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Genes within 1Mb (chr1:30702724:T:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -594064 sc-eQTL 4.34e-01 0.0591 0.0754 0.509 B L1
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 3.33e-01 0.0586 0.0604 0.509 B L1
ENSG00000134644 PUM1 -363267 sc-eQTL 9.52e-01 0.00304 0.0507 0.509 B L1
ENSG00000162510 MATN1 -20861 sc-eQTL 3.95e-03 0.152 0.0523 0.509 B L1
ENSG00000162511 LAPTM5 -55050 sc-eQTL 2.61e-01 -0.047 0.0417 0.509 B L1
ENSG00000162517 PEF1 -942172 sc-eQTL 5.29e-01 -0.0398 0.063 0.509 B L1
ENSG00000186056 MATN1-AS1 -15780 sc-eQTL 6.72e-01 0.0208 0.0489 0.509 B L1
ENSG00000287510 AL137857.1 -28969 sc-eQTL 8.15e-01 -0.0136 0.0579 0.509 B L1
ENSG00000060688 SNRNP40 -594064 sc-eQTL 5.27e-01 -0.0408 0.0644 0.509 CD4T L1
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 9.33e-01 0.00427 0.0504 0.509 CD4T L1
ENSG00000134644 PUM1 -363267 sc-eQTL 4.36e-01 0.0349 0.0448 0.509 CD4T L1
ENSG00000162511 LAPTM5 -55050 sc-eQTL 6.85e-01 -0.0202 0.0497 0.509 CD4T L1
ENSG00000162517 PEF1 -942172 sc-eQTL 8.61e-01 0.00912 0.052 0.509 CD4T L1
ENSG00000186056 MATN1-AS1 -15780 sc-eQTL 4.61e-01 -0.0328 0.0444 0.509 CD4T L1
ENSG00000287510 AL137857.1 -28969 sc-eQTL 5.41e-01 0.0326 0.0532 0.509 CD4T L1
ENSG00000060688 SNRNP40 -594064 sc-eQTL 5.89e-01 -0.046 0.085 0.509 CD8T L1
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 4.26e-01 0.0451 0.0565 0.509 CD8T L1
ENSG00000134644 PUM1 -363267 sc-eQTL 5.64e-01 0.0287 0.0498 0.509 CD8T L1
ENSG00000162511 LAPTM5 -55050 sc-eQTL 9.37e-01 -0.0038 0.0484 0.509 CD8T L1
ENSG00000162517 PEF1 -942172 sc-eQTL 4.40e-01 0.0461 0.0595 0.509 CD8T L1
ENSG00000186056 MATN1-AS1 -15780 sc-eQTL 6.51e-01 -0.0257 0.0567 0.509 CD8T L1
ENSG00000287510 AL137857.1 -28969 sc-eQTL 9.24e-01 0.00684 0.0712 0.509 CD8T L1
ENSG00000060688 SNRNP40 -594064 sc-eQTL 1.24e-01 0.121 0.0782 0.5 DC L1
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 7.47e-01 0.0301 0.0932 0.5 DC L1
ENSG00000134644 PUM1 -363267 sc-eQTL 2.37e-01 -0.0863 0.0727 0.5 DC L1
ENSG00000162511 LAPTM5 -55050 sc-eQTL 1.31e-01 -0.0787 0.0518 0.5 DC L1
ENSG00000162517 PEF1 -942172 sc-eQTL 8.29e-01 0.0182 0.0845 0.5 DC L1
ENSG00000168528 SERINC2 -706841 sc-eQTL 9.28e-01 0.00778 0.0859 0.5 DC L1
ENSG00000284543 LINC01226 -803502 sc-eQTL 6.18e-01 -0.0284 0.0569 0.5 DC L1
ENSG00000287510 AL137857.1 -28969 sc-eQTL 1.25e-01 0.126 0.0819 0.5 DC L1
ENSG00000060688 SNRNP40 -594064 sc-eQTL 4.90e-01 -0.0412 0.0596 0.509 Mono L1
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 2.70e-01 0.0816 0.0738 0.509 Mono L1
ENSG00000134644 PUM1 -363267 sc-eQTL 6.86e-01 -0.0192 0.0474 0.509 Mono L1
ENSG00000162511 LAPTM5 -55050 sc-eQTL 9.38e-01 -0.0034 0.0436 0.509 Mono L1
ENSG00000162512 SDC3 -206034 sc-eQTL 4.94e-01 0.0574 0.0838 0.509 Mono L1
ENSG00000162517 PEF1 -942172 sc-eQTL 1.94e-01 0.0763 0.0586 0.509 Mono L1
ENSG00000168528 SERINC2 -706841 sc-eQTL 3.48e-01 0.0845 0.0898 0.509 Mono L1
ENSG00000284543 LINC01226 -803502 sc-eQTL 2.30e-01 -0.0952 0.079 0.509 Mono L1
ENSG00000287510 AL137857.1 -28969 sc-eQTL 9.23e-01 -0.00674 0.0693 0.509 Mono L1
ENSG00000060688 SNRNP40 -594064 sc-eQTL 1.40e-01 -0.122 0.0822 0.509 NK L1
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 1.22e-01 0.0873 0.0563 0.509 NK L1
