mono L1
ENSG00000060688 SNRNP40 -572590 sc-eQTL 7.24e-01 0.0298 0.0842 0.41 NK L1
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 1.20e-01 -0.0895 0.0573 0.41 NK L1
ENSG00000134644 PUM1 -341793 sc-eQTL 5.93e-01 0.0324 0.0605 0.41 NK L1
ENSG00000162511 LAPTM5 -33576 sc-eQTL 4.55e-02 0.139 0.069 0.41 NK L1
ENSG00000162517 PEF1 -920698 sc-eQTL 7.91e-01 -0.0135 0.0508 0.41 NK L1
ENSG00000186056 MATN1-AS1 5694 sc-eQTL 9.92e-01 0.000759 0.0782 0.41 NK L1
ENSG00000287510 AL137857.1 -7495 sc-eQTL 1.95e-01 0.0935 0.0719 0.41 NK L1
ENSG00000060688 SNRNP40 -572590 sc-eQTL 9.59e-01 0.0033 0.0636 0.408 Other_T L1
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 4.85e-01 -0.0475 0.0679 0.408 Other_T L1
ENSG00000134644 PUM1 -341793 sc-eQTL 5.04e-01 -0.0409 0.0611 0.408 Other_T L1
ENSG00000162511 LAPTM5 -33576 sc-eQTL 6.28e-03 0.136 0.0492 0.408 Other_T L1
ENSG00000162517 PEF1 -920698 sc-eQTL 4.34e-02 0.135 0.0663 0.408 Other_T L1
ENSG00000186056 MATN1-AS1 5694 sc-eQTL 7.58e-01 -0.0253 0.0821 0.408 Other_T L1
ENSG00000287510 AL137857.1 -7495 sc-eQTL 8.95e-01 -0.0113 0.0855 0.408 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -572590 sc-eQTL 7.82e-01 0.0282 0.102 0.411 B_Activated L2
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 5.69e-01 0.0586 0.103 0.411 B_Activated L2
ENSG00000134644 PUM1 -341793 sc-eQTL 3.28e-01 -0.0933 0.0952 0.411 B_Activated L2
ENSG00000162510 MATN1 613 sc-eQTL 4.81e-01 -0.0588 0.0833 0.411 B_Activated L2
ENSG00000162511 LAPTM5 -33576 sc-eQTL 6.58e-01 -0.0258 0.0581 0.411 B_Activated L2
ENSG00000162517 PEF1 -920698 sc-eQTL 9.10e-01 -0.0112 0.099 0.411 B_Activated L2
ENSG00000186056 MATN1-AS1 5694 sc-eQTL 6.88e-01 -0.0377 0.0939 0.411 B_Activated L2
ENSG00000287510 AL137857.1 -7495 sc-eQTL 4.55e-02 -0.165 0.0821 0.411 B_Activated L2
ENSG00000060688 SNRNP40 -572590 sc-eQTL 7.17e-01 -0.0345 0.095 0.41 B_Intermediate L2
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 3.52e-01 -0.0737 0.079 0.41 B_Intermediate L2
ENSG00000134644 PUM1 -341793 sc-eQTL 5.44e-01 -0.0454 0.0746 0.41 B_Intermediate L2
ENSG00000162510 MATN1 613 sc-eQTL 3.89e-01 0.067 0.0776 0.41 B_Intermediate L2
ENSG00000162511 LAPTM5 -33576 sc-eQTL 3.83e-01 0.0416 0.0476 0.41 B_Intermediate L2
ENSG00000162517 PEF1 -920698 sc-eQTL 2.50e-01 0.102 0.0883 0.41 B_Intermediate L2
ENSG00000186056 MATN1-AS1 5694 sc-eQTL 8.55e-01 -0.0123 0.067 0.41 B_Intermediate L2
ENSG00000287510 AL137857.1 -7495 sc-eQTL 2.09e-01 -0.094 0.0747 0.41 B_Intermediate L2
ENSG00000060688 SNRNP40 -572590 sc-eQTL 9.41e-02 -0.154 0.0918 0.407 B_Memory L2
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 5.40e-01 0.0522 0.085 0.407 B_Memory L2
ENSG00000134644 PUM1 -341793 sc-eQTL 2.00e-01 0.0948 0.0738 0.407 B_Memory L2
ENSG00000162510 MATN1 613 sc-eQTL 1.79e-01 0.0952 0.0706 0.407 B_Memory L2
ENSG00000162511 LAPTM5 -33576 sc-eQTL 9.78e-01 0.00174 0.0628 0.407 B_Memory L2
