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Genes within 1Mb (chr1:30704428:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -592360 sc-eQTL 9.29e-02 -0.136 0.0806 0.688 B L1
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 5.78e-02 -0.123 0.0644 0.688 B L1
ENSG00000134644 PUM1 -361563 sc-eQTL 4.48e-01 0.0414 0.0544 0.688 B L1
ENSG00000162510 MATN1 -19157 sc-eQTL 5.04e-02 -0.112 0.0568 0.688 B L1
ENSG00000162511 LAPTM5 -53346 sc-eQTL 8.07e-02 0.0782 0.0445 0.688 B L1
ENSG00000162517 PEF1 -940468 sc-eQTL 5.27e-01 0.0428 0.0677 0.688 B L1
ENSG00000186056 MATN1-AS1 -14076 sc-eQTL 2.85e-01 -0.0562 0.0524 0.688 B L1
ENSG00000287510 AL137857.1 -27265 sc-eQTL 5.53e-01 0.0369 0.0622 0.688 B L1
ENSG00000060688 SNRNP40 -592360 sc-eQTL 6.87e-01 -0.0287 0.071 0.688 CD4T L1
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 4.42e-01 0.0427 0.0554 0.688 CD4T L1
ENSG00000134644 PUM1 -361563 sc-eQTL 5.75e-01 0.0277 0.0494 0.688 CD4T L1
ENSG00000162511 LAPTM5 -53346 sc-eQTL 2.16e-01 0.0678 0.0546 0.688 CD4T L1
ENSG00000162517 PEF1 -940468 sc-eQTL 5.81e-01 0.0316 0.0572 0.688 CD4T L1
ENSG00000186056 MATN1-AS1 -14076 sc-eQTL 1.77e-01 -0.0661 0.0488 0.688 CD4T L1
ENSG00000287510 AL137857.1 -27265 sc-eQTL 8.84e-01 -0.00861 0.0587 0.688 CD4T L1
ENSG00000060688 SNRNP40 -592360 sc-eQTL 5.88e-01 0.0499 0.0921 0.688 CD8T L1
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 2.24e-01 -0.0746 0.0611 0.688 CD8T L1
ENSG00000134644 PUM1 -361563 sc-eQTL 1.06e-01 0.087 0.0537 0.688 CD8T L1
ENSG00000162511 LAPTM5 -53346 sc-eQTL 2.46e-02 0.117 0.0518 0.688 CD8T L1
ENSG00000162517 PEF1 -940468 sc-eQTL 8.45e-01 -0.0126 0.0646 0.688 CD8T L1
ENSG00000186056 MATN1-AS1 -14076 sc-eQTL 1.48e-01 -0.0889 0.0612 0.688 CD8T L1
ENSG00000287510 AL137857.1 -27265 sc-eQTL 2.00e-01 0.099 0.0769 0.688 CD8T L1
ENSG00000060688 SNRNP40 -592360 sc-eQTL 1.43e-01 -0.121 0.0819 0.689 DC L1
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 4.41e-01 0.0751 0.0973 0.689 DC L1
ENSG00000134644 PUM1 -361563 sc-eQTL 4.71e-01 -0.0551 0.0762 0.689 DC L1
ENSG00000162511 LAPTM5 -53346 sc-eQTL 5.97e-01 0.0288 0.0545 0.689 DC L1
ENSG00000162517 PEF1 -940468 sc-eQTL 6.11e-01 -0.045 0.0883 0.689 DC L1
ENSG00000168528 SERINC2 -705137 sc-eQTL 6.29e-01 -0.0435 0.0898 0.689 DC L1
ENSG00000284543 LINC01226 -801798 sc-eQTL 9.39e-01 0.00457 0.0596 0.689 DC L1
ENSG00000287510 AL137857.1 -27265 sc-eQTL 1.27e-01 -0.131 0.0857 0.689 DC L1
ENSG00000060688 SNRNP40 -592360 sc-eQTL 4.12e-01 0.0525 0.0639 0.688 Mono L1
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 7.29e-01 -0.0275 0.0793 0.688 Mono L1
ENSG00000134644 PUM1 -361563 sc-eQTL 9.98e-01 0.000158 0.0509 0.688 Mono L1
ENSG00000162511 LAPTM5 -53346 sc-eQTL 4.87e-01 0.0325 0.0467 0.688 Mono L1
ENSG00000162512 SDC3 -204330 sc-eQTL 1.28e-01 -0.136 0.0894 0.688 Mono L1
ENSG00000162517 PEF1 -940468 sc-eQTL 6.17e-01 -0.0315 0.063 0.688 Mono L1
ENSG00000168528 SERINC2 -705137 sc-eQTL 7.34e-01 -0.0328 0.0964 0.688 Mono L1
ENSG00000284543 LINC01226 -801798 sc-eQTL 8.65e-01 0.0145 0.085 0.688 Mono L1
ENSG00000287510 AL137857.1 -27265 sc-eQTL 3.57e-01 0.0685 0.0741 0.688 Mono L1
ENSG00000060688 SNRNP40 -592360 sc-eQTL 5.16e-01 0.0584 0.0898 0.689 NK L1
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 1.67e-01 -0.085 0.0613 0.689 NK L1
