logo

Genes within 1Mb (chr1:30711916:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -584872 sc-eQTL 3.92e-01 -0.0652 0.076 0.596 B L1
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 3.03e-01 -0.0628 0.0608 0.596 B L1
ENSG00000134644 PUM1 -354075 sc-eQTL 3.74e-01 0.0455 0.0511 0.596 B L1
ENSG00000162510 MATN1 -11669 sc-eQTL 5.78e-02 -0.102 0.0533 0.596 B L1
ENSG00000162511 LAPTM5 -45858 sc-eQTL 3.01e-01 0.0436 0.042 0.596 B L1
ENSG00000162517 PEF1 -932980 sc-eQTL 4.75e-01 0.0455 0.0635 0.596 B L1
ENSG00000186056 MATN1-AS1 -6588 sc-eQTL 4.03e-01 -0.0413 0.0493 0.596 B L1
ENSG00000287510 AL137857.1 -19777 sc-eQTL 5.47e-01 0.0352 0.0584 0.596 B L1
ENSG00000060688 SNRNP40 -584872 sc-eQTL 6.29e-01 0.0319 0.0659 0.596 CD4T L1
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 2.69e-01 0.0569 0.0514 0.596 CD4T L1
ENSG00000134644 PUM1 -354075 sc-eQTL 7.75e-01 -0.0132 0.0459 0.596 CD4T L1
ENSG00000162511 LAPTM5 -45858 sc-eQTL 9.29e-01 0.00455 0.0508 0.596 CD4T L1
ENSG00000162517 PEF1 -932980 sc-eQTL 7.73e-01 0.0153 0.0531 0.596 CD4T L1
ENSG00000186056 MATN1-AS1 -6588 sc-eQTL 9.27e-01 -0.00417 0.0455 0.596 CD4T L1
ENSG00000287510 AL137857.1 -19777 sc-eQTL 4.86e-01 -0.038 0.0544 0.596 CD4T L1
ENSG00000060688 SNRNP40 -584872 sc-eQTL 5.12e-01 0.0565 0.086 0.596 CD8T L1
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 9.99e-01 -5.67e-05 0.0573 0.596 CD8T L1
ENSG00000134644 PUM1 -354075 sc-eQTL 8.77e-01 -0.0078 0.0505 0.596 CD8T L1
ENSG00000162511 LAPTM5 -45858 sc-eQTL 9.06e-01 0.00581 0.049 0.596 CD8T L1
ENSG00000162517 PEF1 -932980 sc-eQTL 5.83e-01 -0.0332 0.0603 0.596 CD8T L1
ENSG00000186056 MATN1-AS1 -6588 sc-eQTL 5.01e-01 -0.0387 0.0574 0.596 CD8T L1
ENSG00000287510 AL137857.1 -19777 sc-eQTL 8.93e-01 -0.00974 0.0722 0.596 CD8T L1
ENSG00000060688 SNRNP40 -584872 sc-eQTL 2.66e-01 -0.0856 0.0768 0.595 DC L1
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 3.20e-01 0.0907 0.091 0.595 DC L1
ENSG00000134644 PUM1 -354075 sc-eQTL 3.73e-01 0.0637 0.0713 0.595 DC L1
ENSG00000162511 LAPTM5 -45858 sc-eQTL 9.25e-01 0.00481 0.051 0.595 DC L1
ENSG00000162517 PEF1 -932980 sc-eQTL 5.82e-01 -0.0456 0.0827 0.595 DC L1
ENSG00000168528 SERINC2 -697649 sc-eQTL 7.61e-01 -0.0256 0.0841 0.595 DC L1
ENSG00000284543 LINC01226 -794310 sc-eQTL 6.33e-01 0.0267 0.0557 0.595 DC L1
ENSG00000287510 AL137857.1 -19777 sc-eQTL 8.94e-02 -0.137 0.0801 0.595 DC L1
ENSG00000060688 SNRNP40 -584872 sc-eQTL 6.80e-01 0.0247 0.0598 0.596 Mono L1
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 5.61e-01 -0.0431 0.074 0.596 Mono L1
ENSG00000134644 PUM1 -354075 sc-eQTL 5.83e-01 0.0261 0.0475 0.596 Mono L1
ENSG00000162511 LAPTM5 -45858 sc-eQTL 3.85e-01 0.038 0.0436 0.596 Mono L1
ENSG00000162512 SDC3 -196842 sc-eQTL 1.52e-01 -0.12 0.0836 0.596 Mono L1
ENSG00000162517 PEF1 -932980 sc-eQTL 5.39e-01 -0.0362 0.0589 0.596 Mono L1
ENSG00000168528 SERINC2 -697649 sc-eQTL 4.51e-01 -0.068 0.09 0.596 Mono L1
ENSG00000284543 LINC01226 -794310 sc-eQTL 6.36e-01 0.0376 0.0793 0.596 Mono L1
ENSG00000287510 AL137857.1 -19777 sc-eQTL 9.98e-01 0.000186 0.0694 0.596 Mono L1
ENSG00000060688 SNRNP40 -584872 sc-eQTL 9.57e-01 0.0045 0.0837 0.597 NK L1
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 3.36e-01 -0.0551 0.0572 0.597 NK L1
