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Genes within 1Mb (chr1:30710920:G:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -585868 sc-eQTL 1.83e-01 -0.114 0.0855 0.308 B L1
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 2.71e-01 -0.0756 0.0686 0.308 B L1
ENSG00000134644 PUM1 -355071 sc-eQTL 9.46e-01 0.0039 0.0577 0.308 B L1
ENSG00000162510 MATN1 -12665 sc-eQTL 9.87e-01 -0.000969 0.0607 0.308 B L1
ENSG00000162511 LAPTM5 -46854 sc-eQTL 4.49e-01 0.036 0.0474 0.308 B L1
ENSG00000162517 PEF1 -933976 sc-eQTL 8.15e-01 0.0168 0.0717 0.308 B L1
ENSG00000186056 MATN1-AS1 -7584 sc-eQTL 1.09e-01 -0.0892 0.0553 0.308 B L1
ENSG00000287510 AL137857.1 -20773 sc-eQTL 8.77e-02 -0.112 0.0654 0.308 B L1
ENSG00000060688 SNRNP40 -585868 sc-eQTL 1.95e-01 0.0953 0.0733 0.308 CD4T L1
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 5.83e-01 -0.0315 0.0574 0.308 CD4T L1
ENSG00000134644 PUM1 -355071 sc-eQTL 8.63e-01 -0.00886 0.0512 0.308 CD4T L1
ENSG00000162511 LAPTM5 -46854 sc-eQTL 8.01e-01 0.0143 0.0567 0.308 CD4T L1
ENSG00000162517 PEF1 -933976 sc-eQTL 4.61e-01 -0.0437 0.0592 0.308 CD4T L1
ENSG00000186056 MATN1-AS1 -7584 sc-eQTL 5.52e-01 -0.0302 0.0507 0.308 CD4T L1
ENSG00000287510 AL137857.1 -20773 sc-eQTL 3.95e-01 -0.0517 0.0606 0.308 CD4T L1
ENSG00000060688 SNRNP40 -585868 sc-eQTL 9.04e-01 -0.0119 0.0983 0.308 CD8T L1
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 5.95e-01 0.0348 0.0654 0.308 CD8T L1
ENSG00000134644 PUM1 -355071 sc-eQTL 6.01e-01 -0.0301 0.0576 0.308 CD8T L1
ENSG00000162511 LAPTM5 -46854 sc-eQTL 2.29e-01 0.0673 0.0557 0.308 CD8T L1
ENSG00000162517 PEF1 -933976 sc-eQTL 2.27e-01 -0.0832 0.0687 0.308 CD8T L1
ENSG00000186056 MATN1-AS1 -7584 sc-eQTL 7.59e-01 -0.0201 0.0655 0.308 CD8T L1
ENSG00000287510 AL137857.1 -20773 sc-eQTL 9.22e-01 -0.0081 0.0824 0.308 CD8T L1
ENSG00000060688 SNRNP40 -585868 sc-eQTL 1.66e-01 -0.121 0.087 0.313 DC L1
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 8.58e-01 0.0185 0.103 0.313 DC L1
ENSG00000134644 PUM1 -355071 sc-eQTL 1.13e-01 0.128 0.0805 0.313 DC L1
ENSG00000162511 LAPTM5 -46854 sc-eQTL 7.68e-01 0.0171 0.0579 0.313 DC L1
ENSG00000162517 PEF1 -933976 sc-eQTL 9.78e-01 -0.00261 0.0938 0.313 DC L1
ENSG00000168528 SERINC2 -698645 sc-eQTL 7.09e-01 -0.0357 0.0954 0.313 DC L1
ENSG00000284543 LINC01226 -795306 sc-eQTL 1.27e-01 0.0963 0.0628 0.313 DC L1
ENSG00000287510 AL137857.1 -20773 sc-eQTL 1.44e-01 -0.134 0.091 0.313 DC L1
ENSG00000060688 SNRNP40 -585868 sc-eQTL 7.16e-01 -0.0246 0.0675 0.308 Mono L1
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 3.81e-01 -0.0734 0.0836 0.308 Mono L1
ENSG00000134644 PUM1 -355071 sc-eQTL 6.72e-01 -0.0227 0.0537 0.308 Mono L1
ENSG00000162511 LAPTM5 -46854 sc-eQTL 7.70e-01 0.0145 0.0494 0.308 Mono L1
ENSG00000162512 SDC3 -197838 sc-eQTL 3.53e-01 -0.0882 0.0947 0.308 Mono L1
ENSG00000162517 PEF1 -933976 sc-eQTL 2.79e-01 -0.072 0.0664 0.308 Mono L1
ENSG00000168528 SERINC2 -698645 sc-eQTL 1.72e-01 -0.139 0.101 0.308 Mono L1
ENSG00000284543 LINC01226 -795306 sc-eQTL 4.46e-02 0.18 0.0888 0.308 Mono L1
ENSG00000287510 AL137857.1 -20773 sc-eQTL 4.20e-01 0.0632 0.0783 0.308 Mono L1
ENSG00000060688 SNRNP40 -585868 sc-eQTL 8.97e-01 -0.0121 0.0932 0.309 NK L1
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 2.15e-01 -0.0791 0.0636 0.309 NK L1
