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Genes within 1Mb (chr1:30709581:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -587207 sc-eQTL 4.03e-02 -0.154 0.0748 0.506 B L1
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 9.25e-02 -0.102 0.0601 0.506 B L1
ENSG00000134644 PUM1 -356410 sc-eQTL 4.37e-01 0.0395 0.0507 0.506 B L1
ENSG00000162510 MATN1 -14004 sc-eQTL 2.72e-01 0.0586 0.0532 0.506 B L1
ENSG00000162511 LAPTM5 -48193 sc-eQTL 2.63e-01 0.0468 0.0417 0.506 B L1
ENSG00000162517 PEF1 -935315 sc-eQTL 9.32e-01 0.00542 0.0631 0.506 B L1
ENSG00000186056 MATN1-AS1 -8923 sc-eQTL 5.70e-02 -0.0929 0.0486 0.506 B L1
ENSG00000287510 AL137857.1 -22112 sc-eQTL 2.27e-01 -0.0701 0.0578 0.506 B L1
ENSG00000060688 SNRNP40 -587207 sc-eQTL 8.26e-01 0.0145 0.0659 0.506 CD4T L1
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 7.37e-01 0.0173 0.0515 0.506 CD4T L1
ENSG00000134644 PUM1 -356410 sc-eQTL 2.48e-01 0.0529 0.0457 0.506 CD4T L1
ENSG00000162511 LAPTM5 -48193 sc-eQTL 3.28e-01 0.0497 0.0507 0.506 CD4T L1
ENSG00000162517 PEF1 -935315 sc-eQTL 9.79e-01 0.00139 0.0532 0.506 CD4T L1
ENSG00000186056 MATN1-AS1 -8923 sc-eQTL 9.01e-03 -0.118 0.0447 0.506 CD4T L1
ENSG00000287510 AL137857.1 -22112 sc-eQTL 7.78e-01 -0.0154 0.0545 0.506 CD4T L1
ENSG00000060688 SNRNP40 -587207 sc-eQTL 9.02e-01 -0.0108 0.0875 0.506 CD8T L1
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 8.60e-01 0.0103 0.0582 0.506 CD8T L1
ENSG00000134644 PUM1 -356410 sc-eQTL 9.65e-02 0.085 0.0509 0.506 CD8T L1
ENSG00000162511 LAPTM5 -48193 sc-eQTL 1.68e-03 0.155 0.0486 0.506 CD8T L1
ENSG00000162517 PEF1 -935315 sc-eQTL 6.70e-01 -0.0261 0.0613 0.506 CD8T L1
ENSG00000186056 MATN1-AS1 -8923 sc-eQTL 3.23e-02 -0.124 0.0577 0.506 CD8T L1
ENSG00000287510 AL137857.1 -22112 sc-eQTL 2.18e-01 0.0902 0.073 0.506 CD8T L1
ENSG00000060688 SNRNP40 -587207 sc-eQTL 2.76e-01 -0.0843 0.0772 0.502 DC L1
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 2.29e-01 0.11 0.0913 0.502 DC L1
ENSG00000134644 PUM1 -356410 sc-eQTL 6.61e-01 -0.0315 0.0718 0.502 DC L1
ENSG00000162511 LAPTM5 -48193 sc-eQTL 4.68e-01 -0.0372 0.0512 0.502 DC L1
ENSG00000162517 PEF1 -935315 sc-eQTL 7.72e-01 -0.0242 0.0831 0.502 DC L1
ENSG00000168528 SERINC2 -699984 sc-eQTL 4.86e-01 -0.0589 0.0844 0.502 DC L1
ENSG00000284543 LINC01226 -796645 sc-eQTL 3.52e-01 0.0521 0.0559 0.502 DC L1
ENSG00000287510 AL137857.1 -22112 sc-eQTL 2.23e-01 -0.0987 0.0808 0.502 DC L1
ENSG00000060688 SNRNP40 -587207 sc-eQTL 6.37e-01 -0.0281 0.0594 0.506 Mono L1
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 9.19e-01 -0.0075 0.0737 0.506 Mono L1
ENSG00000134644 PUM1 -356410 sc-eQTL 5.24e-01 -0.0302 0.0472 0.506 Mono L1
ENSG00000162511 LAPTM5 -48193 sc-eQTL 3.91e-01 0.0373 0.0434 0.506 Mono L1
ENSG00000162512 SDC3 -199177 sc-eQTL 7.86e-02 -0.147 0.0829 0.506 Mono L1
ENSG00000162517 PEF1 -935315 sc-eQTL 8.68e-01 -0.00978 0.0586 0.506 Mono L1
ENSG00000168528 SERINC2 -699984 sc-eQTL 6.10e-01 -0.0458 0.0896 0.506 Mono L1
ENSG00000284543 LINC01226 -796645 sc-eQTL 3.63e-01 0.0719 0.0788 0.506 Mono L1
ENSG00000287510 AL137857.1 -22112 sc-eQTL 1.15e-01 0.109 0.0686 0.506 Mono L1
ENSG00000060688 SNRNP40 -587207 sc-eQTL 3.40e-01 -0.0793 0.0829 0.509 NK L1
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 4.09e-01 -0.0469 0.0568 0.509 NK L1
ENSG00000134644 PUM1 -356410 sc-eQTL 5.11e-01 0.0392 0.0596 0.509 NK L1
ENSG00000162511 LAPTM5 -48193 sc-eQTL 6.34e-01 0.0327 0.0686 0.509 NK L1
