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Genes within 1Mb (chr1:30713540:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -583248 sc-eQTL 1.30e-01 -0.128 0.0841 0.306 B L1
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 3.46e-01 -0.0639 0.0676 0.306 B L1
ENSG00000134644 PUM1 -352451 sc-eQTL 8.26e-01 -0.0125 0.0568 0.306 B L1
ENSG00000162510 MATN1 -10045 sc-eQTL 9.93e-01 0.000488 0.0598 0.306 B L1
ENSG00000162511 LAPTM5 -44234 sc-eQTL 4.26e-01 0.0373 0.0467 0.306 B L1
ENSG00000162517 PEF1 -931356 sc-eQTL 9.89e-01 0.000952 0.0706 0.306 B L1
ENSG00000186056 MATN1-AS1 -4964 sc-eQTL 1.31e-01 -0.0827 0.0545 0.306 B L1
ENSG00000287510 AL137857.1 -18153 sc-eQTL 8.63e-02 -0.111 0.0645 0.306 B L1
ENSG00000060688 SNRNP40 -583248 sc-eQTL 1.63e-01 0.101 0.072 0.306 CD4T L1
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 5.70e-01 -0.0322 0.0565 0.306 CD4T L1
ENSG00000134644 PUM1 -352451 sc-eQTL 7.94e-01 -0.0132 0.0503 0.306 CD4T L1
ENSG00000162511 LAPTM5 -44234 sc-eQTL 6.32e-01 0.0267 0.0557 0.306 CD4T L1
ENSG00000162517 PEF1 -931356 sc-eQTL 5.74e-01 -0.0328 0.0583 0.306 CD4T L1
ENSG00000186056 MATN1-AS1 -4964 sc-eQTL 4.05e-01 -0.0416 0.0498 0.306 CD4T L1
ENSG00000287510 AL137857.1 -18153 sc-eQTL 3.73e-01 -0.0533 0.0596 0.306 CD4T L1
ENSG00000060688 SNRNP40 -583248 sc-eQTL 8.03e-01 -0.0241 0.0966 0.306 CD8T L1
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 6.68e-01 0.0276 0.0643 0.306 CD8T L1
ENSG00000134644 PUM1 -352451 sc-eQTL 8.00e-01 -0.0144 0.0566 0.306 CD8T L1
ENSG00000162511 LAPTM5 -44234 sc-eQTL 1.77e-01 0.0741 0.0547 0.306 CD8T L1
ENSG00000162517 PEF1 -931356 sc-eQTL 2.42e-01 -0.0793 0.0675 0.306 CD8T L1
ENSG00000186056 MATN1-AS1 -4964 sc-eQTL 7.87e-01 -0.0174 0.0644 0.306 CD8T L1
ENSG00000287510 AL137857.1 -18153 sc-eQTL 9.09e-01 -0.00925 0.081 0.306 CD8T L1
ENSG00000060688 SNRNP40 -583248 sc-eQTL 9.76e-02 -0.144 0.0866 0.311 DC L1
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 9.24e-01 -0.00992 0.103 0.311 DC L1
ENSG00000134644 PUM1 -352451 sc-eQTL 9.04e-02 0.137 0.0803 0.311 DC L1
ENSG00000162511 LAPTM5 -44234 sc-eQTL 7.19e-01 0.0208 0.0577 0.311 DC L1
ENSG00000162517 PEF1 -931356 sc-eQTL 9.66e-01 -0.00403 0.0936 0.311 DC L1
ENSG00000168528 SERINC2 -696025 sc-eQTL 7.36e-01 -0.0322 0.0952 0.311 DC L1
ENSG00000284543 LINC01226 -792686 sc-eQTL 1.36e-01 0.094 0.0627 0.311 DC L1
ENSG00000287510 AL137857.1 -18153 sc-eQTL 1.67e-01 -0.126 0.0909 0.311 DC L1
ENSG00000060688 SNRNP40 -583248 sc-eQTL 5.61e-01 -0.0388 0.0666 0.306 Mono L1
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 3.12e-01 -0.0835 0.0825 0.306 Mono L1
ENSG00000134644 PUM1 -352451 sc-eQTL 8.94e-01 -0.00706 0.053 0.306 Mono L1
ENSG00000162511 LAPTM5 -44234 sc-eQTL 8.13e-01 0.0116 0.0487 0.306 Mono L1
ENSG00000162512 SDC3 -195218 sc-eQTL 2.26e-01 -0.113 0.0934 0.306 Mono L1
ENSG00000162517 PEF1 -931356 sc-eQTL 3.39e-01 -0.0629 0.0656 0.306 Mono L1
ENSG00000168528 SERINC2 -696025 sc-eQTL 2.07e-01 -0.127 0.1 0.306 Mono L1
ENSG00000284543 LINC01226 -792686 sc-eQTL 1.98e-02 0.205 0.0874 0.306 Mono L1
ENSG00000287510 AL137857.1 -18153 sc-eQTL 3.15e-01 0.0777 0.0772 0.306 Mono L1
ENSG00000060688 SNRNP40 -583248 sc-eQTL 9.05e-01 -0.011 0.0919 0.307 NK L1
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 2.22e-01 -0.0767 0.0627 0.307 NK L1
