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Genes within 1Mb (chr1:30705000:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -591788 sc-eQTL 4.48e-01 -0.0576 0.0757 0.494 B L1
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 3.58e-01 -0.0558 0.0606 0.494 B L1
ENSG00000134644 PUM1 -360991 sc-eQTL 9.31e-01 0.00444 0.0509 0.494 B L1
ENSG00000162510 MATN1 -18585 sc-eQTL 3.86e-03 -0.153 0.0525 0.494 B L1
ENSG00000162511 LAPTM5 -52774 sc-eQTL 2.38e-01 0.0495 0.0418 0.494 B L1
ENSG00000162517 PEF1 -939896 sc-eQTL 6.33e-01 0.0303 0.0633 0.494 B L1
ENSG00000186056 MATN1-AS1 -13504 sc-eQTL 6.35e-01 -0.0233 0.0491 0.494 B L1
ENSG00000287510 AL137857.1 -26693 sc-eQTL 8.07e-01 0.0142 0.0581 0.494 B L1
ENSG00000060688 SNRNP40 -591788 sc-eQTL 4.29e-01 0.0513 0.0647 0.494 CD4T L1
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 8.46e-01 0.00983 0.0506 0.494 CD4T L1
ENSG00000134644 PUM1 -360991 sc-eQTL 4.18e-01 -0.0365 0.045 0.494 CD4T L1
ENSG00000162511 LAPTM5 -52774 sc-eQTL 6.73e-01 0.0211 0.0499 0.494 CD4T L1
ENSG00000162517 PEF1 -939896 sc-eQTL 9.15e-01 -0.00557 0.0522 0.494 CD4T L1
ENSG00000186056 MATN1-AS1 -13504 sc-eQTL 5.78e-01 0.0249 0.0446 0.494 CD4T L1
ENSG00000287510 AL137857.1 -26693 sc-eQTL 5.20e-01 -0.0344 0.0534 0.494 CD4T L1
ENSG00000060688 SNRNP40 -591788 sc-eQTL 5.60e-01 0.0497 0.0852 0.494 CD8T L1
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 4.11e-01 -0.0467 0.0566 0.494 CD8T L1
ENSG00000134644 PUM1 -360991 sc-eQTL 6.62e-01 -0.0218 0.0499 0.494 CD8T L1
ENSG00000162511 LAPTM5 -52774 sc-eQTL 8.55e-01 0.00887 0.0485 0.494 CD8T L1
ENSG00000162517 PEF1 -939896 sc-eQTL 5.81e-01 -0.033 0.0597 0.494 CD8T L1
ENSG00000186056 MATN1-AS1 -13504 sc-eQTL 7.66e-01 0.0169 0.0568 0.494 CD8T L1
ENSG00000287510 AL137857.1 -26693 sc-eQTL 6.71e-01 -0.0304 0.0714 0.494 CD8T L1
ENSG00000060688 SNRNP40 -591788 sc-eQTL 1.51e-01 -0.113 0.0783 0.502 DC L1
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 9.89e-01 -0.00127 0.0932 0.502 DC L1
ENSG00000134644 PUM1 -360991 sc-eQTL 1.69e-01 0.1 0.0727 0.502 DC L1
ENSG00000162511 LAPTM5 -52774 sc-eQTL 1.31e-01 0.0786 0.0518 0.502 DC L1
ENSG00000162517 PEF1 -939896 sc-eQTL 7.35e-01 -0.0286 0.0845 0.502 DC L1
ENSG00000168528 SERINC2 -704565 sc-eQTL 9.08e-01 -0.00996 0.086 0.502 DC L1
ENSG00000284543 LINC01226 -801226 sc-eQTL 5.97e-01 0.0301 0.0569 0.502 DC L1
ENSG00000287510 AL137857.1 -26693 sc-eQTL 1.11e-01 -0.131 0.0819 0.502 DC L1
ENSG00000060688 SNRNP40 -591788 sc-eQTL 4.47e-01 0.0452 0.0594 0.494 Mono L1
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 2.80e-01 -0.0796 0.0735 0.494 Mono L1
ENSG00000134644 PUM1 -360991 sc-eQTL 6.71e-01 0.0201 0.0472 0.494 Mono L1
ENSG00000162511 LAPTM5 -52774 sc-eQTL 8.22e-01 0.00977 0.0434 0.494 Mono L1
ENSG00000162512 SDC3 -203758 sc-eQTL 4.23e-01 -0.067 0.0834 0.494 Mono L1
ENSG00000162517 PEF1 -939896 sc-eQTL 2.10e-01 -0.0735 0.0584 0.494 Mono L1
ENSG00000168528 SERINC2 -704565 sc-eQTL 3.99e-01 -0.0756 0.0895 0.494 Mono L1
ENSG00000284543 LINC01226 -801226 sc-eQTL 2.39e-01 0.0928 0.0787 0.494 Mono L1
ENSG00000287510 AL137857.1 -26693 sc-eQTL 8.88e-01 0.00971 0.069 0.494 Mono L1
ENSG00000060688 SNRNP40 -591788 sc-eQTL 1.93e-01 0.108 0.0828 0.494 NK L1
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 8.72e-02 -0.0971 0.0565 0.494 NK L1
ENSG00000134644 PUM1 -360991 sc-eQTL 4.33e-01 0.0468 0.0596 0.494 NK L1