ENSG00000134644 PUM1 -363267 sc-eQTL 4.73e-01 -0.0426 0.0593 0.509 NK L1
ENSG00000162511 LAPTM5 -55050 sc-eQTL 7.28e-01 0.0238 0.0683 0.509 NK L1
ENSG00000162517 PEF1 -942172 sc-eQTL 9.94e-01 -0.000376 0.0499 0.509 NK L1
ENSG00000186056 MATN1-AS1 -15780 sc-eQTL 2.56e-01 -0.0871 0.0765 0.509 NK L1
ENSG00000287510 AL137857.1 -28969 sc-eQTL 6.48e-01 -0.0324 0.0708 0.509 NK L1
ENSG00000060688 SNRNP40 -594064 sc-eQTL 6.20e-01 -0.0309 0.0624 0.509 Other_T L1
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 9.75e-01 0.00207 0.0667 0.509 Other_T L1
ENSG00000134644 PUM1 -363267 sc-eQTL 2.52e-02 0.134 0.0593 0.509 Other_T L1
ENSG00000162511 LAPTM5 -55050 sc-eQTL 8.15e-02 -0.0854 0.0488 0.509 Other_T L1
ENSG00000162517 PEF1 -942172 sc-eQTL 1.16e-01 -0.103 0.0653 0.509 Other_T L1
ENSG00000186056 MATN1-AS1 -15780 sc-eQTL 2.27e-01 -0.0973 0.0802 0.509 Other_T L1
ENSG00000287510 AL137857.1 -28969 sc-eQTL 1.36e-01 0.125 0.0834 0.509 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -594064 sc-eQTL 2.00e-01 -0.125 0.0969 0.49 B_Activated L2
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 2.14e-01 -0.122 0.0977 0.49 B_Activated L2
ENSG00000134644 PUM1 -363267 sc-eQTL 9.79e-01 0.00242 0.0912 0.49 B_Activated L2
ENSG00000162510 MATN1 -20861 sc-eQTL 1.13e-01 0.126 0.0792 0.49 B_Activated L2
ENSG00000162511 LAPTM5 -55050 sc-eQTL 9.70e-01 0.00207 0.0556 0.49 B_Activated L2
ENSG00000162517 PEF1 -942172 sc-eQTL 1.29e-01 -0.143 0.094 0.49 B_Activated L2
ENSG00000186056 MATN1-AS1 -15780 sc-eQTL 5.93e-01 -0.0481 0.0897 0.49 B_Activated L2
ENSG00000287510 AL137857.1 -28969 sc-eQTL 3.07e-02 0.171 0.0784 0.49 B_Activated L2
ENSG00000060688 SNRNP40 -594064 sc-eQTL 9.52e-01 -0.00555 0.0931 0.509 B_Intermediate L2
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 8.54e-01 0.0143 0.0775 0.509 B_Intermediate L2
ENSG00000134644 PUM1 -363267 sc-eQTL 5.11e-01 -0.0482 0.0731 0.509 B_Intermediate L2
ENSG00000162510 MATN1 -20861 sc-eQTL 1.31e-01 -0.115 0.0757 0.509 B_Intermediate L2
ENSG00000162511 LAPTM5 -55050 sc-eQTL 4.60e-01 -0.0345 0.0467 0.509 B_Intermediate L2
ENSG00000162517 PEF1 -942172 sc-eQTL 5.46e-01 0.0524 0.0867 0.509 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -15780 sc-eQTL 3.37e-01 -0.063 0.0654 0.509 B_Intermediate L2
ENSG00000287510 AL137857.1 -28969 sc-eQTL 9.02e-01 -0.00907 0.0734 0.509 B_Intermediate L2
ENSG00000060688 SNRNP40 -594064 sc-eQTL 5.13e-01 -0.06 0.0915 0.506 B_Memory L2
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 5.43e-01 -0.0514 0.0843 0.506 B_Memory L2
ENSG00000134644 PUM1 -363267 sc-eQTL 3.12e-01 -0.0743 0.0733 0.506 B_Memory L2
ENSG00000162510 MATN1 -20861 sc-eQTL 8.86e-01 0.0101 0.0703 0.506 B_Memory L2
ENSG00000162511 LAPTM5 -55050 sc-eQTL 3.59e-01 -0.0571 0.0622 0.506 B_Memory L2
ENSG00000162517 PEF1 -942172 sc-eQTL 7.97e-01 -0.0214 0.0832 0.506 B_Memory L2
ENSG00000186056 MATN1-AS1 -15780 sc-eQTL 6.48e-01 -0.0326 0.0713 0.506 B_Memory L2
ENSG00000287510 AL137857.1 -28969 sc-eQTL 6.78e-01 -0.0347 0.0835 0.506 B_Memory L2
ENSG00000060688 SNRNP40 -594064 sc-eQTL 8.49e-01 0.0156 0.0821 0.509 B_Naive1 L2
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 4.13e-01 -0.0581 0.0708 0.509 B_Naive1 L2
ENSG00000134644 PUM1 -363267 sc-eQTL 6.71e-01 0.0266 0.0625 0.509 B_Naive1 L2
ENSG00000162510 MATN1 -20861 sc-eQTL 1.08e-03 0.205 0.0619 0.509 B_Naive1 L2