ENSG00000134644 PUM1 -355071 sc-eQTL 7.04e-01 0.0254 0.0669 0.309 NK L1
ENSG00000162511 LAPTM5 -46854 sc-eQTL 1.46e-01 -0.112 0.0767 0.309 NK L1
ENSG00000162517 PEF1 -933976 sc-eQTL 5.50e-01 -0.0337 0.0562 0.309 NK L1
ENSG00000186056 MATN1-AS1 -7584 sc-eQTL 3.62e-01 0.0789 0.0864 0.309 NK L1
ENSG00000287510 AL137857.1 -20773 sc-eQTL 6.87e-01 -0.0322 0.0799 0.309 NK L1
ENSG00000060688 SNRNP40 -585868 sc-eQTL 4.11e-01 -0.058 0.0704 0.308 Other_T L1
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 9.03e-01 0.00923 0.0754 0.308 Other_T L1
ENSG00000134644 PUM1 -355071 sc-eQTL 5.63e-01 -0.0392 0.0677 0.308 Other_T L1
ENSG00000162511 LAPTM5 -46854 sc-eQTL 8.81e-02 0.0946 0.0552 0.308 Other_T L1
ENSG00000162517 PEF1 -933976 sc-eQTL 2.36e-02 0.167 0.0733 0.308 Other_T L1
ENSG00000186056 MATN1-AS1 -7584 sc-eQTL 6.97e-01 0.0354 0.091 0.308 Other_T L1
ENSG00000287510 AL137857.1 -20773 sc-eQTL 2.58e-01 -0.107 0.0945 0.308 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -585868 sc-eQTL 3.67e-01 0.0998 0.11 0.321 B_Activated L2
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 2.89e-01 0.118 0.111 0.321 B_Activated L2
ENSG00000134644 PUM1 -355071 sc-eQTL 9.79e-01 -0.00275 0.104 0.321 B_Activated L2
ENSG00000162510 MATN1 -12665 sc-eQTL 9.18e-02 -0.153 0.09 0.321 B_Activated L2
ENSG00000162511 LAPTM5 -46854 sc-eQTL 4.14e-01 -0.0517 0.0631 0.321 B_Activated L2
ENSG00000162517 PEF1 -933976 sc-eQTL 5.94e-01 0.0574 0.108 0.321 B_Activated L2
ENSG00000186056 MATN1-AS1 -7584 sc-eQTL 8.26e-01 -0.0225 0.102 0.321 B_Activated L2
ENSG00000287510 AL137857.1 -20773 sc-eQTL 7.92e-03 -0.238 0.0885 0.321 B_Activated L2
ENSG00000060688 SNRNP40 -585868 sc-eQTL 5.64e-01 0.0607 0.105 0.309 B_Intermediate L2
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 6.28e-01 -0.0425 0.0877 0.309 B_Intermediate L2
ENSG00000134644 PUM1 -355071 sc-eQTL 8.61e-01 -0.0145 0.0828 0.309 B_Intermediate L2
ENSG00000162510 MATN1 -12665 sc-eQTL 2.05e-02 0.199 0.0851 0.309 B_Intermediate L2
ENSG00000162511 LAPTM5 -46854 sc-eQTL 8.20e-01 -0.012 0.0529 0.309 B_Intermediate L2
ENSG00000162517 PEF1 -933976 sc-eQTL 7.93e-01 -0.0258 0.0982 0.309 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -7584 sc-eQTL 9.40e-01 0.00563 0.0742 0.309 B_Intermediate L2
ENSG00000287510 AL137857.1 -20773 sc-eQTL 1.33e-01 -0.125 0.0826 0.309 B_Intermediate L2
ENSG00000060688 SNRNP40 -585868 sc-eQTL 7.53e-01 -0.0322 0.102 0.308 B_Memory L2
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 4.09e-01 0.0779 0.0942 0.308 B_Memory L2
ENSG00000134644 PUM1 -355071 sc-eQTL 1.46e-01 0.119 0.0817 0.308 B_Memory L2
ENSG00000162510 MATN1 -12665 sc-eQTL 8.14e-02 0.137 0.078 0.308 B_Memory L2
ENSG00000162511 LAPTM5 -46854 sc-eQTL 5.43e-01 0.0424 0.0696 0.308 B_Memory L2
ENSG00000162517 PEF1 -933976 sc-eQTL 8.27e-01 0.0204 0.093 0.308 B_Memory L2
ENSG00000186056 MATN1-AS1 -7584 sc-eQTL 9.48e-01 -0.00523 0.0797 0.308 B_Memory L2
ENSG00000287510 AL137857.1 -20773 sc-eQTL 3.04e-01 0.096 0.0931 0.308 B_Memory L2
ENSG00000060688 SNRNP40 -585868 sc-eQTL 3.18e-01 -0.0937 0.0937 0.308 B_Naive1 L2
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 9.23e-01 0.00783 0.0811 0.308 B_Naive1 L2
ENSG00000134644 PUM1 -355071 sc-eQTL 3.45e-01 -0.0676 0.0714 0.308 B_Naive1 L2