ENSG00000134644 PUM1 -352451 sc-eQTL 6.99e-01 0.0255 0.0659 0.307 NK L1
ENSG00000162511 LAPTM5 -44234 sc-eQTL 2.86e-01 -0.081 0.0757 0.307 NK L1
ENSG00000162517 PEF1 -931356 sc-eQTL 4.94e-01 -0.0379 0.0553 0.307 NK L1
ENSG00000186056 MATN1-AS1 -4964 sc-eQTL 5.18e-01 0.0552 0.0852 0.307 NK L1
ENSG00000287510 AL137857.1 -18153 sc-eQTL 8.35e-01 -0.0164 0.0788 0.307 NK L1
ENSG00000060688 SNRNP40 -583248 sc-eQTL 4.15e-01 -0.0566 0.0693 0.306 Other_T L1
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 9.35e-01 0.00605 0.0742 0.306 Other_T L1
ENSG00000134644 PUM1 -352451 sc-eQTL 3.37e-01 -0.064 0.0665 0.306 Other_T L1
ENSG00000162511 LAPTM5 -44234 sc-eQTL 4.98e-02 0.107 0.0542 0.306 Other_T L1
ENSG00000162517 PEF1 -931356 sc-eQTL 3.04e-02 0.157 0.0722 0.306 Other_T L1
ENSG00000186056 MATN1-AS1 -4964 sc-eQTL 7.69e-01 0.0263 0.0895 0.306 Other_T L1
ENSG00000287510 AL137857.1 -18153 sc-eQTL 2.23e-01 -0.114 0.0929 0.306 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -583248 sc-eQTL 2.95e-01 0.113 0.108 0.319 B_Activated L2
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 2.69e-01 0.12 0.108 0.319 B_Activated L2
ENSG00000134644 PUM1 -352451 sc-eQTL 8.12e-01 -0.0241 0.101 0.319 B_Activated L2
ENSG00000162510 MATN1 -10045 sc-eQTL 1.08e-01 -0.142 0.0877 0.319 B_Activated L2
ENSG00000162511 LAPTM5 -44234 sc-eQTL 6.15e-01 -0.031 0.0616 0.319 B_Activated L2
ENSG00000162517 PEF1 -931356 sc-eQTL 8.37e-01 0.0216 0.105 0.319 B_Activated L2
ENSG00000186056 MATN1-AS1 -4964 sc-eQTL 9.89e-01 -0.00143 0.0995 0.319 B_Activated L2
ENSG00000287510 AL137857.1 -18153 sc-eQTL 2.13e-02 -0.201 0.0867 0.319 B_Activated L2
ENSG00000060688 SNRNP40 -583248 sc-eQTL 7.19e-01 0.0374 0.104 0.307 B_Intermediate L2
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 6.63e-01 -0.0377 0.0863 0.307 B_Intermediate L2
ENSG00000134644 PUM1 -352451 sc-eQTL 8.36e-01 -0.0169 0.0815 0.307 B_Intermediate L2
ENSG00000162510 MATN1 -10045 sc-eQTL 3.04e-02 0.183 0.0839 0.307 B_Intermediate L2
ENSG00000162511 LAPTM5 -44234 sc-eQTL 9.24e-01 -0.005 0.0521 0.307 B_Intermediate L2
ENSG00000162517 PEF1 -931356 sc-eQTL 9.93e-01 0.000894 0.0967 0.307 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -4964 sc-eQTL 9.66e-01 -0.00312 0.0731 0.307 B_Intermediate L2
ENSG00000287510 AL137857.1 -18153 sc-eQTL 1.21e-01 -0.126 0.0813 0.307 B_Intermediate L2
ENSG00000060688 SNRNP40 -583248 sc-eQTL 5.36e-01 -0.0626 0.101 0.306 B_Memory L2
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 4.36e-01 0.0724 0.0928 0.306 B_Memory L2
ENSG00000134644 PUM1 -352451 sc-eQTL 2.52e-01 0.0926 0.0807 0.306 B_Memory L2
ENSG00000162510 MATN1 -10045 sc-eQTL 7.66e-02 0.137 0.0768 0.306 B_Memory L2
ENSG00000162511 LAPTM5 -44234 sc-eQTL 5.63e-01 0.0397 0.0686 0.306 B_Memory L2
ENSG00000162517 PEF1 -931356 sc-eQTL 9.30e-01 0.00804 0.0916 0.306 B_Memory L2
ENSG00000186056 MATN1-AS1 -4964 sc-eQTL 7.53e-01 0.0247 0.0785 0.306 B_Memory L2
ENSG00000287510 AL137857.1 -18153 sc-eQTL 3.38e-01 0.0881 0.0918 0.306 B_Memory L2
ENSG00000060688 SNRNP40 -583248 sc-eQTL 3.78e-01 -0.0817 0.0925 0.306 B_Naive1 L2
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 8.51e-01 0.0151 0.08 0.306 B_Naive1 L2
ENSG00000134644 PUM1 -352451 sc-eQTL 2.56e-01 -0.0802 0.0704 0.306 B_Naive1 L2