ENSG00000162511 LAPTM5 -55050 sc-eQTL 4.07e-01 -0.0351 0.0423 0.509 B_Naive1 L2
ENSG00000162517 PEF1 -942172 sc-eQTL 6.93e-01 -0.0295 0.0747 0.509 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -15780 sc-eQTL 5.81e-01 0.0308 0.0556 0.509 B_Naive1 L2
ENSG00000287510 AL137857.1 -28969 sc-eQTL 6.57e-02 -0.126 0.0682 0.509 B_Naive1 L2
ENSG00000060688 SNRNP40 -594064 sc-eQTL 1.81e-01 0.118 0.0878 0.509 B_Naive2 L2
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 1.01e-06 0.346 0.0687 0.509 B_Naive2 L2
ENSG00000134644 PUM1 -363267 sc-eQTL 2.12e-01 0.0889 0.071 0.509 B_Naive2 L2
ENSG00000162510 MATN1 -20861 sc-eQTL 1.85e-01 0.0906 0.0681 0.509 B_Naive2 L2
ENSG00000162511 LAPTM5 -55050 sc-eQTL 4.87e-01 -0.0323 0.0464 0.509 B_Naive2 L2
ENSG00000162517 PEF1 -942172 sc-eQTL 9.94e-01 -0.000629 0.0845 0.509 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -15780 sc-eQTL 7.30e-01 -0.0233 0.0676 0.509 B_Naive2 L2
ENSG00000287510 AL137857.1 -28969 sc-eQTL 1.48e-01 0.105 0.0727 0.509 B_Naive2 L2
ENSG00000060688 SNRNP40 -594064 sc-eQTL 9.15e-01 0.0092 0.0863 0.507 CD4_CTL L2
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 9.93e-01 -0.000785 0.0849 0.507 CD4_CTL L2
ENSG00000134644 PUM1 -363267 sc-eQTL 2.16e-01 -0.103 0.0829 0.507 CD4_CTL L2
ENSG00000162511 LAPTM5 -55050 sc-eQTL 8.07e-01 0.0181 0.0742 0.507 CD4_CTL L2
ENSG00000162517 PEF1 -942172 sc-eQTL 8.95e-01 0.0101 0.0761 0.507 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -15780 sc-eQTL 1.92e-01 -0.106 0.0808 0.507 CD4_CTL L2
ENSG00000287510 AL137857.1 -28969 sc-eQTL 8.04e-01 0.0178 0.0716 0.507 CD4_CTL L2
ENSG00000060688 SNRNP40 -594064 sc-eQTL 6.84e-01 0.0277 0.0678 0.509 CD4_Naive L2
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 5.08e-01 0.0399 0.0601 0.509 CD4_Naive L2
ENSG00000134644 PUM1 -363267 sc-eQTL 4.28e-01 0.0381 0.048 0.509 CD4_Naive L2
ENSG00000162511 LAPTM5 -55050 sc-eQTL 7.28e-01 -0.0179 0.0515 0.509 CD4_Naive L2
ENSG00000162517 PEF1 -942172 sc-eQTL 7.54e-01 0.0177 0.0564 0.509 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -15780 sc-eQTL 6.00e-01 0.0274 0.0522 0.509 CD4_Naive L2
ENSG00000287510 AL137857.1 -28969 sc-eQTL 4.43e-01 -0.0461 0.0599 0.509 CD4_Naive L2
ENSG00000060688 SNRNP40 -594064 sc-eQTL 1.41e-01 -0.125 0.0846 0.509 CD4_TCM L2
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 9.98e-01 -0.000141 0.0686 0.509 CD4_TCM L2
ENSG00000134644 PUM1 -363267 sc-eQTL 8.00e-01 0.0154 0.0607 0.509 CD4_TCM L2
ENSG00000162511 LAPTM5 -55050 sc-eQTL 3.49e-01 -0.0471 0.0502 0.509 CD4_TCM L2
ENSG00000162517 PEF1 -942172 sc-eQTL 7.76e-01 -0.0192 0.0675 0.509 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -15780 sc-eQTL 1.64e-01 -0.0888 0.0636 0.509 CD4_TCM L2
ENSG00000287510 AL137857.1 -28969 sc-eQTL 4.57e-02 0.142 0.0705 0.509 CD4_TCM L2
ENSG00000060688 SNRNP40 -594064 sc-eQTL 4.86e-01 -0.0588 0.0843 0.509 CD4_TEM L2
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 3.23e-01 -0.0796 0.0803 0.509 CD4_TEM L2
ENSG00000134644 PUM1 -363267 sc-eQTL 9.42e-01 0.0049 0.067 0.509 CD4_TEM L2
ENSG00000162511 LAPTM5 -55050 sc-eQTL 6.97e-01 -0.0264 0.0678 0.509 CD4_TEM L2
ENSG00000162517 PEF1 -942172 sc-eQTL 6.26e-01 0.0371 0.0759 0.509 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -15780 sc-eQTL 7.00e-01 -0.0306 0.0793 0.509 CD4_TEM L2