ENSG00000134644 PUM1 -354075 sc-eQTL 2.37e-01 0.0711 0.0599 0.597 NK L1
ENSG00000162511 LAPTM5 -45858 sc-eQTL 1.90e-01 -0.0906 0.0689 0.597 NK L1
ENSG00000162517 PEF1 -932980 sc-eQTL 4.21e-01 -0.0407 0.0504 0.597 NK L1
ENSG00000186056 MATN1-AS1 -6588 sc-eQTL 6.75e-01 -0.0326 0.0777 0.597 NK L1
ENSG00000287510 AL137857.1 -19777 sc-eQTL 8.12e-01 0.0171 0.0718 0.597 NK L1
ENSG00000060688 SNRNP40 -584872 sc-eQTL 7.09e-01 -0.0233 0.0624 0.596 Other_T L1
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 8.41e-01 0.0134 0.0667 0.596 Other_T L1
ENSG00000134644 PUM1 -354075 sc-eQTL 4.43e-02 -0.12 0.0594 0.596 Other_T L1
ENSG00000162511 LAPTM5 -45858 sc-eQTL 3.23e-01 0.0486 0.049 0.596 Other_T L1
ENSG00000162517 PEF1 -932980 sc-eQTL 1.61e-01 0.092 0.0653 0.596 Other_T L1
ENSG00000186056 MATN1-AS1 -6588 sc-eQTL 4.45e-01 0.0615 0.0804 0.596 Other_T L1
ENSG00000287510 AL137857.1 -19777 sc-eQTL 5.97e-01 -0.0443 0.0838 0.596 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -584872 sc-eQTL 5.88e-01 0.0533 0.0981 0.61 B_Activated L2
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 4.64e-01 0.0725 0.0989 0.61 B_Activated L2
ENSG00000134644 PUM1 -354075 sc-eQTL 6.21e-01 0.0456 0.0919 0.61 B_Activated L2
ENSG00000162510 MATN1 -11669 sc-eQTL 2.26e-01 -0.0972 0.0801 0.61 B_Activated L2
ENSG00000162511 LAPTM5 -45858 sc-eQTL 9.31e-01 0.00486 0.0561 0.61 B_Activated L2
ENSG00000162517 PEF1 -932980 sc-eQTL 6.10e-02 0.178 0.0945 0.61 B_Activated L2
ENSG00000186056 MATN1-AS1 -6588 sc-eQTL 4.37e-01 0.0705 0.0904 0.61 B_Activated L2
ENSG00000287510 AL137857.1 -19777 sc-eQTL 2.83e-01 -0.086 0.0798 0.61 B_Activated L2
ENSG00000060688 SNRNP40 -584872 sc-eQTL 4.44e-01 0.0718 0.0936 0.594 B_Intermediate L2
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 8.61e-01 0.0137 0.0781 0.594 B_Intermediate L2
ENSG00000134644 PUM1 -354075 sc-eQTL 4.39e-01 0.0571 0.0736 0.594 B_Intermediate L2
ENSG00000162510 MATN1 -11669 sc-eQTL 3.33e-02 0.163 0.0759 0.594 B_Intermediate L2
ENSG00000162511 LAPTM5 -45858 sc-eQTL 3.90e-01 0.0405 0.047 0.594 B_Intermediate L2
ENSG00000162517 PEF1 -932980 sc-eQTL 6.93e-01 -0.0345 0.0874 0.594 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -6588 sc-eQTL 7.15e-01 0.0241 0.0661 0.594 B_Intermediate L2
ENSG00000287510 AL137857.1 -19777 sc-eQTL 3.13e-01 -0.0747 0.0738 0.594 B_Intermediate L2
ENSG00000060688 SNRNP40 -584872 sc-eQTL 7.17e-01 0.0336 0.0925 0.599 B_Memory L2
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 4.85e-01 0.0596 0.0851 0.599 B_Memory L2
ENSG00000134644 PUM1 -354075 sc-eQTL 6.25e-01 0.0362 0.0741 0.599 B_Memory L2
ENSG00000162510 MATN1 -11669 sc-eQTL 9.40e-01 -0.00537 0.0709 0.599 B_Memory L2
ENSG00000162511 LAPTM5 -45858 sc-eQTL 1.07e-01 0.101 0.0625 0.599 B_Memory L2
ENSG00000162517 PEF1 -932980 sc-eQTL 7.59e-01 -0.0258 0.084 0.599 B_Memory L2
ENSG00000186056 MATN1-AS1 -6588 sc-eQTL 6.88e-01 0.0289 0.0719 0.599 B_Memory L2
ENSG00000287510 AL137857.1 -19777 sc-eQTL 6.12e-01 0.0428 0.0842 0.599 B_Memory L2
ENSG00000060688 SNRNP40 -584872 sc-eQTL 7.29e-01 -0.0291 0.0837 0.596 B_Naive1 L2
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 9.22e-01 -0.00709 0.0723 0.596 B_Naive1 L2
ENSG00000134644 PUM1 -354075 sc-eQTL 9.83e-01 0.00133 0.0638 0.596 B_Naive1 L2
ENSG00000162510 MATN1 -11669 sc-eQTL 1.16e-02 -0.162 0.0638 0.596 B_Naive1 L2