ENSG00000134644 PUM1 -361563 sc-eQTL 2.48e-01 0.0745 0.0644 0.689 NK L1
ENSG00000162511 LAPTM5 -53346 sc-eQTL 1.72e-01 0.101 0.074 0.689 NK L1
ENSG00000162517 PEF1 -940468 sc-eQTL 6.74e-01 -0.0229 0.0542 0.689 NK L1
ENSG00000186056 MATN1-AS1 -14076 sc-eQTL 4.97e-01 -0.0568 0.0834 0.689 NK L1
ENSG00000287510 AL137857.1 -27265 sc-eQTL 1.40e-01 0.114 0.0767 0.689 NK L1
ENSG00000060688 SNRNP40 -592360 sc-eQTL 4.18e-01 0.0544 0.067 0.688 Other_T L1
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 9.61e-01 -0.0035 0.0718 0.688 Other_T L1
ENSG00000134644 PUM1 -361563 sc-eQTL 5.98e-02 -0.121 0.064 0.688 Other_T L1
ENSG00000162511 LAPTM5 -53346 sc-eQTL 7.08e-02 0.0953 0.0525 0.688 Other_T L1
ENSG00000162517 PEF1 -940468 sc-eQTL 1.87e-01 0.0931 0.0703 0.688 Other_T L1
ENSG00000186056 MATN1-AS1 -14076 sc-eQTL 7.61e-01 0.0264 0.0866 0.688 Other_T L1
ENSG00000287510 AL137857.1 -27265 sc-eQTL 9.68e-01 0.00366 0.0902 0.688 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -592360 sc-eQTL 9.26e-01 -0.0099 0.107 0.691 B_Activated L2
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 9.22e-01 0.0106 0.108 0.691 B_Activated L2
ENSG00000134644 PUM1 -361563 sc-eQTL 9.88e-01 -0.00151 0.0999 0.691 B_Activated L2
ENSG00000162510 MATN1 -19157 sc-eQTL 5.87e-01 -0.0474 0.0872 0.691 B_Activated L2
ENSG00000162511 LAPTM5 -53346 sc-eQTL 9.05e-01 0.00731 0.0609 0.691 B_Activated L2
ENSG00000162517 PEF1 -940468 sc-eQTL 9.46e-02 0.173 0.103 0.691 B_Activated L2
ENSG00000186056 MATN1-AS1 -14076 sc-eQTL 6.06e-01 0.0508 0.0982 0.691 B_Activated L2
ENSG00000287510 AL137857.1 -27265 sc-eQTL 2.23e-01 -0.106 0.0866 0.691 B_Activated L2
ENSG00000060688 SNRNP40 -592360 sc-eQTL 9.08e-01 0.0115 0.0991 0.687 B_Intermediate L2
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 9.16e-01 -0.00867 0.0826 0.687 B_Intermediate L2
ENSG00000134644 PUM1 -361563 sc-eQTL 5.23e-01 0.0498 0.0778 0.687 B_Intermediate L2
ENSG00000162510 MATN1 -19157 sc-eQTL 2.07e-01 0.102 0.0808 0.687 B_Intermediate L2
ENSG00000162511 LAPTM5 -53346 sc-eQTL 2.98e-02 0.108 0.0492 0.687 B_Intermediate L2
ENSG00000162517 PEF1 -940468 sc-eQTL 7.31e-01 0.0318 0.0924 0.687 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -14076 sc-eQTL 6.40e-01 0.0327 0.0698 0.687 B_Intermediate L2
ENSG00000287510 AL137857.1 -27265 sc-eQTL 4.54e-01 -0.0586 0.078 0.687 B_Intermediate L2
ENSG00000060688 SNRNP40 -592360 sc-eQTL 8.69e-01 -0.0161 0.0979 0.69 B_Memory L2
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 3.26e-01 0.0887 0.09 0.69 B_Memory L2
ENSG00000134644 PUM1 -361563 sc-eQTL 4.67e-01 0.0572 0.0784 0.69 B_Memory L2
ENSG00000162510 MATN1 -19157 sc-eQTL 6.47e-01 -0.0344 0.0751 0.69 B_Memory L2
ENSG00000162511 LAPTM5 -53346 sc-eQTL 2.07e-01 0.0839 0.0663 0.69 B_Memory L2
ENSG00000162517 PEF1 -940468 sc-eQTL 9.27e-01 0.00811 0.0889 0.69 B_Memory L2
ENSG00000186056 MATN1-AS1 -14076 sc-eQTL 7.24e-01 -0.0269 0.0762 0.69 B_Memory L2
ENSG00000287510 AL137857.1 -27265 sc-eQTL 2.26e-01 0.108 0.0889 0.69 B_Memory L2
ENSG00000060688 SNRNP40 -592360 sc-eQTL 6.96e-01 -0.035 0.0894 0.688 B_Naive1 L2
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 2.09e-01 -0.097 0.077 0.688 B_Naive1 L2
ENSG00000134644 PUM1 -361563 sc-eQTL 4.66e-01 0.0498 0.0681 0.688 B_Naive1 L2
ENSG00000162510 MATN1 -19157 sc-eQTL 2.32e-02 -0.156 0.0683 0.688 B_Naive1 L2
ENSG00000162511 LAPTM5 -53346 sc-eQTL 1.01e-01 0.0755 0.0459 0.688 B_Naive1 L2
ENSG00000162517 PEF1 -940468 sc-eQTL 8.50e-02 0.14 0.0809 0.688 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -14076 sc-eQTL 1.64e-01 -0.0844 0.0604 0.688 B_Naive1 L2
ENSG00000287510 AL137857.1 -27265 sc-eQTL 7.22e-03 0.2 0.0737 0.688 B_Naive1 L2
ENSG00000060688 SNRNP40 -592360 sc-eQTL 2.82e-03 -0.28 0.0926 0.689 B_Naive2 L2
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 8.06e-05 -0.303 0.0752 0.689 B_Naive2 L2
ENSG00000134644 PUM1 -361563 sc-eQTL 3.37e-01 -0.0734 0.0763 0.689 B_Naive2 L2
ENSG00000162510 MATN1 -19157 sc-eQTL 1.63e-01 -0.102 0.073 0.689 B_Naive2 L2
ENSG00000162511 LAPTM5 -53346 sc-eQTL 3.18e-02 0.107 0.0493 0.689 B_Naive2 L2
ENSG00000162517 PEF1 -940468 sc-eQTL 1.90e-01 -0.119 0.0903 0.689 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -14076 sc-eQTL 9.36e-02 -0.121 0.0721 0.689 B_Naive2 L2
ENSG00000287510 AL137857.1 -27265 sc-eQTL 3.38e-01 -0.0751 0.0782 0.689 B_Naive2 L2
ENSG00000060688 SNRNP40 -592360 sc-eQTL 6.49e-01 0.0427 0.0937 0.686 CD4_CTL L2
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 8.04e-01 -0.0229 0.0922 0.686 CD4_CTL L2
ENSG00000134644 PUM1 -361563 sc-eQTL 4.76e-01 0.0645 0.0903 0.686 CD4_CTL L2
ENSG00000162511 LAPTM5 -53346 sc-eQTL 3.57e-01 0.0742 0.0804 0.686 CD4_CTL L2
ENSG00000162517 PEF1 -940468 sc-eQTL 6.51e-01 0.0374 0.0826 0.686 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -14076 sc-eQTL 3.58e-01 0.0811 0.088 0.686 CD4_CTL L2
ENSG00000287510 AL137857.1 -27265 sc-eQTL 8.21e-01 -0.0176 0.0778 0.686 CD4_CTL L2
ENSG00000060688 SNRNP40 -592360 sc-eQTL 2.92e-01 -0.0786 0.0744 0.688 CD4_Naive L2
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 6.75e-01 -0.0277 0.0661 0.688 CD4_Naive L2
ENSG00000134644 PUM1 -361563 sc-eQTL 3.48e-01 0.0496 0.0527 0.688 CD4_Naive L2
ENSG00000162511 LAPTM5 -53346 sc-eQTL 3.19e-01 0.0564 0.0565 0.688 CD4_Naive L2
ENSG00000162517 PEF1 -940468 sc-eQTL 9.80e-01 -0.00152 0.0621 0.688 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -14076 sc-eQTL 4.18e-02 -0.117 0.0569 0.688 CD4_Naive L2
ENSG00000287510 AL137857.1 -27265 sc-eQTL 6.91e-01 0.0263 0.066 0.688 CD4_Naive L2
ENSG00000060688 SNRNP40 -592360 sc-eQTL 4.70e-01 0.0675 0.0933 0.688 CD4_TCM L2
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 8.69e-01 0.0124 0.0753 0.688 CD4_TCM L2
ENSG00000134644 PUM1 -361563 sc-eQTL 5.12e-01 0.0438 0.0666 0.688 CD4_TCM L2
ENSG00000162511 LAPTM5 -53346 sc-eQTL 1.15e-02 0.139 0.0545 0.688 CD4_TCM L2
ENSG00000162517 PEF1 -940468 sc-eQTL 4.99e-01 0.0501 0.0741 0.688 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -14076 sc-eQTL 5.61e-01 -0.0408 0.0701 0.688 CD4_TCM L2
ENSG00000287510 AL137857.1 -27265 sc-eQTL 3.50e-02 -0.164 0.0774 0.688 CD4_TCM L2
ENSG00000060688 SNRNP40 -592360 sc-eQTL 8.21e-01 -0.0209 0.0924 0.688 CD4_TEM L2
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 9.00e-02 0.149 0.0875 0.688 CD4_TEM L2
ENSG00000134644 PUM1 -361563 sc-eQTL 6.69e-01 0.0314 0.0733 0.688 CD4_TEM L2
ENSG00000162511 LAPTM5 -53346 sc-eQTL 5.96e-02 0.139 0.0736 0.688 CD4_TEM L2