ENSG00000287510 AL137857.1 -28969 sc-eQTL 7.00e-01 -0.0302 0.0781 0.509 CD4_TEM L2
ENSG00000060688 SNRNP40 -594064 sc-eQTL 7.07e-01 0.0353 0.0936 0.509 CD8_CTL L2
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 2.66e-02 0.158 0.071 0.509 CD8_CTL L2
ENSG00000134644 PUM1 -363267 sc-eQTL 3.27e-01 -0.0683 0.0696 0.509 CD8_CTL L2
ENSG00000162511 LAPTM5 -55050 sc-eQTL 6.67e-01 0.0332 0.0772 0.509 CD8_CTL L2
ENSG00000162517 PEF1 -942172 sc-eQTL 8.66e-01 0.0113 0.0672 0.509 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -15780 sc-eQTL 7.89e-01 0.0218 0.0811 0.509 CD8_CTL L2
ENSG00000287510 AL137857.1 -28969 sc-eQTL 3.68e-01 0.0687 0.0762 0.509 CD8_CTL L2
ENSG00000060688 SNRNP40 -594064 sc-eQTL 1.32e-01 -0.128 0.0846 0.509 CD8_Naive L2
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 7.50e-01 -0.0234 0.0734 0.509 CD8_Naive L2
ENSG00000134644 PUM1 -363267 sc-eQTL 7.91e-02 0.103 0.0586 0.509 CD8_Naive L2
ENSG00000162511 LAPTM5 -55050 sc-eQTL 2.58e-01 -0.0639 0.0564 0.509 CD8_Naive L2
ENSG00000162517 PEF1 -942172 sc-eQTL 9.99e-01 8.87e-05 0.0787 0.509 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -15780 sc-eQTL 2.47e-01 -0.0818 0.0704 0.509 CD8_Naive L2
ENSG00000287510 AL137857.1 -28969 sc-eQTL 1.09e-01 -0.123 0.0764 0.509 CD8_Naive L2
ENSG00000060688 SNRNP40 -594064 sc-eQTL 7.13e-01 -0.0356 0.0964 0.514 CD8_TCM L2
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 3.78e-01 -0.0779 0.0882 0.514 CD8_TCM L2
ENSG00000134644 PUM1 -363267 sc-eQTL 2.65e-01 0.0927 0.0828 0.514 CD8_TCM L2
ENSG00000162511 LAPTM5 -55050 sc-eQTL 6.24e-01 0.0427 0.0869 0.514 CD8_TCM L2
ENSG00000162517 PEF1 -942172 sc-eQTL 2.39e-01 0.105 0.0886 0.514 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -15780 sc-eQTL 7.99e-01 -0.0205 0.0805 0.514 CD8_TCM L2
ENSG00000287510 AL137857.1 -28969 sc-eQTL 3.34e-01 -0.0787 0.0812 0.514 CD8_TCM L2
ENSG00000060688 SNRNP40 -594064 sc-eQTL 8.70e-01 -0.0147 0.0897 0.511 CD8_TEM L2
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 3.64e-01 -0.0781 0.0858 0.511 CD8_TEM L2
ENSG00000134644 PUM1 -363267 sc-eQTL 5.11e-01 0.0578 0.0878 0.511 CD8_TEM L2
ENSG00000162511 LAPTM5 -55050 sc-eQTL 7.23e-01 0.0293 0.0826 0.511 CD8_TEM L2
ENSG00000162517 PEF1 -942172 sc-eQTL 3.64e-01 0.0706 0.0776 0.511 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -15780 sc-eQTL 1.00e-01 0.141 0.0852 0.511 CD8_TEM L2
ENSG00000287510 AL137857.1 -28969 sc-eQTL 9.97e-02 0.128 0.0771 0.511 CD8_TEM L2
ENSG00000060688 SNRNP40 -594064 sc-eQTL 4.49e-01 -0.0683 0.09 0.511 MAIT L2
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 1.92e-01 -0.104 0.0796 0.511 MAIT L2
ENSG00000134644 PUM1 -363267 sc-eQTL 3.19e-01 0.0764 0.0764 0.511 MAIT L2
ENSG00000162511 LAPTM5 -55050 sc-eQTL 3.75e-01 -0.0641 0.0721 0.511 MAIT L2
ENSG00000162517 PEF1 -942172 sc-eQTL 4.98e-01 -0.0538 0.0793 0.511 MAIT L2
ENSG00000186056 MATN1-AS1 -15780 sc-eQTL 4.51e-01 -0.0607 0.0803 0.511 MAIT L2
ENSG00000287510 AL137857.1 -28969 sc-eQTL 3.70e-02 0.172 0.0821 0.511 MAIT L2
ENSG00000060688 SNRNP40 -594064 sc-eQTL 1.67e-01 -0.128 0.0924 0.504 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 7.24e-02 0.14 0.0778 0.504 NK_CD56bright L2
ENSG00000134644 PUM1 -363267 sc-eQTL 3.84e-01 -0.0717 0.0822 0.504 NK_CD56bright L2
ENSG00000162511 LAPTM5 -55050 sc-eQTL 1.92e-01 -0.106 0.0809 0.504 NK_CD56bright L2