ENSG00000162517 PEF1 -935315 sc-eQTL 3.24e-01 -0.0494 0.05 0.509 NK L1
ENSG00000186056 MATN1-AS1 -8923 sc-eQTL 2.94e-01 -0.0809 0.0769 0.509 NK L1
ENSG00000287510 AL137857.1 -22112 sc-eQTL 5.41e-01 0.0436 0.0712 0.509 NK L1
ENSG00000060688 SNRNP40 -587207 sc-eQTL 5.19e-01 -0.0405 0.0627 0.506 Other_T L1
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 8.66e-01 0.0113 0.0671 0.506 Other_T L1
ENSG00000134644 PUM1 -356410 sc-eQTL 9.06e-01 -0.00711 0.0603 0.506 Other_T L1
ENSG00000162511 LAPTM5 -48193 sc-eQTL 1.63e-01 0.0689 0.0492 0.506 Other_T L1
ENSG00000162517 PEF1 -935315 sc-eQTL 9.16e-02 0.111 0.0656 0.506 Other_T L1
ENSG00000186056 MATN1-AS1 -8923 sc-eQTL 5.04e-01 -0.0542 0.0809 0.506 Other_T L1
ENSG00000287510 AL137857.1 -22112 sc-eQTL 5.68e-01 0.0482 0.0843 0.506 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -587207 sc-eQTL 5.61e-01 -0.058 0.0997 0.505 B_Activated L2
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 8.10e-01 -0.0243 0.101 0.505 B_Activated L2
ENSG00000134644 PUM1 -356410 sc-eQTL 9.67e-01 -0.00389 0.0935 0.505 B_Activated L2
ENSG00000162510 MATN1 -14004 sc-eQTL 7.09e-01 -0.0305 0.0817 0.505 B_Activated L2
ENSG00000162511 LAPTM5 -48193 sc-eQTL 5.94e-01 -0.0304 0.057 0.505 B_Activated L2
ENSG00000162517 PEF1 -935315 sc-eQTL 6.88e-01 0.039 0.097 0.505 B_Activated L2
ENSG00000186056 MATN1-AS1 -8923 sc-eQTL 9.24e-01 -0.00882 0.092 0.505 B_Activated L2
ENSG00000287510 AL137857.1 -22112 sc-eQTL 2.44e-01 -0.0948 0.0811 0.505 B_Activated L2
ENSG00000060688 SNRNP40 -587207 sc-eQTL 6.59e-01 0.0412 0.0932 0.506 B_Intermediate L2
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 8.60e-01 -0.0137 0.0777 0.506 B_Intermediate L2
ENSG00000134644 PUM1 -356410 sc-eQTL 8.21e-01 -0.0166 0.0733 0.506 B_Intermediate L2
ENSG00000162510 MATN1 -14004 sc-eQTL 8.43e-02 0.131 0.0758 0.506 B_Intermediate L2
ENSG00000162511 LAPTM5 -48193 sc-eQTL 3.02e-01 0.0483 0.0467 0.506 B_Intermediate L2
ENSG00000162517 PEF1 -935315 sc-eQTL 4.30e-01 0.0687 0.0869 0.506 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -8923 sc-eQTL 6.06e-01 -0.0339 0.0657 0.506 B_Intermediate L2
ENSG00000287510 AL137857.1 -22112 sc-eQTL 2.15e-02 -0.168 0.0726 0.506 B_Intermediate L2
ENSG00000060688 SNRNP40 -587207 sc-eQTL 2.29e-01 -0.109 0.0903 0.506 B_Memory L2
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 3.78e-01 0.0736 0.0833 0.506 B_Memory L2
ENSG00000134644 PUM1 -356410 sc-eQTL 3.92e-01 0.0622 0.0726 0.506 B_Memory L2
ENSG00000162510 MATN1 -14004 sc-eQTL 2.34e-01 0.0827 0.0693 0.506 B_Memory L2
ENSG00000162511 LAPTM5 -48193 sc-eQTL 4.58e-01 0.0458 0.0616 0.506 B_Memory L2
ENSG00000162517 PEF1 -935315 sc-eQTL 9.61e-01 0.00402 0.0823 0.506 B_Memory L2
ENSG00000186056 MATN1-AS1 -8923 sc-eQTL 4.89e-01 -0.0488 0.0704 0.506 B_Memory L2
ENSG00000287510 AL137857.1 -22112 sc-eQTL 7.51e-02 0.147 0.082 0.506 B_Memory L2
ENSG00000060688 SNRNP40 -587207 sc-eQTL 3.29e-01 -0.0811 0.0829 0.506 B_Naive1 L2
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 6.07e-02 -0.134 0.0711 0.506 B_Naive1 L2
ENSG00000134644 PUM1 -356410 sc-eQTL 7.82e-01 0.0175 0.0632 0.506 B_Naive1 L2
ENSG00000162510 MATN1 -14004 sc-eQTL 2.50e-01 0.0738 0.064 0.506 B_Naive1 L2
ENSG00000162511 LAPTM5 -48193 sc-eQTL 2.14e-01 0.0533 0.0427 0.506 B_Naive1 L2
ENSG00000162517 PEF1 -935315 sc-eQTL 1.37e-01 0.112 0.0752 0.506 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -8923 sc-eQTL 1.17e-01 -0.0882 0.056 0.506 B_Naive1 L2