ENSG00000162511 LAPTM5 -45858 sc-eQTL 4.16e-01 0.0352 0.0432 0.596 B_Naive1 L2
ENSG00000162517 PEF1 -932980 sc-eQTL 1.46e-01 0.111 0.0759 0.596 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -6588 sc-eQTL 3.32e-01 -0.0551 0.0567 0.596 B_Naive1 L2
ENSG00000287510 AL137857.1 -19777 sc-eQTL 1.61e-02 0.168 0.0692 0.596 B_Naive1 L2
ENSG00000060688 SNRNP40 -584872 sc-eQTL 1.62e-01 -0.124 0.0885 0.597 B_Naive2 L2
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 6.60e-05 -0.288 0.0707 0.597 B_Naive2 L2
ENSG00000134644 PUM1 -354075 sc-eQTL 9.27e-01 -0.00661 0.0718 0.597 B_Naive2 L2
ENSG00000162510 MATN1 -11669 sc-eQTL 2.03e-01 -0.0878 0.0687 0.597 B_Naive2 L2
ENSG00000162511 LAPTM5 -45858 sc-eQTL 1.64e-01 0.0651 0.0466 0.597 B_Naive2 L2
ENSG00000162517 PEF1 -932980 sc-eQTL 7.16e-01 -0.0311 0.0852 0.597 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -6588 sc-eQTL 4.00e-01 -0.0574 0.0681 0.597 B_Naive2 L2
ENSG00000287510 AL137857.1 -19777 sc-eQTL 1.44e-01 -0.108 0.0733 0.597 B_Naive2 L2
ENSG00000060688 SNRNP40 -584872 sc-eQTL 2.83e-01 -0.0936 0.087 0.593 CD4_CTL L2
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 6.20e-01 0.0426 0.0857 0.593 CD4_CTL L2
ENSG00000134644 PUM1 -354075 sc-eQTL 2.80e-01 0.0909 0.0839 0.593 CD4_CTL L2
ENSG00000162511 LAPTM5 -45858 sc-eQTL 3.64e-01 -0.0681 0.0748 0.593 CD4_CTL L2
ENSG00000162517 PEF1 -932980 sc-eQTL 8.79e-01 0.0117 0.0769 0.593 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -6588 sc-eQTL 3.61e-01 0.0749 0.0819 0.593 CD4_CTL L2
ENSG00000287510 AL137857.1 -19777 sc-eQTL 8.59e-01 -0.0129 0.0724 0.593 CD4_CTL L2
ENSG00000060688 SNRNP40 -584872 sc-eQTL 9.64e-01 0.00313 0.0691 0.596 CD4_Naive L2
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 8.33e-01 -0.0129 0.0613 0.596 CD4_Naive L2
ENSG00000134644 PUM1 -354075 sc-eQTL 7.84e-01 0.0134 0.0489 0.596 CD4_Naive L2
ENSG00000162511 LAPTM5 -45858 sc-eQTL 9.82e-01 0.0012 0.0524 0.596 CD4_Naive L2
ENSG00000162517 PEF1 -932980 sc-eQTL 6.96e-01 0.0225 0.0575 0.596 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -6588 sc-eQTL 4.09e-01 -0.0439 0.0531 0.596 CD4_Naive L2
ENSG00000287510 AL137857.1 -19777 sc-eQTL 4.87e-01 0.0425 0.061 0.596 CD4_Naive L2
ENSG00000060688 SNRNP40 -584872 sc-eQTL 1.08e-01 0.139 0.086 0.596 CD4_TCM L2
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 3.36e-01 0.0671 0.0696 0.596 CD4_TCM L2
ENSG00000134644 PUM1 -354075 sc-eQTL 4.87e-01 -0.0429 0.0617 0.596 CD4_TCM L2
ENSG00000162511 LAPTM5 -45858 sc-eQTL 3.51e-01 0.0477 0.0511 0.596 CD4_TCM L2
ENSG00000162517 PEF1 -932980 sc-eQTL 6.92e-01 0.0272 0.0686 0.596 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -6588 sc-eQTL 7.58e-01 0.02 0.065 0.596 CD4_TCM L2
ENSG00000287510 AL137857.1 -19777 sc-eQTL 1.39e-03 -0.229 0.0707 0.596 CD4_TCM L2
ENSG00000060688 SNRNP40 -584872 sc-eQTL 5.67e-01 0.0493 0.086 0.596 CD4_TEM L2
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 1.92e-01 0.107 0.0817 0.596 CD4_TEM L2
ENSG00000134644 PUM1 -354075 sc-eQTL 5.93e-01 -0.0366 0.0683 0.596 CD4_TEM L2
ENSG00000162511 LAPTM5 -45858 sc-eQTL 8.28e-01 0.0151 0.0691 0.596 CD4_TEM L2
ENSG00000162517 PEF1 -932980 sc-eQTL 7.23e-01 0.0275 0.0774 0.596 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -6588 sc-eQTL 4.63e-01 -0.0594 0.0808 0.596 CD4_TEM L2