ENSG00000162510 MATN1 -12665 sc-eQTL 9.26e-01 -0.00678 0.0726 0.308 B_Naive1 L2
ENSG00000162511 LAPTM5 -46854 sc-eQTL 5.71e-01 0.0275 0.0485 0.308 B_Naive1 L2
ENSG00000162517 PEF1 -933976 sc-eQTL 6.73e-01 0.0362 0.0855 0.308 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -7584 sc-eQTL 2.97e-01 -0.0664 0.0635 0.308 B_Naive1 L2
ENSG00000287510 AL137857.1 -20773 sc-eQTL 6.56e-01 -0.0351 0.0786 0.308 B_Naive1 L2
ENSG00000060688 SNRNP40 -585868 sc-eQTL 9.18e-02 -0.168 0.0995 0.307 B_Naive2 L2
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 5.67e-04 -0.281 0.0804 0.307 B_Naive2 L2
ENSG00000134644 PUM1 -355071 sc-eQTL 5.73e-01 0.0457 0.0808 0.307 B_Naive2 L2
ENSG00000162510 MATN1 -12665 sc-eQTL 7.97e-01 -0.02 0.0777 0.307 B_Naive2 L2
ENSG00000162511 LAPTM5 -46854 sc-eQTL 5.40e-01 0.0323 0.0527 0.307 B_Naive2 L2
ENSG00000162517 PEF1 -933976 sc-eQTL 2.55e-01 -0.109 0.0957 0.307 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -7584 sc-eQTL 3.50e-01 -0.0718 0.0766 0.307 B_Naive2 L2
ENSG00000287510 AL137857.1 -20773 sc-eQTL 1.67e-01 -0.115 0.0826 0.307 B_Naive2 L2
ENSG00000060688 SNRNP40 -585868 sc-eQTL 9.09e-01 -0.0116 0.101 0.307 CD4_CTL L2
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 4.11e-01 0.0815 0.0989 0.307 CD4_CTL L2
ENSG00000134644 PUM1 -355071 sc-eQTL 8.75e-01 0.0154 0.0972 0.307 CD4_CTL L2
ENSG00000162511 LAPTM5 -46854 sc-eQTL 7.53e-01 0.0272 0.0866 0.307 CD4_CTL L2
ENSG00000162517 PEF1 -933976 sc-eQTL 7.85e-01 0.0242 0.0888 0.307 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -7584 sc-eQTL 4.70e-01 0.0685 0.0946 0.307 CD4_CTL L2
ENSG00000287510 AL137857.1 -20773 sc-eQTL 2.34e-01 0.0996 0.0833 0.307 CD4_CTL L2
ENSG00000060688 SNRNP40 -585868 sc-eQTL 8.82e-01 -0.0115 0.0774 0.308 CD4_Naive L2
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 2.48e-01 -0.0794 0.0684 0.308 CD4_Naive L2
ENSG00000134644 PUM1 -355071 sc-eQTL 8.67e-01 -0.00917 0.0548 0.308 CD4_Naive L2
ENSG00000162511 LAPTM5 -46854 sc-eQTL 7.79e-01 -0.0165 0.0587 0.308 CD4_Naive L2
ENSG00000162517 PEF1 -933976 sc-eQTL 2.83e-01 -0.0691 0.0642 0.308 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -7584 sc-eQTL 9.14e-02 -0.1 0.0592 0.308 CD4_Naive L2
ENSG00000287510 AL137857.1 -20773 sc-eQTL 9.19e-01 0.00701 0.0685 0.308 CD4_Naive L2
ENSG00000060688 SNRNP40 -585868 sc-eQTL 6.67e-02 0.178 0.0963 0.308 CD4_TCM L2
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 7.67e-01 0.0232 0.0783 0.308 CD4_TCM L2
ENSG00000134644 PUM1 -355071 sc-eQTL 9.14e-01 0.00748 0.0693 0.308 CD4_TCM L2
ENSG00000162511 LAPTM5 -46854 sc-eQTL 3.07e-01 0.0587 0.0573 0.308 CD4_TCM L2
ENSG00000162517 PEF1 -933976 sc-eQTL 6.17e-01 -0.0386 0.077 0.308 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -7584 sc-eQTL 7.22e-01 0.0259 0.0729 0.308 CD4_TCM L2
ENSG00000287510 AL137857.1 -20773 sc-eQTL 2.63e-01 -0.091 0.081 0.308 CD4_TCM L2
ENSG00000060688 SNRNP40 -585868 sc-eQTL 4.00e-01 0.0806 0.0955 0.308 CD4_TEM L2
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 2.26e-01 0.11 0.0908 0.308 CD4_TEM L2
ENSG00000134644 PUM1 -355071 sc-eQTL 5.66e-01 -0.0437 0.0759 0.308 CD4_TEM L2
ENSG00000162511 LAPTM5 -46854 sc-eQTL 4.23e-01 -0.0615 0.0767 0.308 CD4_TEM L2
ENSG00000162517 PEF1 -933976 sc-eQTL 9.22e-01 -0.0084 0.086 0.308 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -7584 sc-eQTL 8.69e-01 -0.0149 0.0898 0.308 CD4_TEM L2
ENSG00000287510 AL137857.1 -20773 sc-eQTL 1.66e-01 0.122 0.0881 0.308 CD4_TEM L2
ENSG00000060688 SNRNP40 -585868 sc-eQTL 9.74e-01 -0.00351 0.107 0.308 CD8_CTL L2
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 2.48e-01 -0.0951 0.082 0.308 CD8_CTL L2
ENSG00000134644 PUM1 -355071 sc-eQTL 1.84e-01 0.106 0.0795 0.308 CD8_CTL L2
ENSG00000162511 LAPTM5 -46854 sc-eQTL 9.59e-01 -0.0045 0.0885 0.308 CD8_CTL L2
ENSG00000162517 PEF1 -933976 sc-eQTL 9.08e-01 -0.0089 0.077 0.308 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -7584 sc-eQTL 3.47e-01 -0.0874 0.0928 0.308 CD8_CTL L2
ENSG00000287510 AL137857.1 -20773 sc-eQTL 7.05e-01 -0.0331 0.0874 0.308 CD8_CTL L2
ENSG00000060688 SNRNP40 -585868 sc-eQTL 5.47e-01 0.0578 0.0959 0.308 CD8_Naive L2
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 1.86e-01 0.109 0.0824 0.308 CD8_Naive L2
ENSG00000134644 PUM1 -355071 sc-eQTL 3.04e-02 -0.144 0.0659 0.308 CD8_Naive L2
ENSG00000162511 LAPTM5 -46854 sc-eQTL 2.65e-01 0.0712 0.0636 0.308 CD8_Naive L2
ENSG00000162517 PEF1 -933976 sc-eQTL 4.74e-01 -0.0635 0.0886 0.308 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -7584 sc-eQTL 9.48e-01 -0.00519 0.0797 0.308 CD8_Naive L2
ENSG00000287510 AL137857.1 -20773 sc-eQTL 1.39e-01 0.128 0.0863 0.308 CD8_Naive L2
ENSG00000060688 SNRNP40 -585868 sc-eQTL 2.77e-01 0.117 0.107 0.301 CD8_TCM L2
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 6.90e-01 0.0394 0.0987 0.301 CD8_TCM L2
ENSG00000134644 PUM1 -355071 sc-eQTL 6.44e-01 -0.0429 0.0928 0.301 CD8_TCM L2
ENSG00000162511 LAPTM5 -46854 sc-eQTL 6.56e-01 -0.0434 0.0971 0.301 CD8_TCM L2
ENSG00000162517 PEF1 -933976 sc-eQTL 2.06e-01 -0.125 0.0989 0.301 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -7584 sc-eQTL 4.58e-01 0.0667 0.0898 0.301 CD8_TCM L2
ENSG00000287510 AL137857.1 -20773 sc-eQTL 1.21e-01 0.141 0.0903 0.301 CD8_TCM L2
ENSG00000060688 SNRNP40 -585868 sc-eQTL 2.05e-01 -0.131 0.103 0.306 CD8_TEM L2
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 9.18e-01 0.0102 0.0989 0.306 CD8_TEM L2
ENSG00000134644 PUM1 -355071 sc-eQTL 9.17e-01 0.0106 0.101 0.306 CD8_TEM L2
ENSG00000162511 LAPTM5 -46854 sc-eQTL 6.84e-01 -0.0387 0.095 0.306 CD8_TEM L2
ENSG00000162517 PEF1 -933976 sc-eQTL 1.82e-01 -0.119 0.0891 0.306 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -7584 sc-eQTL 5.60e-02 -0.188 0.0977 0.306 CD8_TEM L2
ENSG00000287510 AL137857.1 -20773 sc-eQTL 9.90e-02 -0.147 0.0887 0.306 CD8_TEM L2
ENSG00000060688 SNRNP40 -585868 sc-eQTL 6.63e-01 -0.0451 0.103 0.305 MAIT L2
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 1.88e-01 0.121 0.0911 0.305 MAIT L2
ENSG00000134644 PUM1 -355071 sc-eQTL 7.67e-01 -0.026 0.0877 0.305 MAIT L2
ENSG00000162511 LAPTM5 -46854 sc-eQTL 8.58e-01 0.0148 0.0828 0.305 MAIT L2
ENSG00000162517 PEF1 -933976 sc-eQTL 3.62e-01 0.0829 0.0908 0.305 MAIT L2
ENSG00000186056 MATN1-AS1 -7584 sc-eQTL 4.99e-01 0.0623 0.0921 0.305 MAIT L2
ENSG00000287510 AL137857.1 -20773 sc-eQTL 1.68e-01 -0.131 0.0946 0.305 MAIT L2
ENSG00000060688 SNRNP40 -585868 sc-eQTL 3.19e-01 0.104 0.104 0.307 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 8.58e-02 -0.151 0.0875 0.307 NK_CD56bright L2
ENSG00000134644 PUM1 -355071 sc-eQTL 9.83e-01 -0.00195 0.0925 0.307 NK_CD56bright L2
ENSG00000162511 LAPTM5 -46854 sc-eQTL 5.95e-01 -0.0486 0.0912 0.307 NK_CD56bright L2
ENSG00000162517 PEF1 -933976 sc-eQTL 9.19e-01 0.00898 0.0886 0.307 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -7584 sc-eQTL 3.26e-02 -0.195 0.0907 0.307 NK_CD56bright L2
ENSG00000287510 AL137857.1 -20773 sc-eQTL 3.71e-01 -0.0808 0.0902 0.307 NK_CD56bright L2
ENSG00000060688 SNRNP40 -585868 sc-eQTL 7.91e-01 -0.0261 0.0987 0.31 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 1.46e-01 -0.106 0.0726 0.31 NK_CD56dim L2
ENSG00000134644 PUM1 -355071 sc-eQTL 8.83e-01 -0.011 0.0749 0.31 NK_CD56dim L2
ENSG00000162511 LAPTM5 -46854 sc-eQTL 1.70e-01 -0.11 0.0795 0.31 NK_CD56dim L2
ENSG00000162517 PEF1 -933976 sc-eQTL 2.74e-01 -0.0778 0.0708 0.31 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -7584 sc-eQTL 2.09e-01 0.126 0.0996 0.31 NK_CD56dim L2
ENSG00000287510 AL137857.1 -20773 sc-eQTL 6.73e-01 0.0348 0.0825 0.31 NK_CD56dim L2
ENSG00000060688 SNRNP40 -585868 sc-eQTL 9.17e-01 0.0108 0.104 0.313 NK_HLA L2
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 2.14e-01 0.116 0.0928 0.313 NK_HLA L2
ENSG00000134644 PUM1 -355071 sc-eQTL 5.23e-02 0.176 0.0899 0.313 NK_HLA L2
ENSG00000162511 LAPTM5 -46854 sc-eQTL 7.03e-01 0.033 0.0866 0.313 NK_HLA L2
ENSG00000162517 PEF1 -933976 sc-eQTL 7.84e-01 -0.0268 0.0976 0.313 NK_HLA L2
ENSG00000186056 MATN1-AS1 -7584 sc-eQTL 2.65e-01 0.103 0.0919 0.313 NK_HLA L2
ENSG00000287510 AL137857.1 -20773 sc-eQTL 1.74e-01 -0.121 0.0887 0.313 NK_HLA L2
ENSG00000060688 SNRNP40 -585868 sc-eQTL 2.88e-01 -0.103 0.0969 0.31 NK_cytokine L2
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 9.83e-01 -0.00161 0.0759 0.31 NK_cytokine L2
ENSG00000134644 PUM1 -355071 sc-eQTL 6.13e-01 0.0415 0.082 0.31 NK_cytokine L2
ENSG00000162511 LAPTM5 -46854 sc-eQTL 3.73e-01 -0.0805 0.0901 0.31 NK_cytokine L2
ENSG00000162517 PEF1 -933976 sc-eQTL 6.88e-01 0.0309 0.0769 0.31 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -7584 sc-eQTL 6.46e-01 0.0441 0.0957 0.31 NK_cytokine L2
ENSG00000287510 AL137857.1 -20773 sc-eQTL 4.10e-01 -0.0734 0.0889 0.31 NK_cytokine L2
ENSG00000060688 SNRNP40 -585868 sc-eQTL 3.04e-01 -0.117 0.113 0.315 PB L2
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 9.85e-01 -0.00252 0.132 0.315 PB L2
ENSG00000134644 PUM1 -355071 sc-eQTL 5.61e-01 -0.0668 0.115 0.315 PB L2
ENSG00000162510 MATN1 -12665 sc-eQTL 4.40e-01 0.0828 0.107 0.315 PB L2
ENSG00000162511 LAPTM5 -46854 sc-eQTL 8.19e-01 0.0175 0.0764 0.315 PB L2
ENSG00000162517 PEF1 -933976 sc-eQTL 8.43e-01 -0.0234 0.118 0.315 PB L2
ENSG00000186056 MATN1-AS1 -7584 sc-eQTL 2.07e-01 0.132 0.104 0.315 PB L2
ENSG00000287510 AL137857.1 -20773 sc-eQTL 2.54e-01 -0.127 0.111 0.315 PB L2
ENSG00000060688 SNRNP40 -585868 sc-eQTL 9.25e-02 -0.129 0.0763 0.304 Pro_T L2
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 4.12e-01 -0.0799 0.0973 0.304 Pro_T L2
ENSG00000134644 PUM1 -355071 sc-eQTL 6.32e-02 -0.168 0.0902 0.304 Pro_T L2
ENSG00000162511 LAPTM5 -46854 sc-eQTL 1.37e-01 0.0968 0.0649 0.304 Pro_T L2
ENSG00000162517 PEF1 -933976 sc-eQTL 3.12e-01 0.0969 0.0955 0.304 Pro_T L2
ENSG00000186056 MATN1-AS1 -7584 sc-eQTL 9.45e-01 0.00631 0.0912 0.304 Pro_T L2
ENSG00000287510 AL137857.1 -20773 sc-eQTL 2.78e-01 -0.0909 0.0836 0.304 Pro_T L2