ENSG00000287510 AL137857.1 -22112 sc-eQTL 8.14e-01 0.0164 0.0695 0.506 B_Naive1 L2
ENSG00000060688 SNRNP40 -587207 sc-eQTL 1.89e-03 -0.273 0.0868 0.506 B_Naive2 L2
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 7.24e-02 -0.131 0.0728 0.506 B_Naive2 L2
ENSG00000134644 PUM1 -356410 sc-eQTL 4.22e-01 0.0576 0.0717 0.506 B_Naive2 L2
ENSG00000162510 MATN1 -14004 sc-eQTL 8.60e-01 -0.0121 0.0689 0.506 B_Naive2 L2
ENSG00000162511 LAPTM5 -48193 sc-eQTL 7.62e-02 0.0827 0.0464 0.506 B_Naive2 L2
ENSG00000162517 PEF1 -935315 sc-eQTL 2.27e-02 -0.193 0.0841 0.506 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -8923 sc-eQTL 3.99e-03 -0.194 0.0668 0.506 B_Naive2 L2
ENSG00000287510 AL137857.1 -22112 sc-eQTL 4.16e-01 -0.0599 0.0735 0.506 B_Naive2 L2
ENSG00000060688 SNRNP40 -587207 sc-eQTL 6.41e-01 0.0418 0.0894 0.502 CD4_CTL L2
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 5.82e-01 0.0485 0.0879 0.502 CD4_CTL L2
ENSG00000134644 PUM1 -356410 sc-eQTL 6.35e-01 -0.041 0.0862 0.502 CD4_CTL L2
ENSG00000162511 LAPTM5 -48193 sc-eQTL 1.58e-01 0.108 0.0765 0.502 CD4_CTL L2
ENSG00000162517 PEF1 -935315 sc-eQTL 4.23e-01 0.0632 0.0787 0.502 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -8923 sc-eQTL 8.22e-01 0.019 0.0841 0.502 CD4_CTL L2
ENSG00000287510 AL137857.1 -22112 sc-eQTL 2.78e-01 0.0805 0.074 0.502 CD4_CTL L2
ENSG00000060688 SNRNP40 -587207 sc-eQTL 5.05e-01 -0.0461 0.0691 0.506 CD4_Naive L2
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 5.01e-01 -0.0413 0.0612 0.506 CD4_Naive L2
ENSG00000134644 PUM1 -356410 sc-eQTL 1.22e-01 0.0756 0.0487 0.506 CD4_Naive L2
ENSG00000162511 LAPTM5 -48193 sc-eQTL 7.57e-01 0.0162 0.0524 0.506 CD4_Naive L2
ENSG00000162517 PEF1 -935315 sc-eQTL 5.28e-01 -0.0363 0.0575 0.506 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -8923 sc-eQTL 3.58e-03 -0.154 0.0522 0.506 CD4_Naive L2
ENSG00000287510 AL137857.1 -22112 sc-eQTL 7.18e-01 -0.0221 0.0611 0.506 CD4_Naive L2
ENSG00000060688 SNRNP40 -587207 sc-eQTL 3.62e-01 0.079 0.0865 0.506 CD4_TCM L2
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 6.50e-01 0.0317 0.0698 0.506 CD4_TCM L2
ENSG00000134644 PUM1 -356410 sc-eQTL 3.69e-01 0.0556 0.0617 0.506 CD4_TCM L2
ENSG00000162511 LAPTM5 -48193 sc-eQTL 2.13e-02 0.117 0.0506 0.506 CD4_TCM L2
ENSG00000162517 PEF1 -935315 sc-eQTL 8.86e-01 -0.00983 0.0687 0.506 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -8923 sc-eQTL 8.56e-02 -0.112 0.0646 0.506 CD4_TCM L2
ENSG00000287510 AL137857.1 -22112 sc-eQTL 3.49e-01 -0.0679 0.0723 0.506 CD4_TCM L2
ENSG00000060688 SNRNP40 -587207 sc-eQTL 9.99e-01 0.000138 0.0863 0.506 CD4_TEM L2
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 9.54e-02 0.137 0.0817 0.506 CD4_TEM L2
ENSG00000134644 PUM1 -356410 sc-eQTL 9.83e-01 -0.00146 0.0685 0.506 CD4_TEM L2
ENSG00000162511 LAPTM5 -48193 sc-eQTL 4.94e-01 0.0474 0.0692 0.506 CD4_TEM L2
ENSG00000162517 PEF1 -935315 sc-eQTL 4.28e-01 0.0615 0.0775 0.506 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -8923 sc-eQTL 3.90e-01 -0.0696 0.0809 0.506 CD4_TEM L2
ENSG00000287510 AL137857.1 -22112 sc-eQTL 1.66e-01 0.11 0.0795 0.506 CD4_TEM L2
ENSG00000060688 SNRNP40 -587207 sc-eQTL 7.65e-01 0.0285 0.0954 0.506 CD8_CTL L2
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 9.55e-01 -0.00418 0.0732 0.506 CD8_CTL L2
ENSG00000134644 PUM1 -356410 sc-eQTL 2.16e-01 0.0879 0.0708 0.506 CD8_CTL L2