ENSG00000162510 MATN1 -10045 sc-eQTL 9.73e-01 0.00242 0.0716 0.306 B_Naive1 L2
ENSG00000162511 LAPTM5 -44234 sc-eQTL 4.68e-01 0.0347 0.0478 0.306 B_Naive1 L2
ENSG00000162517 PEF1 -931356 sc-eQTL 9.52e-01 0.00505 0.0844 0.306 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -4964 sc-eQTL 3.15e-01 -0.0631 0.0627 0.306 B_Naive1 L2
ENSG00000287510 AL137857.1 -18153 sc-eQTL 6.65e-01 -0.0336 0.0776 0.306 B_Naive1 L2
ENSG00000060688 SNRNP40 -583248 sc-eQTL 5.25e-02 -0.19 0.0977 0.305 B_Naive2 L2
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 7.07e-04 -0.272 0.0791 0.305 B_Naive2 L2
ENSG00000134644 PUM1 -352451 sc-eQTL 6.46e-01 0.0366 0.0796 0.305 B_Naive2 L2
ENSG00000162510 MATN1 -10045 sc-eQTL 7.86e-01 -0.0208 0.0764 0.305 B_Naive2 L2
ENSG00000162511 LAPTM5 -44234 sc-eQTL 6.15e-01 0.0261 0.0519 0.305 B_Naive2 L2
ENSG00000162517 PEF1 -931356 sc-eQTL 3.31e-01 -0.0918 0.0942 0.305 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -4964 sc-eQTL 2.67e-01 -0.0839 0.0753 0.305 B_Naive2 L2
ENSG00000287510 AL137857.1 -18153 sc-eQTL 1.39e-01 -0.121 0.0812 0.305 B_Naive2 L2
ENSG00000060688 SNRNP40 -583248 sc-eQTL 9.15e-01 0.0105 0.0989 0.305 CD4_CTL L2
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 3.17e-01 0.0973 0.097 0.305 CD4_CTL L2
ENSG00000134644 PUM1 -352451 sc-eQTL 8.32e-01 0.0202 0.0954 0.305 CD4_CTL L2
ENSG00000162511 LAPTM5 -44234 sc-eQTL 7.91e-01 0.0226 0.085 0.305 CD4_CTL L2
ENSG00000162517 PEF1 -931356 sc-eQTL 6.91e-01 0.0347 0.0871 0.305 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -4964 sc-eQTL 4.49e-01 0.0705 0.0929 0.305 CD4_CTL L2
ENSG00000287510 AL137857.1 -18153 sc-eQTL 3.19e-01 0.0817 0.0819 0.305 CD4_CTL L2
ENSG00000060688 SNRNP40 -583248 sc-eQTL 9.34e-01 -0.00629 0.0763 0.306 CD4_Naive L2
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 2.22e-01 -0.0827 0.0674 0.306 CD4_Naive L2
ENSG00000134644 PUM1 -352451 sc-eQTL 9.09e-01 -0.00616 0.054 0.306 CD4_Naive L2
ENSG00000162511 LAPTM5 -44234 sc-eQTL 9.36e-01 -0.00468 0.0579 0.306 CD4_Naive L2
ENSG00000162517 PEF1 -931356 sc-eQTL 3.27e-01 -0.0623 0.0633 0.306 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -4964 sc-eQTL 5.77e-02 -0.111 0.0582 0.306 CD4_Naive L2
ENSG00000287510 AL137857.1 -18153 sc-eQTL 9.72e-01 0.00236 0.0675 0.306 CD4_Naive L2
ENSG00000060688 SNRNP40 -583248 sc-eQTL 5.90e-02 0.18 0.0948 0.306 CD4_TCM L2
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 6.32e-01 0.0369 0.077 0.306 CD4_TCM L2
ENSG00000134644 PUM1 -352451 sc-eQTL 8.41e-01 -0.0137 0.0682 0.306 CD4_TCM L2
ENSG00000162511 LAPTM5 -44234 sc-eQTL 2.16e-01 0.07 0.0564 0.306 CD4_TCM L2
ENSG00000162517 PEF1 -931356 sc-eQTL 7.81e-01 -0.0211 0.0758 0.306 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -4964 sc-eQTL 8.55e-01 0.0131 0.0718 0.306 CD4_TCM L2
ENSG00000287510 AL137857.1 -18153 sc-eQTL 2.50e-01 -0.092 0.0797 0.306 CD4_TCM L2
ENSG00000060688 SNRNP40 -583248 sc-eQTL 3.18e-01 0.0941 0.094 0.306 CD4_TEM L2
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 2.10e-01 0.112 0.0895 0.306 CD4_TEM L2
ENSG00000134644 PUM1 -352451 sc-eQTL 4.41e-01 -0.0576 0.0747 0.306 CD4_TEM L2
ENSG00000162511 LAPTM5 -44234 sc-eQTL 6.46e-01 -0.0348 0.0756 0.306 CD4_TEM L2
ENSG00000162517 PEF1 -931356 sc-eQTL 9.94e-01 0.000629 0.0847 0.306 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -4964 sc-eQTL 6.81e-01 -0.0364 0.0885 0.306 CD4_TEM L2