ENSG00000060688 SNRNP40 -585868 sc-eQTL 8.51e-01 -0.0187 0.0994 0.308 Treg L2
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 9.49e-01 0.00611 0.0962 0.308 Treg L2
ENSG00000134644 PUM1 -355071 sc-eQTL 4.24e-01 0.0616 0.0768 0.308 Treg L2
ENSG00000162511 LAPTM5 -46854 sc-eQTL 7.91e-01 -0.0234 0.0881 0.308 Treg L2
ENSG00000162517 PEF1 -933976 sc-eQTL 8.66e-01 0.0161 0.0952 0.308 Treg L2
ENSG00000186056 MATN1-AS1 -7584 sc-eQTL 5.98e-02 0.168 0.089 0.308 Treg L2
ENSG00000287510 AL137857.1 -20773 sc-eQTL 1.33e-01 -0.135 0.0892 0.308 Treg L2
ENSG00000060688 SNRNP40 -585868 sc-eQTL 9.97e-02 -0.172 0.104 0.315 cDC L2
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 6.87e-01 0.0457 0.113 0.315 cDC L2
ENSG00000134644 PUM1 -355071 sc-eQTL 5.79e-02 0.184 0.0962 0.315 cDC L2
ENSG00000162511 LAPTM5 -46854 sc-eQTL 3.55e-01 -0.063 0.0679 0.315 cDC L2
ENSG00000162517 PEF1 -933976 sc-eQTL 8.19e-01 0.0225 0.0986 0.315 cDC L2
ENSG00000168528 SERINC2 -698645 sc-eQTL 4.75e-01 -0.0625 0.0873 0.315 cDC L2
ENSG00000284543 LINC01226 -795306 sc-eQTL 3.47e-01 0.0808 0.0857 0.315 cDC L2
ENSG00000287510 AL137857.1 -20773 sc-eQTL 3.03e-02 -0.199 0.0913 0.315 cDC L2
ENSG00000060688 SNRNP40 -585868 sc-eQTL 2.78e-01 -0.0881 0.081 0.308 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 3.04e-01 -0.0932 0.0904 0.308 cMono_IL1B L2
ENSG00000134644 PUM1 -355071 sc-eQTL 5.21e-01 0.0394 0.0613 0.308 cMono_IL1B L2
ENSG00000162511 LAPTM5 -46854 sc-eQTL 7.52e-01 -0.017 0.0538 0.308 cMono_IL1B L2
ENSG00000162512 SDC3 -197838 sc-eQTL 1.70e-01 -0.139 0.101 0.308 cMono_IL1B L2
ENSG00000162517 PEF1 -933976 sc-eQTL 6.89e-01 0.0332 0.0828 0.308 cMono_IL1B L2
ENSG00000168528 SERINC2 -698645 sc-eQTL 3.58e-01 -0.0944 0.102 0.308 cMono_IL1B L2
ENSG00000284543 LINC01226 -795306 sc-eQTL 2.13e-02 0.208 0.0896 0.308 cMono_IL1B L2
ENSG00000287510 AL137857.1 -20773 sc-eQTL 5.98e-01 0.0447 0.0846 0.308 cMono_IL1B L2
ENSG00000060688 SNRNP40 -585868 sc-eQTL 8.54e-01 0.0157 0.0855 0.308 cMono_S100A L2
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 3.59e-01 0.0926 0.101 0.308 cMono_S100A L2
ENSG00000134644 PUM1 -355071 sc-eQTL 1.90e-01 -0.0955 0.0727 0.308 cMono_S100A L2
ENSG00000162511 LAPTM5 -46854 sc-eQTL 9.38e-01 -0.00434 0.0561 0.308 cMono_S100A L2
ENSG00000162512 SDC3 -197838 sc-eQTL 3.97e-01 -0.0821 0.0968 0.308 cMono_S100A L2
ENSG00000162517 PEF1 -933976 sc-eQTL 2.65e-01 -0.0976 0.0873 0.308 cMono_S100A L2
ENSG00000168528 SERINC2 -698645 sc-eQTL 1.80e-01 -0.138 0.102 0.308 cMono_S100A L2
ENSG00000284543 LINC01226 -795306 sc-eQTL 1.46e-01 0.121 0.083 0.308 cMono_S100A L2
ENSG00000287510 AL137857.1 -20773 sc-eQTL 7.19e-01 0.0301 0.0837 0.308 cMono_S100A L2
ENSG00000060688 SNRNP40 -585868 sc-eQTL 6.47e-01 0.0613 0.134 0.297 gdT L2
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 4.77e-01 0.0816 0.115 0.297 gdT L2
ENSG00000134644 PUM1 -355071 sc-eQTL 5.02e-01 0.0794 0.118 0.297 gdT L2
ENSG00000162511 LAPTM5 -46854 sc-eQTL 7.12e-01 -0.0476 0.129 0.297 gdT L2
ENSG00000162517 PEF1 -933976 sc-eQTL 4.97e-01 0.08 0.117 0.297 gdT L2
ENSG00000186056 MATN1-AS1 -7584 sc-eQTL 7.44e-01 -0.0388 0.119 0.297 gdT L2
ENSG00000287510 AL137857.1 -20773 sc-eQTL 9.23e-01 -0.0111 0.115 0.297 gdT L2
ENSG00000060688 SNRNP40 -585868 sc-eQTL 9.24e-01 -0.00909 0.0951 0.313 intMono L2
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 1.87e-01 -0.135 0.102 0.313 intMono L2
ENSG00000134644 PUM1 -355071 sc-eQTL 3.29e-01 -0.0848 0.0865 0.313 intMono L2
ENSG00000162511 LAPTM5 -46854 sc-eQTL 1.23e-01 0.105 0.0677 0.313 intMono L2
ENSG00000162512 SDC3 -197838 sc-eQTL 6.95e-01 -0.0366 0.0932 0.313 intMono L2
ENSG00000162517 PEF1 -933976 sc-eQTL 1.17e-01 -0.153 0.0973 0.313 intMono L2
ENSG00000168528 SERINC2 -698645 sc-eQTL 4.80e-02 -0.192 0.0966 0.313 intMono L2
ENSG00000284543 LINC01226 -795306 sc-eQTL 5.19e-01 0.0596 0.0923 0.313 intMono L2
ENSG00000287510 AL137857.1 -20773 sc-eQTL 7.62e-01 0.0281 0.0924 0.313 intMono L2
ENSG00000060688 SNRNP40 -585868 sc-eQTL 2.66e-01 0.1 0.09 0.305 ncMono L2
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 1.24e-01 -0.148 0.0957 0.305 ncMono L2
ENSG00000134644 PUM1 -355071 sc-eQTL 2.63e-01 -0.088 0.0784 0.305 ncMono L2
ENSG00000162511 LAPTM5 -46854 sc-eQTL 2.73e-01 0.0784 0.0712 0.305 ncMono L2
ENSG00000162512 SDC3 -197838 sc-eQTL 1.89e-01 -0.105 0.0798 0.305 ncMono L2
ENSG00000162517 PEF1 -933976 sc-eQTL 1.53e-01 -0.131 0.0914 0.305 ncMono L2
ENSG00000168528 SERINC2 -698645 sc-eQTL 4.95e-01 -0.0597 0.0873 0.305 ncMono L2
ENSG00000284543 LINC01226 -795306 sc-eQTL 5.53e-01 -0.0519 0.0873 0.305 ncMono L2
ENSG00000287510 AL137857.1 -20773 sc-eQTL 8.81e-01 -0.0136 0.0906 0.305 ncMono L2
ENSG00000060688 SNRNP40 -585868 sc-eQTL 9.42e-01 -0.00737 0.102 0.302 pDC L2
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 5.69e-01 0.0637 0.112 0.302 pDC L2
ENSG00000134644 PUM1 -355071 sc-eQTL 7.26e-01 -0.0325 0.0927 0.302 pDC L2
ENSG00000162511 LAPTM5 -46854 sc-eQTL 3.49e-01 0.0808 0.086 0.302 pDC L2
ENSG00000162517 PEF1 -933976 sc-eQTL 2.61e-01 -0.126 0.111 0.302 pDC L2
ENSG00000168528 SERINC2 -698645 sc-eQTL 8.41e-01 0.021 0.105 0.302 pDC L2
ENSG00000284543 LINC01226 -795306 sc-eQTL 2.80e-01 0.0877 0.0809 0.302 pDC L2
ENSG00000287510 AL137857.1 -20773 sc-eQTL 9.61e-01 -0.00471 0.0955 0.302 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -585868 sc-eQTL 5.22e-01 0.0639 0.0997 0.308 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 9.05e-01 0.00994 0.0831 0.308 B_Memory LOneK1K
ENSG00000134644 PUM1 -355071 sc-eQTL 2.21e-01 0.0902 0.0734 0.308 B_Memory LOneK1K
ENSG00000162510 MATN1 -12665 sc-eQTL 5.07e-02 0.163 0.0832 0.308 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -46854 sc-eQTL 4.76e-01 0.0376 0.0527 0.308 B_Memory LOneK1K
ENSG00000162517 PEF1 -933976 sc-eQTL 8.21e-01 0.0198 0.0874 0.308 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -7584 sc-eQTL 9.68e-01 -0.00277 0.0698 0.308 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -20773 sc-eQTL 1.32e-01 -0.114 0.0756 0.308 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -585868 sc-eQTL 7.15e-02 -0.165 0.0911 0.308 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 1.17e-01 -0.113 0.0722 0.308 B_Naive LOneK1K
ENSG00000134644 PUM1 -355071 sc-eQTL 9.10e-01 -0.00777 0.0687 0.308 B_Naive LOneK1K
ENSG00000162510 MATN1 -12665 sc-eQTL 6.81e-01 -0.0272 0.0661 0.308 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -46854 sc-eQTL 3.92e-01 0.0398 0.0465 0.308 B_Naive LOneK1K