ENSG00000162511 LAPTM5 -48193 sc-eQTL 2.47e-01 0.0911 0.0785 0.506 CD8_CTL L2
ENSG00000162517 PEF1 -935315 sc-eQTL 1.27e-01 0.104 0.0682 0.506 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -8923 sc-eQTL 5.05e-03 -0.23 0.0812 0.506 CD8_CTL L2
ENSG00000287510 AL137857.1 -22112 sc-eQTL 4.45e-01 0.0595 0.0777 0.506 CD8_CTL L2
ENSG00000060688 SNRNP40 -587207 sc-eQTL 2.26e-01 -0.103 0.0851 0.506 CD8_Naive L2
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 6.26e-01 0.0359 0.0736 0.506 CD8_Naive L2
ENSG00000134644 PUM1 -356410 sc-eQTL 7.38e-01 -0.0198 0.0593 0.506 CD8_Naive L2
ENSG00000162511 LAPTM5 -48193 sc-eQTL 6.25e-03 0.154 0.0558 0.506 CD8_Naive L2
ENSG00000162517 PEF1 -935315 sc-eQTL 5.83e-02 -0.149 0.0783 0.506 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -8923 sc-eQTL 7.58e-02 -0.126 0.0704 0.506 CD8_Naive L2
ENSG00000287510 AL137857.1 -22112 sc-eQTL 3.30e-01 0.0752 0.077 0.506 CD8_Naive L2
ENSG00000060688 SNRNP40 -587207 sc-eQTL 1.71e-01 0.129 0.0942 0.5 CD8_TCM L2
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 5.14e-01 -0.0567 0.0867 0.5 CD8_TCM L2
ENSG00000134644 PUM1 -356410 sc-eQTL 6.43e-01 0.0379 0.0815 0.5 CD8_TCM L2
ENSG00000162511 LAPTM5 -48193 sc-eQTL 6.83e-01 0.0349 0.0854 0.5 CD8_TCM L2
ENSG00000162517 PEF1 -935315 sc-eQTL 2.52e-01 -0.1 0.087 0.5 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -8923 sc-eQTL 9.78e-01 -0.00223 0.0791 0.5 CD8_TCM L2
ENSG00000287510 AL137857.1 -22112 sc-eQTL 3.71e-01 0.0715 0.0797 0.5 CD8_TCM L2
ENSG00000060688 SNRNP40 -587207 sc-eQTL 4.61e-01 -0.0669 0.0907 0.505 CD8_TEM L2
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 9.54e-01 0.00498 0.0871 0.505 CD8_TEM L2
ENSG00000134644 PUM1 -356410 sc-eQTL 7.64e-01 0.0267 0.089 0.505 CD8_TEM L2
ENSG00000162511 LAPTM5 -48193 sc-eQTL 3.17e-01 0.0837 0.0835 0.505 CD8_TEM L2
ENSG00000162517 PEF1 -935315 sc-eQTL 5.72e-01 -0.0446 0.0787 0.505 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -8923 sc-eQTL 1.60e-01 -0.122 0.0864 0.505 CD8_TEM L2
ENSG00000287510 AL137857.1 -22112 sc-eQTL 3.74e-02 -0.163 0.0777 0.505 CD8_TEM L2
ENSG00000060688 SNRNP40 -587207 sc-eQTL 4.95e-01 -0.0629 0.092 0.504 MAIT L2
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 5.29e-01 0.0515 0.0816 0.504 MAIT L2
ENSG00000134644 PUM1 -356410 sc-eQTL 8.60e-01 0.0138 0.0783 0.504 MAIT L2
ENSG00000162511 LAPTM5 -48193 sc-eQTL 7.45e-01 0.024 0.0738 0.504 MAIT L2
ENSG00000162517 PEF1 -935315 sc-eQTL 7.50e-01 0.0259 0.0811 0.504 MAIT L2
ENSG00000186056 MATN1-AS1 -8923 sc-eQTL 9.59e-01 -0.00427 0.0822 0.504 MAIT L2
ENSG00000287510 AL137857.1 -22112 sc-eQTL 8.60e-01 -0.015 0.0847 0.504 MAIT L2
ENSG00000060688 SNRNP40 -587207 sc-eQTL 8.67e-01 0.0154 0.0916 0.507 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 3.01e-01 -0.0801 0.0772 0.507 NK_CD56bright L2
ENSG00000134644 PUM1 -356410 sc-eQTL 7.46e-01 -0.0264 0.0813 0.507 NK_CD56bright L2
ENSG00000162511 LAPTM5 -48193 sc-eQTL 9.65e-01 0.00357 0.0802 0.507 NK_CD56bright L2
ENSG00000162517 PEF1 -935315 sc-eQTL 8.76e-01 -0.0122 0.0779 0.507 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -8923 sc-eQTL 6.02e-01 -0.042 0.0806 0.507 NK_CD56bright L2
ENSG00000287510 AL137857.1 -22112 sc-eQTL 3.85e-01 -0.069 0.0793 0.507 NK_CD56bright L2
ENSG00000060688 SNRNP40 -587207 sc-eQTL 3.89e-01 -0.0756 0.0876 0.509 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 9.37e-01 -0.00515 0.0649 0.509 NK_CD56dim L2
