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Genes within 1Mb (chr1:30703085:T:TGGATGATGGATGAC):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -593703 sc-eQTL 1.35e-01 0.122 0.0812 0.688 B L1
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 2.21e-01 0.08 0.0652 0.688 B L1
ENSG00000134644 PUM1 -362906 sc-eQTL 5.06e-01 0.0365 0.0548 0.688 B L1
ENSG00000162510 MATN1 -20500 sc-eQTL 5.21e-01 0.0371 0.0576 0.688 B L1
ENSG00000162511 LAPTM5 -54689 sc-eQTL 3.63e-01 -0.0411 0.0451 0.688 B L1
ENSG00000162517 PEF1 -941811 sc-eQTL 8.27e-01 0.0149 0.0682 0.688 B L1
ENSG00000186056 MATN1-AS1 -15419 sc-eQTL 2.50e-01 0.0609 0.0528 0.688 B L1
ENSG00000287510 AL137857.1 -28608 sc-eQTL 1.13e-01 0.0992 0.0623 0.688 B L1
ENSG00000060688 SNRNP40 -593703 sc-eQTL 3.24e-01 -0.069 0.0698 0.688 CD4T L1
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 4.85e-01 0.0382 0.0546 0.688 CD4T L1
ENSG00000134644 PUM1 -362906 sc-eQTL 6.87e-01 0.0197 0.0487 0.688 CD4T L1
ENSG00000162511 LAPTM5 -54689 sc-eQTL 7.83e-01 -0.0149 0.0539 0.688 CD4T L1
ENSG00000162517 PEF1 -941811 sc-eQTL 5.59e-01 0.033 0.0564 0.688 CD4T L1
ENSG00000186056 MATN1-AS1 -15419 sc-eQTL 7.34e-01 0.0164 0.0483 0.688 CD4T L1
ENSG00000287510 AL137857.1 -28608 sc-eQTL 5.26e-01 0.0367 0.0578 0.688 CD4T L1
ENSG00000060688 SNRNP40 -593703 sc-eQTL 9.44e-01 -0.00654 0.0936 0.688 CD8T L1
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 4.16e-01 -0.0506 0.0622 0.688 CD8T L1
ENSG00000134644 PUM1 -362906 sc-eQTL 6.11e-01 0.0279 0.0548 0.688 CD8T L1
ENSG00000162511 LAPTM5 -54689 sc-eQTL 1.74e-01 -0.0722 0.053 0.688 CD8T L1
ENSG00000162517 PEF1 -941811 sc-eQTL 3.07e-01 0.067 0.0654 0.688 CD8T L1
ENSG00000186056 MATN1-AS1 -15419 sc-eQTL 7.25e-01 0.022 0.0624 0.688 CD8T L1
ENSG00000287510 AL137857.1 -28608 sc-eQTL 9.53e-01 0.00466 0.0784 0.688 CD8T L1
ENSG00000060688 SNRNP40 -593703 sc-eQTL 1.29e-01 0.125 0.0823 0.682 DC L1
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 6.83e-01 -0.0401 0.098 0.682 DC L1
ENSG00000134644 PUM1 -362906 sc-eQTL 7.42e-02 -0.137 0.0762 0.682 DC L1
ENSG00000162511 LAPTM5 -54689 sc-eQTL 6.77e-01 -0.0229 0.0548 0.682 DC L1
ENSG00000162517 PEF1 -941811 sc-eQTL 6.59e-01 0.0393 0.0888 0.682 DC L1
ENSG00000168528 SERINC2 -706480 sc-eQTL 4.75e-01 0.0646 0.0903 0.682 DC L1
ENSG00000284543 LINC01226 -803141 sc-eQTL 9.90e-02 -0.0986 0.0595 0.682 DC L1
ENSG00000287510 AL137857.1 -28608 sc-eQTL 1.95e-01 0.112 0.0863 0.682 DC L1
ENSG00000060688 SNRNP40 -593703 sc-eQTL 9.40e-01 0.00486 0.0644 0.688 Mono L1
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 5.64e-01 0.0461 0.0798 0.688 Mono L1
ENSG00000134644 PUM1 -362906 sc-eQTL 4.54e-01 0.0384 0.0511 0.688 Mono L1
ENSG00000162511 LAPTM5 -54689 sc-eQTL 9.90e-01 -0.00062 0.0471 0.688 Mono L1
ENSG00000162512 SDC3 -205673 sc-eQTL 2.56e-01 0.103 0.0902 0.688 Mono L1
ENSG00000162517 PEF1 -941811 sc-eQTL 5.20e-01 0.0409 0.0634 0.688 Mono L1
ENSG00000168528 SERINC2 -706480 sc-eQTL 2.51e-01 0.112 0.0968 0.688 Mono L1
ENSG00000284543 LINC01226 -803141 sc-eQTL 2.49e-02 -0.191 0.0845 0.688 Mono L1
ENSG00000287510 AL137857.1 -28608 sc-eQTL 5.15e-01 -0.0487 0.0747 0.688 Mono L1
ENSG00000060688 SNRNP40 -593703 sc-eQTL 9.21e-01 0.00873 0.0884 0.687 NK L1