ENSG00000162517 PEF1 -933976 sc-eQTL 7.97e-01 -0.0218 0.085 0.308 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -7584 sc-eQTL 2.01e-01 -0.0767 0.0599 0.308 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -20773 sc-eQTL 6.49e-01 -0.0326 0.0714 0.308 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -585868 sc-eQTL 2.91e-01 -0.0817 0.0771 0.308 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 6.78e-01 -0.0364 0.0875 0.308 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -355071 sc-eQTL 6.90e-01 -0.0223 0.0558 0.308 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -46854 sc-eQTL 7.39e-01 -0.0164 0.0491 0.308 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -197838 sc-eQTL 1.36e-01 -0.149 0.0996 0.308 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -933976 sc-eQTL 8.59e-01 -0.0125 0.0704 0.308 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -698645 sc-eQTL 1.89e-01 -0.135 0.103 0.308 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -795306 sc-eQTL 1.42e-02 0.206 0.0833 0.308 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -20773 sc-eQTL 4.76e-01 0.0564 0.079 0.308 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -585868 sc-eQTL 2.04e-01 0.107 0.084 0.31 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 9.94e-02 -0.152 0.0916 0.31 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -355071 sc-eQTL 5.25e-01 -0.048 0.0755 0.31 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -46854 sc-eQTL 1.13e-01 0.0956 0.0601 0.31 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -197838 sc-eQTL 8.30e-01 -0.019 0.0883 0.31 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -933976 sc-eQTL 4.25e-02 -0.162 0.0794 0.31 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -698645 sc-eQTL 1.64e-01 -0.127 0.0911 0.31 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -795306 sc-eQTL 7.50e-01 0.0277 0.0869 0.31 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -20773 sc-eQTL 6.02e-01 0.0454 0.087 0.31 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -585868 sc-eQTL 6.71e-01 -0.04 0.094 0.31 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -586062 sc-eQTL 4.70e-01 -0.0464 0.0641 0.31 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -355071 sc-eQTL 6.80e-01 0.0291 0.0703 0.31 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -46854 sc-eQTL 2.34e-01 -0.0935 0.0784 0.31 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -933976 sc-eQTL 6.57e-01 -0.0265 0.0597 0.31 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -7584 sc-eQTL 1.86e-01 0.12 0.0903 0.31 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -20773 sc-eQTL 3.57e-01 -0.0722 0.0781 0.31 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162510 MATN1 -12665 eQTL 0.000166 0.0781 0.0206 0.0187 0.0166 0.318
ENSG00000162511 LAPTM5 -46854 eQTL 0.0353 -0.0223 0.0106 0.0 0.0 0.318
ENSG00000186056 MATN1-AS1 -7584 eQTL 3.86e-05 -0.0546 0.0132 0.0 0.0 0.318

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162510 MATN1 -12665 3.32e-05 2.95e-05 3.73e-06 1.29e-05 3.22e-06 1.15e-05 3.12e-05 3.37e-06 2.05e-05 1.12e-05 2.82e-05 9.95e-06 3.83e-05 9.51e-06 5.66e-06 1.14e-05 1.1e-05 1.75e-05 6.02e-06 4.69e-06 9.54e-06 2.28e-05 2.21e-05 5.76e-06 3.23e-05 5.58e-06 9.03e-06 8.34e-06 2.14e-05 1.77e-05 1.45e-05 1.17e-06 1.61e-06 4.07e-06 8.71e-06 4.49e-06 1.89e-06 2.72e-06 3.31e-06 2.6e-06 1.12e-06 2.87e-05 2.68e-06 2.36e-07 1.85e-06 2.74e-06 3.27e-06 1.29e-06 1.3e-06