ENSG00000162511 LAPTM5 -52774 sc-eQTL 6.39e-01 -0.0323 0.0686 0.494 NK L1
ENSG00000162517 PEF1 -939896 sc-eQTL 8.43e-01 -0.00996 0.0501 0.494 NK L1
ENSG00000186056 MATN1-AS1 -13504 sc-eQTL 2.38e-01 0.0911 0.0769 0.494 NK L1
ENSG00000287510 AL137857.1 -26693 sc-eQTL 7.00e-01 0.0275 0.0712 0.494 NK L1
ENSG00000060688 SNRNP40 -591788 sc-eQTL 8.94e-01 0.00833 0.0626 0.494 Other_T L1
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 8.67e-01 0.0112 0.0669 0.494 Other_T L1
ENSG00000134644 PUM1 -360991 sc-eQTL 1.65e-02 -0.143 0.0594 0.494 Other_T L1
ENSG00000162511 LAPTM5 -52774 sc-eQTL 7.57e-02 0.0874 0.049 0.494 Other_T L1
ENSG00000162517 PEF1 -939896 sc-eQTL 1.58e-01 0.0928 0.0656 0.494 Other_T L1
ENSG00000186056 MATN1-AS1 -13504 sc-eQTL 3.00e-01 0.0837 0.0806 0.494 Other_T L1
ENSG00000287510 AL137857.1 -26693 sc-eQTL 1.63e-01 -0.117 0.0837 0.494 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -591788 sc-eQTL 2.14e-01 0.121 0.0974 0.513 B_Activated L2
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 2.21e-01 0.121 0.0983 0.513 B_Activated L2
ENSG00000134644 PUM1 -360991 sc-eQTL 9.61e-01 0.00449 0.0917 0.513 B_Activated L2
ENSG00000162510 MATN1 -18585 sc-eQTL 1.27e-01 -0.122 0.0796 0.513 B_Activated L2
ENSG00000162511 LAPTM5 -52774 sc-eQTL 9.44e-01 -0.00391 0.0559 0.513 B_Activated L2
ENSG00000162517 PEF1 -939896 sc-eQTL 1.28e-01 0.144 0.0945 0.513 B_Activated L2
ENSG00000186056 MATN1-AS1 -13504 sc-eQTL 5.93e-01 0.0482 0.0902 0.513 B_Activated L2
ENSG00000287510 AL137857.1 -26693 sc-eQTL 4.45e-02 -0.16 0.0789 0.513 B_Activated L2
ENSG00000060688 SNRNP40 -591788 sc-eQTL 9.33e-01 0.00784 0.0933 0.494 B_Intermediate L2
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 7.50e-01 -0.0248 0.0778 0.494 B_Intermediate L2
ENSG00000134644 PUM1 -360991 sc-eQTL 3.63e-01 0.0667 0.0732 0.494 B_Intermediate L2
ENSG00000162510 MATN1 -18585 sc-eQTL 1.40e-01 0.113 0.076 0.494 B_Intermediate L2
ENSG00000162511 LAPTM5 -52774 sc-eQTL 4.74e-01 0.0336 0.0468 0.494 B_Intermediate L2
ENSG00000162517 PEF1 -939896 sc-eQTL 4.88e-01 -0.0604 0.0869 0.494 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -13504 sc-eQTL 2.91e-01 0.0695 0.0656 0.494 B_Intermediate L2
ENSG00000287510 AL137857.1 -26693 sc-eQTL 9.50e-01 -0.00466 0.0736 0.494 B_Intermediate L2
ENSG00000060688 SNRNP40 -591788 sc-eQTL 5.06e-01 0.0613 0.092 0.496 B_Memory L2
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 6.07e-01 0.0437 0.0848 0.496 B_Memory L2
ENSG00000134644 PUM1 -360991 sc-eQTL 3.14e-01 0.0744 0.0737 0.496 B_Memory L2
ENSG00000162510 MATN1 -18585 sc-eQTL 9.68e-01 0.0028 0.0707 0.496 B_Memory L2
ENSG00000162511 LAPTM5 -52774 sc-eQTL 3.32e-01 0.0608 0.0625 0.496 B_Memory L2
ENSG00000162517 PEF1 -939896 sc-eQTL 8.93e-01 0.0112 0.0836 0.496 B_Memory L2
ENSG00000186056 MATN1-AS1 -13504 sc-eQTL 5.95e-01 0.0381 0.0716 0.496 B_Memory L2
ENSG00000287510 AL137857.1 -26693 sc-eQTL 6.23e-01 0.0413 0.0839 0.496 B_Memory L2
ENSG00000060688 SNRNP40 -591788 sc-eQTL 9.74e-01 -0.00272 0.0825 0.494 B_Naive1 L2
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 3.99e-01 0.0601 0.0711 0.494 B_Naive1 L2
ENSG00000134644 PUM1 -360991 sc-eQTL 7.23e-01 -0.0223 0.0628 0.494 B_Naive1 L2
ENSG00000162510 MATN1 -18585 sc-eQTL 7.81e-04 -0.212 0.0621 0.494 B_Naive1 L2
ENSG00000162511 LAPTM5 -52774 sc-eQTL 3.83e-01 0.0372 0.0425 0.494 B_Naive1 L2
ENSG00000162517 PEF1 -939896 sc-eQTL 7.10e-01 0.028 0.075 0.494 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -13504 sc-eQTL 5.96e-01 -0.0296 0.0559 0.494 B_Naive1 L2
ENSG00000287510 AL137857.1 -26693 sc-eQTL 7.46e-02 0.123 0.0686 0.494 B_Naive1 L2
ENSG00000060688 SNRNP40 -591788 sc-eQTL 1.53e-01 -0.126 0.0882 0.494 B_Naive2 L2
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 2.35e-06 -0.337 0.0694 0.494 B_Naive2 L2
ENSG00000134644 PUM1 -360991 sc-eQTL 2.32e-01 -0.0855 0.0714 0.494 B_Naive2 L2
ENSG00000162510 MATN1 -18585 sc-eQTL 2.06e-01 -0.0868 0.0685 0.494 B_Naive2 L2
ENSG00000162511 LAPTM5 -52774 sc-eQTL 4.43e-01 0.0358 0.0466 0.494 B_Naive2 L2
ENSG00000162517 PEF1 -939896 sc-eQTL 9.02e-01 -0.0104 0.0849 0.494 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -13504 sc-eQTL 9.63e-01 0.00315 0.068 0.494 B_Naive2 L2
ENSG00000287510 AL137857.1 -26693 sc-eQTL 1.60e-01 -0.103 0.0731 0.494 B_Naive2 L2
ENSG00000060688 SNRNP40 -591788 sc-eQTL 9.14e-01 -0.00937 0.0866 0.495 CD4_CTL L2
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 8.79e-01 0.013 0.0852 0.495 CD4_CTL L2
ENSG00000134644 PUM1 -360991 sc-eQTL 2.18e-01 0.103 0.0832 0.495 CD4_CTL L2
ENSG00000162511 LAPTM5 -52774 sc-eQTL 7.01e-01 -0.0287 0.0745 0.495 CD4_CTL L2
ENSG00000162517 PEF1 -939896 sc-eQTL 8.29e-01 -0.0165 0.0763 0.495 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -13504 sc-eQTL 2.24e-01 0.099 0.0812 0.495 CD4_CTL L2
ENSG00000287510 AL137857.1 -26693 sc-eQTL 7.57e-01 -0.0223 0.0719 0.495 CD4_CTL L2
ENSG00000060688 SNRNP40 -591788 sc-eQTL 7.51e-01 -0.0216 0.0681 0.494 CD4_Naive L2
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 6.13e-01 -0.0306 0.0604 0.494 CD4_Naive L2
ENSG00000134644 PUM1 -360991 sc-eQTL 4.50e-01 -0.0365 0.0482 0.494 CD4_Naive L2
ENSG00000162511 LAPTM5 -52774 sc-eQTL 7.62e-01 0.0157 0.0517 0.494 CD4_Naive L2
ENSG00000162517 PEF1 -939896 sc-eQTL 8.34e-01 -0.0119 0.0567 0.494 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -13504 sc-eQTL 4.87e-01 -0.0365 0.0524 0.494 CD4_Naive L2
ENSG00000287510 AL137857.1 -26693 sc-eQTL 4.44e-01 0.0462 0.0602 0.494 CD4_Naive L2
ENSG00000060688 SNRNP40 -591788 sc-eQTL 9.49e-02 0.142 0.0848 0.494 CD4_TCM L2
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 8.53e-01 0.0128 0.0688 0.494 CD4_TCM L2
ENSG00000134644 PUM1 -360991 sc-eQTL 7.40e-01 -0.0202 0.0609 0.494 CD4_TCM L2
ENSG00000162511 LAPTM5 -52774 sc-eQTL 2.50e-01 0.058 0.0504 0.494 CD4_TCM L2
ENSG00000162517 PEF1 -939896 sc-eQTL 7.36e-01 0.0229 0.0677 0.494 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -13504 sc-eQTL 2.09e-01 0.0805 0.0638 0.494 CD4_TCM L2
ENSG00000287510 AL137857.1 -26693 sc-eQTL 3.43e-02 -0.15 0.0706 0.494 CD4_TCM L2
ENSG00000060688 SNRNP40 -591788 sc-eQTL 4.96e-01 0.0578 0.0847 0.494 CD4_TEM L2
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 2.38e-01 0.0954 0.0806 0.494 CD4_TEM L2
ENSG00000134644 PUM1 -360991 sc-eQTL 9.84e-01 0.00138 0.0673 0.494 CD4_TEM L2
ENSG00000162511 LAPTM5 -52774 sc-eQTL 6.56e-01 0.0303 0.0681 0.494 CD4_TEM L2
ENSG00000162517 PEF1 -939896 sc-eQTL 7.55e-01 -0.0238 0.0763 0.494 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -13504 sc-eQTL 7.16e-01 0.029 0.0796 0.494 CD4_TEM L2
ENSG00000287510 AL137857.1 -26693 sc-eQTL 6.84e-01 0.0319 0.0785 0.494 CD4_TEM L2
ENSG00000060688 SNRNP40 -591788 sc-eQTL 7.60e-01 -0.0286 0.0935 0.494 CD8_CTL L2
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 2.80e-02 -0.157 0.0709 0.494 CD8_CTL L2
ENSG00000134644 PUM1 -360991 sc-eQTL 3.40e-01 0.0665 0.0695 0.494 CD8_CTL L2
ENSG00000162511 LAPTM5 -52774 sc-eQTL 6.73e-01 -0.0326 0.0771 0.494 CD8_CTL L2
ENSG00000162517 PEF1 -939896 sc-eQTL 9.08e-01 0.00776 0.0671 0.494 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -13504 sc-eQTL 7.65e-01 -0.0242 0.081 0.494 CD8_CTL L2
ENSG00000287510 AL137857.1 -26693 sc-eQTL 2.65e-01 -0.085 0.076 0.494 CD8_CTL L2
ENSG00000060688 SNRNP40 -591788 sc-eQTL 1.38e-01 0.126 0.085 0.494 CD8_Naive L2
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 7.34e-01 0.0251 0.0737 0.494 CD8_Naive L2
ENSG00000134644 PUM1 -360991 sc-eQTL 8.60e-02 -0.102 0.0589 0.494 CD8_Naive L2
ENSG00000162511 LAPTM5 -52774 sc-eQTL 2.46e-01 0.0659 0.0567 0.494 CD8_Naive L2
ENSG00000162517 PEF1 -939896 sc-eQTL 9.69e-01 -0.0031 0.079 0.494 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -13504 sc-eQTL 3.17e-01 0.071 0.0708 0.494 CD8_Naive L2
ENSG00000287510 AL137857.1 -26693 sc-eQTL 1.49e-01 0.111 0.0769 0.494 CD8_Naive L2
ENSG00000060688 SNRNP40 -591788 sc-eQTL 7.13e-01 0.0356 0.0964 0.486 CD8_TCM L2
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 3.78e-01 0.0779 0.0882 0.486 CD8_TCM L2
ENSG00000134644 PUM1 -360991 sc-eQTL 2.65e-01 -0.0927 0.0828 0.486 CD8_TCM L2
ENSG00000162511 LAPTM5 -52774 sc-eQTL 6.24e-01 -0.0427 0.0869 0.486 CD8_TCM L2
ENSG00000162517 PEF1 -939896 sc-eQTL 2.39e-01 -0.105 0.0886 0.486 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -13504 sc-eQTL 7.99e-01 0.0205 0.0805 0.486 CD8_TCM L2
ENSG00000287510 AL137857.1 -26693 sc-eQTL 3.34e-01 0.0787 0.0812 0.486 CD8_TCM L2
ENSG00000060688 SNRNP40 -591788 sc-eQTL 9.25e-01 0.00844 0.0899 0.491 CD8_TEM L2
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 3.52e-01 0.0802 0.086 0.491 CD8_TEM L2
ENSG00000134644 PUM1 -360991 sc-eQTL 5.52e-01 -0.0525 0.088 0.491 CD8_TEM L2
ENSG00000162511 LAPTM5 -52774 sc-eQTL 8.22e-01 -0.0187 0.0828 0.491 CD8_TEM L2
ENSG00000162517 PEF1 -939896 sc-eQTL 4.26e-01 -0.0621 0.0779 0.491 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -13504 sc-eQTL 7.76e-02 -0.151 0.0853 0.491 CD8_TEM L2
ENSG00000287510 AL137857.1 -26693 sc-eQTL 7.36e-02 -0.139 0.0772 0.491 CD8_TEM L2
ENSG00000060688 SNRNP40 -591788 sc-eQTL 5.41e-01 0.0553 0.0903 0.491 MAIT L2
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 1.46e-01 0.116 0.0797 0.491 MAIT L2
ENSG00000134644 PUM1 -360991 sc-eQTL 2.65e-01 -0.0856 0.0765 0.491 MAIT L2
ENSG00000162511 LAPTM5 -52774 sc-eQTL 3.97e-01 0.0613 0.0723 0.491 MAIT L2
ENSG00000162517 PEF1 -939896 sc-eQTL 6.00e-01 0.0417 0.0795 0.491 MAIT L2
ENSG00000186056 MATN1-AS1 -13504 sc-eQTL 5.02e-01 0.0541 0.0806 0.491 MAIT L2
ENSG00000287510 AL137857.1 -26693 sc-eQTL 5.40e-02 -0.16 0.0824 0.491 MAIT L2
ENSG00000060688 SNRNP40 -591788 sc-eQTL 1.47e-01 0.135 0.0926 0.498 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 7.00e-02 -0.142 0.078 0.498 NK_CD56bright L2
ENSG00000134644 PUM1 -360991 sc-eQTL 3.41e-01 0.0786 0.0824 0.498 NK_CD56bright L2
ENSG00000162511 LAPTM5 -52774 sc-eQTL 1.91e-01 0.106 0.0811 0.498 NK_CD56bright L2
ENSG00000162517 PEF1 -939896 sc-eQTL 6.90e-01 -0.0316 0.0791 0.498 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -13504 sc-eQTL 5.83e-01 -0.045 0.0818 0.498 NK_CD56bright L2
ENSG00000287510 AL137857.1 -26693 sc-eQTL 6.17e-01 0.0404 0.0806 0.498 NK_CD56bright L2
ENSG00000060688 SNRNP40 -591788 sc-eQTL 6.81e-01 0.0366 0.0888 0.496 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 3.69e-02 -0.137 0.065 0.496 NK_CD56dim L2
ENSG00000134644 PUM1 -360991 sc-eQTL 9.23e-01 -0.00649 0.0674 0.496 NK_CD56dim L2
ENSG00000162511 LAPTM5 -52774 sc-eQTL 2.57e-01 -0.0814 0.0716 0.496 NK_CD56dim L2
ENSG00000162517 PEF1 -939896 sc-eQTL 3.19e-01 -0.0637 0.0638 0.496 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -13504 sc-eQTL 2.53e-01 0.103 0.0897 0.496 NK_CD56dim L2
ENSG00000287510 AL137857.1 -26693 sc-eQTL 7.48e-01 0.0239 0.0743 0.496 NK_CD56dim L2
ENSG00000060688 SNRNP40 -591788 sc-eQTL 8.76e-01 0.0147 0.0945 0.502 NK_HLA L2
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 1.95e-02 0.196 0.0832 0.502 NK_HLA L2
ENSG00000134644 PUM1 -360991 sc-eQTL 3.99e-01 0.0694 0.0821 0.502 NK_HLA L2
ENSG00000162511 LAPTM5 -52774 sc-eQTL 3.79e-01 0.0691 0.0783 0.502 NK_HLA L2
ENSG00000162517 PEF1 -939896 sc-eQTL 6.60e-01 -0.039 0.0884 0.502 NK_HLA L2
ENSG00000186056 MATN1-AS1 -13504 sc-eQTL 5.41e-01 0.051 0.0834 0.502 NK_HLA L2
ENSG00000287510 AL137857.1 -26693 sc-eQTL 3.47e-01 -0.0759 0.0805 0.502 NK_HLA L2
ENSG00000060688 SNRNP40 -591788 sc-eQTL 9.88e-01 0.00131 0.0866 0.496 NK_cytokine L2
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 6.33e-01 -0.0323 0.0676 0.496 NK_cytokine L2
ENSG00000134644 PUM1 -360991 sc-eQTL 1.36e-01 0.109 0.0727 0.496 NK_cytokine L2
ENSG00000162511 LAPTM5 -52774 sc-eQTL 9.42e-01 -0.00583 0.0805 0.496 NK_cytokine L2
ENSG00000162517 PEF1 -939896 sc-eQTL 9.64e-01 0.00313 0.0686 0.496 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -13504 sc-eQTL 5.53e-01 0.0507 0.0852 0.496 NK_cytokine L2
ENSG00000287510 AL137857.1 -26693 sc-eQTL 9.62e-01 -0.0038 0.0794 0.496 NK_cytokine L2
ENSG00000060688 SNRNP40 -591788 sc-eQTL 4.13e-01 0.0837 0.102 0.481 PB L2
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 8.22e-01 -0.0267 0.119 0.481 PB L2
ENSG00000134644 PUM1 -360991 sc-eQTL 4.22e-01 -0.0827 0.103 0.481 PB L2
ENSG00000162510 MATN1 -18585 sc-eQTL 5.81e-01 0.0531 0.0959 0.481 PB L2
ENSG00000162511 LAPTM5 -52774 sc-eQTL 9.49e-01 -0.0044 0.0686 0.481 PB L2
ENSG00000162517 PEF1 -939896 sc-eQTL 3.25e-01 -0.104 0.105 0.481 PB L2
ENSG00000186056 MATN1-AS1 -13504 sc-eQTL 1.85e-01 0.124 0.0931 0.481 PB L2
ENSG00000287510 AL137857.1 -26693 sc-eQTL 5.02e-01 -0.0671 0.0997 0.481 PB L2
ENSG00000060688 SNRNP40 -591788 sc-eQTL 6.78e-02 -0.121 0.0659 0.489 Pro_T L2
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 3.66e-01 -0.0762 0.0842 0.489 Pro_T L2
ENSG00000134644 PUM1 -360991 sc-eQTL 1.14e-01 -0.124 0.0782 0.489 Pro_T L2
ENSG00000162511 LAPTM5 -52774 sc-eQTL 4.81e-01 0.0398 0.0564 0.489 Pro_T L2
ENSG00000162517 PEF1 -939896 sc-eQTL 4.39e-01 0.0641 0.0827 0.489 Pro_T L2
ENSG00000186056 MATN1-AS1 -13504 sc-eQTL 7.15e-01 -0.0288 0.0788 0.489 Pro_T L2
ENSG00000287510 AL137857.1 -26693 sc-eQTL 1.55e-01 -0.103 0.0722 0.489 Pro_T L2
ENSG00000060688 SNRNP40 -591788 sc-eQTL 9.57e-01 -0.00473 0.0882 0.494 Treg L2
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 3.91e-01 0.0732 0.0852 0.494 Treg L2
ENSG00000134644 PUM1 -360991 sc-eQTL 9.84e-01 -0.00138 0.0683 0.494 Treg L2
ENSG00000162511 LAPTM5 -52774 sc-eQTL 8.88e-01 0.011 0.0782 0.494 Treg L2
ENSG00000162517 PEF1 -939896 sc-eQTL 9.11e-01 -0.00948 0.0845 0.494 Treg L2
ENSG00000186056 MATN1-AS1 -13504 sc-eQTL 3.72e-02 0.165 0.0789 0.494 Treg L2
ENSG00000287510 AL137857.1 -26693 sc-eQTL 8.23e-01 -0.0178 0.0796 0.494 Treg L2
ENSG00000060688 SNRNP40 -591788 sc-eQTL 5.76e-01 -0.0508 0.0905 0.507 cDC L2
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 9.11e-01 -0.011 0.0981 0.507 cDC L2
ENSG00000134644 PUM1 -360991 sc-eQTL 4.80e-01 0.0596 0.0841 0.507 cDC L2
ENSG00000162511 LAPTM5 -52774 sc-eQTL 4.09e-01 0.0488 0.0589 0.507 cDC L2
ENSG00000162517 PEF1 -939896 sc-eQTL 8.93e-01 0.0116 0.0855 0.507 cDC L2
ENSG00000168528 SERINC2 -704565 sc-eQTL 4.74e-01 -0.0544 0.0757 0.507 cDC L2
ENSG00000284543 LINC01226 -801226 sc-eQTL 6.61e-03 0.201 0.073 0.507 cDC L2
ENSG00000287510 AL137857.1 -26693 sc-eQTL 1.06e-01 -0.129 0.0796 0.507 cDC L2
ENSG00000060688 SNRNP40 -591788 sc-eQTL 5.87e-01 0.039 0.0717 0.494 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 4.23e-01 -0.0642 0.0799 0.494 cMono_IL1B L2
ENSG00000134644 PUM1 -360991 sc-eQTL 4.50e-01 0.041 0.0541 0.494 cMono_IL1B L2
ENSG00000162511 LAPTM5 -52774 sc-eQTL 9.08e-01 0.00552 0.0475 0.494 cMono_IL1B L2
ENSG00000162512 SDC3 -203758 sc-eQTL 2.84e-01 -0.096 0.0893 0.494 cMono_IL1B L2
ENSG00000162517 PEF1 -939896 sc-eQTL 9.65e-01 0.00318 0.0731 0.494 cMono_IL1B L2
ENSG00000168528 SERINC2 -704565 sc-eQTL 6.02e-01 -0.0473 0.0906 0.494 cMono_IL1B L2
ENSG00000284543 LINC01226 -801226 sc-eQTL 1.02e-01 0.131 0.0796 0.494 cMono_IL1B L2
ENSG00000287510 AL137857.1 -26693 sc-eQTL 9.94e-01 0.000536 0.0747 0.494 cMono_IL1B L2
ENSG00000060688 SNRNP40 -591788 sc-eQTL 7.21e-01 0.0271 0.0757 0.494 cMono_S100A L2
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 6.48e-01 0.0408 0.0895 0.494 cMono_S100A L2
ENSG00000134644 PUM1 -360991 sc-eQTL 8.79e-01 -0.00985 0.0647 0.494 cMono_S100A L2
ENSG00000162511 LAPTM5 -52774 sc-eQTL 9.74e-01 0.00162 0.0497 0.494 cMono_S100A L2
ENSG00000162512 SDC3 -203758 sc-eQTL 6.36e-01 0.0406 0.0858 0.494 cMono_S100A L2
ENSG00000162517 PEF1 -939896 sc-eQTL 1.40e-01 -0.114 0.0771 0.494 cMono_S100A L2
ENSG00000168528 SERINC2 -704565 sc-eQTL 5.50e-01 -0.0544 0.0908 0.494 cMono_S100A L2
ENSG00000284543 LINC01226 -801226 sc-eQTL 5.23e-01 0.0472 0.0738 0.494 cMono_S100A L2
ENSG00000287510 AL137857.1 -26693 sc-eQTL 9.61e-01 0.00362 0.0742 0.494 cMono_S100A L2
ENSG00000060688 SNRNP40 -591788 sc-eQTL 5.69e-01 0.0651 0.114 0.485 gdT L2
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 6.12e-01 0.0498 0.098 0.485 gdT L2
ENSG00000134644 PUM1 -360991 sc-eQTL 5.58e-01 0.0593 0.101 0.485 gdT L2
ENSG00000162511 LAPTM5 -52774 sc-eQTL 6.30e-01 -0.053 0.11 0.485 gdT L2
ENSG00000162517 PEF1 -939896 sc-eQTL 9.07e-01 -0.0118 0.101 0.485 gdT L2
ENSG00000186056 MATN1-AS1 -13504 sc-eQTL 8.19e-01 0.0232 0.101 0.485 gdT L2
ENSG00000287510 AL137857.1 -26693 sc-eQTL 5.21e-01 -0.0631 0.0981 0.485 gdT L2
ENSG00000060688 SNRNP40 -591788 sc-eQTL 3.08e-01 0.0858 0.0839 0.498 intMono L2
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 1.31e-01 -0.136 0.09 0.498 intMono L2
ENSG00000134644 PUM1 -360991 sc-eQTL 9.92e-01 -0.000727 0.0768 0.498 intMono L2
ENSG00000162511 LAPTM5 -52774 sc-eQTL 1.40e-01 0.0888 0.0599 0.498 intMono L2
ENSG00000162512 SDC3 -203758 sc-eQTL 5.25e-01 -0.0525 0.0824 0.498 intMono L2
ENSG00000162517 PEF1 -939896 sc-eQTL 8.86e-01 -0.0125 0.0866 0.498 intMono L2