ENSG00000287510 AL137857.1 -18153 sc-eQTL 1.56e-01 0.124 0.0868 0.306 CD4_TEM L2
ENSG00000060688 SNRNP40 -583248 sc-eQTL 9.39e-01 0.00816 0.106 0.306 CD8_CTL L2
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 2.03e-01 -0.103 0.0808 0.306 CD8_CTL L2
ENSG00000134644 PUM1 -352451 sc-eQTL 1.50e-01 0.113 0.0784 0.306 CD8_CTL L2
ENSG00000162511 LAPTM5 -44234 sc-eQTL 8.46e-01 0.017 0.0872 0.306 CD8_CTL L2
ENSG00000162517 PEF1 -931356 sc-eQTL 9.22e-01 -0.00749 0.0759 0.306 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -4964 sc-eQTL 2.53e-01 -0.105 0.0914 0.306 CD8_CTL L2
ENSG00000287510 AL137857.1 -18153 sc-eQTL 7.30e-01 -0.0298 0.0862 0.306 CD8_CTL L2
ENSG00000060688 SNRNP40 -583248 sc-eQTL 7.22e-01 0.0337 0.0944 0.306 CD8_Naive L2
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 2.05e-01 0.103 0.0812 0.306 CD8_Naive L2
ENSG00000134644 PUM1 -352451 sc-eQTL 8.95e-02 -0.111 0.0651 0.306 CD8_Naive L2
ENSG00000162511 LAPTM5 -44234 sc-eQTL 1.79e-01 0.0843 0.0626 0.306 CD8_Naive L2
ENSG00000162517 PEF1 -931356 sc-eQTL 6.65e-01 -0.0379 0.0873 0.306 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -4964 sc-eQTL 9.33e-01 0.00656 0.0784 0.306 CD8_Naive L2
ENSG00000287510 AL137857.1 -18153 sc-eQTL 1.98e-01 0.11 0.085 0.306 CD8_Naive L2
ENSG00000060688 SNRNP40 -583248 sc-eQTL 3.49e-01 0.0993 0.106 0.299 CD8_TCM L2
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 8.95e-01 0.0129 0.0973 0.299 CD8_TCM L2
ENSG00000134644 PUM1 -352451 sc-eQTL 6.70e-01 -0.039 0.0914 0.299 CD8_TCM L2
ENSG00000162511 LAPTM5 -44234 sc-eQTL 5.79e-01 -0.0531 0.0956 0.299 CD8_TCM L2
ENSG00000162517 PEF1 -931356 sc-eQTL 1.34e-01 -0.146 0.0972 0.299 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -4964 sc-eQTL 4.88e-01 0.0614 0.0885 0.299 CD8_TCM L2
ENSG00000287510 AL137857.1 -18153 sc-eQTL 7.29e-02 0.16 0.0888 0.299 CD8_TCM L2
ENSG00000060688 SNRNP40 -583248 sc-eQTL 2.11e-01 -0.126 0.101 0.304 CD8_TEM L2
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 8.66e-01 0.0164 0.0969 0.304 CD8_TEM L2
ENSG00000134644 PUM1 -352451 sc-eQTL 8.22e-01 -0.0224 0.0991 0.304 CD8_TEM L2
ENSG00000162511 LAPTM5 -44234 sc-eQTL 7.04e-01 -0.0354 0.0932 0.304 CD8_TEM L2
ENSG00000162517 PEF1 -931356 sc-eQTL 1.37e-01 -0.13 0.0872 0.304 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -4964 sc-eQTL 3.49e-02 -0.203 0.0956 0.304 CD8_TEM L2
ENSG00000287510 AL137857.1 -18153 sc-eQTL 1.50e-01 -0.126 0.0871 0.304 CD8_TEM L2
ENSG00000060688 SNRNP40 -583248 sc-eQTL 6.38e-01 -0.0479 0.102 0.303 MAIT L2
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 2.12e-01 0.112 0.0898 0.303 MAIT L2
ENSG00000134644 PUM1 -352451 sc-eQTL 5.38e-01 -0.0533 0.0863 0.303 MAIT L2
ENSG00000162511 LAPTM5 -44234 sc-eQTL 6.67e-01 0.0351 0.0815 0.303 MAIT L2
ENSG00000162517 PEF1 -931356 sc-eQTL 4.14e-01 0.0732 0.0894 0.303 MAIT L2
ENSG00000186056 MATN1-AS1 -4964 sc-eQTL 5.66e-01 0.0521 0.0907 0.303 MAIT L2
ENSG00000287510 AL137857.1 -18153 sc-eQTL 1.60e-01 -0.131 0.0931 0.303 MAIT L2
ENSG00000060688 SNRNP40 -583248 sc-eQTL 2.87e-01 0.109 0.102 0.304 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 1.13e-01 -0.137 0.0862 0.304 NK_CD56bright L2
ENSG00000134644 PUM1 -352451 sc-eQTL 9.42e-01 0.0066 0.0911 0.304 NK_CD56bright L2