ENSG00000162517 PEF1 -920698 sc-eQTL 5.16e-01 0.0545 0.0838 0.407 B_Memory L2
ENSG00000186056 MATN1-AS1 5694 sc-eQTL 9.15e-01 -0.00764 0.0719 0.407 B_Memory L2
ENSG00000287510 AL137857.1 -7495 sc-eQTL 8.62e-02 0.144 0.0836 0.407 B_Memory L2
ENSG00000060688 SNRNP40 -572590 sc-eQTL 5.88e-01 -0.0459 0.0845 0.408 B_Naive1 L2
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 3.42e-01 -0.0694 0.0729 0.408 B_Naive1 L2
ENSG00000134644 PUM1 -341793 sc-eQTL 7.80e-01 -0.018 0.0644 0.408 B_Naive1 L2
ENSG00000162510 MATN1 613 sc-eQTL 5.77e-01 0.0365 0.0653 0.408 B_Naive1 L2
ENSG00000162511 LAPTM5 -33576 sc-eQTL 1.75e-01 0.0591 0.0435 0.408 B_Naive1 L2
ENSG00000162517 PEF1 -920698 sc-eQTL 8.00e-01 0.0196 0.077 0.408 B_Naive1 L2
ENSG00000186056 MATN1-AS1 5694 sc-eQTL 2.71e-01 -0.0631 0.0572 0.408 B_Naive1 L2
ENSG00000287510 AL137857.1 -7495 sc-eQTL 7.40e-01 -0.0235 0.0708 0.408 B_Naive1 L2
ENSG00000060688 SNRNP40 -572590 sc-eQTL 2.86e-04 -0.32 0.0868 0.408 B_Naive2 L2
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 1.27e-02 -0.183 0.0729 0.408 B_Naive2 L2
ENSG00000134644 PUM1 -341793 sc-eQTL 5.57e-01 -0.0426 0.0723 0.408 B_Naive2 L2
ENSG00000162510 MATN1 613 sc-eQTL 8.10e-01 -0.0168 0.0695 0.408 B_Naive2 L2
ENSG00000162511 LAPTM5 -33576 sc-eQTL 2.81e-01 0.0508 0.047 0.408 B_Naive2 L2
ENSG00000162517 PEF1 -920698 sc-eQTL 1.15e-01 -0.135 0.0853 0.408 B_Naive2 L2
ENSG00000186056 MATN1-AS1 5694 sc-eQTL 1.02e-01 -0.112 0.0683 0.408 B_Naive2 L2
ENSG00000287510 AL137857.1 -7495 sc-eQTL 3.54e-01 -0.0688 0.0741 0.408 B_Naive2 L2
ENSG00000060688 SNRNP40 -572590 sc-eQTL 1.24e-01 0.138 0.0893 0.409 CD4_CTL L2
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 8.06e-01 0.0218 0.0884 0.409 CD4_CTL L2
ENSG00000134644 PUM1 -341793 sc-eQTL 7.65e-01 -0.0259 0.0866 0.409 CD4_CTL L2
ENSG00000162511 LAPTM5 -33576 sc-eQTL 4.45e-02 0.155 0.0765 0.409 CD4_CTL L2
ENSG00000162517 PEF1 -920698 sc-eQTL 3.34e-01 0.0765 0.079 0.409 CD4_CTL L2
ENSG00000186056 MATN1-AS1 5694 sc-eQTL 6.65e-01 0.0366 0.0845 0.409 CD4_CTL L2
ENSG00000287510 AL137857.1 -7495 sc-eQTL 3.71e-01 0.0667 0.0744 0.409 CD4_CTL L2
ENSG00000060688 SNRNP40 -572590 sc-eQTL 2.00e-01 -0.0901 0.0701 0.408 CD4_Naive L2
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 2.20e-01 -0.0765 0.0621 0.408 CD4_Naive L2
ENSG00000134644 PUM1 -341793 sc-eQTL 4.92e-01 0.0342 0.0497 0.408 CD4_Naive L2
ENSG00000162511 LAPTM5 -33576 sc-eQTL 4.06e-01 0.0443 0.0533 0.408 CD4_Naive L2
ENSG00000162517 PEF1 -920698 sc-eQTL 2.19e-01 -0.0719 0.0583 0.408 CD4_Naive L2
ENSG00000186056 MATN1-AS1 5694 sc-eQTL 4.41e-03 -0.153 0.0531 0.408 CD4_Naive L2
ENSG00000287510 AL137857.1 -7495 sc-eQTL 7.49e-01 -0.0199 0.0622 0.408 CD4_Naive L2
ENSG00000060688 SNRNP40 -572590 sc-eQTL 3.83e-01 0.0764 0.0874 0.408 CD4_TCM L2