ENSG00000287510 AL137857.1 -19777 sc-eQTL 2.59e-01 0.09 0.0795 0.596 CD4_TEM L2
ENSG00000060688 SNRNP40 -584872 sc-eQTL 7.46e-01 0.0307 0.0945 0.596 CD8_CTL L2
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 2.54e-01 -0.0826 0.0723 0.596 CD8_CTL L2
ENSG00000134644 PUM1 -354075 sc-eQTL 4.94e-01 0.0482 0.0703 0.596 CD8_CTL L2
ENSG00000162511 LAPTM5 -45858 sc-eQTL 3.45e-01 -0.0736 0.0778 0.596 CD8_CTL L2
ENSG00000162517 PEF1 -932980 sc-eQTL 6.95e-01 0.0266 0.0679 0.596 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -6588 sc-eQTL 2.43e-01 -0.0957 0.0817 0.596 CD8_CTL L2
ENSG00000287510 AL137857.1 -19777 sc-eQTL 3.90e-01 -0.0663 0.077 0.596 CD8_CTL L2
ENSG00000060688 SNRNP40 -584872 sc-eQTL 5.46e-01 0.0523 0.0864 0.596 CD8_Naive L2
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 5.43e-01 0.0454 0.0745 0.596 CD8_Naive L2
ENSG00000134644 PUM1 -354075 sc-eQTL 1.63e-01 -0.0835 0.0597 0.596 CD8_Naive L2
ENSG00000162511 LAPTM5 -45858 sc-eQTL 2.11e-01 0.0719 0.0573 0.596 CD8_Naive L2
ENSG00000162517 PEF1 -932980 sc-eQTL 5.13e-01 -0.0523 0.0799 0.596 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -6588 sc-eQTL 7.90e-01 0.0191 0.0718 0.596 CD8_Naive L2
ENSG00000287510 AL137857.1 -19777 sc-eQTL 2.28e-01 0.0941 0.0779 0.596 CD8_Naive L2
ENSG00000060688 SNRNP40 -584872 sc-eQTL 7.65e-01 0.0283 0.0944 0.588 CD8_TCM L2
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 7.59e-01 0.0266 0.0865 0.588 CD8_TCM L2
ENSG00000134644 PUM1 -354075 sc-eQTL 3.38e-01 -0.0779 0.0812 0.588 CD8_TCM L2
ENSG00000162511 LAPTM5 -45858 sc-eQTL 4.67e-01 -0.0619 0.085 0.588 CD8_TCM L2
ENSG00000162517 PEF1 -932980 sc-eQTL 3.28e-01 -0.085 0.0868 0.588 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -6588 sc-eQTL 5.09e-01 0.052 0.0787 0.588 CD8_TCM L2
ENSG00000287510 AL137857.1 -19777 sc-eQTL 5.47e-01 0.048 0.0796 0.588 CD8_TCM L2
ENSG00000060688 SNRNP40 -584872 sc-eQTL 9.03e-01 -0.0112 0.0921 0.589 CD8_TEM L2
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 3.81e-01 0.0773 0.0882 0.589 CD8_TEM L2
ENSG00000134644 PUM1 -354075 sc-eQTL 4.09e-01 -0.0746 0.0901 0.589 CD8_TEM L2
ENSG00000162511 LAPTM5 -45858 sc-eQTL 8.05e-01 -0.021 0.0849 0.589 CD8_TEM L2
ENSG00000162517 PEF1 -932980 sc-eQTL 6.61e-01 -0.0351 0.0799 0.589 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -6588 sc-eQTL 2.49e-02 -0.197 0.087 0.589 CD8_TEM L2
ENSG00000287510 AL137857.1 -19777 sc-eQTL 2.39e-02 -0.179 0.0787 0.589 CD8_TEM L2
ENSG00000060688 SNRNP40 -584872 sc-eQTL 6.75e-01 0.0381 0.0909 0.593 MAIT L2
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 3.64e-01 0.0731 0.0804 0.593 MAIT L2
ENSG00000134644 PUM1 -354075 sc-eQTL 4.32e-01 -0.0608 0.0771 0.593 MAIT L2
ENSG00000162511 LAPTM5 -45858 sc-eQTL 7.46e-01 -0.0237 0.0728 0.593 MAIT L2
ENSG00000162517 PEF1 -932980 sc-eQTL 6.59e-01 0.0354 0.08 0.593 MAIT L2
ENSG00000186056 MATN1-AS1 -6588 sc-eQTL 5.72e-01 0.0458 0.0811 0.593 MAIT L2
ENSG00000287510 AL137857.1 -19777 sc-eQTL 2.86e-01 -0.0892 0.0834 0.593 MAIT L2
ENSG00000060688 SNRNP40 -584872 sc-eQTL 5.54e-01 0.0548 0.0926 0.598 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 3.21e-01 -0.0777 0.0781 0.598 NK_CD56bright L2
ENSG00000134644 PUM1 -354075 sc-eQTL 6.17e-01 0.0412 0.0822 0.598 NK_CD56bright L2