ENSG00000162511 LAPTM5 -44234 sc-eQTL 8.89e-01 -0.0125 0.0898 0.304 NK_CD56bright L2
ENSG00000162517 PEF1 -931356 sc-eQTL 9.24e-01 0.00832 0.0873 0.304 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -4964 sc-eQTL 2.30e-02 -0.204 0.0891 0.304 NK_CD56bright L2
ENSG00000287510 AL137857.1 -18153 sc-eQTL 5.42e-01 -0.0543 0.0889 0.304 NK_CD56bright L2
ENSG00000060688 SNRNP40 -583248 sc-eQTL 7.92e-01 -0.0257 0.0972 0.308 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 1.78e-01 -0.0968 0.0715 0.308 NK_CD56dim L2
ENSG00000134644 PUM1 -352451 sc-eQTL 9.27e-01 -0.0068 0.0737 0.308 NK_CD56dim L2
ENSG00000162511 LAPTM5 -44234 sc-eQTL 2.96e-01 -0.0822 0.0784 0.308 NK_CD56dim L2
ENSG00000162517 PEF1 -931356 sc-eQTL 2.29e-01 -0.0841 0.0697 0.308 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -4964 sc-eQTL 2.68e-01 0.109 0.0982 0.308 NK_CD56dim L2
ENSG00000287510 AL137857.1 -18153 sc-eQTL 5.94e-01 0.0433 0.0812 0.308 NK_CD56dim L2
ENSG00000060688 SNRNP40 -583248 sc-eQTL 1.00e+00 -1.89e-05 0.103 0.311 NK_HLA L2
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 2.97e-01 0.0957 0.0915 0.311 NK_HLA L2
ENSG00000134644 PUM1 -352451 sc-eQTL 5.36e-02 0.172 0.0885 0.311 NK_HLA L2
ENSG00000162511 LAPTM5 -44234 sc-eQTL 5.41e-01 0.0522 0.0852 0.311 NK_HLA L2
ENSG00000162517 PEF1 -931356 sc-eQTL 7.80e-01 -0.0269 0.0961 0.311 NK_HLA L2
ENSG00000186056 MATN1-AS1 -4964 sc-eQTL 2.86e-01 0.0968 0.0905 0.311 NK_HLA L2
ENSG00000287510 AL137857.1 -18153 sc-eQTL 1.49e-01 -0.127 0.0873 0.311 NK_HLA L2
ENSG00000060688 SNRNP40 -583248 sc-eQTL 3.05e-01 -0.0979 0.0952 0.308 NK_cytokine L2
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 9.91e-01 0.000815 0.0745 0.308 NK_cytokine L2
ENSG00000134644 PUM1 -352451 sc-eQTL 6.14e-01 0.0407 0.0805 0.308 NK_cytokine L2
ENSG00000162511 LAPTM5 -44234 sc-eQTL 5.48e-01 -0.0533 0.0886 0.308 NK_cytokine L2
ENSG00000162517 PEF1 -931356 sc-eQTL 6.12e-01 0.0383 0.0756 0.308 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -4964 sc-eQTL 7.75e-01 0.0269 0.094 0.308 NK_cytokine L2
ENSG00000287510 AL137857.1 -18153 sc-eQTL 4.65e-01 -0.064 0.0874 0.308 NK_cytokine L2
ENSG00000060688 SNRNP40 -583248 sc-eQTL 2.18e-01 -0.14 0.113 0.311 PB L2
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 9.30e-01 -0.0116 0.132 0.311 PB L2
ENSG00000134644 PUM1 -352451 sc-eQTL 4.28e-01 -0.0907 0.114 0.311 PB L2
ENSG00000162510 MATN1 -10045 sc-eQTL 6.15e-01 0.0537 0.106 0.311 PB L2
ENSG00000162511 LAPTM5 -44234 sc-eQTL 7.12e-01 0.0282 0.0761 0.311 PB L2
ENSG00000162517 PEF1 -931356 sc-eQTL 7.12e-01 -0.0434 0.117 0.311 PB L2
ENSG00000186056 MATN1-AS1 -4964 sc-eQTL 2.13e-01 0.13 0.104 0.311 PB L2
ENSG00000287510 AL137857.1 -18153 sc-eQTL 3.32e-01 -0.108 0.11 0.311 PB L2
ENSG00000060688 SNRNP40 -583248 sc-eQTL 1.16e-01 -0.118 0.0745 0.302 Pro_T L2
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 3.12e-01 -0.0962 0.0949 0.302 Pro_T L2
ENSG00000134644 PUM1 -352451 sc-eQTL 4.61e-02 -0.176 0.0879 0.302 Pro_T L2
ENSG00000162511 LAPTM5 -44234 sc-eQTL 8.33e-02 0.11 0.0632 0.302 Pro_T L2
ENSG00000162517 PEF1 -931356 sc-eQTL 3.79e-01 0.0822 0.0933 0.302 Pro_T L2
ENSG00000186056 MATN1-AS1 -4964 sc-eQTL 8.66e-01 0.0151 0.089 0.302 Pro_T L2
ENSG00000287510 AL137857.1 -18153 sc-eQTL 2.87e-01 -0.0872 0.0816 0.302 Pro_T L2