ENSG00000162517 PEF1 -940468 sc-eQTL 7.41e-01 0.0275 0.0831 0.688 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -14076 sc-eQTL 8.72e-01 -0.014 0.0868 0.688 CD4_TEM L2
ENSG00000287510 AL137857.1 -27265 sc-eQTL 5.93e-01 0.0457 0.0855 0.688 CD4_TEM L2
ENSG00000060688 SNRNP40 -592360 sc-eQTL 9.32e-01 -0.00862 0.101 0.688 CD8_CTL L2
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 1.54e-01 -0.11 0.0769 0.688 CD8_CTL L2
ENSG00000134644 PUM1 -361563 sc-eQTL 2.62e-01 0.084 0.0748 0.688 CD8_CTL L2
ENSG00000162511 LAPTM5 -53346 sc-eQTL 4.42e-01 0.0639 0.0829 0.688 CD8_CTL L2
ENSG00000162517 PEF1 -940468 sc-eQTL 1.30e-01 0.109 0.0719 0.688 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -14076 sc-eQTL 1.92e-02 -0.203 0.0862 0.688 CD8_CTL L2
ENSG00000287510 AL137857.1 -27265 sc-eQTL 8.16e-01 0.0191 0.0821 0.688 CD8_CTL L2
ENSG00000060688 SNRNP40 -592360 sc-eQTL 7.95e-01 -0.024 0.0925 0.688 CD8_Naive L2
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 7.72e-01 -0.0231 0.0798 0.688 CD8_Naive L2
ENSG00000134644 PUM1 -361563 sc-eQTL 7.78e-01 -0.0181 0.0642 0.688 CD8_Naive L2
ENSG00000162511 LAPTM5 -53346 sc-eQTL 1.48e-03 0.194 0.0601 0.688 CD8_Naive L2
ENSG00000162517 PEF1 -940468 sc-eQTL 1.46e-01 -0.124 0.0851 0.688 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -14076 sc-eQTL 5.59e-01 -0.045 0.0767 0.688 CD8_Naive L2
ENSG00000287510 AL137857.1 -27265 sc-eQTL 1.84e-01 0.111 0.0833 0.688 CD8_Naive L2
ENSG00000060688 SNRNP40 -592360 sc-eQTL 4.23e-01 0.0816 0.102 0.683 CD8_TCM L2
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 8.84e-01 -0.0137 0.0933 0.683 CD8_TCM L2
ENSG00000134644 PUM1 -361563 sc-eQTL 7.67e-01 -0.026 0.0877 0.683 CD8_TCM L2
ENSG00000162511 LAPTM5 -53346 sc-eQTL 6.92e-01 0.0364 0.0918 0.683 CD8_TCM L2
ENSG00000162517 PEF1 -940468 sc-eQTL 2.52e-01 -0.107 0.0935 0.683 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -14076 sc-eQTL 6.15e-01 -0.0428 0.0849 0.683 CD8_TCM L2
ENSG00000287510 AL137857.1 -27265 sc-eQTL 6.42e-01 0.04 0.0859 0.683 CD8_TCM L2
ENSG00000060688 SNRNP40 -592360 sc-eQTL 5.52e-01 0.0578 0.097 0.685 CD8_TEM L2
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 2.90e-01 0.0985 0.0928 0.685 CD8_TEM L2
ENSG00000134644 PUM1 -361563 sc-eQTL 7.03e-01 -0.0362 0.0951 0.685 CD8_TEM L2
ENSG00000162511 LAPTM5 -53346 sc-eQTL 2.57e-01 0.101 0.0891 0.685 CD8_TEM L2
ENSG00000162517 PEF1 -940468 sc-eQTL 7.30e-01 -0.0291 0.0842 0.685 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -14076 sc-eQTL 1.61e-01 -0.13 0.0923 0.685 CD8_TEM L2
ENSG00000287510 AL137857.1 -27265 sc-eQTL 1.27e-02 -0.208 0.0827 0.685 CD8_TEM L2
ENSG00000060688 SNRNP40 -592360 sc-eQTL 5.17e-01 0.0634 0.0977 0.686 MAIT L2
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 4.53e-01 0.0651 0.0865 0.686 MAIT L2
ENSG00000134644 PUM1 -361563 sc-eQTL 5.70e-01 -0.0472 0.083 0.686 MAIT L2
ENSG00000162511 LAPTM5 -53346 sc-eQTL 2.56e-01 0.0891 0.0781 0.686 MAIT L2
ENSG00000162517 PEF1 -940468 sc-eQTL 7.97e-01 0.0222 0.0861 0.686 MAIT L2
ENSG00000186056 MATN1-AS1 -14076 sc-eQTL 8.53e-01 0.0162 0.0873 0.686 MAIT L2
ENSG00000287510 AL137857.1 -27265 sc-eQTL 2.64e-01 -0.1 0.0897 0.686 MAIT L2
ENSG00000060688 SNRNP40 -592360 sc-eQTL 4.53e-01 0.0745 0.0992 0.693 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 1.81e-01 -0.112 0.0835 0.693 NK_CD56bright L2