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 2.71e-01 0.0666 0.0604 0.687 NK L1
ENSG00000134644 PUM1 -362906 sc-eQTL 8.81e-01 -0.00951 0.0635 0.687 NK L1
ENSG00000162511 LAPTM5 -54689 sc-eQTL 2.17e-01 0.0902 0.0728 0.687 NK L1
ENSG00000162517 PEF1 -941811 sc-eQTL 3.73e-01 0.0475 0.0532 0.687 NK L1
ENSG00000186056 MATN1-AS1 -15419 sc-eQTL 4.32e-01 -0.0646 0.082 0.687 NK L1
ENSG00000287510 AL137857.1 -28608 sc-eQTL 7.82e-01 0.021 0.0758 0.687 NK L1
ENSG00000060688 SNRNP40 -593703 sc-eQTL 5.61e-01 0.0394 0.0676 0.688 Other_T L1
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 5.27e-01 -0.0458 0.0722 0.688 Other_T L1
ENSG00000134644 PUM1 -362906 sc-eQTL 2.43e-01 0.0759 0.0648 0.688 Other_T L1
ENSG00000162511 LAPTM5 -54689 sc-eQTL 1.58e-01 -0.0752 0.053 0.688 Other_T L1
ENSG00000162517 PEF1 -941811 sc-eQTL 6.62e-02 -0.13 0.0706 0.688 Other_T L1
ENSG00000186056 MATN1-AS1 -15419 sc-eQTL 5.99e-01 -0.0459 0.0872 0.688 Other_T L1
ENSG00000287510 AL137857.1 -28608 sc-eQTL 5.21e-02 0.176 0.0901 0.688 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -593703 sc-eQTL 5.16e-01 -0.0687 0.106 0.673 B_Activated L2
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 7.13e-01 -0.0392 0.107 0.673 B_Activated L2
ENSG00000134644 PUM1 -362906 sc-eQTL 9.18e-01 0.0102 0.0991 0.673 B_Activated L2
ENSG00000162510 MATN1 -20500 sc-eQTL 3.06e-02 0.186 0.0854 0.673 B_Activated L2
ENSG00000162511 LAPTM5 -54689 sc-eQTL 5.63e-01 0.0349 0.0603 0.673 B_Activated L2
ENSG00000162517 PEF1 -941811 sc-eQTL 8.87e-01 -0.0147 0.103 0.673 B_Activated L2
ENSG00000186056 MATN1-AS1 -15419 sc-eQTL 8.49e-01 -0.0185 0.0975 0.673 B_Activated L2
ENSG00000287510 AL137857.1 -28608 sc-eQTL 1.44e-02 0.21 0.0848 0.673 B_Activated L2
ENSG00000060688 SNRNP40 -593703 sc-eQTL 9.77e-01 -0.0029 0.1 0.687 B_Intermediate L2
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 5.13e-01 0.0545 0.0832 0.687 B_Intermediate L2
ENSG00000134644 PUM1 -362906 sc-eQTL 6.01e-01 0.0412 0.0786 0.687 B_Intermediate L2
ENSG00000162510 MATN1 -20500 sc-eQTL 7.74e-02 -0.144 0.0812 0.687 B_Intermediate L2
ENSG00000162511 LAPTM5 -54689 sc-eQTL 9.72e-01 -0.00179 0.0502 0.687 B_Intermediate L2
ENSG00000162517 PEF1 -941811 sc-eQTL 6.42e-01 0.0433 0.0932 0.687 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -15419 sc-eQTL 8.14e-01 -0.0166 0.0705 0.687 B_Intermediate L2
ENSG00000287510 AL137857.1 -28608 sc-eQTL 2.09e-01 0.099 0.0786 0.687 B_Intermediate L2
ENSG00000060688 SNRNP40 -593703 sc-eQTL 3.94e-01 0.0832 0.0973 0.688 B_Memory L2
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 6.18e-01 -0.0449 0.0897 0.688 B_Memory L2
ENSG00000134644 PUM1 -362906 sc-eQTL 2.74e-01 -0.0854 0.0779 0.688 B_Memory L2
ENSG00000162510 MATN1 -20500 sc-eQTL 1.52e-01 -0.107 0.0744 0.688 B_Memory L2
ENSG00000162511 LAPTM5 -54689 sc-eQTL 7.29e-01 -0.023 0.0662 0.688 B_Memory L2
ENSG00000162517 PEF1 -941811 sc-eQTL 9.83e-01 -0.00185 0.0885 0.688 B_Memory L2
ENSG00000186056 MATN1-AS1 -15419 sc-eQTL 9.81e-01 0.00186 0.0758 0.688 B_Memory L2
ENSG00000287510 AL137857.1 -28608 sc-eQTL 3.49e-01 -0.0832 0.0886 0.688 B_Memory L2
ENSG00000060688 SNRNP40 -593703 sc-eQTL 3.91e-01 0.0769 0.0894 0.688 B_Naive1 L2
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 9.02e-01 -0.00952 0.0773 0.688 B_Naive1 L2