ENSG00000060688 SNRNP40 -583248 sc-eQTL 7.14e-01 -0.0359 0.0979 0.306 Treg L2
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 9.81e-01 -0.00225 0.0947 0.306 Treg L2
ENSG00000134644 PUM1 -352451 sc-eQTL 5.39e-01 0.0466 0.0757 0.306 Treg L2
ENSG00000162511 LAPTM5 -44234 sc-eQTL 9.78e-01 -0.00236 0.0868 0.306 Treg L2
ENSG00000162517 PEF1 -931356 sc-eQTL 7.95e-01 0.0244 0.0938 0.306 Treg L2
ENSG00000186056 MATN1-AS1 -4964 sc-eQTL 4.73e-02 0.175 0.0876 0.306 Treg L2
ENSG00000287510 AL137857.1 -18153 sc-eQTL 1.23e-01 -0.136 0.0878 0.306 Treg L2
ENSG00000060688 SNRNP40 -583248 sc-eQTL 7.24e-02 -0.187 0.103 0.312 cDC L2
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 9.43e-01 0.00802 0.113 0.312 cDC L2
ENSG00000134644 PUM1 -352451 sc-eQTL 4.43e-02 0.194 0.096 0.312 cDC L2
ENSG00000162511 LAPTM5 -44234 sc-eQTL 4.01e-01 -0.0571 0.0679 0.312 cDC L2
ENSG00000162517 PEF1 -931356 sc-eQTL 9.46e-01 0.00671 0.0985 0.312 cDC L2
ENSG00000168528 SERINC2 -696025 sc-eQTL 5.19e-01 -0.0563 0.0873 0.312 cDC L2
ENSG00000284543 LINC01226 -792686 sc-eQTL 3.29e-01 0.0838 0.0856 0.312 cDC L2
ENSG00000287510 AL137857.1 -18153 sc-eQTL 3.69e-02 -0.192 0.0913 0.312 cDC L2
ENSG00000060688 SNRNP40 -583248 sc-eQTL 3.55e-01 -0.0748 0.0806 0.306 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 3.39e-01 -0.0863 0.0899 0.306 cMono_IL1B L2
ENSG00000134644 PUM1 -352451 sc-eQTL 4.82e-01 0.0429 0.0609 0.306 cMono_IL1B L2
ENSG00000162511 LAPTM5 -44234 sc-eQTL 5.70e-01 -0.0304 0.0535 0.306 cMono_IL1B L2
ENSG00000162512 SDC3 -195218 sc-eQTL 1.33e-01 -0.151 0.1 0.306 cMono_IL1B L2
ENSG00000162517 PEF1 -931356 sc-eQTL 5.01e-01 0.0555 0.0823 0.306 cMono_IL1B L2
ENSG00000168528 SERINC2 -696025 sc-eQTL 3.42e-01 -0.0971 0.102 0.306 cMono_IL1B L2
ENSG00000284543 LINC01226 -792686 sc-eQTL 2.34e-02 0.204 0.0891 0.306 cMono_IL1B L2
ENSG00000287510 AL137857.1 -18153 sc-eQTL 6.28e-01 0.0408 0.0841 0.306 cMono_IL1B L2
ENSG00000060688 SNRNP40 -583248 sc-eQTL 8.62e-01 0.0148 0.0849 0.306 cMono_S100A L2
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 3.80e-01 0.088 0.1 0.306 cMono_S100A L2
ENSG00000134644 PUM1 -352451 sc-eQTL 2.57e-01 -0.0821 0.0723 0.306 cMono_S100A L2
ENSG00000162511 LAPTM5 -44234 sc-eQTL 8.62e-01 -0.00971 0.0557 0.306 cMono_S100A L2
ENSG00000162512 SDC3 -195218 sc-eQTL 4.53e-01 -0.0723 0.0961 0.306 cMono_S100A L2
ENSG00000162517 PEF1 -931356 sc-eQTL 3.00e-01 -0.0901 0.0867 0.306 cMono_S100A L2
ENSG00000168528 SERINC2 -696025 sc-eQTL 2.02e-01 -0.13 0.102 0.306 cMono_S100A L2
ENSG00000284543 LINC01226 -792686 sc-eQTL 6.82e-02 0.151 0.0821 0.306 cMono_S100A L2
ENSG00000287510 AL137857.1 -18153 sc-eQTL 6.40e-01 0.0389 0.0831 0.306 cMono_S100A L2
ENSG00000060688 SNRNP40 -583248 sc-eQTL 4.56e-01 0.0988 0.132 0.294 gdT L2
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 4.21e-01 0.0916 0.113 0.294 gdT L2
ENSG00000134644 PUM1 -352451 sc-eQTL 5.41e-01 0.0717 0.117 0.294 gdT L2
ENSG00000162511 LAPTM5 -44234 sc-eQTL 8.09e-01 0.0308 0.127 0.294 gdT L2
ENSG00000162517 PEF1 -931356 sc-eQTL 3.99e-01 0.0983 0.116 0.294 gdT L2
ENSG00000186056 MATN1-AS1 -4964 sc-eQTL 6.32e-01 -0.0565 0.117 0.294 gdT L2
ENSG00000287510 AL137857.1 -18153 sc-eQTL 6.06e-01 -0.0589 0.114 0.294 gdT L2
ENSG00000060688 SNRNP40 -583248 sc-eQTL 7.20e-01 -0.0338 0.0941 0.309 intMono L2