ENSG00000134644 PUM1 -356410 sc-eQTL 7.17e-01 0.0242 0.0666 0.509 NK_CD56dim L2
ENSG00000162511 LAPTM5 -48193 sc-eQTL 4.57e-01 0.0529 0.0709 0.509 NK_CD56dim L2
ENSG00000162517 PEF1 -935315 sc-eQTL 6.45e-01 -0.0291 0.0632 0.509 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -8923 sc-eQTL 4.22e-01 -0.0715 0.0889 0.509 NK_CD56dim L2
ENSG00000287510 AL137857.1 -22112 sc-eQTL 2.54e-01 0.0837 0.0732 0.509 NK_CD56dim L2
ENSG00000060688 SNRNP40 -587207 sc-eQTL 9.03e-01 -0.0112 0.092 0.511 NK_HLA L2
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 9.14e-01 -0.00884 0.0822 0.511 NK_HLA L2
ENSG00000134644 PUM1 -356410 sc-eQTL 4.74e-01 0.0573 0.08 0.511 NK_HLA L2
ENSG00000162511 LAPTM5 -48193 sc-eQTL 7.04e-02 0.138 0.0758 0.511 NK_HLA L2
ENSG00000162517 PEF1 -935315 sc-eQTL 1.31e-01 -0.13 0.0856 0.511 NK_HLA L2
ENSG00000186056 MATN1-AS1 -8923 sc-eQTL 5.15e-01 0.053 0.0812 0.511 NK_HLA L2
ENSG00000287510 AL137857.1 -22112 sc-eQTL 8.98e-01 0.0101 0.0786 0.511 NK_HLA L2
ENSG00000060688 SNRNP40 -587207 sc-eQTL 5.01e-01 -0.0575 0.0853 0.509 NK_cytokine L2
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 4.58e-01 0.0496 0.0666 0.509 NK_cytokine L2
ENSG00000134644 PUM1 -356410 sc-eQTL 5.28e-01 0.0455 0.072 0.509 NK_cytokine L2
ENSG00000162511 LAPTM5 -48193 sc-eQTL 4.68e-01 0.0577 0.0793 0.509 NK_cytokine L2
ENSG00000162517 PEF1 -935315 sc-eQTL 8.82e-01 0.01 0.0676 0.509 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -8923 sc-eQTL 7.33e-01 -0.0288 0.0841 0.509 NK_cytokine L2
ENSG00000287510 AL137857.1 -22112 sc-eQTL 5.73e-01 -0.0442 0.0782 0.509 NK_cytokine L2
ENSG00000060688 SNRNP40 -587207 sc-eQTL 5.78e-02 -0.199 0.104 0.515 PB L2
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 7.25e-01 0.0432 0.123 0.515 PB L2
ENSG00000134644 PUM1 -356410 sc-eQTL 4.92e-01 0.0733 0.106 0.515 PB L2
ENSG00000162510 MATN1 -14004 sc-eQTL 6.40e-01 0.0465 0.0992 0.515 PB L2
ENSG00000162511 LAPTM5 -48193 sc-eQTL 9.97e-01 0.000285 0.0709 0.515 PB L2
ENSG00000162517 PEF1 -935315 sc-eQTL 4.52e-01 0.0822 0.109 0.515 PB L2
ENSG00000186056 MATN1-AS1 -8923 sc-eQTL 5.39e-01 0.0597 0.0969 0.515 PB L2
ENSG00000287510 AL137857.1 -22112 sc-eQTL 4.65e-01 -0.0757 0.103 0.515 PB L2
ENSG00000060688 SNRNP40 -587207 sc-eQTL 3.39e-01 -0.0645 0.0674 0.502 Pro_T L2
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 2.96e-01 -0.0896 0.0855 0.502 Pro_T L2
ENSG00000134644 PUM1 -356410 sc-eQTL 8.71e-01 0.013 0.08 0.502 Pro_T L2
ENSG00000162511 LAPTM5 -48193 sc-eQTL 1.71e-02 0.136 0.0566 0.502 Pro_T L2
ENSG00000162517 PEF1 -935315 sc-eQTL 7.06e-01 0.0318 0.0841 0.502 Pro_T L2
ENSG00000186056 MATN1-AS1 -8923 sc-eQTL 8.84e-01 0.0117 0.0802 0.502 Pro_T L2
ENSG00000287510 AL137857.1 -22112 sc-eQTL 8.52e-01 0.0138 0.0737 0.502 Pro_T L2
ENSG00000060688 SNRNP40 -587207 sc-eQTL 5.59e-01 0.0519 0.0887 0.506 Treg L2
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 1.16e-01 0.135 0.0854 0.506 Treg L2
ENSG00000134644 PUM1 -356410 sc-eQTL 7.12e-01 0.0254 0.0687 0.506 Treg L2
ENSG00000162511 LAPTM5 -48193 sc-eQTL 5.76e-01 0.044 0.0786 0.506 Treg L2
ENSG00000162517 PEF1 -935315 sc-eQTL 6.50e-02 -0.156 0.0843 0.506 Treg L2
ENSG00000186056 MATN1-AS1 -8923 sc-eQTL 7.37e-01 0.027 0.0801 0.506 Treg L2
ENSG00000287510 AL137857.1 -22112 sc-eQTL 3.02e-01 -0.0826 0.0799 0.506 Treg L2
ENSG00000060688 SNRNP40 -587207 sc-eQTL 1.98e-01 -0.117 0.0905 0.505 cDC L2