ENSG00000134644 PUM1 -362906 sc-eQTL 6.09e-02 0.127 0.0676 0.688 B_Naive1 L2
ENSG00000162510 MATN1 -20500 sc-eQTL 4.73e-01 0.0496 0.0691 0.688 B_Naive1 L2
ENSG00000162511 LAPTM5 -54689 sc-eQTL 5.43e-01 -0.0281 0.0462 0.688 B_Naive1 L2
ENSG00000162517 PEF1 -941811 sc-eQTL 8.09e-01 -0.0197 0.0814 0.688 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -15419 sc-eQTL 2.83e-01 0.0651 0.0605 0.688 B_Naive1 L2
ENSG00000287510 AL137857.1 -28608 sc-eQTL 9.62e-01 0.00358 0.075 0.688 B_Naive1 L2
ENSG00000060688 SNRNP40 -593703 sc-eQTL 6.85e-02 0.173 0.0945 0.689 B_Naive2 L2
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 7.72e-04 0.261 0.0765 0.689 B_Naive2 L2
ENSG00000134644 PUM1 -362906 sc-eQTL 7.02e-01 -0.0294 0.0769 0.689 B_Naive2 L2
ENSG00000162510 MATN1 -20500 sc-eQTL 6.38e-01 0.0348 0.0738 0.689 B_Naive2 L2
ENSG00000162511 LAPTM5 -54689 sc-eQTL 6.40e-01 -0.0235 0.0501 0.689 B_Naive2 L2
ENSG00000162517 PEF1 -941811 sc-eQTL 1.89e-01 0.12 0.0909 0.689 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -15419 sc-eQTL 3.93e-01 0.0625 0.0729 0.689 B_Naive2 L2
ENSG00000287510 AL137857.1 -28608 sc-eQTL 1.88e-01 0.104 0.0786 0.689 B_Naive2 L2
ENSG00000060688 SNRNP40 -593703 sc-eQTL 8.28e-01 -0.0209 0.0959 0.689 CD4_CTL L2
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 6.67e-01 -0.0407 0.0943 0.689 CD4_CTL L2
ENSG00000134644 PUM1 -362906 sc-eQTL 8.43e-01 -0.0183 0.0925 0.689 CD4_CTL L2
ENSG00000162511 LAPTM5 -54689 sc-eQTL 9.04e-01 -0.00996 0.0825 0.689 CD4_CTL L2
ENSG00000162517 PEF1 -941811 sc-eQTL 8.62e-01 -0.0148 0.0846 0.689 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -15419 sc-eQTL 2.43e-01 -0.105 0.0899 0.689 CD4_CTL L2
ENSG00000287510 AL137857.1 -28608 sc-eQTL 2.08e-01 -0.1 0.0793 0.689 CD4_CTL L2
ENSG00000060688 SNRNP40 -593703 sc-eQTL 7.38e-01 0.0247 0.0738 0.688 CD4_Naive L2
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 1.68e-01 0.0902 0.0651 0.688 CD4_Naive L2
ENSG00000134644 PUM1 -362906 sc-eQTL 7.33e-01 0.0179 0.0522 0.688 CD4_Naive L2
ENSG00000162511 LAPTM5 -54689 sc-eQTL 8.58e-01 0.01 0.056 0.688 CD4_Naive L2
ENSG00000162517 PEF1 -941811 sc-eQTL 4.21e-01 0.0494 0.0613 0.688 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -15419 sc-eQTL 1.04e-01 0.0921 0.0565 0.688 CD4_Naive L2
ENSG00000287510 AL137857.1 -28608 sc-eQTL 8.65e-01 -0.0111 0.0653 0.688 CD4_Naive L2
ENSG00000060688 SNRNP40 -593703 sc-eQTL 1.16e-01 -0.145 0.0921 0.688 CD4_TCM L2
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 6.60e-01 -0.0329 0.0746 0.688 CD4_TCM L2
ENSG00000134644 PUM1 -362906 sc-eQTL 7.81e-01 0.0184 0.0661 0.688 CD4_TCM L2
ENSG00000162511 LAPTM5 -54689 sc-eQTL 2.26e-01 -0.0664 0.0546 0.688 CD4_TCM L2
ENSG00000162517 PEF1 -941811 sc-eQTL 7.29e-01 0.0255 0.0735 0.688 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -15419 sc-eQTL 3.72e-01 -0.0621 0.0694 0.688 CD4_TCM L2
ENSG00000287510 AL137857.1 -28608 sc-eQTL 2.53e-01 0.0886 0.0772 0.688 CD4_TCM L2
ENSG00000060688 SNRNP40 -593703 sc-eQTL 4.62e-01 -0.0673 0.0913 0.688 CD4_TEM L2
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 3.32e-01 -0.0846 0.0869 0.688 CD4_TEM L2
ENSG00000134644 PUM1 -362906 sc-eQTL 4.46e-01 0.0554 0.0725 0.688 CD4_TEM L2