ENSG00000168528 SERINC2 -704565 sc-eQTL 2.73e-02 -0.19 0.0853 0.498 intMono L2
ENSG00000284543 LINC01226 -801226 sc-eQTL 9.23e-01 0.00788 0.0818 0.498 intMono L2
ENSG00000287510 AL137857.1 -26693 sc-eQTL 5.10e-01 0.0539 0.0817 0.498 intMono L2
ENSG00000060688 SNRNP40 -591788 sc-eQTL 5.48e-01 0.0474 0.0788 0.495 ncMono L2
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 6.68e-01 -0.036 0.084 0.495 ncMono L2
ENSG00000134644 PUM1 -360991 sc-eQTL 7.15e-01 0.0251 0.0687 0.495 ncMono L2
ENSG00000162511 LAPTM5 -52774 sc-eQTL 7.11e-01 0.0231 0.0624 0.495 ncMono L2
ENSG00000162512 SDC3 -203758 sc-eQTL 9.60e-02 -0.116 0.0695 0.495 ncMono L2
ENSG00000162517 PEF1 -939896 sc-eQTL 6.84e-01 0.0327 0.0802 0.495 ncMono L2
ENSG00000168528 SERINC2 -704565 sc-eQTL 7.15e-01 -0.0279 0.0763 0.495 ncMono L2
ENSG00000284543 LINC01226 -801226 sc-eQTL 7.17e-01 -0.0277 0.0762 0.495 ncMono L2
ENSG00000287510 AL137857.1 -26693 sc-eQTL 2.10e-01 -0.0991 0.0788 0.495 ncMono L2
ENSG00000060688 SNRNP40 -591788 sc-eQTL 4.13e-01 -0.0716 0.0872 0.5 pDC L2
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 5.27e-01 0.0607 0.0958 0.5 pDC L2
ENSG00000134644 PUM1 -360991 sc-eQTL 3.73e-01 0.0709 0.0793 0.5 pDC L2
ENSG00000162511 LAPTM5 -52774 sc-eQTL 2.29e-01 0.0888 0.0736 0.5 pDC L2
ENSG00000162517 PEF1 -939896 sc-eQTL 4.49e-01 -0.0727 0.0957 0.5 pDC L2
ENSG00000168528 SERINC2 -704565 sc-eQTL 8.69e-01 0.0149 0.0896 0.5 pDC L2
ENSG00000284543 LINC01226 -801226 sc-eQTL 5.90e-01 -0.0375 0.0695 0.5 pDC L2
ENSG00000287510 AL137857.1 -26693 sc-eQTL 7.39e-01 -0.0273 0.0818 0.5 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -591788 sc-eQTL 2.96e-01 0.0925 0.0883 0.494 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 8.49e-01 0.014 0.0737 0.494 B_Memory LOneK1K
ENSG00000134644 PUM1 -360991 sc-eQTL 1.86e-01 0.0863 0.065 0.494 B_Memory LOneK1K
ENSG00000162510 MATN1 -18585 sc-eQTL 4.81e-01 0.0525 0.0744 0.494 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -52774 sc-eQTL 8.77e-02 0.0797 0.0465 0.494 B_Memory LOneK1K
ENSG00000162517 PEF1 -939896 sc-eQTL 6.55e-01 -0.0347 0.0775 0.494 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -13504 sc-eQTL 2.01e-01 0.0791 0.0616 0.494 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -26693 sc-eQTL 4.24e-01 -0.054 0.0673 0.494 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -591788 sc-eQTL 2.34e-01 -0.0956 0.0801 0.494 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 1.11e-01 -0.101 0.0632 0.494 B_Naive LOneK1K
ENSG00000134644 PUM1 -360991 sc-eQTL 4.51e-01 -0.0453 0.06 0.494 B_Naive LOneK1K
ENSG00000162510 MATN1 -18585 sc-eQTL 5.65e-04 -0.197 0.0563 0.494 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -52774 sc-eQTL 4.12e-01 0.0334 0.0407 0.494 B_Naive LOneK1K
ENSG00000162517 PEF1 -939896 sc-eQTL 9.65e-01 -0.00324 0.0744 0.494 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -13504 sc-eQTL 4.41e-01 -0.0406 0.0525 0.494 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -26693 sc-eQTL 3.53e-01 0.0581 0.0624 0.494 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -591788 sc-eQTL 7.80e-01 0.0191 0.0683 0.494 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 6.07e-01 -0.0398 0.0773 0.494 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -360991 sc-eQTL 5.43e-01 0.03 0.0493 0.494 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -52774 sc-eQTL 9.44e-01 -0.00304 0.0434 0.494 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -203758 sc-eQTL 4.91e-01 -0.061 0.0884 0.494 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -939896 sc-eQTL 4.14e-01 -0.0508 0.0621 0.494 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -704565 sc-eQTL 5.07e-01 -0.0604 0.0909 0.494 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -801226 sc-eQTL 9.71e-02 0.124 0.0741 0.494 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -26693 sc-eQTL 8.10e-01 0.0168 0.0698 0.494 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -591788 sc-eQTL 1.58e-01 0.106 0.0746 0.496 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 1.06e-01 -0.132 0.0815 0.496 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -360991 sc-eQTL 9.66e-01 -0.00282 0.0672 0.496 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -52774 sc-eQTL 3.27e-01 0.0527 0.0536 0.496 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -203758 sc-eQTL 3.64e-01 -0.0713 0.0783 0.496 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -939896 sc-eQTL 5.06e-01 -0.0474 0.0712 0.496 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -704565 sc-eQTL 9.15e-02 -0.137 0.0808 0.496 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -801226 sc-eQTL 9.58e-01 -0.00412 0.0772 0.496 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -26693 sc-eQTL 8.78e-01 -0.0119 0.0773 0.496 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -591788 sc-eQTL 3.45e-01 0.0794 0.0838 0.496 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -591982 sc-eQTL 2.46e-01 -0.0665 0.0572 0.496 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -360991 sc-eQTL 5.42e-01 0.0383 0.0628 0.496 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -52774 sc-eQTL 6.20e-01 -0.0348 0.0702 0.496 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -939896 sc-eQTL 8.14e-01 -0.0125 0.0533 0.496 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -13504 sc-eQTL 2.14e-01 0.101 0.0807 0.496 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -26693 sc-eQTL 5.27e-01 -0.0443 0.0698 0.496 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000121766 ZCCHC17 -591982 eQTL 3.90e-02 0.0361 0.0175 0.0 0.0 0.462
ENSG00000162510 MATN1 -18585 eQTL 0.00207 0.0595 0.0193 0.00223 0.00193 0.462
ENSG00000162511 LAPTM5 -52774 eQTL 2.16e-07 -0.0507 0.00972 0.0 0.0 0.462
ENSG00000168528 SERINC2 -704565 eQTL 0.00525 0.106 0.0379 0.0 0.0 0.462

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162510 MATN1 -18585 3.75e-05 1.28e-05 1.51e-06 6.69e-06 2.54e-06 7.63e-06 1.31e-05 2.08e-06 1e-05 5.41e-06 1.41e-05 6.02e-06 1.85e-05 4.19e-06 3.67e-06 7.21e-06 6.49e-06 1.21e-05 2.66e-06 2.82e-06 6.5e-06 1.15e-05 1.21e-05 3.28e-06 2e-05 4.4e-06 6.74e-06 4.62e-06 1.15e-05 1.16e-05 6.13e-06 7.86e-07 1.23e-06 3.06e-06 4.77e-06 2.28e-06 1.41e-06 1.9e-06 1.84e-06 9.71e-07 1.03e-06 1.7e-05 2.64e-06 1.74e-07 9.29e-07 1.68e-06 1.8e-06 7.32e-07 5.09e-07
ENSG00000162511 LAPTM5 -52774 1.24e-05 7.87e-06 8.15e-07 3.57e-06 1.66e-06 4.07e-06 8.23e-06 1.09e-06 5.05e-06 2.84e-06 7.76e-06 2.78e-06 9.82e-06 2.24e-06 1.13e-06 3.93e-06 2.84e-06 3.94e-06 1.47e-06 1.14e-06 2.84e-06 6.12e-06 5.34e-06 1.42e-06 9.74e-06 2.1e-06 3.25e-06 1.52e-06 5e-06 6.66e-06 2.62e-06 5.26e-07 7.32e-07 1.46e-06 2e-06 9.43e-07 9.3e-07 3.91e-07 1.04e-06 3.57e-07 4.03e-07 8.29e-06 1.45e-06 2.07e-07 8.03e-07 6.75e-07 1.08e-06 2.87e-07 3.34e-07