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 6.41e-01 -0.0459 0.0984 0.505 cDC L2
ENSG00000134644 PUM1 -356410 sc-eQTL 2.58e-01 0.0956 0.0842 0.505 cDC L2
ENSG00000162511 LAPTM5 -48193 sc-eQTL 5.90e-01 -0.032 0.0592 0.505 cDC L2
ENSG00000162517 PEF1 -935315 sc-eQTL 8.90e-01 0.0118 0.0858 0.505 cDC L2
ENSG00000168528 SERINC2 -699984 sc-eQTL 8.25e-01 -0.0168 0.0761 0.505 cDC L2
ENSG00000284543 LINC01226 -796645 sc-eQTL 9.66e-01 0.00323 0.0748 0.505 cDC L2
ENSG00000287510 AL137857.1 -22112 sc-eQTL 2.35e-01 -0.0955 0.0802 0.505 cDC L2
ENSG00000060688 SNRNP40 -587207 sc-eQTL 4.51e-02 -0.144 0.0714 0.506 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 8.72e-01 -0.0129 0.0804 0.506 cMono_IL1B L2
ENSG00000134644 PUM1 -356410 sc-eQTL 5.44e-01 -0.033 0.0544 0.506 cMono_IL1B L2
ENSG00000162511 LAPTM5 -48193 sc-eQTL 6.61e-01 0.0209 0.0477 0.506 cMono_IL1B L2
ENSG00000162512 SDC3 -199177 sc-eQTL 6.29e-01 -0.0435 0.0899 0.506 cMono_IL1B L2
ENSG00000162517 PEF1 -935315 sc-eQTL 6.65e-01 0.0319 0.0735 0.506 cMono_IL1B L2
ENSG00000168528 SERINC2 -699984 sc-eQTL 8.37e-01 -0.0188 0.091 0.506 cMono_IL1B L2
ENSG00000284543 LINC01226 -796645 sc-eQTL 4.65e-01 0.0588 0.0804 0.506 cMono_IL1B L2
ENSG00000287510 AL137857.1 -22112 sc-eQTL 4.64e-02 0.149 0.0744 0.506 cMono_IL1B L2
ENSG00000060688 SNRNP40 -587207 sc-eQTL 9.92e-01 -0.000792 0.0754 0.506 cMono_S100A L2
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 8.85e-01 0.0129 0.0891 0.506 cMono_S100A L2
ENSG00000134644 PUM1 -356410 sc-eQTL 5.55e-01 -0.038 0.0643 0.506 cMono_S100A L2
ENSG00000162511 LAPTM5 -48193 sc-eQTL 6.76e-01 -0.0207 0.0495 0.506 cMono_S100A L2
ENSG00000162512 SDC3 -199177 sc-eQTL 7.74e-02 -0.151 0.0848 0.506 cMono_S100A L2
ENSG00000162517 PEF1 -935315 sc-eQTL 6.30e-01 -0.0372 0.0771 0.506 cMono_S100A L2
ENSG00000168528 SERINC2 -699984 sc-eQTL 2.97e-01 -0.0944 0.0903 0.506 cMono_S100A L2
ENSG00000284543 LINC01226 -796645 sc-eQTL 6.01e-01 0.0385 0.0735 0.506 cMono_S100A L2
ENSG00000287510 AL137857.1 -22112 sc-eQTL 6.71e-01 0.0313 0.0738 0.506 cMono_S100A L2
ENSG00000060688 SNRNP40 -587207 sc-eQTL 8.72e-01 0.0182 0.112 0.491 gdT L2
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 4.07e-01 0.08 0.0961 0.491 gdT L2
ENSG00000134644 PUM1 -356410 sc-eQTL 8.17e-01 0.023 0.0993 0.491 gdT L2
ENSG00000162511 LAPTM5 -48193 sc-eQTL 5.92e-01 0.058 0.108 0.491 gdT L2
ENSG00000162517 PEF1 -935315 sc-eQTL 3.69e-01 0.0889 0.0985 0.491 gdT L2
ENSG00000186056 MATN1-AS1 -8923 sc-eQTL 2.06e-01 -0.126 0.0991 0.491 gdT L2
ENSG00000287510 AL137857.1 -22112 sc-eQTL 8.80e-01 -0.0146 0.0965 0.491 gdT L2
ENSG00000060688 SNRNP40 -587207 sc-eQTL 6.02e-01 -0.0444 0.085 0.504 intMono L2
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 9.40e-01 0.0069 0.0915 0.504 intMono L2
ENSG00000134644 PUM1 -356410 sc-eQTL 4.47e-02 -0.155 0.0768 0.504 intMono L2
ENSG00000162511 LAPTM5 -48193 sc-eQTL 7.66e-03 0.161 0.0598 0.504 intMono L2
ENSG00000162512 SDC3 -199177 sc-eQTL 1.97e-01 -0.107 0.083 0.504 intMono L2
ENSG00000162517 PEF1 -935315 sc-eQTL 5.53e-01 -0.052 0.0875 0.504 intMono L2
ENSG00000168528 SERINC2 -699984 sc-eQTL 8.85e-01 0.0126 0.0873 0.504 intMono L2
ENSG00000284543 LINC01226 -796645 sc-eQTL 1.26e-01 0.126 0.0822 0.504 intMono L2
ENSG00000287510 AL137857.1 -22112 sc-eQTL 7.97e-01 -0.0213 0.0827 0.504 intMono L2
ENSG00000060688 SNRNP40 -587207 sc-eQTL 1.22e-01 0.124 0.0799 0.495 ncMono L2