ENSG00000162511 LAPTM5 -54689 sc-eQTL 6.40e-01 0.0344 0.0734 0.688 CD4_TEM L2
ENSG00000162517 PEF1 -941811 sc-eQTL 9.82e-01 0.00183 0.0822 0.688 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -15419 sc-eQTL 9.84e-01 -0.00171 0.0859 0.688 CD4_TEM L2
ENSG00000287510 AL137857.1 -28608 sc-eQTL 1.58e-01 -0.119 0.0842 0.688 CD4_TEM L2
ENSG00000060688 SNRNP40 -593703 sc-eQTL 8.95e-01 0.0134 0.101 0.688 CD8_CTL L2
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 3.48e-01 0.073 0.0776 0.688 CD8_CTL L2
ENSG00000134644 PUM1 -362906 sc-eQTL 2.06e-01 -0.0955 0.0753 0.688 CD8_CTL L2
ENSG00000162511 LAPTM5 -54689 sc-eQTL 9.59e-01 0.00433 0.0837 0.688 CD8_CTL L2
ENSG00000162517 PEF1 -941811 sc-eQTL 8.22e-01 0.0164 0.0728 0.688 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -15419 sc-eQTL 2.56e-01 0.0999 0.0877 0.688 CD8_CTL L2
ENSG00000287510 AL137857.1 -28608 sc-eQTL 6.36e-01 0.0392 0.0827 0.688 CD8_CTL L2
ENSG00000060688 SNRNP40 -593703 sc-eQTL 5.11e-01 -0.0604 0.0917 0.688 CD8_Naive L2
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 1.01e-01 -0.13 0.0786 0.688 CD8_Naive L2
ENSG00000134644 PUM1 -362906 sc-eQTL 4.80e-02 0.125 0.0631 0.688 CD8_Naive L2
ENSG00000162511 LAPTM5 -54689 sc-eQTL 2.96e-01 -0.0638 0.0609 0.688 CD8_Naive L2
ENSG00000162517 PEF1 -941811 sc-eQTL 5.34e-01 0.0528 0.0848 0.688 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -15419 sc-eQTL 9.75e-01 -0.00236 0.0762 0.688 CD8_Naive L2
ENSG00000287510 AL137857.1 -28608 sc-eQTL 1.29e-01 -0.126 0.0825 0.688 CD8_Naive L2
ENSG00000060688 SNRNP40 -593703 sc-eQTL 3.10e-01 -0.104 0.102 0.694 CD8_TCM L2
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 7.12e-01 -0.0347 0.0941 0.694 CD8_TCM L2
ENSG00000134644 PUM1 -362906 sc-eQTL 4.39e-01 0.0686 0.0883 0.694 CD8_TCM L2
ENSG00000162511 LAPTM5 -54689 sc-eQTL 6.33e-01 0.0443 0.0925 0.694 CD8_TCM L2
ENSG00000162517 PEF1 -941811 sc-eQTL 2.66e-01 0.105 0.0943 0.694 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -15419 sc-eQTL 5.33e-01 -0.0535 0.0856 0.694 CD8_TCM L2
ENSG00000287510 AL137857.1 -28608 sc-eQTL 1.75e-01 -0.117 0.0862 0.694 CD8_TCM L2
ENSG00000060688 SNRNP40 -593703 sc-eQTL 3.30e-01 0.0962 0.0984 0.689 CD8_TEM L2
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 6.74e-01 -0.0398 0.0945 0.689 CD8_TEM L2
ENSG00000134644 PUM1 -362906 sc-eQTL 9.71e-01 -0.00348 0.0967 0.689 CD8_TEM L2
ENSG00000162511 LAPTM5 -54689 sc-eQTL 9.57e-01 0.00489 0.0909 0.689 CD8_TEM L2
ENSG00000162517 PEF1 -941811 sc-eQTL 5.03e-01 0.0573 0.0855 0.689 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -15419 sc-eQTL 5.76e-02 0.179 0.0934 0.689 CD8_TEM L2
ENSG00000287510 AL137857.1 -28608 sc-eQTL 1.24e-01 0.131 0.0848 0.689 CD8_TEM L2
ENSG00000060688 SNRNP40 -593703 sc-eQTL 7.06e-01 0.0372 0.0985 0.69 MAIT L2
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 1.43e-01 -0.128 0.0869 0.69 MAIT L2
ENSG00000134644 PUM1 -362906 sc-eQTL 3.44e-01 0.0792 0.0835 0.69 MAIT L2
ENSG00000162511 LAPTM5 -54689 sc-eQTL 9.72e-01 0.00281 0.079 0.69 MAIT L2
ENSG00000162517 PEF1 -941811 sc-eQTL 4.26e-01 -0.0691 0.0866 0.69 MAIT L2
ENSG00000186056 MATN1-AS1 -15419 sc-eQTL 3.79e-01 -0.0774 0.0878 0.69 MAIT L2
ENSG00000287510 AL137857.1 -28608 sc-eQTL 5.06e-02 0.177 0.0898 0.69 MAIT L2