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 6.78e-01 -0.0293 0.0706 0.408 CD4_TCM L2
ENSG00000134644 PUM1 -341793 sc-eQTL 2.39e-01 0.0735 0.0623 0.408 CD4_TCM L2
ENSG00000162511 LAPTM5 -33576 sc-eQTL 1.66e-02 0.124 0.0511 0.408 CD4_TCM L2
ENSG00000162517 PEF1 -920698 sc-eQTL 9.64e-01 0.00312 0.0695 0.408 CD4_TCM L2
ENSG00000186056 MATN1-AS1 5694 sc-eQTL 3.86e-01 -0.057 0.0657 0.408 CD4_TCM L2
ENSG00000287510 AL137857.1 -7495 sc-eQTL 8.52e-01 0.0137 0.0733 0.408 CD4_TCM L2
ENSG00000060688 SNRNP40 -572590 sc-eQTL 7.45e-01 0.0283 0.087 0.408 CD4_TEM L2
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 1.62e-01 0.116 0.0826 0.408 CD4_TEM L2
ENSG00000134644 PUM1 -341793 sc-eQTL 7.54e-01 0.0217 0.0691 0.408 CD4_TEM L2
ENSG00000162511 LAPTM5 -33576 sc-eQTL 2.40e-01 0.0821 0.0696 0.408 CD4_TEM L2
ENSG00000162517 PEF1 -920698 sc-eQTL 9.20e-01 -0.00783 0.0783 0.408 CD4_TEM L2
ENSG00000186056 MATN1-AS1 5694 sc-eQTL 9.91e-01 -0.000892 0.0817 0.408 CD4_TEM L2
ENSG00000287510 AL137857.1 -7495 sc-eQTL 4.43e-01 0.0619 0.0804 0.408 CD4_TEM L2
ENSG00000060688 SNRNP40 -572590 sc-eQTL 6.42e-01 -0.0446 0.0959 0.408 CD8_CTL L2
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 1.79e-01 -0.0987 0.0732 0.408 CD8_CTL L2
ENSG00000134644 PUM1 -341793 sc-eQTL 7.28e-02 0.128 0.0709 0.408 CD8_CTL L2
ENSG00000162511 LAPTM5 -33576 sc-eQTL 5.71e-02 0.15 0.0784 0.408 CD8_CTL L2
ENSG00000162517 PEF1 -920698 sc-eQTL 2.52e-01 0.0788 0.0687 0.408 CD8_CTL L2
ENSG00000186056 MATN1-AS1 5694 sc-eQTL 3.31e-02 -0.176 0.0823 0.408 CD8_CTL L2
ENSG00000287510 AL137857.1 -7495 sc-eQTL 4.35e-01 0.0611 0.0781 0.408 CD8_CTL L2
ENSG00000060688 SNRNP40 -572590 sc-eQTL 5.30e-01 -0.0544 0.0865 0.408 CD8_Naive L2
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 9.42e-01 -0.00539 0.0746 0.408 CD8_Naive L2
ENSG00000134644 PUM1 -341793 sc-eQTL 8.21e-01 0.0136 0.06 0.408 CD8_Naive L2
ENSG00000162511 LAPTM5 -33576 sc-eQTL 3.06e-03 0.169 0.0564 0.408 CD8_Naive L2
ENSG00000162517 PEF1 -920698 sc-eQTL 2.10e-01 -0.1 0.0797 0.408 CD8_Naive L2
ENSG00000186056 MATN1-AS1 5694 sc-eQTL 4.29e-01 -0.0569 0.0717 0.408 CD8_Naive L2
ENSG00000287510 AL137857.1 -7495 sc-eQTL 2.03e-01 0.0995 0.0779 0.408 CD8_Naive L2
ENSG00000060688 SNRNP40 -572590 sc-eQTL 2.41e-01 0.114 0.0973 0.405 CD8_TCM L2
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 6.45e-01 -0.0412 0.0895 0.405 CD8_TCM L2
ENSG00000134644 PUM1 -341793 sc-eQTL 6.49e-01 0.0384 0.0841 0.405 CD8_TCM L2
ENSG00000162511 LAPTM5 -33576 sc-eQTL 4.89e-01 0.061 0.088 0.405 CD8_TCM L2
ENSG00000162517 PEF1 -920698 sc-eQTL 1.49e-01 -0.13 0.0895 0.405 CD8_TCM L2
ENSG00000186056 MATN1-AS1 5694 sc-eQTL 7.24e-01 -0.0288 0.0815 0.405 CD8_TCM L2
ENSG00000287510 AL137857.1 -7495 sc-eQTL 1.24e-01 0.126 0.0819 0.405 CD8_TCM L2
ENSG00000060688 SNRNP40 -572590 sc-eQTL 4.71e-01 -0.0655 0.0906 0.411 CD8_TEM L2