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 4.26e-01 -0.0683 0.0856 0.495 ncMono L2
ENSG00000134644 PUM1 -356410 sc-eQTL 2.87e-01 -0.0746 0.0699 0.495 ncMono L2
ENSG00000162511 LAPTM5 -48193 sc-eQTL 6.34e-01 0.0303 0.0636 0.495 ncMono L2
ENSG00000162512 SDC3 -199177 sc-eQTL 5.56e-01 -0.042 0.0713 0.495 ncMono L2
ENSG00000162517 PEF1 -935315 sc-eQTL 3.70e-02 -0.17 0.0809 0.495 ncMono L2
ENSG00000168528 SERINC2 -699984 sc-eQTL 8.95e-01 0.0103 0.0779 0.495 ncMono L2
ENSG00000284543 LINC01226 -796645 sc-eQTL 3.26e-01 -0.0764 0.0776 0.495 ncMono L2
ENSG00000287510 AL137857.1 -22112 sc-eQTL 7.28e-01 0.0281 0.0806 0.495 ncMono L2
ENSG00000060688 SNRNP40 -587207 sc-eQTL 5.13e-01 -0.0572 0.0872 0.489 pDC L2
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 6.12e-02 0.179 0.0948 0.489 pDC L2
ENSG00000134644 PUM1 -356410 sc-eQTL 5.10e-02 -0.154 0.0785 0.489 pDC L2
ENSG00000162511 LAPTM5 -48193 sc-eQTL 8.89e-01 -0.0104 0.0739 0.489 pDC L2
ENSG00000162517 PEF1 -935315 sc-eQTL 5.36e-01 -0.0594 0.0958 0.489 pDC L2
ENSG00000168528 SERINC2 -699984 sc-eQTL 8.86e-01 -0.0129 0.0896 0.489 pDC L2
ENSG00000284543 LINC01226 -796645 sc-eQTL 2.76e-01 0.0757 0.0693 0.489 pDC L2
ENSG00000287510 AL137857.1 -22112 sc-eQTL 9.12e-01 0.00907 0.0818 0.489 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -587207 sc-eQTL 4.21e-01 -0.0718 0.0891 0.506 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 5.61e-01 0.0432 0.0742 0.506 B_Memory LOneK1K
ENSG00000134644 PUM1 -356410 sc-eQTL 3.58e-01 0.0605 0.0657 0.506 B_Memory LOneK1K
ENSG00000162510 MATN1 -14004 sc-eQTL 4.63e-02 0.149 0.0743 0.506 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -48193 sc-eQTL 5.69e-01 0.0269 0.0471 0.506 B_Memory LOneK1K
ENSG00000162517 PEF1 -935315 sc-eQTL 2.31e-01 0.0936 0.0778 0.506 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -8923 sc-eQTL 2.82e-01 -0.0671 0.0622 0.506 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -22112 sc-eQTL 1.51e-01 -0.0975 0.0676 0.506 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -587207 sc-eQTL 1.54e-02 -0.195 0.0797 0.506 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 2.89e-02 -0.139 0.0631 0.506 B_Naive LOneK1K
ENSG00000134644 PUM1 -356410 sc-eQTL 7.00e-01 0.0233 0.0604 0.506 B_Naive LOneK1K
ENSG00000162510 MATN1 -14004 sc-eQTL 4.88e-01 0.0404 0.0581 0.506 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -48193 sc-eQTL 1.05e-01 0.0663 0.0407 0.506 B_Naive LOneK1K
ENSG00000162517 PEF1 -935315 sc-eQTL 6.69e-01 0.032 0.0747 0.506 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -8923 sc-eQTL 5.82e-02 -0.0999 0.0524 0.506 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -22112 sc-eQTL 9.01e-01 0.0078 0.0628 0.506 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -587207 sc-eQTL 1.29e-01 -0.104 0.068 0.506 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 8.54e-01 -0.0143 0.0775 0.506 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -356410 sc-eQTL 4.74e-01 -0.0354 0.0494 0.506 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -48193 sc-eQTL 9.52e-01 0.00264 0.0434 0.506 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -199177 sc-eQTL 1.83e-01 -0.118 0.0882 0.506 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -935315 sc-eQTL 6.34e-01 0.0297 0.0623 0.506 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -699984 sc-eQTL 5.66e-01 -0.0524 0.0911 0.506 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -796645 sc-eQTL 6.04e-01 0.0388 0.0747 0.506 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -22112 sc-eQTL 1.04e-01 0.114 0.0695 0.506 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -587207 sc-eQTL 1.45e-01 0.11 0.075 0.509 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 7.78e-01 0.0233 0.0825 0.509 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -356410 sc-eQTL 1.89e-01 -0.0887 0.0673 0.509 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -48193 sc-eQTL 4.49e-02 0.108 0.0536 0.509 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -199177 sc-eQTL 3.22e-01 -0.0783 0.0788 0.509 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -935315 sc-eQTL 5.92e-02 -0.135 0.0712 0.509 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -699984 sc-eQTL 7.45e-01 0.0267 0.0819 0.509 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -796645 sc-eQTL 5.88e-01 0.0422 0.0777 0.509 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -22112 sc-eQTL 6.74e-01 0.0328 0.0778 0.509 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -587207 sc-eQTL 3.38e-01 -0.0802 0.0835 0.509 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -587401 sc-eQTL 8.49e-01 -0.0109 0.0572 0.509 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -356410 sc-eQTL 4.18e-01 0.0507 0.0625 0.509 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -48193 sc-eQTL 4.71e-01 0.0505 0.0699 0.509 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -935315 sc-eQTL 5.83e-01 -0.0292 0.0531 0.509 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -8923 sc-eQTL 2.64e-01 -0.0902 0.0805 0.509 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -22112 sc-eQTL 5.62e-01 0.0404 0.0696 0.509 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162511 LAPTM5 -48193 eQTL 8.4e-06 0.0432 0.00963 0.0 0.0 0.484
ENSG00000162512 SDC3 -199177 eQTL 0.0137 -0.0591 0.0239 0.0 0.0 0.484
ENSG00000186056 MATN1-AS1 -8923 eQTL 8.89e-10 -0.0744 0.012 0.495 0.349 0.484

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162510 \N -14004 8.92e-05 1.87e-05 3.05e-06 1.21e-05 3.32e-06 1.79e-05 2.75e-05 3.34e-06 1.73e-05 9.13e-06 2.23e-05 8.71e-06 3.19e-05 6.95e-06 5.38e-06 1.29e-05 1.02e-05 2.44e-05 4.15e-06 4.32e-06 9.17e-06 2.31e-05 2.15e-05 5.06e-06 3.04e-05 5.78e-06 8.97e-06 7.57e-06 1.82e-05 1.83e-05 1.15e-05 1.18e-06 1.44e-06 4.39e-06 8.5e-06 3.17e-06 1.71e-06 2.41e-06 2.94e-06 2.38e-06 1.55e-06 2.87e-05 4.47e-06 1.67e-07 1.92e-06 2.35e-06 3.33e-06 6.58e-07 5.35e-07
ENSG00000162511 LAPTM5 -48193 6.14e-05 9.78e-06 1.37e-06 5.03e-06 2.19e-06 7.63e-06 1.13e-05 1.75e-06 7.77e-06 4.74e-06 1.19e-05 4.9e-06 1.39e-05 3.95e-06 2.23e-06 6.69e-06 4.12e-06 1.12e-05 2.11e-06 2.59e-06 4.8e-06 1.02e-05 8.08e-06 2.22e-06 1.52e-05 3.73e-06 6.39e-06 2.73e-06 8.33e-06 8.06e-06 4.51e-06 5.83e-07 7.77e-07 2.77e-06 4.23e-06 1.35e-06 1.07e-06 6.8e-07 1.38e-06 1.01e-06 7.81e-07 1.39e-05 2.66e-06 1.81e-07 7.89e-07 1.07e-06 1.25e-06 6.45e-07 5.73e-07
ENSG00000186056 MATN1-AS1 -8923 7.61e-05 2.41e-05 4.32e-06 1.42e-05 4.7e-06 1.86e-05 3.58e-05 3.78e-06 2.29e-05 1.2e-05 2.99e-05 1.25e-05 3.88e-05 9.51e-06 6.2e-06 1.64e-05 1.4e-05 2.89e-05 5.69e-06 5.45e-06 1.24e-05 2.86e-05 2.67e-05 7.06e-06 3.73e-05 7.23e-06 1.18e-05 9.13e-06 2.43e-05 2.28e-05 1.44e-05 1.65e-06 2.21e-06 5.89e-06 1.03e-05 4.43e-06 2.42e-06 2.81e-06 3.71e-06 3.08e-06 1.73e-06 3.42e-05 4.68e-06 1.96e-07 2.27e-06 2.7e-06 3.97e-06 1.26e-06 1.08e-06