ENSG00000060688 SNRNP40 -593703 sc-eQTL 1.97e-01 -0.127 0.098 0.687 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 1.10e-01 0.133 0.0826 0.687 NK_CD56bright L2
ENSG00000134644 PUM1 -362906 sc-eQTL 8.41e-01 0.0175 0.0873 0.687 NK_CD56bright L2
ENSG00000162511 LAPTM5 -54689 sc-eQTL 7.50e-01 0.0274 0.0861 0.687 NK_CD56bright L2
ENSG00000162517 PEF1 -941811 sc-eQTL 7.48e-01 0.0269 0.0836 0.687 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -15419 sc-eQTL 2.97e-02 0.187 0.0855 0.687 NK_CD56bright L2
ENSG00000287510 AL137857.1 -28608 sc-eQTL 5.05e-01 0.0568 0.0852 0.687 NK_CD56bright L2
ENSG00000060688 SNRNP40 -593703 sc-eQTL 7.71e-01 0.0273 0.0934 0.685 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 1.01e-01 0.113 0.0687 0.685 NK_CD56dim L2
ENSG00000134644 PUM1 -362906 sc-eQTL 6.56e-01 0.0316 0.0709 0.685 NK_CD56dim L2
ENSG00000162511 LAPTM5 -54689 sc-eQTL 2.49e-01 0.0871 0.0754 0.685 NK_CD56dim L2
ENSG00000162517 PEF1 -941811 sc-eQTL 1.27e-01 0.103 0.0669 0.685 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -15419 sc-eQTL 3.44e-01 -0.0897 0.0945 0.685 NK_CD56dim L2
ENSG00000287510 AL137857.1 -28608 sc-eQTL 6.33e-01 -0.0373 0.0781 0.685 NK_CD56dim L2
ENSG00000060688 SNRNP40 -593703 sc-eQTL 7.53e-01 0.0312 0.0989 0.683 NK_HLA L2
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 2.39e-01 -0.104 0.088 0.683 NK_HLA L2
ENSG00000134644 PUM1 -362906 sc-eQTL 9.54e-02 -0.143 0.0855 0.683 NK_HLA L2
ENSG00000162511 LAPTM5 -54689 sc-eQTL 3.10e-01 -0.0833 0.0819 0.683 NK_HLA L2
ENSG00000162517 PEF1 -941811 sc-eQTL 9.74e-01 0.003 0.0926 0.683 NK_HLA L2
ENSG00000186056 MATN1-AS1 -15419 sc-eQTL 3.98e-01 -0.0739 0.0872 0.683 NK_HLA L2
ENSG00000287510 AL137857.1 -28608 sc-eQTL 2.44e-01 0.0985 0.0842 0.683 NK_HLA L2
ENSG00000060688 SNRNP40 -593703 sc-eQTL 2.79e-01 0.0993 0.0914 0.685 NK_cytokine L2
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 6.65e-01 -0.0311 0.0715 0.685 NK_cytokine L2
ENSG00000134644 PUM1 -362906 sc-eQTL 5.27e-01 -0.0489 0.0773 0.685 NK_cytokine L2
ENSG00000162511 LAPTM5 -54689 sc-eQTL 4.56e-01 0.0635 0.0851 0.685 NK_cytokine L2
ENSG00000162517 PEF1 -941811 sc-eQTL 7.04e-01 -0.0277 0.0726 0.685 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -15419 sc-eQTL 5.38e-01 -0.0557 0.0902 0.685 NK_cytokine L2
ENSG00000287510 AL137857.1 -28608 sc-eQTL 3.57e-01 0.0775 0.0839 0.685 NK_cytokine L2
ENSG00000060688 SNRNP40 -593703 sc-eQTL 2.86e-01 0.121 0.113 0.685 PB L2
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 7.99e-01 -0.0336 0.132 0.685 PB L2
ENSG00000134644 PUM1 -362906 sc-eQTL 5.12e-01 0.0751 0.114 0.685 PB L2
ENSG00000162510 MATN1 -20500 sc-eQTL 4.13e-01 -0.0874 0.106 0.685 PB L2
ENSG00000162511 LAPTM5 -54689 sc-eQTL 5.12e-01 -0.0501 0.076 0.685 PB L2
ENSG00000162517 PEF1 -941811 sc-eQTL 9.04e-01 0.0142 0.117 0.685 PB L2
ENSG00000186056 MATN1-AS1 -15419 sc-eQTL 1.55e-01 -0.148 0.103 0.685 PB L2
ENSG00000287510 AL137857.1 -28608 sc-eQTL 2.34e-01 0.132 0.11 0.685 PB L2
ENSG00000060688 SNRNP40 -593703 sc-eQTL 1.83e-01 0.0974 0.0729 0.691 Pro_T L2
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 3.64e-01 0.0843 0.0927 0.691 Pro_T L2
ENSG00000134644 PUM1 -362906 sc-eQTL 1.68e-01 0.119 0.0863 0.691 Pro_T L2