ENSG00000162511 LAPTM5 -45858 sc-eQTL 3.28e-01 0.0793 0.0809 0.598 NK_CD56bright L2
ENSG00000162517 PEF1 -932980 sc-eQTL 5.73e-01 -0.0444 0.0787 0.598 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -6588 sc-eQTL 9.15e-01 0.00868 0.0815 0.598 NK_CD56bright L2
ENSG00000287510 AL137857.1 -19777 sc-eQTL 2.90e-01 0.085 0.0801 0.598 NK_CD56bright L2
ENSG00000060688 SNRNP40 -584872 sc-eQTL 7.27e-01 -0.0309 0.0884 0.597 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 2.80e-01 -0.0706 0.0652 0.597 NK_CD56dim L2
ENSG00000134644 PUM1 -354075 sc-eQTL 6.31e-01 0.0323 0.0671 0.597 NK_CD56dim L2
ENSG00000162511 LAPTM5 -45858 sc-eQTL 7.79e-02 -0.126 0.0711 0.597 NK_CD56dim L2
ENSG00000162517 PEF1 -932980 sc-eQTL 3.20e-01 -0.0633 0.0635 0.597 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -6588 sc-eQTL 9.46e-01 -0.00609 0.0897 0.597 NK_CD56dim L2
ENSG00000287510 AL137857.1 -19777 sc-eQTL 9.02e-01 -0.00915 0.074 0.597 NK_CD56dim L2
ENSG00000060688 SNRNP40 -584872 sc-eQTL 7.11e-01 -0.0353 0.0949 0.605 NK_HLA L2
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 2.41e-02 0.19 0.0837 0.605 NK_HLA L2
ENSG00000134644 PUM1 -354075 sc-eQTL 2.20e-01 0.101 0.0823 0.605 NK_HLA L2
ENSG00000162511 LAPTM5 -45858 sc-eQTL 7.82e-01 -0.0218 0.0788 0.605 NK_HLA L2
ENSG00000162517 PEF1 -932980 sc-eQTL 2.61e-01 -0.0998 0.0885 0.605 NK_HLA L2
ENSG00000186056 MATN1-AS1 -6588 sc-eQTL 5.85e-01 0.0459 0.0838 0.605 NK_HLA L2
ENSG00000287510 AL137857.1 -19777 sc-eQTL 1.88e-01 -0.107 0.0807 0.605 NK_HLA L2
ENSG00000060688 SNRNP40 -584872 sc-eQTL 6.60e-01 -0.0382 0.0867 0.597 NK_cytokine L2
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 9.42e-01 0.00495 0.0677 0.597 NK_cytokine L2
ENSG00000134644 PUM1 -354075 sc-eQTL 1.61e-01 0.102 0.0728 0.597 NK_cytokine L2
ENSG00000162511 LAPTM5 -45858 sc-eQTL 4.59e-01 -0.0597 0.0805 0.597 NK_cytokine L2
ENSG00000162517 PEF1 -932980 sc-eQTL 8.91e-01 -0.00939 0.0686 0.597 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -6588 sc-eQTL 6.46e-01 -0.0392 0.0853 0.597 NK_cytokine L2
ENSG00000287510 AL137857.1 -19777 sc-eQTL 9.69e-01 0.00307 0.0794 0.597 NK_cytokine L2
ENSG00000060688 SNRNP40 -584872 sc-eQTL 6.28e-01 0.0498 0.102 0.596 PB L2
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 9.59e-01 -0.00607 0.119 0.596 PB L2
ENSG00000134644 PUM1 -354075 sc-eQTL 8.08e-01 -0.0251 0.103 0.596 PB L2
ENSG00000162510 MATN1 -11669 sc-eQTL 4.18e-01 0.078 0.0959 0.596 PB L2
ENSG00000162511 LAPTM5 -45858 sc-eQTL 5.34e-01 -0.0428 0.0686 0.596 PB L2
ENSG00000162517 PEF1 -932980 sc-eQTL 8.59e-01 -0.0189 0.106 0.596 PB L2
ENSG00000186056 MATN1-AS1 -6588 sc-eQTL 4.11e-01 0.0774 0.0937 0.596 PB L2
ENSG00000287510 AL137857.1 -19777 sc-eQTL 4.89e-01 -0.0694 0.0999 0.596 PB L2
ENSG00000060688 SNRNP40 -584872 sc-eQTL 4.62e-02 -0.133 0.0662 0.591 Pro_T L2
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 8.03e-01 -0.0213 0.0849 0.591 Pro_T L2
ENSG00000134644 PUM1 -354075 sc-eQTL 1.95e-01 -0.103 0.0789 0.591 Pro_T L2
ENSG00000162511 LAPTM5 -45858 sc-eQTL 6.78e-02 0.103 0.0564 0.591 Pro_T L2
ENSG00000162517 PEF1 -932980 sc-eQTL 3.69e-02 0.173 0.0825 0.591 Pro_T L2
ENSG00000186056 MATN1-AS1 -6588 sc-eQTL 3.01e-01 -0.0822 0.0792 0.591 Pro_T L2
ENSG00000287510 AL137857.1 -19777 sc-eQTL 3.98e-01 -0.0617 0.0729 0.591 Pro_T L2