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 1.84e-01 -0.134 0.101 0.309 intMono L2
ENSG00000134644 PUM1 -352451 sc-eQTL 3.22e-01 -0.0851 0.0856 0.309 intMono L2
ENSG00000162511 LAPTM5 -44234 sc-eQTL 2.09e-01 0.0845 0.0671 0.309 intMono L2
ENSG00000162512 SDC3 -195218 sc-eQTL 5.93e-01 -0.0493 0.0922 0.309 intMono L2
ENSG00000162517 PEF1 -931356 sc-eQTL 1.12e-01 -0.154 0.0963 0.309 intMono L2
ENSG00000168528 SERINC2 -696025 sc-eQTL 5.04e-02 -0.188 0.0956 0.309 intMono L2
ENSG00000284543 LINC01226 -792686 sc-eQTL 4.62e-01 0.0674 0.0914 0.309 intMono L2
ENSG00000287510 AL137857.1 -18153 sc-eQTL 8.00e-01 0.0233 0.0915 0.309 intMono L2
ENSG00000060688 SNRNP40 -583248 sc-eQTL 2.38e-01 0.105 0.0889 0.303 ncMono L2
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 4.11e-02 -0.193 0.0941 0.303 ncMono L2
ENSG00000134644 PUM1 -352451 sc-eQTL 2.70e-01 -0.0857 0.0775 0.303 ncMono L2
ENSG00000162511 LAPTM5 -44234 sc-eQTL 1.45e-01 0.103 0.0702 0.303 ncMono L2
ENSG00000162512 SDC3 -195218 sc-eQTL 2.25e-01 -0.0959 0.0788 0.303 ncMono L2
ENSG00000162517 PEF1 -931356 sc-eQTL 7.94e-02 -0.159 0.09 0.303 ncMono L2
ENSG00000168528 SERINC2 -696025 sc-eQTL 4.56e-01 -0.0644 0.0862 0.303 ncMono L2
ENSG00000284543 LINC01226 -792686 sc-eQTL 5.75e-01 -0.0485 0.0862 0.303 ncMono L2
ENSG00000287510 AL137857.1 -18153 sc-eQTL 8.73e-01 0.0143 0.0894 0.303 ncMono L2
ENSG00000060688 SNRNP40 -583248 sc-eQTL 7.20e-01 -0.0365 0.102 0.299 pDC L2
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 6.29e-01 0.0541 0.112 0.299 pDC L2
ENSG00000134644 PUM1 -352451 sc-eQTL 7.13e-01 -0.0341 0.0926 0.299 pDC L2
ENSG00000162511 LAPTM5 -44234 sc-eQTL 2.89e-01 0.0913 0.0858 0.299 pDC L2
ENSG00000162517 PEF1 -931356 sc-eQTL 3.51e-01 -0.104 0.111 0.299 pDC L2
ENSG00000168528 SERINC2 -696025 sc-eQTL 8.70e-01 0.0171 0.104 0.299 pDC L2
ENSG00000284543 LINC01226 -792686 sc-eQTL 3.22e-01 0.0802 0.0808 0.299 pDC L2
ENSG00000287510 AL137857.1 -18153 sc-eQTL 9.98e-01 0.000204 0.0954 0.299 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -583248 sc-eQTL 7.15e-01 0.0359 0.0983 0.306 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 8.26e-01 0.018 0.0819 0.306 B_Memory LOneK1K
ENSG00000134644 PUM1 -352451 sc-eQTL 3.13e-01 0.0732 0.0724 0.306 B_Memory LOneK1K
ENSG00000162510 MATN1 -10045 sc-eQTL 6.76e-02 0.151 0.0821 0.306 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -44234 sc-eQTL 4.51e-01 0.0392 0.0519 0.306 B_Memory LOneK1K
ENSG00000162517 PEF1 -931356 sc-eQTL 7.62e-01 0.0261 0.0861 0.306 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -4964 sc-eQTL 9.06e-01 0.0081 0.0688 0.306 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -18153 sc-eQTL 1.55e-01 -0.107 0.0746 0.306 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -583248 sc-eQTL 6.39e-02 -0.167 0.0898 0.306 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 1.46e-01 -0.104 0.0712 0.306 B_Naive LOneK1K
ENSG00000134644 PUM1 -352451 sc-eQTL 7.35e-01 -0.023 0.0677 0.306 B_Naive LOneK1K
ENSG00000162510 MATN1 -10045 sc-eQTL 7.50e-01 -0.0208 0.0652 0.306 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -44234 sc-eQTL 3.56e-01 0.0424 0.0458 0.306 B_Naive LOneK1K