ENSG00000162511 LAPTM5 -54689 sc-eQTL 2.22e-01 -0.0759 0.062 0.691 Pro_T L2
ENSG00000162517 PEF1 -941811 sc-eQTL 6.93e-01 -0.0361 0.0912 0.691 Pro_T L2
ENSG00000186056 MATN1-AS1 -15419 sc-eQTL 6.39e-01 -0.0408 0.0868 0.691 Pro_T L2
ENSG00000287510 AL137857.1 -28608 sc-eQTL 1.76e-01 0.108 0.0796 0.691 Pro_T L2
ENSG00000060688 SNRNP40 -593703 sc-eQTL 3.54e-01 0.088 0.0948 0.688 Treg L2
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 6.44e-01 -0.0425 0.0919 0.688 Treg L2
ENSG00000134644 PUM1 -362906 sc-eQTL 3.56e-01 -0.0679 0.0734 0.688 Treg L2
ENSG00000162511 LAPTM5 -54689 sc-eQTL 9.59e-01 0.00428 0.0842 0.688 Treg L2
ENSG00000162517 PEF1 -941811 sc-eQTL 8.95e-01 0.012 0.091 0.688 Treg L2
ENSG00000186056 MATN1-AS1 -15419 sc-eQTL 1.27e-01 -0.131 0.0853 0.688 Treg L2
ENSG00000287510 AL137857.1 -28608 sc-eQTL 4.99e-01 0.058 0.0856 0.688 Treg L2
ENSG00000060688 SNRNP40 -593703 sc-eQTL 1.42e-01 0.144 0.0976 0.678 cDC L2
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 7.38e-01 -0.0356 0.106 0.678 cDC L2
ENSG00000134644 PUM1 -362906 sc-eQTL 3.04e-02 -0.197 0.0901 0.678 cDC L2
ENSG00000162511 LAPTM5 -54689 sc-eQTL 5.50e-01 0.0383 0.0639 0.678 cDC L2
ENSG00000162517 PEF1 -941811 sc-eQTL 8.12e-01 0.022 0.0927 0.678 cDC L2
ENSG00000168528 SERINC2 -706480 sc-eQTL 4.42e-01 0.0632 0.082 0.678 cDC L2
ENSG00000284543 LINC01226 -803141 sc-eQTL 9.32e-02 -0.135 0.0801 0.678 cDC L2
ENSG00000287510 AL137857.1 -28608 sc-eQTL 1.05e-01 0.14 0.0863 0.678 cDC L2
ENSG00000060688 SNRNP40 -593703 sc-eQTL 5.93e-01 0.0414 0.0775 0.688 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 5.21e-01 0.0555 0.0864 0.688 cMono_IL1B L2
ENSG00000134644 PUM1 -362906 sc-eQTL 7.29e-01 -0.0203 0.0585 0.688 cMono_IL1B L2
ENSG00000162511 LAPTM5 -54689 sc-eQTL 6.33e-01 0.0246 0.0513 0.688 cMono_IL1B L2
ENSG00000162512 SDC3 -205673 sc-eQTL 1.84e-01 0.128 0.0964 0.688 cMono_IL1B L2
ENSG00000162517 PEF1 -941811 sc-eQTL 4.56e-01 -0.059 0.0789 0.688 cMono_IL1B L2
ENSG00000168528 SERINC2 -706480 sc-eQTL 4.11e-01 0.0806 0.0978 0.688 cMono_IL1B L2
ENSG00000284543 LINC01226 -803141 sc-eQTL 3.05e-02 -0.186 0.0856 0.688 cMono_IL1B L2
ENSG00000287510 AL137857.1 -28608 sc-eQTL 5.68e-01 -0.0461 0.0807 0.688 cMono_IL1B L2
ENSG00000060688 SNRNP40 -593703 sc-eQTL 8.93e-01 0.011 0.0816 0.688 cMono_S100A L2
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 3.59e-01 -0.0885 0.0962 0.688 cMono_S100A L2
ENSG00000134644 PUM1 -362906 sc-eQTL 2.05e-01 0.0883 0.0694 0.688 cMono_S100A L2
ENSG00000162511 LAPTM5 -54689 sc-eQTL 6.55e-01 0.0239 0.0535 0.688 cMono_S100A L2
ENSG00000162512 SDC3 -205673 sc-eQTL 3.58e-01 0.085 0.0923 0.688 cMono_S100A L2
ENSG00000162517 PEF1 -941811 sc-eQTL 4.83e-01 0.0587 0.0835 0.688 cMono_S100A L2
ENSG00000168528 SERINC2 -706480 sc-eQTL 2.98e-01 0.102 0.0977 0.688 cMono_S100A L2
ENSG00000284543 LINC01226 -803141 sc-eQTL 8.29e-02 -0.138 0.079 0.688 cMono_S100A L2
ENSG00000287510 AL137857.1 -28608 sc-eQTL 8.33e-01 0.0169 0.0799 0.688 cMono_S100A L2
ENSG00000060688 SNRNP40 -593703 sc-eQTL 6.11e-01 -0.0629 0.123 0.694 gdT L2
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 5.66e-01 -0.061 0.106 0.694 gdT L2
ENSG00000134644 PUM1 -362906 sc-eQTL 6.78e-01 -0.0454 0.109 0.694 gdT L2