ENSG00000060688 SNRNP40 -584872 sc-eQTL 8.15e-01 0.021 0.0897 0.596 Treg L2
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 3.85e-01 0.0754 0.0866 0.596 Treg L2
ENSG00000134644 PUM1 -354075 sc-eQTL 7.37e-01 -0.0233 0.0694 0.596 Treg L2
ENSG00000162511 LAPTM5 -45858 sc-eQTL 3.68e-01 -0.0716 0.0793 0.596 Treg L2
ENSG00000162517 PEF1 -932980 sc-eQTL 2.81e-01 -0.0926 0.0856 0.596 Treg L2
ENSG00000186056 MATN1-AS1 -6588 sc-eQTL 9.13e-02 0.136 0.0805 0.596 Treg L2
ENSG00000287510 AL137857.1 -19777 sc-eQTL 4.14e-01 -0.0661 0.0808 0.596 Treg L2
ENSG00000060688 SNRNP40 -584872 sc-eQTL 3.36e-01 -0.0847 0.0879 0.595 cDC L2
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 6.36e-01 -0.0452 0.0954 0.595 cDC L2
ENSG00000134644 PUM1 -354075 sc-eQTL 5.75e-01 0.046 0.0819 0.595 cDC L2
ENSG00000162511 LAPTM5 -45858 sc-eQTL 5.68e-01 0.0329 0.0574 0.595 cDC L2
ENSG00000162517 PEF1 -932980 sc-eQTL 6.39e-01 -0.0391 0.0831 0.595 cDC L2
ENSG00000168528 SERINC2 -697649 sc-eQTL 6.42e-01 -0.0344 0.0737 0.595 cDC L2
ENSG00000284543 LINC01226 -794310 sc-eQTL 4.83e-03 0.202 0.0709 0.595 cDC L2
ENSG00000287510 AL137857.1 -19777 sc-eQTL 1.41e-01 -0.115 0.0775 0.595 cDC L2
ENSG00000060688 SNRNP40 -584872 sc-eQTL 8.38e-01 -0.0147 0.0717 0.596 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 7.94e-01 -0.0209 0.08 0.596 cMono_IL1B L2
ENSG00000134644 PUM1 -354075 sc-eQTL 8.76e-01 0.00846 0.0542 0.596 cMono_IL1B L2
ENSG00000162511 LAPTM5 -45858 sc-eQTL 5.11e-01 0.0313 0.0475 0.596 cMono_IL1B L2
ENSG00000162512 SDC3 -196842 sc-eQTL 4.10e-01 -0.0738 0.0894 0.596 cMono_IL1B L2
ENSG00000162517 PEF1 -932980 sc-eQTL 8.11e-01 -0.0175 0.0732 0.596 cMono_IL1B L2
ENSG00000168528 SERINC2 -697649 sc-eQTL 4.82e-01 -0.0638 0.0905 0.596 cMono_IL1B L2
ENSG00000284543 LINC01226 -794310 sc-eQTL 4.44e-01 0.0613 0.08 0.596 cMono_IL1B L2
ENSG00000287510 AL137857.1 -19777 sc-eQTL 8.03e-01 0.0186 0.0747 0.596 cMono_IL1B L2
ENSG00000060688 SNRNP40 -584872 sc-eQTL 8.62e-01 -0.0132 0.0759 0.596 cMono_S100A L2
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 7.02e-01 0.0344 0.0896 0.596 cMono_S100A L2
ENSG00000134644 PUM1 -354075 sc-eQTL 6.62e-01 0.0284 0.0648 0.596 cMono_S100A L2
ENSG00000162511 LAPTM5 -45858 sc-eQTL 7.39e-01 0.0166 0.0498 0.596 cMono_S100A L2
ENSG00000162512 SDC3 -196842 sc-eQTL 9.37e-01 0.00678 0.086 0.596 cMono_S100A L2
ENSG00000162517 PEF1 -932980 sc-eQTL 5.45e-01 -0.047 0.0776 0.596 cMono_S100A L2
ENSG00000168528 SERINC2 -697649 sc-eQTL 4.21e-01 -0.0733 0.091 0.596 cMono_S100A L2
ENSG00000284543 LINC01226 -794310 sc-eQTL 5.73e-01 0.0418 0.0739 0.596 cMono_S100A L2
ENSG00000287510 AL137857.1 -19777 sc-eQTL 9.02e-01 0.00917 0.0743 0.596 cMono_S100A L2
ENSG00000060688 SNRNP40 -584872 sc-eQTL 9.02e-01 0.014 0.114 0.576 gdT L2
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 7.55e-01 0.0305 0.0975 0.576 gdT L2
ENSG00000134644 PUM1 -354075 sc-eQTL 3.63e-01 0.0914 0.1 0.576 gdT L2
ENSG00000162511 LAPTM5 -45858 sc-eQTL 7.00e-01 -0.0422 0.109 0.576 gdT L2
ENSG00000162517 PEF1 -932980 sc-eQTL 9.12e-01 0.011 0.1 0.576 gdT L2
ENSG00000186056 MATN1-AS1 -6588 sc-eQTL 9.20e-01 -0.0102 0.101 0.576 gdT L2
ENSG00000287510 AL137857.1 -19777 sc-eQTL 7.34e-01 -0.0333 0.0977 0.576 gdT L2
ENSG00000060688 SNRNP40 -584872 sc-eQTL 9.66e-01 0.00354 0.0842 0.593 intMono L2