ENSG00000162517 PEF1 -931356 sc-eQTL 6.64e-01 -0.0364 0.0837 0.306 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -4964 sc-eQTL 1.94e-01 -0.0768 0.059 0.306 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -18153 sc-eQTL 6.31e-01 -0.0338 0.0703 0.306 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -583248 sc-eQTL 2.08e-01 -0.0963 0.0763 0.306 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 6.75e-01 -0.0363 0.0867 0.306 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -352451 sc-eQTL 7.95e-01 -0.0144 0.0553 0.306 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -44234 sc-eQTL 5.17e-01 -0.0315 0.0486 0.306 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -195218 sc-eQTL 1.30e-01 -0.15 0.0986 0.306 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -931356 sc-eQTL 9.61e-01 0.00343 0.0697 0.306 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -696025 sc-eQTL 1.94e-01 -0.132 0.102 0.306 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -792686 sc-eQTL 1.10e-02 0.211 0.0824 0.306 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -18153 sc-eQTL 4.06e-01 0.0651 0.0782 0.306 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -583248 sc-eQTL 2.16e-01 0.103 0.0832 0.308 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 5.62e-02 -0.174 0.0905 0.308 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -352451 sc-eQTL 6.40e-01 -0.035 0.0748 0.308 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -44234 sc-eQTL 1.00e-01 0.0981 0.0595 0.308 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -195218 sc-eQTL 5.88e-01 -0.0474 0.0874 0.308 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -931356 sc-eQTL 2.73e-02 -0.175 0.0785 0.308 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -696025 sc-eQTL 1.89e-01 -0.119 0.0903 0.308 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -792686 sc-eQTL 7.54e-01 0.027 0.086 0.308 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -18153 sc-eQTL 4.54e-01 0.0645 0.086 0.308 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -583248 sc-eQTL 6.72e-01 -0.0392 0.0926 0.308 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -583442 sc-eQTL 4.82e-01 -0.0445 0.0632 0.308 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -352451 sc-eQTL 6.73e-01 0.0293 0.0693 0.308 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -44234 sc-eQTL 3.98e-01 -0.0655 0.0773 0.308 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -931356 sc-eQTL 6.03e-01 -0.0306 0.0588 0.308 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -4964 sc-eQTL 2.83e-01 0.096 0.0891 0.308 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -18153 sc-eQTL 4.36e-01 -0.0601 0.077 0.308 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162510 MATN1 -10045 eQTL 0.000164 0.0778 0.0205 0.0188 0.0167 0.319
ENSG00000162511 LAPTM5 -44234 eQTL 0.0375 -0.0219 0.0105 0.0 0.0 0.319
ENSG00000186056 MATN1-AS1 -4964 eQTL 4.73e-05 -0.0538 0.0132 0.0 0.0 0.319

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162510 MATN1 -10045 0.000114 2.95e-05 6.15e-06 1.2e-05 3.16e-06 1.91e-05 3.71e-05 2.16e-06 2.12e-05 8.27e-06 2.38e-05 8.18e-06 3.85e-05 8.66e-06 5.22e-06 1.29e-05 1.02e-05 2.37e-05 6.06e-06 3.53e-06 9.65e-06 2.57e-05 2.69e-05 5.39e-06 3.02e-05 5.77e-06 8.03e-06 6.3e-06 3.11e-05 1.83e-05 1.31e-05 1.03e-06 1.44e-06 4.75e-06 6.46e-06 3.41e-06 1.84e-06 2.39e-06 2.73e-06 1.57e-06 9.98e-07 3.51e-05 4.42e-06 1.68e-07 2e-06 2.33e-06 3.43e-06 7.23e-07 4.43e-07