ENSG00000162511 LAPTM5 -54689 sc-eQTL 5.27e-01 0.0752 0.119 0.694 gdT L2
ENSG00000162517 PEF1 -941811 sc-eQTL 7.57e-01 -0.0337 0.109 0.694 gdT L2
ENSG00000186056 MATN1-AS1 -15419 sc-eQTL 6.16e-01 0.0551 0.11 0.694 gdT L2
ENSG00000287510 AL137857.1 -28608 sc-eQTL 6.93e-01 0.042 0.106 0.694 gdT L2
ENSG00000060688 SNRNP40 -593703 sc-eQTL 8.05e-01 0.0224 0.0904 0.682 intMono L2
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 1.51e-01 0.14 0.0967 0.682 intMono L2
ENSG00000134644 PUM1 -362906 sc-eQTL 2.56e-01 0.0936 0.0822 0.682 intMono L2
ENSG00000162511 LAPTM5 -54689 sc-eQTL 2.39e-01 -0.0762 0.0645 0.682 intMono L2
ENSG00000162512 SDC3 -205673 sc-eQTL 4.30e-01 0.0699 0.0885 0.682 intMono L2
ENSG00000162517 PEF1 -941811 sc-eQTL 1.82e-01 0.124 0.0927 0.682 intMono L2
ENSG00000168528 SERINC2 -706480 sc-eQTL 8.16e-02 0.161 0.092 0.682 intMono L2
ENSG00000284543 LINC01226 -803141 sc-eQTL 2.68e-01 -0.0974 0.0876 0.682 intMono L2
ENSG00000287510 AL137857.1 -28608 sc-eQTL 8.41e-01 -0.0177 0.0879 0.682 intMono L2
ENSG00000060688 SNRNP40 -593703 sc-eQTL 1.60e-01 -0.119 0.0845 0.688 ncMono L2
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 1.37e-01 0.134 0.09 0.688 ncMono L2
ENSG00000134644 PUM1 -362906 sc-eQTL 1.55e-01 0.105 0.0736 0.688 ncMono L2
ENSG00000162511 LAPTM5 -54689 sc-eQTL 3.62e-01 -0.0613 0.067 0.688 ncMono L2
ENSG00000162512 SDC3 -205673 sc-eQTL 1.18e-01 0.117 0.0748 0.688 ncMono L2
ENSG00000162517 PEF1 -941811 sc-eQTL 8.95e-02 0.146 0.0857 0.688 ncMono L2
ENSG00000168528 SERINC2 -706480 sc-eQTL 4.18e-01 0.0666 0.082 0.688 ncMono L2
ENSG00000284543 LINC01226 -803141 sc-eQTL 5.09e-01 0.0542 0.082 0.688 ncMono L2
ENSG00000287510 AL137857.1 -28608 sc-eQTL 8.98e-01 0.011 0.0851 0.688 ncMono L2
ENSG00000060688 SNRNP40 -593703 sc-eQTL 5.44e-01 0.0577 0.095 0.686 pDC L2
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 2.43e-01 -0.122 0.104 0.686 pDC L2
ENSG00000134644 PUM1 -362906 sc-eQTL 9.96e-01 -0.000473 0.0866 0.686 pDC L2
ENSG00000162511 LAPTM5 -54689 sc-eQTL 2.52e-01 -0.0923 0.0801 0.686 pDC L2
ENSG00000162517 PEF1 -941811 sc-eQTL 4.26e-01 0.0831 0.104 0.686 pDC L2
ENSG00000168528 SERINC2 -706480 sc-eQTL 9.01e-01 0.0122 0.0976 0.686 pDC L2
ENSG00000284543 LINC01226 -803141 sc-eQTL 1.81e-01 -0.101 0.0753 0.686 pDC L2
ENSG00000287510 AL137857.1 -28608 sc-eQTL 9.87e-01 0.00141 0.0891 0.686 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -593703 sc-eQTL 1.00e+00 -4.63e-05 0.0949 0.688 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 8.45e-01 0.0154 0.079 0.688 B_Memory LOneK1K
ENSG00000134644 PUM1 -362906 sc-eQTL 4.76e-01 -0.0499 0.0699 0.688 B_Memory LOneK1K
ENSG00000162510 MATN1 -20500 sc-eQTL 1.86e-01 -0.105 0.0795 0.688 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -54689 sc-eQTL 4.55e-01 -0.0375 0.0501 0.688 B_Memory LOneK1K
ENSG00000162517 PEF1 -941811 sc-eQTL 9.41e-01 0.00611 0.0831 0.688 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -15419 sc-eQTL 8.41e-01 -0.0133 0.0663 0.688 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -28608 sc-eQTL 1.67e-01 0.0997 0.072 0.688 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -593703 sc-eQTL 9.49e-02 0.145 0.0867 0.688 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 1.22e-01 0.107 0.0686 0.688 B_Naive LOneK1K