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 8.77e-01 -0.0134 0.087 0.411 CD8_TEM L2
ENSG00000134644 PUM1 -341793 sc-eQTL 9.53e-01 0.00524 0.0889 0.411 CD8_TEM L2
ENSG00000162511 LAPTM5 -33576 sc-eQTL 3.31e-01 0.0813 0.0834 0.411 CD8_TEM L2
ENSG00000162517 PEF1 -920698 sc-eQTL 1.57e-01 -0.111 0.0783 0.411 CD8_TEM L2
ENSG00000186056 MATN1-AS1 5694 sc-eQTL 3.55e-01 -0.0804 0.0866 0.411 CD8_TEM L2
ENSG00000287510 AL137857.1 -7495 sc-eQTL 1.34e-01 -0.118 0.0781 0.411 CD8_TEM L2
ENSG00000060688 SNRNP40 -572590 sc-eQTL 6.90e-01 -0.0372 0.0931 0.407 MAIT L2
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 4.99e-01 0.0558 0.0824 0.407 MAIT L2
ENSG00000134644 PUM1 -341793 sc-eQTL 9.02e-01 -0.00978 0.0791 0.407 MAIT L2
ENSG00000162511 LAPTM5 -33576 sc-eQTL 6.70e-02 0.136 0.074 0.407 MAIT L2
ENSG00000162517 PEF1 -920698 sc-eQTL 5.84e-01 0.0449 0.082 0.407 MAIT L2
ENSG00000186056 MATN1-AS1 5694 sc-eQTL 8.80e-01 -0.0126 0.0831 0.407 MAIT L2
ENSG00000287510 AL137857.1 -7495 sc-eQTL 3.35e-01 -0.0826 0.0855 0.407 MAIT L2
ENSG00000060688 SNRNP40 -572590 sc-eQTL 3.70e-01 0.0839 0.0935 0.409 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 6.41e-02 -0.146 0.0785 0.409 NK_CD56bright L2
ENSG00000134644 PUM1 -341793 sc-eQTL 8.56e-01 0.0151 0.0831 0.409 NK_CD56bright L2
ENSG00000162511 LAPTM5 -33576 sc-eQTL 4.43e-01 0.063 0.0819 0.409 NK_CD56bright L2
ENSG00000162517 PEF1 -920698 sc-eQTL 9.04e-01 0.00959 0.0796 0.409 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 5694 sc-eQTL 1.03e-01 -0.134 0.0818 0.409 NK_CD56bright L2
ENSG00000287510 AL137857.1 -7495 sc-eQTL 2.02e-01 -0.103 0.0808 0.409 NK_CD56bright L2
ENSG00000060688 SNRNP40 -572590 sc-eQTL 9.37e-01 -0.00708 0.089 0.412 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 3.87e-01 -0.0569 0.0657 0.412 NK_CD56dim L2
ENSG00000134644 PUM1 -341793 sc-eQTL 9.23e-01 0.00652 0.0675 0.412 NK_CD56dim L2
ENSG00000162511 LAPTM5 -33576 sc-eQTL 6.63e-02 0.132 0.0714 0.412 NK_CD56dim L2
ENSG00000162517 PEF1 -920698 sc-eQTL 7.32e-01 -0.0219 0.0641 0.412 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 5694 sc-eQTL 7.72e-01 0.0262 0.0902 0.412 NK_CD56dim L2
ENSG00000287510 AL137857.1 -7495 sc-eQTL 3.20e-02 0.159 0.0736 0.412 NK_CD56dim L2
ENSG00000060688 SNRNP40 -572590 sc-eQTL 6.01e-01 0.049 0.0936 0.413 NK_HLA L2
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 6.68e-01 -0.0359 0.0836 0.413 NK_HLA L2
ENSG00000134644 PUM1 -341793 sc-eQTL 6.31e-01 0.0392 0.0815 0.413 NK_HLA L2
ENSG00000162511 LAPTM5 -33576 sc-eQTL 5.84e-04 0.264 0.0755 0.413 NK_HLA L2
ENSG00000162517 PEF1 -920698 sc-eQTL 4.05e-01 -0.073 0.0875 0.413 NK_HLA L2
ENSG00000186056 MATN1-AS1 5694 sc-eQTL 6.23e-01 0.0408 0.0827 0.413 NK_HLA L2
ENSG00000287510 AL137857.1 -7495 sc-eQTL 5.09e-01 0.0528 0.0799 0.413 NK_HLA L2
ENSG00000060688 SNRNP40 -572590 sc-eQTL 7.24e-01 -0.0307 0.0867 0.412 NK_cytokine L2
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 8.71e-01 0.011 0.0677 0.412 NK_cytokine L2
ENSG00000134644 PUM1 -341793 sc-eQTL 4.97e-01 0.0498 0.0731 0.412 NK_cytokine L2
ENSG00000162511 LAPTM5 -33576 sc-eQTL 5.33e-02 0.155 0.0799 0.412 NK_cytokine L2
ENSG00000162517 PEF1 -920698 sc-eQTL 6.02e-01 0.0358 0.0686 0.412 NK_cytokine L2
ENSG00000186056 MATN1-AS1 5694 sc-eQTL 6.26e-01 0.0417 0.0854 0.412 NK_cytokine L2
ENSG00000287510 AL137857.1 -7495 sc-eQTL 7.08e-01 -0.0298 0.0794 0.412 NK_cytokine L2
ENSG00000060688 SNRNP40 -572590 sc-eQTL 7.54e-02 -0.186 0.103 0.4 PB L2
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 9.92e-01 -0.00125 0.122 0.4 PB L2
ENSG00000134644 PUM1 -341793 sc-eQTL 8.18e-01 -0.0244 0.106 0.4 PB L2
ENSG00000162510 MATN1 613 sc-eQTL 8.72e-01 -0.0159 0.0985 0.4 PB L2
ENSG00000162511 LAPTM5 -33576 sc-eQTL 5.86e-01 0.0384 0.0703 0.4 PB L2
ENSG00000162517 PEF1 -920698 sc-eQTL 8.42e-01 -0.0217 0.108 0.4 PB L2
ENSG00000186056 MATN1-AS1 5694 sc-eQTL 2.56e-01 0.109 0.0957 0.4 PB L2
ENSG00000287510 AL137857.1 -7495 sc-eQTL 6.62e-01 -0.0449 0.102 0.4 PB L2
ENSG00000060688 SNRNP40 -572590 sc-eQTL 3.56e-01 -0.0637 0.0688 0.404 Pro_T L2
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 3.20e-02 -0.187 0.0866 0.404 Pro_T L2
ENSG00000134644 PUM1 -341793 sc-eQTL 4.33e-01 -0.0641 0.0816 0.404 Pro_T L2
ENSG00000162511 LAPTM5 -33576 sc-eQTL 5.41e-02 0.112 0.0581 0.404 Pro_T L2
ENSG00000162517 PEF1 -920698 sc-eQTL 3.21e-01 -0.0853 0.0858 0.404 Pro_T L2
ENSG00000186056 MATN1-AS1 5694 sc-eQTL 4.39e-01 0.0634 0.0818 0.404 Pro_T L2
ENSG00000287510 AL137857.1 -7495 sc-eQTL 8.19e-01 -0.0172 0.0753 0.404 Pro_T L2
ENSG00000060688 SNRNP40 -572590 sc-eQTL 7.50e-01 0.0289 0.0905 0.408 Treg L2
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 3.12e-01 0.0886 0.0874 0.408 Treg L2
ENSG00000134644 PUM1 -341793 sc-eQTL 5.42e-01 0.0428 0.07 0.408 Treg L2
ENSG00000162511 LAPTM5 -33576 sc-eQTL 9.51e-02 0.134 0.0797 0.408 Treg L2
ENSG00000162517 PEF1 -920698 sc-eQTL 6.30e-01 -0.0418 0.0866 0.408 Treg L2
ENSG00000186056 MATN1-AS1 5694 sc-eQTL 2.84e-01 0.0876 0.0815 0.408 Treg L2
ENSG00000287510 AL137857.1 -7495 sc-eQTL 5.16e-01 -0.0531 0.0816 0.408 Treg L2
ENSG00000060688 SNRNP40 -572590 sc-eQTL 1.49e-01 -0.139 0.0957 0.42 cDC L2
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 7.64e-01 -0.0313 0.104 0.42 cDC L2
ENSG00000134644 PUM1 -341793 sc-eQTL 1.68e-01 0.123 0.089 0.42 cDC L2
ENSG00000162511 LAPTM5 -33576 sc-eQTL 9.01e-01 -0.00782 0.0627 0.42 cDC L2
ENSG00000162517 PEF1 -920698 sc-eQTL 4.59e-01 0.0674 0.0907 0.42 cDC L2
ENSG00000168528 SERINC2 -685367 sc-eQTL 5.23e-01 -0.0515 0.0804 0.42 cDC L2
ENSG00000284543 LINC01226 -782028 sc-eQTL 7.23e-01 -0.0281 0.0791 0.42 cDC L2
ENSG00000287510 AL137857.1 -7495 sc-eQTL 1.27e-01 -0.13 0.0846 0.42 cDC L2