ENSG00000162517 PEF1 -942172 sc-eQTL 8.05e-01 0.0195 0.0789 0.504 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -15780 sc-eQTL 4.42e-01 0.0628 0.0815 0.504 NK_CD56bright L2
ENSG00000287510 AL137857.1 -28969 sc-eQTL 7.17e-01 -0.0292 0.0804 0.504 NK_CD56bright L2
ENSG00000060688 SNRNP40 -594064 sc-eQTL 6.15e-01 -0.0447 0.0887 0.506 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 4.20e-02 0.133 0.065 0.506 NK_CD56dim L2
ENSG00000134644 PUM1 -363267 sc-eQTL 9.76e-01 0.00207 0.0673 0.506 NK_CD56dim L2
ENSG00000162511 LAPTM5 -55050 sc-eQTL 2.92e-01 0.0756 0.0716 0.506 NK_CD56dim L2
ENSG00000162517 PEF1 -942172 sc-eQTL 3.98e-01 0.054 0.0638 0.506 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -15780 sc-eQTL 2.36e-01 -0.106 0.0896 0.506 NK_CD56dim L2
ENSG00000287510 AL137857.1 -28969 sc-eQTL 5.78e-01 -0.0413 0.0742 0.506 NK_CD56dim L2
ENSG00000060688 SNRNP40 -594064 sc-eQTL 7.93e-01 -0.0247 0.0941 0.5 NK_HLA L2
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 1.77e-02 -0.198 0.0828 0.5 NK_HLA L2
ENSG00000134644 PUM1 -363267 sc-eQTL 3.44e-01 -0.0774 0.0817 0.5 NK_HLA L2
ENSG00000162511 LAPTM5 -55050 sc-eQTL 3.36e-01 -0.0752 0.078 0.5 NK_HLA L2
ENSG00000162517 PEF1 -942172 sc-eQTL 7.25e-01 0.031 0.088 0.5 NK_HLA L2
ENSG00000186056 MATN1-AS1 -15780 sc-eQTL 7.28e-01 -0.029 0.0831 0.5 NK_HLA L2
ENSG00000287510 AL137857.1 -28969 sc-eQTL 4.20e-01 0.0648 0.0802 0.5 NK_HLA L2
ENSG00000060688 SNRNP40 -594064 sc-eQTL 9.51e-01 -0.00531 0.0862 0.506 NK_cytokine L2
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 7.32e-01 0.0231 0.0672 0.506 NK_cytokine L2
ENSG00000134644 PUM1 -363267 sc-eQTL 2.36e-01 -0.0862 0.0725 0.506 NK_cytokine L2
ENSG00000162511 LAPTM5 -55050 sc-eQTL 8.99e-01 0.0102 0.0801 0.506 NK_cytokine L2
ENSG00000162517 PEF1 -942172 sc-eQTL 9.24e-01 -0.00651 0.0682 0.506 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -15780 sc-eQTL 4.41e-01 -0.0654 0.0847 0.506 NK_cytokine L2
ENSG00000287510 AL137857.1 -28969 sc-eQTL 8.90e-01 0.011 0.0789 0.506 NK_cytokine L2
ENSG00000060688 SNRNP40 -594064 sc-eQTL 4.56e-01 -0.076 0.102 0.522 PB L2
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 6.91e-01 0.0471 0.118 0.522 PB L2
ENSG00000134644 PUM1 -363267 sc-eQTL 3.92e-01 0.0878 0.102 0.522 PB L2
ENSG00000162510 MATN1 -20861 sc-eQTL 5.50e-01 -0.0573 0.0955 0.522 PB L2
ENSG00000162511 LAPTM5 -55050 sc-eQTL 9.01e-01 -0.00851 0.0683 0.522 PB L2
ENSG00000162517 PEF1 -942172 sc-eQTL 4.13e-01 0.0861 0.105 0.522 PB L2
ENSG00000186056 MATN1-AS1 -15780 sc-eQTL 1.72e-01 -0.127 0.0927 0.522 PB L2
ENSG00000287510 AL137857.1 -28969 sc-eQTL 5.37e-01 0.0615 0.0993 0.522 PB L2
ENSG00000060688 SNRNP40 -594064 sc-eQTL 8.83e-02 0.113 0.0662 0.513 Pro_T L2
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 3.48e-01 0.0793 0.0844 0.513 Pro_T L2
ENSG00000134644 PUM1 -363267 sc-eQTL 9.65e-02 0.131 0.0784 0.513 Pro_T L2
ENSG00000162511 LAPTM5 -55050 sc-eQTL 5.32e-01 -0.0354 0.0565 0.513 Pro_T L2
ENSG00000162517 PEF1 -942172 sc-eQTL 5.24e-01 -0.0529 0.083 0.513 Pro_T L2
ENSG00000186056 MATN1-AS1 -15780 sc-eQTL 7.12e-01 0.0292 0.0791 0.513 Pro_T L2
ENSG00000287510 AL137857.1 -28969 sc-eQTL 1.71e-01 0.0995 0.0724 0.513 Pro_T L2
ENSG00000060688 SNRNP40 -594064 sc-eQTL 9.98e-01 0.000176 0.0879 0.509 Treg L2
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 5.63e-01 -0.0492 0.085 0.509 Treg L2
ENSG00000134644 PUM1 -363267 sc-eQTL 9.38e-01 -0.00533 0.0681 0.509 Treg L2
ENSG00000162511 LAPTM5 -55050 sc-eQTL 9.97e-01 0.000262 0.0779 0.509 Treg L2
ENSG00000162517 PEF1 -942172 sc-eQTL 9.46e-01 -0.00568 0.0842 0.509 Treg L2
ENSG00000186056 MATN1-AS1 -15780 sc-eQTL 3.93e-02 -0.163 0.0786 0.509 Treg L2
ENSG00000287510 AL137857.1 -28969 sc-eQTL 7.96e-01 0.0205 0.0793 0.509 Treg L2
ENSG00000060688 SNRNP40 -594064 sc-eQTL 4.33e-01 0.071 0.0903 0.495 cDC L2
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 9.65e-01 0.00426 0.098 0.495 cDC L2
ENSG00000134644 PUM1 -363267 sc-eQTL 4.83e-01 -0.0591 0.084 0.495 cDC L2
ENSG00000162511 LAPTM5 -55050 sc-eQTL 4.23e-01 -0.0473 0.0589 0.495 cDC L2
ENSG00000162517 PEF1 -942172 sc-eQTL 8.41e-01 -0.0172 0.0854 0.495 cDC L2
ENSG00000168528 SERINC2 -706841 sc-eQTL 4.76e-01 0.054 0.0756 0.495 cDC L2
ENSG00000284543 LINC01226 -803502 sc-eQTL 7.86e-03 -0.196 0.073 0.495 cDC L2
ENSG00000287510 AL137857.1 -28969 sc-eQTL 7.99e-02 0.14 0.0794 0.495 cDC L2
ENSG00000060688 SNRNP40 -594064 sc-eQTL 5.34e-01 -0.0448 0.0719 0.509 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 3.76e-01 0.071 0.0801 0.509 cMono_IL1B L2
ENSG00000134644 PUM1 -363267 sc-eQTL 3.96e-01 -0.0461 0.0542 0.509 cMono_IL1B L2
ENSG00000162511 LAPTM5 -55050 sc-eQTL 8.57e-01 0.0086 0.0476 0.509 cMono_IL1B L2
ENSG00000162512 SDC3 -206034 sc-eQTL 2.72e-01 0.0986 0.0895 0.509 cMono_IL1B L2
ENSG00000162517 PEF1 -942172 sc-eQTL 8.52e-01 -0.0137 0.0733 0.509 cMono_IL1B L2
ENSG00000168528 SERINC2 -706841 sc-eQTL 5.75e-01 0.051 0.0908 0.509 cMono_IL1B L2
ENSG00000284543 LINC01226 -803502 sc-eQTL 8.50e-02 -0.138 0.0798 0.509 cMono_IL1B L2
ENSG00000287510 AL137857.1 -28969 sc-eQTL 9.61e-01 0.00365 0.0749 0.509 cMono_IL1B L2
ENSG00000060688 SNRNP40 -594064 sc-eQTL 7.51e-01 -0.0243 0.0763 0.509 cMono_S100A L2
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 6.29e-01 -0.0436 0.0901 0.509 cMono_S100A L2
ENSG00000134644 PUM1 -363267 sc-eQTL 8.80e-01 0.00984 0.0651 0.509 cMono_S100A L2
ENSG00000162511 LAPTM5 -55050 sc-eQTL 9.68e-01 -0.00199 0.0501 0.509 cMono_S100A L2
ENSG00000162512 SDC3 -206034 sc-eQTL 6.47e-01 -0.0396 0.0864 0.509 cMono_S100A L2
ENSG00000162517 PEF1 -942172 sc-eQTL 1.33e-01 0.117 0.0777 0.509 cMono_S100A L2
ENSG00000168528 SERINC2 -706841 sc-eQTL 4.82e-01 0.0644 0.0915 0.509 cMono_S100A L2
ENSG00000284543 LINC01226 -803502 sc-eQTL 5.39e-01 -0.0458 0.0743 0.509 cMono_S100A L2
ENSG00000287510 AL137857.1 -28969 sc-eQTL 9.97e-01 -0.000245 0.0747 0.509 cMono_S100A L2
ENSG00000060688 SNRNP40 -594064 sc-eQTL 5.69e-01 -0.0651 0.114 0.515 gdT L2
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 6.12e-01 -0.0498 0.098 0.515 gdT L2
ENSG00000134644 PUM1 -363267 sc-eQTL 5.58e-01 -0.0593 0.101 0.515 gdT L2
ENSG00000162511 LAPTM5 -55050 sc-eQTL 6.30e-01 0.053 0.11 0.515 gdT L2
ENSG00000162517 PEF1 -942172 sc-eQTL 9.07e-01 0.0118 0.101 0.515 gdT L2
ENSG00000186056 MATN1-AS1 -15780 sc-eQTL 8.19e-01 -0.0232 0.101 0.515 gdT L2
ENSG00000287510 AL137857.1 -28969 sc-eQTL 5.21e-01 0.0631 0.0981 0.515 gdT L2
ENSG00000060688 SNRNP40 -594064 sc-eQTL 3.08e-01 -0.0858 0.0839 0.502 intMono L2
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 1.31e-01 0.136 0.09 0.502 intMono L2