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 2.47e-01 -0.105 0.0902 0.593 intMono L2
ENSG00000134644 PUM1 -354075 sc-eQTL 8.84e-01 -0.0112 0.0768 0.593 intMono L2
ENSG00000162511 LAPTM5 -45858 sc-eQTL 3.64e-02 0.125 0.0596 0.593 intMono L2
ENSG00000162512 SDC3 -196842 sc-eQTL 3.77e-01 -0.0729 0.0823 0.593 intMono L2
ENSG00000162517 PEF1 -932980 sc-eQTL 4.88e-01 -0.0601 0.0866 0.593 intMono L2
ENSG00000168528 SERINC2 -697649 sc-eQTL 7.05e-02 -0.156 0.0856 0.593 intMono L2
ENSG00000284543 LINC01226 -794310 sc-eQTL 9.30e-01 -0.00722 0.0818 0.593 intMono L2
ENSG00000287510 AL137857.1 -19777 sc-eQTL 7.67e-01 -0.0243 0.0818 0.593 intMono L2
ENSG00000060688 SNRNP40 -584872 sc-eQTL 1.95e-01 0.103 0.0788 0.59 ncMono L2
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 4.71e-01 -0.0609 0.0843 0.59 ncMono L2
ENSG00000134644 PUM1 -354075 sc-eQTL 3.19e-01 0.0687 0.0688 0.59 ncMono L2
ENSG00000162511 LAPTM5 -45858 sc-eQTL 7.75e-01 0.0179 0.0626 0.59 ncMono L2
ENSG00000162512 SDC3 -196842 sc-eQTL 1.68e-01 -0.0966 0.0699 0.59 ncMono L2
ENSG00000162517 PEF1 -932980 sc-eQTL 8.71e-01 0.0131 0.0805 0.59 ncMono L2
ENSG00000168528 SERINC2 -697649 sc-eQTL 6.67e-01 -0.033 0.0766 0.59 ncMono L2
ENSG00000284543 LINC01226 -794310 sc-eQTL 2.78e-01 -0.0831 0.0763 0.59 ncMono L2
ENSG00000287510 AL137857.1 -19777 sc-eQTL 1.09e-01 -0.127 0.0789 0.59 ncMono L2
ENSG00000060688 SNRNP40 -584872 sc-eQTL 5.96e-01 -0.0465 0.0876 0.579 pDC L2
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 1.63e-01 0.134 0.0956 0.579 pDC L2
ENSG00000134644 PUM1 -354075 sc-eQTL 8.07e-01 -0.0195 0.0798 0.579 pDC L2
ENSG00000162511 LAPTM5 -45858 sc-eQTL 6.52e-01 0.0335 0.0741 0.579 pDC L2
ENSG00000162517 PEF1 -932980 sc-eQTL 5.99e-01 -0.0507 0.0962 0.579 pDC L2
ENSG00000168528 SERINC2 -697649 sc-eQTL 3.82e-01 -0.0786 0.0897 0.579 pDC L2
ENSG00000284543 LINC01226 -794310 sc-eQTL 5.77e-01 -0.039 0.0698 0.579 pDC L2
ENSG00000287510 AL137857.1 -19777 sc-eQTL 7.96e-01 0.0213 0.0821 0.579 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -584872 sc-eQTL 3.73e-01 0.0797 0.0893 0.596 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 3.71e-01 0.0666 0.0743 0.596 B_Memory LOneK1K
ENSG00000134644 PUM1 -354075 sc-eQTL 2.48e-01 0.0763 0.0658 0.596 B_Memory LOneK1K
ENSG00000162510 MATN1 -11669 sc-eQTL 1.57e-01 0.106 0.0749 0.596 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -45858 sc-eQTL 7.96e-02 0.0827 0.0469 0.596 B_Memory LOneK1K
ENSG00000162517 PEF1 -932980 sc-eQTL 8.62e-01 -0.0137 0.0783 0.596 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -6588 sc-eQTL 4.33e-01 0.049 0.0624 0.596 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -19777 sc-eQTL 1.66e-01 -0.0942 0.0678 0.596 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -584872 sc-eQTL 1.66e-01 -0.112 0.0808 0.596 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 5.38e-02 -0.123 0.0636 0.596 B_Naive LOneK1K
ENSG00000134644 PUM1 -354075 sc-eQTL 7.81e-01 -0.0169 0.0607 0.596 B_Naive LOneK1K
ENSG00000162510 MATN1 -11669 sc-eQTL 5.53e-03 -0.161 0.0574 0.596 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -45858 sc-eQTL 3.95e-01 0.0351 0.0411 0.596 B_Naive LOneK1K
ENSG00000162517 PEF1 -932980 sc-eQTL 3.68e-01 0.0676 0.075 0.596 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -6588 sc-eQTL 2.41e-01 -0.0623 0.053 0.596 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -19777 sc-eQTL 1.01e-01 0.103 0.0627 0.596 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -584872 sc-eQTL 5.80e-01 -0.0378 0.0682 0.596 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 8.74e-01 -0.0122 0.0773 0.596 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -354075 sc-eQTL 6.44e-01 0.0228 0.0493 0.596 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -45858 sc-eQTL 6.50e-01 0.0197 0.0433 0.596 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -196842 sc-eQTL 4.73e-01 -0.0635 0.0883 0.596 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -932980 sc-eQTL 7.31e-01 -0.0214 0.0621 0.596 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -697649 sc-eQTL 4.91e-01 -0.0626 0.0908 0.596 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -794310 sc-eQTL 4.59e-01 0.0552 0.0744 0.596 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -19777 sc-eQTL 5.79e-01 0.0388 0.0697 0.596 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -584872 sc-eQTL 1.56e-01 0.108 0.076 0.597 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 3.11e-01 -0.0846 0.0833 0.597 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -354075 sc-eQTL 4.24e-01 0.0547 0.0683 0.597 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -45858 sc-eQTL 8.92e-02 0.0928 0.0544 0.597 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -196842 sc-eQTL 2.61e-01 -0.0898 0.0797 0.597 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -932980 sc-eQTL 4.70e-01 -0.0525 0.0725 0.597 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -697649 sc-eQTL 1.52e-01 -0.119 0.0825 0.597 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -794310 sc-eQTL 5.07e-01 -0.0523 0.0786 0.597 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -19777 sc-eQTL 2.88e-01 -0.0837 0.0786 0.597 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -584872 sc-eQTL 8.69e-01 -0.0139 0.0842 0.597 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -585066 sc-eQTL 6.01e-01 -0.0301 0.0575 0.597 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -354075 sc-eQTL 2.73e-01 0.069 0.0628 0.597 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -45858 sc-eQTL 1.63e-01 -0.0981 0.0701 0.597 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -932980 sc-eQTL 5.72e-01 -0.0303 0.0535 0.597 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -6588 sc-eQTL 5.81e-01 -0.0449 0.0812 0.597 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -19777 sc-eQTL 2.95e-01 -0.0734 0.0699 0.597 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000168528 SERINC2 -697649 eQTL 0.0266 0.0882 0.0397 0.0 0.0 0.361
ENSG00000186056 MATN1-AS1 -6588 eQTL 7.59e-02 -0.023 0.013 0.0 0.00741 0.361

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162510 \N -11669 1.98e-05 2.54e-05 5.06e-06 1.35e-05 3.44e-06 1.09e-05 3.18e-05 3.78e-06 2.39e-05 1.2e-05 2.99e-05 1.21e-05 3.85e-05 9.56e-06 5.45e-06 1.22e-05 1.13e-05 1.98e-05 6.06e-06 5.52e-06 9.96e-06 2.33e-05 2.39e-05 7.18e-06 3.43e-05 5.97e-06 9.38e-06 8.99e-06 2.43e-05 2.06e-05 1.53e-05 1.61e-06 1.79e-06 5.45e-06 9.74e-06 4.48e-06 2.08e-06 2.76e-06 3.56e-06 2.79e-06 1.69e-06 2.87e-05 2.67e-06 2.86e-07 1.97e-06 2.75e-06 3.35e-06 1.36e-06 1.52e-06