ENSG00000060688 SNRNP40 -572590 sc-eQTL 1.82e-01 -0.0986 0.0736 0.408 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 4.26e-01 -0.0658 0.0824 0.408 cMono_IL1B L2
ENSG00000134644 PUM1 -341793 sc-eQTL 8.12e-01 0.0133 0.0558 0.408 cMono_IL1B L2
ENSG00000162511 LAPTM5 -33576 sc-eQTL 6.95e-01 -0.0192 0.049 0.408 cMono_IL1B L2
ENSG00000162512 SDC3 -184560 sc-eQTL 3.09e-01 -0.094 0.0921 0.408 cMono_IL1B L2
ENSG00000162517 PEF1 -920698 sc-eQTL 3.27e-01 0.074 0.0753 0.408 cMono_IL1B L2
ENSG00000168528 SERINC2 -685367 sc-eQTL 8.57e-01 -0.0169 0.0934 0.408 cMono_IL1B L2
ENSG00000284543 LINC01226 -782028 sc-eQTL 1.02e-01 0.135 0.0821 0.408 cMono_IL1B L2
ENSG00000287510 AL137857.1 -7495 sc-eQTL 1.19e-01 0.12 0.0766 0.408 cMono_IL1B L2
ENSG00000060688 SNRNP40 -572590 sc-eQTL 5.70e-01 0.0439 0.0771 0.408 cMono_S100A L2
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 7.65e-01 0.0273 0.0911 0.408 cMono_S100A L2
ENSG00000134644 PUM1 -341793 sc-eQTL 2.43e-01 -0.0769 0.0657 0.408 cMono_S100A L2
ENSG00000162511 LAPTM5 -33576 sc-eQTL 5.18e-01 -0.0328 0.0506 0.408 cMono_S100A L2
ENSG00000162512 SDC3 -184560 sc-eQTL 1.92e-01 -0.114 0.0871 0.408 cMono_S100A L2
ENSG00000162517 PEF1 -920698 sc-eQTL 1.36e-01 -0.118 0.0786 0.408 cMono_S100A L2
ENSG00000168528 SERINC2 -685367 sc-eQTL 3.00e-01 -0.096 0.0924 0.408 cMono_S100A L2
ENSG00000284543 LINC01226 -782028 sc-eQTL 3.60e-01 0.0689 0.0751 0.408 cMono_S100A L2
ENSG00000287510 AL137857.1 -7495 sc-eQTL 5.77e-01 0.0422 0.0755 0.408 cMono_S100A L2
ENSG00000060688 SNRNP40 -572590 sc-eQTL 3.93e-01 0.0991 0.116 0.406 gdT L2
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 4.04e-01 0.0831 0.0993 0.406 gdT L2
ENSG00000134644 PUM1 -341793 sc-eQTL 9.07e-01 -0.012 0.103 0.406 gdT L2
ENSG00000162511 LAPTM5 -33576 sc-eQTL 2.53e-01 0.128 0.111 0.406 gdT L2
ENSG00000162517 PEF1 -920698 sc-eQTL 2.98e-01 0.106 0.102 0.406 gdT L2
ENSG00000186056 MATN1-AS1 5694 sc-eQTL 4.19e-01 -0.0832 0.103 0.406 gdT L2
ENSG00000287510 AL137857.1 -7495 sc-eQTL 4.75e-01 -0.0713 0.0995 0.406 gdT L2
ENSG00000060688 SNRNP40 -572590 sc-eQTL 8.41e-01 0.0173 0.0858 0.413 intMono L2
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 8.83e-01 -0.0136 0.0923 0.413 intMono L2
ENSG00000134644 PUM1 -341793 sc-eQTL 5.53e-02 -0.15 0.0776 0.413 intMono L2
ENSG00000162511 LAPTM5 -33576 sc-eQTL 4.55e-02 0.122 0.0608 0.413 intMono L2
ENSG00000162512 SDC3 -184560 sc-eQTL 2.10e-01 -0.105 0.0838 0.413 intMono L2
ENSG00000162517 PEF1 -920698 sc-eQTL 8.14e-01 -0.0208 0.0884 0.413 intMono L2
ENSG00000168528 SERINC2 -685367 sc-eQTL 5.89e-01 -0.0477 0.088 0.413 intMono L2
ENSG00000284543 LINC01226 -782028 sc-eQTL 7.63e-02 0.147 0.0828 0.413 intMono L2
ENSG00000287510 AL137857.1 -7495 sc-eQTL 3.37e-01 0.0802 0.0833 0.413 intMono L2
ENSG00000060688 SNRNP40 -572590 sc-eQTL 4.46e-01 0.0626 0.082 0.405 ncMono L2
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 2.92e-01 -0.0923 0.0873 0.405 ncMono L2
ENSG00000134644 PUM1 -341793 sc-eQTL 1.03e-01 -0.117 0.0711 0.405 ncMono L2
ENSG00000162511 LAPTM5 -33576 sc-eQTL 2.69e-01 0.0718 0.0648 0.405 ncMono L2
ENSG00000162512 SDC3 -184560 sc-eQTL 4.75e-01 -0.0521 0.0728 0.405 ncMono L2
ENSG00000162517 PEF1 -920698 sc-eQTL 2.90e-02 -0.182 0.0825 0.405 ncMono L2
ENSG00000168528 SERINC2 -685367 sc-eQTL 9.68e-01 0.00322 0.0795 0.405 ncMono L2
ENSG00000284543 LINC01226 -782028 sc-eQTL 9.08e-01 -0.00923 0.0794 0.405 ncMono L2
ENSG00000287510 AL137857.1 -7495 sc-eQTL 2.87e-01 0.0876 0.0821 0.405 ncMono L2
ENSG00000060688 SNRNP40 -572590 sc-eQTL 1.72e-01 -0.122 0.0888 0.41 pDC L2
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 5.64e-01 0.0567 0.098 0.41 pDC L2
ENSG00000134644 PUM1 -341793 sc-eQTL 3.16e-01 -0.0816 0.0811 0.41 pDC L2
ENSG00000162511 LAPTM5 -33576 sc-eQTL 2.94e-01 0.0793 0.0753 0.41 pDC L2
ENSG00000162517 PEF1 -920698 sc-eQTL 7.30e-01 -0.0339 0.0981 0.41 pDC L2
ENSG00000168528 SERINC2 -685367 sc-eQTL 4.10e-01 0.0756 0.0915 0.41 pDC L2
ENSG00000284543 LINC01226 -782028 sc-eQTL 3.44e-01 0.0673 0.071 0.41 pDC L2
ENSG00000287510 AL137857.1 -7495 sc-eQTL 8.43e-01 -0.0166 0.0837 0.41 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -572590 sc-eQTL 2.94e-01 -0.0946 0.09 0.408 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 7.96e-01 -0.0194 0.0751 0.408 B_Memory LOneK1K
ENSG00000134644 PUM1 -341793 sc-eQTL 5.17e-01 0.0432 0.0665 0.408 B_Memory LOneK1K
ENSG00000162510 MATN1 613 sc-eQTL 3.43e-01 0.0719 0.0757 0.408 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -33576 sc-eQTL 5.91e-01 0.0256 0.0476 0.408 B_Memory LOneK1K
ENSG00000162517 PEF1 -920698 sc-eQTL 1.40e-01 0.116 0.0786 0.408 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 5694 sc-eQTL 6.12e-01 -0.032 0.063 0.408 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -7495 sc-eQTL 3.90e-01 -0.0591 0.0686 0.408 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -572590 sc-eQTL 1.40e-02 -0.2 0.0807 0.408 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 5.03e-02 -0.126 0.0642 0.408 B_Naive LOneK1K
ENSG00000134644 PUM1 -341793 sc-eQTL 7.01e-01 -0.0235 0.0612 0.408 B_Naive LOneK1K
ENSG00000162510 MATN1 613 sc-eQTL 8.48e-01 0.0113 0.059 0.408 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -33576 sc-eQTL 1.21e-01 0.0643 0.0413 0.408 B_Naive LOneK1K
ENSG00000162517 PEF1 -920698 sc-eQTL 6.58e-01 -0.0336 0.0758 0.408 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 5694 sc-eQTL 1.79e-01 -0.0719 0.0534 0.408 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -7495 sc-eQTL 5.45e-01 -0.0386 0.0636 0.408 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -572590 sc-eQTL 2.69e-01 -0.077 0.0695 0.408 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 5.79e-01 -0.0438 0.0789 0.408 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -341793 sc-eQTL 6.70e-01 -0.0215 0.0503 0.408 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -33576 sc-eQTL 5.11e-01 -0.0291 0.0442 0.408 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -184560 sc-eQTL 1.65e-01 -0.125 0.0899 0.408 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -920698 sc-eQTL 9.88e-01 -0.000934 0.0635 0.408 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -685367 sc-eQTL 4.33e-01 -0.0729 0.0927 0.408 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -782028 sc-eQTL 1.22e-01 0.118 0.0757 0.408 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -7495 sc-eQTL 1.44e-01 0.104 0.0709 0.408 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -572590 sc-eQTL 1.94e-01 0.0988 0.0758 0.412 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 5.22e-01 -0.0534 0.0832 0.412 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -341793 sc-eQTL 1.05e-01 -0.11 0.0678 0.412 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -33576 sc-eQTL 9.80e-02 0.0901 0.0542 0.412 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -184560 sc-eQTL 1.90e-01 -0.105 0.0794 0.412 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -920698 sc-eQTL 3.59e-02 -0.151 0.0717 0.412 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -685367 sc-eQTL 8.96e-01 -0.0109 0.0827 0.412 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -782028 sc-eQTL 3.01e-01 0.0811 0.0783 0.412 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -7495 sc-eQTL 7.42e-02 0.14 0.078 0.412 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -572590 sc-eQTL 8.31e-01 0.0181 0.0847 0.412 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -572784 sc-eQTL 4.12e-01 -0.0475 0.0578 0.412 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -341793 sc-eQTL 5.68e-01 0.0362 0.0633 0.412 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -33576 sc-eQTL 2.32e-02 0.16 0.07 0.412 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -920698 sc-eQTL 9.43e-01 -0.00385 0.0538 0.412 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 5694 sc-eQTL 7.81e-01 0.0228 0.0817 0.412 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -7495 sc-eQTL 1.01e-01 0.115 0.0701 0.412 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162510 MATN1 613 eQTL 0.00215 0.0598 0.0194 0.00221 0.00186 0.394
ENSG00000186056 MATN1-AS1 5694 eQTL 1.31e-04 -0.0477 0.0124 0.0 0.0 0.394

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162510 MATN1 613 0.000215 0.000205 2.93e-05 5.23e-05 2.43e-05 7.34e-05 0.000192 2.48e-05 0.000158 7.3e-05 0.000196 9.71e-05 0.000239 7.46e-05 3.74e-05 0.000141 8.42e-05 0.000108 3.71e-05 2.55e-05 6.77e-05 0.000206 0.000168 4.69e-05 0.00022 5.06e-05 9.23e-05 5.91e-05 0.000138 7.17e-05 0.000121 8.84e-06 1.3e-05 3.32e-05 3.3e-05 1.94e-05 9.6e-06 1.04e-05 1.89e-05 1.17e-05 5.04e-06 0.000225 2.05e-05 5.83e-07 1.3e-05 1.75e-05 1.99e-05 6.73e-06 4.88e-06