ENSG00000134644 PUM1 -363267 sc-eQTL 9.92e-01 0.000727 0.0768 0.502 intMono L2
ENSG00000162511 LAPTM5 -55050 sc-eQTL 1.40e-01 -0.0888 0.0599 0.502 intMono L2
ENSG00000162512 SDC3 -206034 sc-eQTL 5.25e-01 0.0525 0.0824 0.502 intMono L2
ENSG00000162517 PEF1 -942172 sc-eQTL 8.86e-01 0.0125 0.0866 0.502 intMono L2
ENSG00000168528 SERINC2 -706841 sc-eQTL 2.73e-02 0.19 0.0853 0.502 intMono L2
ENSG00000284543 LINC01226 -803502 sc-eQTL 9.23e-01 -0.00788 0.0818 0.502 intMono L2
ENSG00000287510 AL137857.1 -28969 sc-eQTL 5.10e-01 -0.0539 0.0817 0.502 intMono L2
ENSG00000060688 SNRNP40 -594064 sc-eQTL 5.48e-01 -0.0474 0.0788 0.505 ncMono L2
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 6.68e-01 0.036 0.084 0.505 ncMono L2
ENSG00000134644 PUM1 -363267 sc-eQTL 7.15e-01 -0.0251 0.0687 0.505 ncMono L2
ENSG00000162511 LAPTM5 -55050 sc-eQTL 7.11e-01 -0.0231 0.0624 0.505 ncMono L2
ENSG00000162512 SDC3 -206034 sc-eQTL 9.60e-02 0.116 0.0695 0.505 ncMono L2
ENSG00000162517 PEF1 -942172 sc-eQTL 6.84e-01 -0.0327 0.0802 0.505 ncMono L2
ENSG00000168528 SERINC2 -706841 sc-eQTL 7.15e-01 0.0279 0.0763 0.505 ncMono L2
ENSG00000284543 LINC01226 -803502 sc-eQTL 7.17e-01 0.0277 0.0762 0.505 ncMono L2
ENSG00000287510 AL137857.1 -28969 sc-eQTL 2.10e-01 0.0991 0.0788 0.505 ncMono L2
ENSG00000060688 SNRNP40 -594064 sc-eQTL 4.26e-01 0.0693 0.0869 0.503 pDC L2
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 8.50e-01 -0.0181 0.0956 0.503 pDC L2
ENSG00000134644 PUM1 -363267 sc-eQTL 4.43e-01 -0.0609 0.0791 0.503 pDC L2
ENSG00000162511 LAPTM5 -55050 sc-eQTL 2.42e-01 -0.0862 0.0734 0.503 pDC L2
ENSG00000162517 PEF1 -942172 sc-eQTL 5.64e-01 0.0553 0.0955 0.503 pDC L2
ENSG00000168528 SERINC2 -706841 sc-eQTL 8.41e-01 -0.018 0.0894 0.503 pDC L2
ENSG00000284543 LINC01226 -803502 sc-eQTL 6.12e-01 0.0352 0.0693 0.503 pDC L2
ENSG00000287510 AL137857.1 -28969 sc-eQTL 8.12e-01 0.0194 0.0816 0.503 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -594064 sc-eQTL 3.01e-01 -0.0911 0.0879 0.509 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 7.68e-01 -0.0216 0.0733 0.509 B_Memory LOneK1K
ENSG00000134644 PUM1 -363267 sc-eQTL 2.55e-01 -0.0739 0.0648 0.509 B_Memory LOneK1K
ENSG00000162510 MATN1 -20861 sc-eQTL 5.13e-01 -0.0485 0.074 0.509 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -55050 sc-eQTL 8.32e-02 -0.0805 0.0462 0.509 B_Memory LOneK1K
ENSG00000162517 PEF1 -942172 sc-eQTL 7.48e-01 0.0248 0.0771 0.509 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -15780 sc-eQTL 2.17e-01 -0.076 0.0614 0.509 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -28969 sc-eQTL 4.09e-01 0.0554 0.067 0.509 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -594064 sc-eQTL 2.29e-01 0.0964 0.0798 0.509 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 8.34e-02 0.109 0.0629 0.509 B_Naive LOneK1K
ENSG00000134644 PUM1 -363267 sc-eQTL 4.13e-01 0.0491 0.0598 0.509 B_Naive LOneK1K
ENSG00000162510 MATN1 -20861 sc-eQTL 6.05e-04 0.195 0.0561 0.509 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -55050 sc-eQTL 4.53e-01 -0.0305 0.0406 0.509 B_Naive LOneK1K
ENSG00000162517 PEF1 -942172 sc-eQTL 9.73e-01 -0.00255 0.0742 0.509 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -15780 sc-eQTL 5.13e-01 0.0343 0.0524 0.509 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -28969 sc-eQTL 3.47e-01 -0.0586 0.0622 0.509 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -594064 sc-eQTL 8.06e-01 -0.0169 0.0685 0.509 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 5.87e-01 0.0422 0.0775 0.509 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -363267 sc-eQTL 5.33e-01 -0.0309 0.0494 0.509 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -55050 sc-eQTL 8.60e-01 0.00769 0.0435 0.509 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -206034 sc-eQTL 5.37e-01 0.0548 0.0887 0.509 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -942172 sc-eQTL 4.24e-01 0.0499 0.0623 0.509 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -706841 sc-eQTL 4.42e-01 0.0703 0.0912 0.509 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -803502 sc-eQTL 8.56e-02 -0.128 0.0743 0.509 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -28969 sc-eQTL 7.96e-01 -0.0181 0.0701 0.509 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -594064 sc-eQTL 1.69e-01 -0.103 0.0746 0.506 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 1.04e-01 0.133 0.0815 0.506 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -363267 sc-eQTL 9.94e-01 -0.000524 0.0672 0.506 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -55050 sc-eQTL 3.53e-01 -0.0499 0.0536 0.506 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -206034 sc-eQTL 3.48e-01 0.0737 0.0784 0.506 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -942172 sc-eQTL 4.51e-01 0.0539 0.0712 0.506 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -706841 sc-eQTL 8.29e-02 0.141 0.0808 0.506 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -803502 sc-eQTL 9.29e-01 0.00687 0.0773 0.506 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -28969 sc-eQTL 8.69e-01 0.0127 0.0774 0.506 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -594064 sc-eQTL 2.46e-01 -0.0967 0.0832 0.506 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -594258 sc-eQTL 3.10e-01 0.0579 0.0569 0.506 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -363267 sc-eQTL 5.72e-01 -0.0354 0.0624 0.506 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -55050 sc-eQTL 6.97e-01 0.0273 0.0698 0.506 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -942172 sc-eQTL 9.70e-01 0.00203 0.0531 0.506 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -15780 sc-eQTL 2.04e-01 -0.102 0.0802 0.506 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -28969 sc-eQTL 6.47e-01 0.0319 0.0695 0.506 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000121766 ZCCHC17 -594258 eQTL 3.73e-02 -0.0364 0.0174 0.0 0.0 0.462
ENSG00000162510 MATN1 -20861 eQTL 0.00175 -0.0604 0.0193 0.00256 0.0022 0.462
ENSG00000162511 LAPTM5 -55050 eQTL 2.23e-07 0.0506 0.00971 0.0 0.0 0.462
ENSG00000168528 SERINC2 -706841 eQTL 0.00669 -0.103 0.0379 0.0 0.0 0.462

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162510 MATN1 -20861 1.6e-05 1.51e-05 2.94e-06 8.45e-06 2.48e-06 7.4e-06 2.07e-05 2.13e-06 1.48e-05 7.3e-06 1.86e-05 6.86e-06 2.66e-05 5.14e-06 4.71e-06 9.17e-06 7.67e-06 1.22e-05 4.22e-06 3.39e-06 7.4e-06 1.5e-05 1.47e-05 4.81e-06 2.42e-05 5.11e-06 7.67e-06 6.17e-06 1.67e-05 1.52e-05 1.04e-05 9.55e-07 1.4e-06 4.03e-06 5.89e-06 3.3e-06 1.7e-06 2.4e-06 2.68e-06 2e-06 1.12e-06 1.86e-05 2.36e-06 2.03e-07 1.33e-06 2.35e-06 2.15e-06 8.5e-07 5.93e-07