ENSG00000134644 PUM1 -362906 sc-eQTL 3.52e-01 0.0608 0.0651 0.688 B_Naive LOneK1K
ENSG00000162510 MATN1 -20500 sc-eQTL 3.09e-01 0.0639 0.0627 0.688 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -54689 sc-eQTL 4.22e-01 -0.0355 0.0442 0.688 B_Naive LOneK1K
ENSG00000162517 PEF1 -941811 sc-eQTL 6.12e-01 0.0411 0.0807 0.688 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -15419 sc-eQTL 2.79e-01 0.0618 0.057 0.688 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -28608 sc-eQTL 7.37e-01 0.0228 0.0679 0.688 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -593703 sc-eQTL 4.40e-01 0.057 0.0737 0.688 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 9.04e-01 0.0101 0.0835 0.688 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -362906 sc-eQTL 5.50e-01 0.0319 0.0533 0.688 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -54689 sc-eQTL 5.72e-01 0.0265 0.0468 0.688 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -205673 sc-eQTL 1.41e-01 0.141 0.0951 0.688 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -941811 sc-eQTL 6.61e-01 -0.0295 0.0672 0.688 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -706480 sc-eQTL 2.67e-01 0.109 0.098 0.688 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -803141 sc-eQTL 1.06e-02 -0.205 0.0794 0.688 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -28608 sc-eQTL 6.60e-01 -0.0333 0.0754 0.688 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -593703 sc-eQTL 1.63e-01 -0.112 0.0799 0.685 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 1.09e-01 0.14 0.0873 0.685 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -362906 sc-eQTL 2.23e-01 0.0876 0.0717 0.685 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -54689 sc-eQTL 2.40e-01 -0.0676 0.0574 0.685 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -205673 sc-eQTL 6.08e-01 0.0431 0.084 0.685 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -941811 sc-eQTL 2.27e-02 0.173 0.0755 0.685 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -706480 sc-eQTL 1.95e-01 0.113 0.0868 0.685 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -803141 sc-eQTL 4.88e-01 -0.0574 0.0827 0.685 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -28608 sc-eQTL 7.50e-01 -0.0265 0.0828 0.685 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -593703 sc-eQTL 6.19e-01 0.0444 0.0891 0.685 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -593897 sc-eQTL 5.60e-01 0.0355 0.0609 0.685 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -362906 sc-eQTL 8.43e-01 -0.0133 0.0667 0.685 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -54689 sc-eQTL 3.50e-01 0.0697 0.0744 0.685 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -941811 sc-eQTL 5.07e-01 0.0376 0.0566 0.685 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -15419 sc-eQTL 2.36e-01 -0.102 0.0857 0.685 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -28608 sc-eQTL 3.73e-01 0.0661 0.0741 0.685 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162510 MATN1 -20500 eQTL 0.000362 -0.0746 0.0208 0.00966 0.00817 0.312
ENSG00000186056 MATN1-AS1 -15419 eQTL 7.47e-05 0.053 0.0133 0.0 0.0 0.312

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina