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Genes within 1Mb (chr1:30722261:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -574527 sc-eQTL 1.18e-01 -0.132 0.084 0.31 B L1
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 2.17e-01 -0.0834 0.0674 0.31 B L1
ENSG00000134644 PUM1 -343730 sc-eQTL 7.01e-01 -0.0218 0.0567 0.31 B L1
ENSG00000162510 MATN1 -1324 sc-eQTL 7.86e-01 -0.0163 0.0596 0.31 B L1
ENSG00000162511 LAPTM5 -35513 sc-eQTL 4.56e-01 0.0348 0.0467 0.31 B L1
ENSG00000162517 PEF1 -922635 sc-eQTL 8.25e-01 0.0156 0.0705 0.31 B L1
ENSG00000186056 MATN1-AS1 3757 sc-eQTL 1.44e-01 -0.0799 0.0545 0.31 B L1
ENSG00000287510 AL137857.1 -9432 sc-eQTL 8.46e-02 -0.112 0.0643 0.31 B L1
ENSG00000060688 SNRNP40 -574527 sc-eQTL 2.84e-01 0.0777 0.0723 0.31 CD4T L1
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 5.15e-01 -0.0369 0.0566 0.31 CD4T L1
ENSG00000134644 PUM1 -343730 sc-eQTL 8.41e-01 -0.0101 0.0504 0.31 CD4T L1
ENSG00000162511 LAPTM5 -35513 sc-eQTL 6.33e-01 0.0267 0.0559 0.31 CD4T L1
ENSG00000162517 PEF1 -922635 sc-eQTL 7.20e-01 -0.021 0.0584 0.31 CD4T L1
ENSG00000186056 MATN1-AS1 3757 sc-eQTL 4.02e-01 -0.0419 0.0499 0.31 CD4T L1
ENSG00000287510 AL137857.1 -9432 sc-eQTL 4.58e-01 -0.0445 0.0598 0.31 CD4T L1
ENSG00000060688 SNRNP40 -574527 sc-eQTL 7.19e-01 -0.0348 0.0967 0.31 CD8T L1
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 8.32e-01 0.0137 0.0644 0.31 CD8T L1
ENSG00000134644 PUM1 -343730 sc-eQTL 9.05e-01 0.00677 0.0567 0.31 CD8T L1
ENSG00000162511 LAPTM5 -35513 sc-eQTL 1.51e-01 0.0789 0.0548 0.31 CD8T L1
ENSG00000162517 PEF1 -922635 sc-eQTL 1.89e-01 -0.0889 0.0675 0.31 CD8T L1
ENSG00000186056 MATN1-AS1 3757 sc-eQTL 5.82e-01 -0.0355 0.0645 0.31 CD8T L1
ENSG00000287510 AL137857.1 -9432 sc-eQTL 9.09e-01 -0.00929 0.0811 0.31 CD8T L1
ENSG00000060688 SNRNP40 -574527 sc-eQTL 8.35e-02 -0.151 0.0867 0.315 DC L1
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 9.57e-01 -0.00563 0.103 0.315 DC L1
ENSG00000134644 PUM1 -343730 sc-eQTL 9.08e-02 0.137 0.0804 0.315 DC L1
ENSG00000162511 LAPTM5 -35513 sc-eQTL 4.63e-01 0.0425 0.0578 0.315 DC L1
ENSG00000162517 PEF1 -922635 sc-eQTL 9.07e-01 0.011 0.0938 0.315 DC L1
ENSG00000168528 SERINC2 -687304 sc-eQTL 6.41e-01 -0.0445 0.0953 0.315 DC L1
ENSG00000284543 LINC01226 -783965 sc-eQTL 1.79e-01 0.0848 0.0629 0.315 DC L1
ENSG00000287510 AL137857.1 -9432 sc-eQTL 1.79e-01 -0.123 0.0911 0.315 DC L1
ENSG00000060688 SNRNP40 -574527 sc-eQTL 4.76e-01 -0.0478 0.0669 0.31 Mono L1
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 3.38e-01 -0.0796 0.0828 0.31 Mono L1
ENSG00000134644 PUM1 -343730 sc-eQTL 9.01e-01 -0.00661 0.0532 0.31 Mono L1
ENSG00000162511 LAPTM5 -35513 sc-eQTL 7.59e-01 0.015 0.0489 0.31 Mono L1
ENSG00000162512 SDC3 -186497 sc-eQTL 2.64e-01 -0.105 0.0938 0.31 Mono L1
ENSG00000162517 PEF1 -922635 sc-eQTL 2.79e-01 -0.0714 0.0658 0.31 Mono L1
ENSG00000168528 SERINC2 -687304 sc-eQTL 1.81e-01 -0.135 0.101 0.31 Mono L1
ENSG00000284543 LINC01226 -783965 sc-eQTL 1.50e-02 0.215 0.0877 0.31 Mono L1
ENSG00000287510 AL137857.1 -9432 sc-eQTL 3.42e-01 0.0738 0.0775 0.31 Mono L1
ENSG00000060688 SNRNP40 -574527 sc-eQTL 6.81e-01 -0.0378 0.0918 0.311 NK L1
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 2.08e-01 -0.0792 0.0627 0.311 NK L1
ENSG00000134644 PUM1 -343730 sc-eQTL 5.38e-01 0.0406 0.0659 0.311 NK L1
ENSG00000162511 LAPTM5 -35513 sc-eQTL 5.37e-01 -0.0469 0.0759 0.311 NK L1
ENSG00000162517 PEF1 -922635 sc-eQTL 4.33e-01 -0.0435 0.0553 0.311 NK L1
ENSG00000186056 MATN1-AS1 3757 sc-eQTL 6.83e-01 0.0349 0.0853 0.311 NK L1
ENSG00000287510 AL137857.1 -9432 sc-eQTL 9.91e-01 -0.000877 0.0788 0.311 NK L1
ENSG00000060688 SNRNP40 -574527 sc-eQTL 4.88e-01 -0.0482 0.0694 0.31 Other_T L1
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 8.98e-01 -0.00951 0.0743 0.31 Other_T L1
ENSG00000134644 PUM1 -343730 sc-eQTL 2.80e-01 -0.0721 0.0666 0.31 Other_T L1
ENSG00000162511 LAPTM5 -35513 sc-eQTL 4.03e-02 0.112 0.0542 0.31 Other_T L1
ENSG00000162517 PEF1 -922635 sc-eQTL 2.11e-02 0.168 0.0722 0.31 Other_T L1
ENSG00000186056 MATN1-AS1 3757 sc-eQTL 8.11e-01 0.0214 0.0897 0.31 Other_T L1
ENSG00000287510 AL137857.1 -9432 sc-eQTL 2.40e-01 -0.11 0.0931 0.31 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -574527 sc-eQTL 3.38e-01 0.104 0.108 0.321 B_Activated L2
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 2.81e-01 0.118 0.109 0.321 B_Activated L2
ENSG00000134644 PUM1 -343730 sc-eQTL 5.88e-01 -0.055 0.101 0.321 B_Activated L2
ENSG00000162510 MATN1 -1324 sc-eQTL 9.58e-02 -0.147 0.0879 0.321 B_Activated L2
ENSG00000162511 LAPTM5 -35513 sc-eQTL 6.56e-01 -0.0275 0.0618 0.321 B_Activated L2
ENSG00000162517 PEF1 -922635 sc-eQTL 8.34e-01 0.0221 0.105 0.321 B_Activated L2
ENSG00000186056 MATN1-AS1 3757 sc-eQTL 9.22e-01 -0.00972 0.0998 0.321 B_Activated L2
ENSG00000287510 AL137857.1 -9432 sc-eQTL 2.37e-02 -0.199 0.087 0.321 B_Activated L2
ENSG00000060688 SNRNP40 -574527 sc-eQTL 6.97e-01 0.0404 0.104 0.311 B_Intermediate L2
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 4.95e-01 -0.0592 0.0865 0.311 B_Intermediate L2
ENSG00000134644 PUM1 -343730 sc-eQTL 6.88e-01 -0.0328 0.0816 0.311 B_Intermediate L2
ENSG00000162510 MATN1 -1324 sc-eQTL 5.29e-02 0.164 0.0842 0.311 B_Intermediate L2
ENSG00000162511 LAPTM5 -35513 sc-eQTL 9.32e-01 -0.00443 0.0522 0.311 B_Intermediate L2
ENSG00000162517 PEF1 -922635 sc-eQTL 8.31e-01 0.0207 0.0968 0.311 B_Intermediate L2
ENSG00000186056 MATN1-AS1 3757 sc-eQTL 9.16e-01 -0.00777 0.0732 0.311 B_Intermediate L2
ENSG00000287510 AL137857.1 -9432 sc-eQTL 1.11e-01 -0.13 0.0814 0.311 B_Intermediate L2
ENSG00000060688 SNRNP40 -574527 sc-eQTL 4.07e-01 -0.0838 0.101 0.31 B_Memory L2
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 5.87e-01 0.0507 0.0931 0.31 B_Memory L2
ENSG00000134644 PUM1 -343730 sc-eQTL 1.85e-01 0.107 0.0807 0.31 B_Memory L2
ENSG00000162510 MATN1 -1324 sc-eQTL 7.71e-02 0.137 0.077 0.31 B_Memory L2
ENSG00000162511 LAPTM5 -35513 sc-eQTL 5.79e-01 0.0381 0.0687 0.31 B_Memory L2
ENSG00000162517 PEF1 -922635 sc-eQTL 9.41e-01 0.00678 0.0918 0.31 B_Memory L2
ENSG00000186056 MATN1-AS1 3757 sc-eQTL 8.06e-01 0.0193 0.0787 0.31 B_Memory L2
ENSG00000287510 AL137857.1 -9432 sc-eQTL 3.21e-01 0.0915 0.0919 0.31 B_Memory L2
ENSG00000060688 SNRNP40 -574527 sc-eQTL 4.89e-01 -0.0641 0.0924 0.31 B_Naive1 L2
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 9.91e-01 0.000912 0.0799 0.31 B_Naive1 L2
ENSG00000134644 PUM1 -343730 sc-eQTL 2.71e-01 -0.0776 0.0703 0.31 B_Naive1 L2
ENSG00000162510 MATN1 -1324 sc-eQTL 8.57e-01 -0.0129 0.0715 0.31 B_Naive1 L2
ENSG00000162511 LAPTM5 -35513 sc-eQTL 4.64e-01 0.035 0.0477 0.31 B_Naive1 L2
ENSG00000162517 PEF1 -922635 sc-eQTL 8.93e-01 0.0113 0.0842 0.31 B_Naive1 L2
ENSG00000186056 MATN1-AS1 3757 sc-eQTL 3.12e-01 -0.0634 0.0626 0.31 B_Naive1 L2
ENSG00000287510 AL137857.1 -9432 sc-eQTL 6.51e-01 -0.0351 0.0775 0.31 B_Naive1 L2
ENSG00000060688 SNRNP40 -574527 sc-eQTL 2.89e-02 -0.214 0.0971 0.309 B_Naive2 L2
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 1.53e-03 -0.254 0.0792 0.309 B_Naive2 L2
ENSG00000134644 PUM1 -343730 sc-eQTL 8.05e-01 0.0196 0.0793 0.309 B_Naive2 L2
ENSG00000162510 MATN1 -1324 sc-eQTL 8.84e-01 -0.0111 0.0762 0.309 B_Naive2 L2
ENSG00000162511 LAPTM5 -35513 sc-eQTL 5.79e-01 0.0288 0.0517 0.309 B_Naive2 L2
ENSG00000162517 PEF1 -922635 sc-eQTL 3.33e-01 -0.0911 0.0939 0.309 B_Naive2 L2
ENSG00000186056 MATN1-AS1 3757 sc-eQTL 3.10e-01 -0.0765 0.0751 0.309 B_Naive2 L2
ENSG00000287510 AL137857.1 -9432 sc-eQTL 1.48e-01 -0.118 0.081 0.309 B_Naive2 L2
ENSG00000060688 SNRNP40 -574527 sc-eQTL 7.77e-01 0.0281 0.099 0.309 CD4_CTL L2
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 3.17e-01 0.0975 0.0972 0.309 CD4_CTL L2
ENSG00000134644 PUM1 -343730 sc-eQTL 8.73e-01 0.0153 0.0955 0.309 CD4_CTL L2
ENSG00000162511 LAPTM5 -35513 sc-eQTL 7.49e-01 0.0273 0.0851 0.309 CD4_CTL L2
ENSG00000162517 PEF1 -922635 sc-eQTL 4.84e-01 0.0612 0.0872 0.309 CD4_CTL L2
ENSG00000186056 MATN1-AS1 3757 sc-eQTL 5.24e-01 0.0594 0.0931 0.309 CD4_CTL L2
ENSG00000287510 AL137857.1 -9432 sc-eQTL 3.34e-01 0.0794 0.082 0.309 CD4_CTL L2
ENSG00000060688 SNRNP40 -574527 sc-eQTL 6.57e-01 -0.034 0.0765 0.31 CD4_Naive L2
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 2.40e-01 -0.0797 0.0676 0.31 CD4_Naive L2
ENSG00000134644 PUM1 -343730 sc-eQTL 9.87e-01 -0.000914 0.0542 0.31 CD4_Naive L2
ENSG00000162511 LAPTM5 -35513 sc-eQTL 9.80e-01 -0.00143 0.0581 0.31 CD4_Naive L2
ENSG00000162517 PEF1 -922635 sc-eQTL 4.03e-01 -0.0532 0.0636 0.31 CD4_Naive L2
ENSG00000186056 MATN1-AS1 3757 sc-eQTL 6.13e-02 -0.11 0.0584 0.31 CD4_Naive L2
ENSG00000287510 AL137857.1 -9432 sc-eQTL 9.21e-01 0.00672 0.0677 0.31 CD4_Naive L2
ENSG00000060688 SNRNP40 -574527 sc-eQTL 9.92e-02 0.157 0.0951 0.31 CD4_TCM L2
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 7.23e-01 0.0274 0.0771 0.31 CD4_TCM L2
ENSG00000134644 PUM1 -343730 sc-eQTL 8.33e-01 -0.0144 0.0683 0.31 CD4_TCM L2
ENSG00000162511 LAPTM5 -35513 sc-eQTL 2.60e-01 0.0638 0.0565 0.31 CD4_TCM L2
ENSG00000162517 PEF1 -922635 sc-eQTL 8.73e-01 -0.0121 0.0759 0.31 CD4_TCM L2
ENSG00000186056 MATN1-AS1 3757 sc-eQTL 8.84e-01 0.0105 0.0719 0.31 CD4_TCM L2
ENSG00000287510 AL137857.1 -9432 sc-eQTL 2.62e-01 -0.0897 0.0798 0.31 CD4_TCM L2
ENSG00000060688 SNRNP40 -574527 sc-eQTL 3.40e-01 0.0902 0.0943 0.31 CD4_TEM L2
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 2.81e-01 0.0971 0.0898 0.31 CD4_TEM L2
ENSG00000134644 PUM1 -343730 sc-eQTL 4.85e-01 -0.0524 0.0749 0.31 CD4_TEM L2
ENSG00000162511 LAPTM5 -35513 sc-eQTL 6.80e-01 -0.0313 0.0758 0.31 CD4_TEM L2
ENSG00000162517 PEF1 -922635 sc-eQTL 9.14e-01 -0.00916 0.085 0.31 CD4_TEM L2
ENSG00000186056 MATN1-AS1 3757 sc-eQTL 7.95e-01 -0.0231 0.0887 0.31 CD4_TEM L2
ENSG00000287510 AL137857.1 -9432 sc-eQTL 1.52e-01 0.125 0.087 0.31 CD4_TEM L2
ENSG00000060688 SNRNP40 -574527 sc-eQTL 9.49e-01 -0.00677 0.106 0.31 CD8_CTL L2
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 1.68e-01 -0.112 0.0807 0.31 CD8_CTL L2
ENSG00000134644 PUM1 -343730 sc-eQTL 1.24e-01 0.121 0.0783 0.31 CD8_CTL L2
ENSG00000162511 LAPTM5 -35513 sc-eQTL 8.22e-01 0.0196 0.0872 0.31 CD8_CTL L2
ENSG00000162517 PEF1 -922635 sc-eQTL 9.31e-01 0.00662 0.0759 0.31 CD8_CTL L2
ENSG00000186056 MATN1-AS1 3757 sc-eQTL 2.02e-01 -0.117 0.0913 0.31 CD8_CTL L2
ENSG00000287510 AL137857.1 -9432 sc-eQTL 7.39e-01 -0.0288 0.0862 0.31 CD8_CTL L2
ENSG00000060688 SNRNP40 -574527 sc-eQTL 7.73e-01 0.0273 0.0946 0.31 CD8_Naive L2
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 2.47e-01 0.0945 0.0813 0.31 CD8_Naive L2
ENSG00000134644 PUM1 -343730 sc-eQTL 1.88e-01 -0.0864 0.0654 0.31 CD8_Naive L2
ENSG00000162511 LAPTM5 -35513 sc-eQTL 1.60e-01 0.0883 0.0626 0.31 CD8_Naive L2
ENSG00000162517 PEF1 -922635 sc-eQTL 5.16e-01 -0.0568 0.0874 0.31 CD8_Naive L2
ENSG00000186056 MATN1-AS1 3757 sc-eQTL 8.66e-01 -0.0132 0.0786 0.31 CD8_Naive L2
ENSG00000287510 AL137857.1 -9432 sc-eQTL 1.69e-01 0.117 0.0851 0.31 CD8_Naive L2
ENSG00000060688 SNRNP40 -574527 sc-eQTL 4.11e-01 0.0874 0.106 0.303 CD8_TCM L2
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 9.48e-01 0.00631 0.0974 0.303 CD8_TCM L2
ENSG00000134644 PUM1 -343730 sc-eQTL 7.56e-01 -0.0285 0.0915 0.303 CD8_TCM L2
ENSG00000162511 LAPTM5 -35513 sc-eQTL 7.26e-01 -0.0336 0.0958 0.303 CD8_TCM L2
ENSG00000162517 PEF1 -922635 sc-eQTL 1.33e-01 -0.147 0.0974 0.303 CD8_TCM L2
ENSG00000186056 MATN1-AS1 3757 sc-eQTL 4.43e-01 0.0681 0.0886 0.303 CD8_TCM L2
ENSG00000287510 AL137857.1 -9432 sc-eQTL 8.24e-02 0.155 0.089 0.303 CD8_TCM L2
ENSG00000060688 SNRNP40 -574527 sc-eQTL 1.97e-01 -0.131 0.101 0.308 CD8_TEM L2
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 9.10e-01 0.011 0.0972 0.308 CD8_TEM L2
ENSG00000134644 PUM1 -343730 sc-eQTL 6.28e-01 -0.0482 0.0993 0.308 CD8_TEM L2
ENSG00000162511 LAPTM5 -35513 sc-eQTL 7.34e-01 -0.0318 0.0934 0.308 CD8_TEM L2
ENSG00000162517 PEF1 -922635 sc-eQTL 1.37e-01 -0.13 0.0875 0.308 CD8_TEM L2
ENSG00000186056 MATN1-AS1 3757 sc-eQTL 2.90e-02 -0.211 0.0958 0.308 CD8_TEM L2
ENSG00000287510 AL137857.1 -9432 sc-eQTL 1.03e-01 -0.143 0.0872 0.308 CD8_TEM L2
ENSG00000060688 SNRNP40 -574527 sc-eQTL 6.73e-01 -0.043 0.102 0.307 MAIT L2
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 2.61e-01 0.101 0.09 0.307 MAIT L2
ENSG00000134644 PUM1 -343730 sc-eQTL 5.74e-01 -0.0487 0.0864 0.307 MAIT L2
ENSG00000162511 LAPTM5 -35513 sc-eQTL 6.98e-01 0.0317 0.0816 0.307 MAIT L2
ENSG00000162517 PEF1 -922635 sc-eQTL 3.87e-01 0.0776 0.0895 0.307 MAIT L2
ENSG00000186056 MATN1-AS1 3757 sc-eQTL 6.88e-01 0.0365 0.0908 0.307 MAIT L2
ENSG00000287510 AL137857.1 -9432 sc-eQTL 1.87e-01 -0.123 0.0933 0.307 MAIT L2
ENSG00000060688 SNRNP40 -574527 sc-eQTL 3.41e-01 0.0979 0.103 0.309 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 9.50e-02 -0.145 0.0863 0.309 NK_CD56bright L2
ENSG00000134644 PUM1 -343730 sc-eQTL 9.11e-01 0.0102 0.0912 0.309 NK_CD56bright L2
ENSG00000162511 LAPTM5 -35513 sc-eQTL 9.21e-01 0.00897 0.09 0.309 NK_CD56bright L2
ENSG00000162517 PEF1 -922635 sc-eQTL 9.73e-01 -0.00295 0.0874 0.309 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 3757 sc-eQTL 2.34e-02 -0.204 0.0893 0.309 NK_CD56bright L2
ENSG00000287510 AL137857.1 -9432 sc-eQTL 6.50e-01 -0.0404 0.089 0.309 NK_CD56bright L2
ENSG00000060688 SNRNP40 -574527 sc-eQTL 5.91e-01 -0.0524 0.0973 0.312 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 1.81e-01 -0.0963 0.0717 0.312 NK_CD56dim L2
ENSG00000134644 PUM1 -343730 sc-eQTL 9.72e-01 0.0026 0.0738 0.312 NK_CD56dim L2
ENSG00000162511 LAPTM5 -35513 sc-eQTL 4.71e-01 -0.0569 0.0787 0.312 NK_CD56dim L2
ENSG00000162517 PEF1 -922635 sc-eQTL 1.86e-01 -0.0927 0.0698 0.312 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 3757 sc-eQTL 3.42e-01 0.0938 0.0984 0.312 NK_CD56dim L2
ENSG00000287510 AL137857.1 -9432 sc-eQTL 4.63e-01 0.0598 0.0813 0.312 NK_CD56dim L2
ENSG00000060688 SNRNP40 -574527 sc-eQTL 8.69e-01 -0.017 0.103 0.315 NK_HLA L2
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 4.10e-01 0.0756 0.0916 0.315 NK_HLA L2
ENSG00000134644 PUM1 -343730 sc-eQTL 4.39e-02 0.18 0.0885 0.315 NK_HLA L2
ENSG00000162511 LAPTM5 -35513 sc-eQTL 3.31e-01 0.083 0.0852 0.315 NK_HLA L2
ENSG00000162517 PEF1 -922635 sc-eQTL 7.35e-01 -0.0325 0.0962 0.315 NK_HLA L2
ENSG00000186056 MATN1-AS1 3757 sc-eQTL 3.38e-01 0.0871 0.0906 0.315 NK_HLA L2
ENSG00000287510 AL137857.1 -9432 sc-eQTL 1.71e-01 -0.12 0.0874 0.315 NK_HLA L2
ENSG00000060688 SNRNP40 -574527 sc-eQTL 2.56e-01 -0.108 0.0952 0.312 NK_cytokine L2
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 9.41e-01 -0.0055 0.0745 0.312 NK_cytokine L2
ENSG00000134644 PUM1 -343730 sc-eQTL 5.00e-01 0.0543 0.0805 0.312 NK_cytokine L2
ENSG00000162511 LAPTM5 -35513 sc-eQTL 8.92e-01 -0.0121 0.0887 0.312 NK_cytokine L2
ENSG00000162517 PEF1 -922635 sc-eQTL 7.34e-01 0.0258 0.0755 0.312 NK_cytokine L2
ENSG00000186056 MATN1-AS1 3757 sc-eQTL 8.74e-01 0.0149 0.094 0.312 NK_cytokine L2
ENSG00000287510 AL137857.1 -9432 sc-eQTL 5.56e-01 -0.0515 0.0874 0.312 NK_cytokine L2
ENSG00000060688 SNRNP40 -574527 sc-eQTL 2.18e-01 -0.14 0.113 0.311 PB L2
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 9.30e-01 -0.0116 0.132 0.311 PB L2
ENSG00000134644 PUM1 -343730 sc-eQTL 4.28e-01 -0.0907 0.114 0.311 PB L2
ENSG00000162510 MATN1 -1324 sc-eQTL 6.15e-01 0.0537 0.106 0.311 PB L2
ENSG00000162511 LAPTM5 -35513 sc-eQTL 7.12e-01 0.0282 0.0761 0.311 PB L2
ENSG00000162517 PEF1 -922635 sc-eQTL 7.12e-01 -0.0434 0.117 0.311 PB L2
ENSG00000186056 MATN1-AS1 3757 sc-eQTL 2.13e-01 0.13 0.104 0.311 PB L2
ENSG00000287510 AL137857.1 -9432 sc-eQTL 3.32e-01 -0.108 0.11 0.311 PB L2
ENSG00000060688 SNRNP40 -574527 sc-eQTL 1.14e-01 -0.118 0.0747 0.307 Pro_T L2
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 2.63e-01 -0.107 0.0951 0.307 Pro_T L2
ENSG00000134644 PUM1 -343730 sc-eQTL 2.81e-02 -0.194 0.0879 0.307 Pro_T L2
ENSG00000162511 LAPTM5 -35513 sc-eQTL 4.72e-02 0.126 0.0632 0.307 Pro_T L2
ENSG00000162517 PEF1 -922635 sc-eQTL 3.58e-01 0.0861 0.0934 0.307 Pro_T L2
ENSG00000186056 MATN1-AS1 3757 sc-eQTL 9.11e-01 0.00995 0.0892 0.307 Pro_T L2
ENSG00000287510 AL137857.1 -9432 sc-eQTL 3.52e-01 -0.0764 0.0818 0.307 Pro_T L2
ENSG00000060688 SNRNP40 -574527 sc-eQTL 6.63e-01 -0.0428 0.0981 0.31 Treg L2
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 8.82e-01 -0.0141 0.0949 0.31 Treg L2
ENSG00000134644 PUM1 -343730 sc-eQTL 5.63e-01 0.0439 0.0759 0.31 Treg L2
ENSG00000162511 LAPTM5 -35513 sc-eQTL 9.87e-01 0.00142 0.087 0.31 Treg L2
ENSG00000162517 PEF1 -922635 sc-eQTL 7.22e-01 0.0335 0.0939 0.31 Treg L2
ENSG00000186056 MATN1-AS1 3757 sc-eQTL 6.29e-02 0.164 0.0879 0.31 Treg L2
ENSG00000287510 AL137857.1 -9432 sc-eQTL 1.98e-01 -0.114 0.0882 0.31 Treg L2
ENSG00000060688 SNRNP40 -574527 sc-eQTL 6.69e-02 -0.191 0.104 0.317 cDC L2
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 8.92e-01 0.0154 0.113 0.317 cDC L2
ENSG00000134644 PUM1 -343730 sc-eQTL 3.90e-02 0.2 0.0962 0.317 cDC L2
ENSG00000162511 LAPTM5 -35513 sc-eQTL 5.47e-01 -0.0411 0.0682 0.317 cDC L2
ENSG00000162517 PEF1 -922635 sc-eQTL 9.30e-01 0.00863 0.0988 0.317 cDC L2
ENSG00000168528 SERINC2 -687304 sc-eQTL 4.20e-01 -0.0707 0.0875 0.317 cDC L2
ENSG00000284543 LINC01226 -783965 sc-eQTL 4.08e-01 0.0713 0.0859 0.317 cDC L2
ENSG00000287510 AL137857.1 -9432 sc-eQTL 2.37e-02 -0.208 0.0914 0.317 cDC L2
ENSG00000060688 SNRNP40 -574527 sc-eQTL 2.65e-01 -0.0903 0.0809 0.31 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 3.27e-01 -0.0887 0.0903 0.31 cMono_IL1B L2
ENSG00000134644 PUM1 -343730 sc-eQTL 5.11e-01 0.0402 0.0612 0.31 cMono_IL1B L2
ENSG00000162511 LAPTM5 -35513 sc-eQTL 6.91e-01 -0.0214 0.0537 0.31 cMono_IL1B L2
ENSG00000162512 SDC3 -186497 sc-eQTL 1.36e-01 -0.151 0.101 0.31 cMono_IL1B L2
ENSG00000162517 PEF1 -922635 sc-eQTL 5.89e-01 0.0448 0.0827 0.31 cMono_IL1B L2
ENSG00000168528 SERINC2 -687304 sc-eQTL 2.89e-01 -0.109 0.102 0.31 cMono_IL1B L2
ENSG00000284543 LINC01226 -783965 sc-eQTL 1.63e-02 0.216 0.0894 0.31 cMono_IL1B L2
ENSG00000287510 AL137857.1 -9432 sc-eQTL 6.74e-01 0.0356 0.0845 0.31 cMono_IL1B L2
ENSG00000060688 SNRNP40 -574527 sc-eQTL 9.15e-01 0.00914 0.0851 0.31 cMono_S100A L2
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 4.06e-01 0.0836 0.1 0.31 cMono_S100A L2
ENSG00000134644 PUM1 -343730 sc-eQTL 2.51e-01 -0.0834 0.0725 0.31 cMono_S100A L2
ENSG00000162511 LAPTM5 -35513 sc-eQTL 8.90e-01 -0.0077 0.0559 0.31 cMono_S100A L2
ENSG00000162512 SDC3 -186497 sc-eQTL 4.64e-01 -0.0707 0.0964 0.31 cMono_S100A L2
ENSG00000162517 PEF1 -922635 sc-eQTL 2.76e-01 -0.0949 0.0869 0.31 cMono_S100A L2
ENSG00000168528 SERINC2 -687304 sc-eQTL 1.68e-01 -0.141 0.102 0.31 cMono_S100A L2
ENSG00000284543 LINC01226 -783965 sc-eQTL 6.87e-02 0.151 0.0823 0.31 cMono_S100A L2
ENSG00000287510 AL137857.1 -9432 sc-eQTL 7.31e-01 0.0287 0.0833 0.31 cMono_S100A L2
ENSG00000060688 SNRNP40 -574527 sc-eQTL 3.98e-01 0.112 0.132 0.3 gdT L2
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 5.12e-01 0.0748 0.114 0.3 gdT L2
ENSG00000134644 PUM1 -343730 sc-eQTL 6.41e-01 0.0548 0.117 0.3 gdT L2
ENSG00000162511 LAPTM5 -35513 sc-eQTL 7.77e-01 0.0361 0.128 0.3 gdT L2
ENSG00000162517 PEF1 -922635 sc-eQTL 3.17e-01 0.117 0.116 0.3 gdT L2
ENSG00000186056 MATN1-AS1 3757 sc-eQTL 7.15e-01 -0.043 0.118 0.3 gdT L2
ENSG00000287510 AL137857.1 -9432 sc-eQTL 5.77e-01 -0.0637 0.114 0.3 gdT L2
ENSG00000060688 SNRNP40 -574527 sc-eQTL 7.57e-01 -0.0292 0.0942 0.313 intMono L2
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 2.41e-01 -0.119 0.101 0.313 intMono L2
ENSG00000134644 PUM1 -343730 sc-eQTL 3.69e-01 -0.0773 0.0857 0.313 intMono L2
ENSG00000162511 LAPTM5 -35513 sc-eQTL 1.95e-01 0.0872 0.0671 0.313 intMono L2
ENSG00000162512 SDC3 -186497 sc-eQTL 6.49e-01 -0.0421 0.0923 0.313 intMono L2
ENSG00000162517 PEF1 -922635 sc-eQTL 1.03e-01 -0.158 0.0963 0.313 intMono L2
ENSG00000168528 SERINC2 -687304 sc-eQTL 4.52e-02 -0.193 0.0957 0.313 intMono L2
ENSG00000284543 LINC01226 -783965 sc-eQTL 4.36e-01 0.0713 0.0914 0.313 intMono L2
ENSG00000287510 AL137857.1 -9432 sc-eQTL 6.14e-01 0.0462 0.0915 0.313 intMono L2
ENSG00000060688 SNRNP40 -574527 sc-eQTL 2.58e-01 0.101 0.089 0.308 ncMono L2
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 4.30e-02 -0.192 0.0942 0.308 ncMono L2
ENSG00000134644 PUM1 -343730 sc-eQTL 2.57e-01 -0.0881 0.0775 0.308 ncMono L2
ENSG00000162511 LAPTM5 -35513 sc-eQTL 1.17e-01 0.111 0.0702 0.308 ncMono L2
ENSG00000162512 SDC3 -186497 sc-eQTL 2.96e-01 -0.0827 0.079 0.308 ncMono L2
ENSG00000162517 PEF1 -922635 sc-eQTL 6.34e-02 -0.168 0.09 0.308 ncMono L2
ENSG00000168528 SERINC2 -687304 sc-eQTL 3.91e-01 -0.0742 0.0863 0.308 ncMono L2
ENSG00000284543 LINC01226 -783965 sc-eQTL 6.71e-01 -0.0367 0.0863 0.308 ncMono L2
ENSG00000287510 AL137857.1 -9432 sc-eQTL 8.42e-01 0.0179 0.0895 0.308 ncMono L2
ENSG00000060688 SNRNP40 -574527 sc-eQTL 5.82e-01 -0.0562 0.102 0.305 pDC L2
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 6.53e-01 0.0504 0.112 0.305 pDC L2
ENSG00000134644 PUM1 -343730 sc-eQTL 6.81e-01 -0.0382 0.0928 0.305 pDC L2
ENSG00000162511 LAPTM5 -35513 sc-eQTL 1.45e-01 0.125 0.0857 0.305 pDC L2
ENSG00000162517 PEF1 -922635 sc-eQTL 4.65e-01 -0.0818 0.112 0.305 pDC L2
ENSG00000168528 SERINC2 -687304 sc-eQTL 9.54e-01 0.00605 0.105 0.305 pDC L2
ENSG00000284543 LINC01226 -783965 sc-eQTL 4.04e-01 0.0678 0.0811 0.305 pDC L2
ENSG00000287510 AL137857.1 -9432 sc-eQTL 8.62e-01 0.0167 0.0956 0.305 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -574527 sc-eQTL 7.84e-01 0.0271 0.0985 0.31 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 9.25e-01 -0.00771 0.082 0.31 B_Memory LOneK1K
ENSG00000134644 PUM1 -343730 sc-eQTL 3.64e-01 0.066 0.0726 0.31 B_Memory LOneK1K
ENSG00000162510 MATN1 -1324 sc-eQTL 1.25e-01 0.127 0.0824 0.31 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -35513 sc-eQTL 4.68e-01 0.0378 0.052 0.31 B_Memory LOneK1K
ENSG00000162517 PEF1 -922635 sc-eQTL 6.40e-01 0.0404 0.0862 0.31 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 3757 sc-eQTL 9.15e-01 0.00736 0.0689 0.31 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -9432 sc-eQTL 1.48e-01 -0.109 0.0747 0.31 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -574527 sc-eQTL 5.93e-02 -0.17 0.0895 0.31 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 1.25e-01 -0.109 0.071 0.31 B_Naive LOneK1K
ENSG00000134644 PUM1 -343730 sc-eQTL 6.47e-01 -0.0309 0.0675 0.31 B_Naive LOneK1K
ENSG00000162510 MATN1 -1324 sc-eQTL 6.76e-01 -0.0272 0.065 0.31 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -35513 sc-eQTL 3.63e-01 0.0416 0.0457 0.31 B_Naive LOneK1K
ENSG00000162517 PEF1 -922635 sc-eQTL 6.70e-01 -0.0356 0.0835 0.31 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 3757 sc-eQTL 1.99e-01 -0.0759 0.0589 0.31 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -9432 sc-eQTL 6.19e-01 -0.0349 0.0702 0.31 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -574527 sc-eQTL 1.62e-01 -0.107 0.0764 0.31 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 6.47e-01 -0.0399 0.0869 0.31 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -343730 sc-eQTL 7.82e-01 -0.0154 0.0555 0.31 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -35513 sc-eQTL 5.68e-01 -0.0278 0.0487 0.31 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -186497 sc-eQTL 1.26e-01 -0.152 0.0989 0.31 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -922635 sc-eQTL 9.58e-01 -0.00373 0.0699 0.31 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -687304 sc-eQTL 1.60e-01 -0.144 0.102 0.31 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -783965 sc-eQTL 8.12e-03 0.22 0.0825 0.31 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -9432 sc-eQTL 4.98e-01 0.0533 0.0784 0.31 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -574527 sc-eQTL 2.10e-01 0.105 0.0833 0.312 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 7.89e-02 -0.16 0.0908 0.312 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -343730 sc-eQTL 6.37e-01 -0.0354 0.0749 0.312 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -35513 sc-eQTL 8.29e-02 0.104 0.0595 0.312 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -186497 sc-eQTL 6.39e-01 -0.0411 0.0875 0.312 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -922635 sc-eQTL 2.04e-02 -0.184 0.0786 0.312 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -687304 sc-eQTL 1.87e-01 -0.12 0.0905 0.312 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -783965 sc-eQTL 7.21e-01 0.0308 0.0862 0.312 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -9432 sc-eQTL 3.63e-01 0.0785 0.0862 0.312 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -574527 sc-eQTL 4.66e-01 -0.0676 0.0925 0.312 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -574721 sc-eQTL 4.50e-01 -0.0478 0.0632 0.312 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -343730 sc-eQTL 5.48e-01 0.0417 0.0693 0.312 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -35513 sc-eQTL 6.93e-01 -0.0306 0.0774 0.312 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -922635 sc-eQTL 5.34e-01 -0.0367 0.0588 0.312 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 3757 sc-eQTL 4.00e-01 0.0752 0.0892 0.312 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -9432 sc-eQTL 5.73e-01 -0.0435 0.0771 0.312 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162510 MATN1 -1324 eQTL 0.000183 0.0769 0.0205 0.017 0.0151 0.319
ENSG00000162511 LAPTM5 -35513 eQTL 0.0379 -0.0218 0.0105 0.0 0.0 0.319
ENSG00000186056 MATN1-AS1 3757 eQTL 5.25e-05 -0.0533 0.0131 0.0 0.0 0.319

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162510 MATN1 -1324 0.000153 0.000114 1.79e-05 3.17e-05 1.72e-05 3.91e-05 0.000129 1.25e-05 8.84e-05 4.71e-05 0.000121 4.48e-05 0.000157 4.58e-05 2.33e-05 6.51e-05 5.04e-05 8.55e-05 2.64e-05 1.78e-05 5.01e-05 0.000113 0.000103 2.62e-05 0.000131 3.1e-05 4.84e-05 3.51e-05 0.00011 6.29e-05 5.67e-05 3.87e-06 6.08e-06 1.87e-05 2.3e-05 1.23e-05 6.52e-06 6.74e-06 1.12e-05 5.5e-06 2.53e-06 0.000125 1.41e-05 6.9e-07 7.52e-06 1.22e-05 1.26e-05 4.21e-06 3.91e-06