ENSG00000134644 PUM1 -361563 sc-eQTL 5.21e-01 0.0566 0.088 0.693 NK_CD56bright L2
ENSG00000162511 LAPTM5 -53346 sc-eQTL 7.78e-02 0.153 0.0862 0.693 NK_CD56bright L2
ENSG00000162517 PEF1 -940468 sc-eQTL 5.82e-01 -0.0465 0.0844 0.693 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -14076 sc-eQTL 4.16e-01 0.0711 0.0872 0.693 NK_CD56bright L2
ENSG00000287510 AL137857.1 -27265 sc-eQTL 8.52e-01 0.0161 0.086 0.693 NK_CD56bright L2
ENSG00000060688 SNRNP40 -592360 sc-eQTL 8.54e-01 -0.0175 0.0946 0.69 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 3.69e-01 -0.0629 0.0698 0.69 NK_CD56dim L2
ENSG00000134644 PUM1 -361563 sc-eQTL 6.38e-01 0.0338 0.0718 0.69 NK_CD56dim L2
ENSG00000162511 LAPTM5 -53346 sc-eQTL 3.84e-01 0.0667 0.0764 0.69 NK_CD56dim L2
ENSG00000162517 PEF1 -940468 sc-eQTL 7.40e-01 -0.0226 0.0681 0.69 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -14076 sc-eQTL 4.35e-01 -0.0749 0.0958 0.69 NK_CD56dim L2
ENSG00000287510 AL137857.1 -27265 sc-eQTL 1.65e-01 0.11 0.0788 0.69 NK_CD56dim L2
ENSG00000060688 SNRNP40 -592360 sc-eQTL 9.89e-01 0.00139 0.102 0.696 NK_HLA L2
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 2.07e-01 0.115 0.0908 0.696 NK_HLA L2
ENSG00000134644 PUM1 -361563 sc-eQTL 9.63e-01 -0.00412 0.0888 0.696 NK_HLA L2
ENSG00000162511 LAPTM5 -53346 sc-eQTL 1.05e-02 0.216 0.0834 0.696 NK_HLA L2
ENSG00000162517 PEF1 -940468 sc-eQTL 7.88e-02 -0.167 0.0948 0.696 NK_HLA L2
ENSG00000186056 MATN1-AS1 -14076 sc-eQTL 9.72e-01 -0.00322 0.0902 0.696 NK_HLA L2
ENSG00000287510 AL137857.1 -27265 sc-eQTL 5.35e-01 0.0541 0.0871 0.696 NK_HLA L2
ENSG00000060688 SNRNP40 -592360 sc-eQTL 7.64e-01 0.0279 0.0926 0.69 NK_cytokine L2
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 6.32e-01 0.0346 0.0722 0.69 NK_cytokine L2
ENSG00000134644 PUM1 -361563 sc-eQTL 1.29e-01 0.118 0.0777 0.69 NK_cytokine L2
ENSG00000162511 LAPTM5 -53346 sc-eQTL 1.67e-01 0.119 0.0856 0.69 NK_cytokine L2
ENSG00000162517 PEF1 -940468 sc-eQTL 9.08e-01 -0.00845 0.0733 0.69 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -14076 sc-eQTL 9.41e-01 0.00675 0.0912 0.69 NK_cytokine L2
ENSG00000287510 AL137857.1 -27265 sc-eQTL 9.97e-01 0.000346 0.0848 0.69 NK_cytokine L2
ENSG00000060688 SNRNP40 -592360 sc-eQTL 8.77e-01 -0.0164 0.105 0.678 PB L2
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 9.65e-01 -0.00543 0.122 0.678 PB L2
ENSG00000134644 PUM1 -361563 sc-eQTL 7.37e-01 0.0357 0.106 0.678 PB L2
ENSG00000162510 MATN1 -19157 sc-eQTL 7.11e-01 0.0367 0.0989 0.678 PB L2
ENSG00000162511 LAPTM5 -53346 sc-eQTL 9.37e-01 -0.00557 0.0707 0.678 PB L2
ENSG00000162517 PEF1 -940468 sc-eQTL 9.32e-01 0.00937 0.109 0.678 PB L2
ENSG00000186056 MATN1-AS1 -14076 sc-eQTL 3.91e-01 0.083 0.0964 0.678 PB L2
ENSG00000287510 AL137857.1 -27265 sc-eQTL 7.54e-01 -0.0323 0.103 0.678 PB L2
ENSG00000060688 SNRNP40 -592360 sc-eQTL 2.09e-01 -0.0898 0.0713 0.683 Pro_T L2
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 1.80e-01 -0.122 0.0905 0.683 Pro_T L2
ENSG00000134644 PUM1 -361563 sc-eQTL 8.33e-01 0.0179 0.0848 0.683 Pro_T L2
ENSG00000162511 LAPTM5 -53346 sc-eQTL 7.80e-02 0.107 0.0604 0.683 Pro_T L2
ENSG00000162517 PEF1 -940468 sc-eQTL 9.19e-01 0.00904 0.0893 0.683 Pro_T L2
ENSG00000186056 MATN1-AS1 -14076 sc-eQTL 8.07e-01 -0.0208 0.085 0.683 Pro_T L2
ENSG00000287510 AL137857.1 -27265 sc-eQTL 7.27e-01 -0.0273 0.0782 0.683 Pro_T L2
ENSG00000060688 SNRNP40 -592360 sc-eQTL 3.44e-01 0.0903 0.0952 0.688 Treg L2
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 2.06e-02 0.212 0.0911 0.688 Treg L2
ENSG00000134644 PUM1 -361563 sc-eQTL 8.66e-01 -0.0125 0.0738 0.688 Treg L2
ENSG00000162511 LAPTM5 -53346 sc-eQTL 3.43e-01 0.0802 0.0844 0.688 Treg L2
ENSG00000162517 PEF1 -940468 sc-eQTL 3.79e-02 -0.189 0.0904 0.688 Treg L2
ENSG00000186056 MATN1-AS1 -14076 sc-eQTL 4.17e-01 0.0699 0.086 0.688 Treg L2
ENSG00000287510 AL137857.1 -27265 sc-eQTL 9.57e-01 0.00468 0.086 0.688 Treg L2
ENSG00000060688 SNRNP40 -592360 sc-eQTL 5.05e-01 -0.0628 0.094 0.695 cDC L2
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 3.72e-01 -0.091 0.102 0.695 cDC L2
ENSG00000134644 PUM1 -361563 sc-eQTL 8.43e-01 0.0174 0.0875 0.695 cDC L2
ENSG00000162511 LAPTM5 -53346 sc-eQTL 2.67e-01 0.0681 0.0612 0.695 cDC L2
ENSG00000162517 PEF1 -940468 sc-eQTL 8.84e-01 0.013 0.0889 0.695 cDC L2
ENSG00000168528 SERINC2 -705137 sc-eQTL 7.45e-01 -0.0257 0.0788 0.695 cDC L2
ENSG00000284543 LINC01226 -801798 sc-eQTL 5.16e-02 0.15 0.0766 0.695 cDC L2
ENSG00000287510 AL137857.1 -27265 sc-eQTL 2.70e-01 -0.092 0.0831 0.695 cDC L2
ENSG00000060688 SNRNP40 -592360 sc-eQTL 6.86e-01 -0.0311 0.0767 0.688 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 9.16e-01 -0.00907 0.0856 0.688 cMono_IL1B L2
ENSG00000134644 PUM1 -361563 sc-eQTL 7.42e-01 -0.0191 0.058 0.688 cMono_IL1B L2
ENSG00000162511 LAPTM5 -53346 sc-eQTL 5.33e-01 0.0318 0.0508 0.688 cMono_IL1B L2
ENSG00000162512 SDC3 -204330 sc-eQTL 7.26e-01 -0.0336 0.0958 0.688 cMono_IL1B L2
ENSG00000162517 PEF1 -940468 sc-eQTL 8.03e-01 0.0195 0.0783 0.688 cMono_IL1B L2
ENSG00000168528 SERINC2 -705137 sc-eQTL 9.66e-01 0.00409 0.097 0.688 cMono_IL1B L2
ENSG00000284543 LINC01226 -801798 sc-eQTL 6.13e-01 0.0434 0.0857 0.688 cMono_IL1B L2
ENSG00000287510 AL137857.1 -27265 sc-eQTL 1.21e-01 0.124 0.0795 0.688 cMono_IL1B L2
ENSG00000060688 SNRNP40 -592360 sc-eQTL 7.67e-01 0.024 0.0808 0.688 cMono_S100A L2
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 8.95e-01 -0.0126 0.0955 0.688 cMono_S100A L2
ENSG00000134644 PUM1 -361563 sc-eQTL 6.40e-01 0.0323 0.069 0.688 cMono_S100A L2
ENSG00000162511 LAPTM5 -53346 sc-eQTL 7.26e-01 -0.0186 0.053 0.688 cMono_S100A L2
ENSG00000162512 SDC3 -204330 sc-eQTL 6.13e-01 -0.0464 0.0916 0.688 cMono_S100A L2
ENSG00000162517 PEF1 -940468 sc-eQTL 2.91e-01 -0.0873 0.0825 0.688 cMono_S100A L2
ENSG00000168528 SERINC2 -705137 sc-eQTL 5.56e-01 -0.0571 0.097 0.688 cMono_S100A L2
ENSG00000284543 LINC01226 -801798 sc-eQTL 7.57e-01 -0.0244 0.0788 0.688 cMono_S100A L2
ENSG00000287510 AL137857.1 -27265 sc-eQTL 9.24e-01 0.00756 0.0791 0.688 cMono_S100A L2
ENSG00000060688 SNRNP40 -592360 sc-eQTL 7.80e-01 0.0335 0.12 0.676 gdT L2
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 4.74e-01 0.0737 0.103 0.676 gdT L2
ENSG00000134644 PUM1 -361563 sc-eQTL 7.99e-01 0.027 0.106 0.676 gdT L2
ENSG00000162511 LAPTM5 -53346 sc-eQTL 6.96e-01 0.0451 0.115 0.676 gdT L2
ENSG00000162517 PEF1 -940468 sc-eQTL 8.36e-01 0.0218 0.105 0.676 gdT L2
ENSG00000186056 MATN1-AS1 -14076 sc-eQTL 3.89e-01 -0.0917 0.106 0.676 gdT L2
ENSG00000287510 AL137857.1 -27265 sc-eQTL 4.67e-01 -0.075 0.103 0.676 gdT L2
ENSG00000060688 SNRNP40 -592360 sc-eQTL 5.32e-01 0.0559 0.0893 0.689 intMono L2
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 7.80e-01 -0.0269 0.0961 0.689 intMono L2
ENSG00000134644 PUM1 -361563 sc-eQTL 2.33e-01 -0.0972 0.0812 0.689 intMono L2
ENSG00000162511 LAPTM5 -53346 sc-eQTL 3.44e-03 0.185 0.0626 0.689 intMono L2
ENSG00000162512 SDC3 -204330 sc-eQTL 9.60e-02 -0.145 0.087 0.689 intMono L2
ENSG00000162517 PEF1 -940468 sc-eQTL 4.87e-01 0.0639 0.0919 0.689 intMono L2
ENSG00000168528 SERINC2 -705137 sc-eQTL 7.43e-01 -0.0301 0.0917 0.689 intMono L2
ENSG00000284543 LINC01226 -801798 sc-eQTL 2.70e-01 0.0958 0.0866 0.689 intMono L2
ENSG00000287510 AL137857.1 -27265 sc-eQTL 8.85e-01 0.0125 0.0869 0.689 intMono L2
ENSG00000060688 SNRNP40 -592360 sc-eQTL 3.05e-01 0.0878 0.0854 0.683 ncMono L2
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 7.63e-01 0.0275 0.0912 0.683 ncMono L2
ENSG00000134644 PUM1 -361563 sc-eQTL 6.63e-01 0.0325 0.0745 0.683 ncMono L2
ENSG00000162511 LAPTM5 -53346 sc-eQTL 6.95e-01 -0.0266 0.0677 0.683 ncMono L2
ENSG00000162512 SDC3 -204330 sc-eQTL 2.39e-01 -0.0893 0.0757 0.683 ncMono L2
ENSG00000162517 PEF1 -940468 sc-eQTL 8.65e-01 -0.0148 0.087 0.683 ncMono L2
ENSG00000168528 SERINC2 -705137 sc-eQTL 6.36e-01 0.0393 0.0828 0.683 ncMono L2
ENSG00000284543 LINC01226 -801798 sc-eQTL 4.02e-01 -0.0694 0.0826 0.683 ncMono L2
ENSG00000287510 AL137857.1 -27265 sc-eQTL 3.16e-01 -0.086 0.0856 0.683 ncMono L2
ENSG00000060688 SNRNP40 -592360 sc-eQTL 1.46e-01 -0.132 0.0904 0.684 pDC L2
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 1.02e-01 0.163 0.099 0.684 pDC L2
ENSG00000134644 PUM1 -361563 sc-eQTL 3.64e-01 -0.0753 0.0826 0.684 pDC L2
ENSG00000162511 LAPTM5 -53346 sc-eQTL 8.11e-01 0.0185 0.077 0.684 pDC L2
ENSG00000162517 PEF1 -940468 sc-eQTL 8.05e-01 -0.0247 0.0999 0.684 pDC L2
ENSG00000168528 SERINC2 -705137 sc-eQTL 9.05e-01 -0.0111 0.0934 0.684 pDC L2
ENSG00000284543 LINC01226 -801798 sc-eQTL 7.18e-01 -0.0262 0.0725 0.684 pDC L2
ENSG00000287510 AL137857.1 -27265 sc-eQTL 9.29e-01 -0.00762 0.0853 0.684 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -592360 sc-eQTL 8.78e-01 -0.0146 0.0953 0.688 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 4.53e-01 0.0595 0.0792 0.688 B_Memory LOneK1K
ENSG00000134644 PUM1 -361563 sc-eQTL 2.68e-01 0.0778 0.0701 0.688 B_Memory LOneK1K
ENSG00000162510 MATN1 -19157 sc-eQTL 3.28e-01 0.0784 0.0799 0.688 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -53346 sc-eQTL 5.58e-02 0.096 0.0499 0.688 B_Memory LOneK1K
ENSG00000162517 PEF1 -940468 sc-eQTL 5.39e-01 0.0512 0.0833 0.688 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -14076 sc-eQTL 8.90e-01 0.00924 0.0666 0.688 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -27265 sc-eQTL 2.79e-01 -0.0786 0.0724 0.688 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -592360 sc-eQTL 2.73e-02 -0.191 0.0858 0.688 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 4.87e-03 -0.192 0.0673 0.688 B_Naive LOneK1K
ENSG00000134644 PUM1 -361563 sc-eQTL 7.45e-01 -0.0211 0.0649 0.688 B_Naive LOneK1K
ENSG00000162510 MATN1 -19157 sc-eQTL 9.07e-03 -0.162 0.0615 0.688 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -53346 sc-eQTL 8.74e-02 0.075 0.0437 0.688 B_Naive LOneK1K
ENSG00000162517 PEF1 -940468 sc-eQTL 4.16e-01 0.0654 0.0802 0.688 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -14076 sc-eQTL 1.13e-01 -0.09 0.0565 0.688 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -27265 sc-eQTL 9.69e-02 0.112 0.0671 0.688 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -592360 sc-eQTL 9.91e-01 0.000852 0.0731 0.688 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 8.15e-01 -0.0194 0.0828 0.688 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -361563 sc-eQTL 7.84e-01 0.0145 0.0528 0.688 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -53346 sc-eQTL 7.17e-01 0.0169 0.0464 0.688 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -204330 sc-eQTL 5.47e-01 -0.0571 0.0947 0.688 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -940468 sc-eQTL 8.59e-01 -0.0118 0.0666 0.688 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -705137 sc-eQTL 8.35e-01 -0.0203 0.0975 0.688 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -801798 sc-eQTL 9.60e-01 0.00401 0.0799 0.688 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -27265 sc-eQTL 2.29e-01 0.09 0.0746 0.688 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -592360 sc-eQTL 1.05e-01 0.132 0.0808 0.69 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 8.92e-01 0.0121 0.089 0.69 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -361563 sc-eQTL 3.95e-01 -0.062 0.0728 0.69 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -53346 sc-eQTL 1.20e-01 0.0904 0.058 0.69 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -204330 sc-eQTL 9.33e-02 -0.143 0.0846 0.69 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -940468 sc-eQTL 4.45e-01 -0.0592 0.0773 0.69 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -705137 sc-eQTL 8.68e-01 -0.0147 0.0883 0.69 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -801798 sc-eQTL 7.92e-01 0.0221 0.0838 0.69 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -27265 sc-eQTL 7.44e-01 -0.0275 0.0839 0.69 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -592360 sc-eQTL 5.61e-01 0.0526 0.0903 0.69 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -592554 sc-eQTL 5.35e-01 -0.0384 0.0617 0.69 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -361563 sc-eQTL 2.73e-01 0.0741 0.0674 0.69 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -53346 sc-eQTL 1.79e-01 0.101 0.0752 0.69 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -940468 sc-eQTL 8.79e-01 -0.00875 0.0574 0.69 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -14076 sc-eQTL 2.99e-01 -0.0905 0.0869 0.69 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -27265 sc-eQTL 3.19e-01 0.075 0.075 0.69 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162511 \N -53346 1.55e-05 2.32e-05 3.2e-06 1.21e-05 3.03e-06 8.76e-06 2.5e-05 3.5e-06 2.03e-05 9.54e-06 2.6e-05 9.35e-06 2.99e-05 7.98e-06 5.16e-06 1.18e-05 1.01e-05 1.51e-05 4.65e-06 5.19e-06 8.63e-06 2.19e-05 1.93e-05 6.62e-06 3.11e-05 5.34e-06 8.28e-06 8.35e-06 2.03e-05 1.69e-05 1.3e-05 1.65e-06 1.55e-06 5.08e-06 9.92e-06 4.48e-06 2.04e-06 2.67e-06 2.94e-06 2.6e-06 1.69e-06 2.19e-05 2.68e-06 4.08e-07 2.1e-06 3e-06 2.9e-06 1.46e-06 1.55e-06