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Genes within 1Mb (chr1:30701893:C:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -594895 sc-eQTL 1.89e-01 -0.113 0.0857 0.301 B L1
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 2.48e-01 -0.0795 0.0687 0.301 B L1
ENSG00000134644 PUM1 -364098 sc-eQTL 8.03e-01 -0.0144 0.0578 0.301 B L1
ENSG00000162510 MATN1 -21692 sc-eQTL 8.95e-01 -0.008 0.0608 0.301 B L1
ENSG00000162511 LAPTM5 -55881 sc-eQTL 3.68e-01 0.0428 0.0475 0.301 B L1
ENSG00000162517 PEF1 -943003 sc-eQTL 9.95e-01 0.000458 0.0718 0.301 B L1
ENSG00000186056 MATN1-AS1 -16611 sc-eQTL 1.04e-01 -0.0904 0.0554 0.301 B L1
ENSG00000287510 AL137857.1 -29800 sc-eQTL 9.76e-02 -0.109 0.0656 0.301 B L1
ENSG00000060688 SNRNP40 -594895 sc-eQTL 2.52e-01 0.0845 0.0736 0.301 CD4T L1
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 5.50e-01 -0.0345 0.0576 0.301 CD4T L1
ENSG00000134644 PUM1 -364098 sc-eQTL 7.14e-01 -0.0188 0.0513 0.301 CD4T L1
ENSG00000162511 LAPTM5 -55881 sc-eQTL 7.57e-01 0.0176 0.0569 0.301 CD4T L1
ENSG00000162517 PEF1 -943003 sc-eQTL 5.30e-01 -0.0374 0.0594 0.301 CD4T L1
ENSG00000186056 MATN1-AS1 -16611 sc-eQTL 5.01e-01 -0.0342 0.0508 0.301 CD4T L1
ENSG00000287510 AL137857.1 -29800 sc-eQTL 4.87e-01 -0.0424 0.0609 0.301 CD4T L1
ENSG00000060688 SNRNP40 -594895 sc-eQTL 9.64e-01 0.00449 0.0988 0.301 CD8T L1
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 5.22e-01 0.0421 0.0657 0.301 CD8T L1
ENSG00000134644 PUM1 -364098 sc-eQTL 5.40e-01 -0.0355 0.0579 0.301 CD8T L1
ENSG00000162511 LAPTM5 -55881 sc-eQTL 1.88e-01 0.074 0.056 0.301 CD8T L1
ENSG00000162517 PEF1 -943003 sc-eQTL 2.71e-01 -0.0763 0.0691 0.301 CD8T L1
ENSG00000186056 MATN1-AS1 -16611 sc-eQTL 6.24e-01 -0.0323 0.0659 0.301 CD8T L1
ENSG00000287510 AL137857.1 -29800 sc-eQTL 8.82e-01 -0.0123 0.0828 0.301 CD8T L1
ENSG00000060688 SNRNP40 -594895 sc-eQTL 1.19e-01 -0.136 0.0869 0.306 DC L1
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 8.96e-01 -0.0136 0.104 0.306 DC L1
ENSG00000134644 PUM1 -364098 sc-eQTL 1.05e-01 0.131 0.0806 0.306 DC L1
ENSG00000162511 LAPTM5 -55881 sc-eQTL 6.54e-01 0.026 0.0579 0.306 DC L1
ENSG00000162517 PEF1 -943003 sc-eQTL 8.04e-01 -0.0233 0.0939 0.306 DC L1
ENSG00000168528 SERINC2 -707672 sc-eQTL 6.41e-01 -0.0446 0.0955 0.306 DC L1
ENSG00000284543 LINC01226 -804333 sc-eQTL 2.17e-01 0.0781 0.063 0.306 DC L1
ENSG00000287510 AL137857.1 -29800 sc-eQTL 1.01e-01 -0.15 0.091 0.306 DC L1
ENSG00000060688 SNRNP40 -594895 sc-eQTL 7.78e-01 -0.0192 0.0678 0.301 Mono L1
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 5.09e-01 -0.0556 0.084 0.301 Mono L1
ENSG00000134644 PUM1 -364098 sc-eQTL 5.59e-01 -0.0315 0.0539 0.301 Mono L1
ENSG00000162511 LAPTM5 -55881 sc-eQTL 9.50e-01 0.00309 0.0496 0.301 Mono L1
ENSG00000162512 SDC3 -206865 sc-eQTL 4.23e-01 -0.0764 0.0952 0.301 Mono L1
ENSG00000162517 PEF1 -943003 sc-eQTL 3.41e-01 -0.0636 0.0667 0.301 Mono L1
ENSG00000168528 SERINC2 -707672 sc-eQTL 1.95e-01 -0.133 0.102 0.301 Mono L1
ENSG00000284543 LINC01226 -804333 sc-eQTL 1.50e-02 0.218 0.0888 0.301 Mono L1
ENSG00000287510 AL137857.1 -29800 sc-eQTL 4.64e-01 0.0576 0.0786 0.301 Mono L1
ENSG00000060688 SNRNP40 -594895 sc-eQTL 7.56e-01 -0.0292 0.0935 0.303 NK L1
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 2.83e-01 -0.0688 0.0639 0.303 NK L1
ENSG00000134644 PUM1 -364098 sc-eQTL 8.12e-01 0.016 0.0672 0.303 NK L1
ENSG00000162511 LAPTM5 -55881 sc-eQTL 2.80e-01 -0.0835 0.0771 0.303 NK L1
ENSG00000162517 PEF1 -943003 sc-eQTL 4.36e-01 -0.044 0.0564 0.303 NK L1
ENSG00000186056 MATN1-AS1 -16611 sc-eQTL 3.92e-01 0.0743 0.0867 0.303 NK L1
ENSG00000287510 AL137857.1 -29800 sc-eQTL 7.07e-01 -0.0302 0.0802 0.303 NK L1
ENSG00000060688 SNRNP40 -594895 sc-eQTL 6.75e-01 -0.0298 0.0711 0.301 Other_T L1
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 7.30e-01 0.0262 0.076 0.301 Other_T L1
ENSG00000134644 PUM1 -364098 sc-eQTL 3.67e-01 -0.0617 0.0682 0.301 Other_T L1
ENSG00000162511 LAPTM5 -55881 sc-eQTL 1.06e-01 0.0903 0.0557 0.301 Other_T L1
ENSG00000162517 PEF1 -943003 sc-eQTL 2.90e-02 0.163 0.074 0.301 Other_T L1
ENSG00000186056 MATN1-AS1 -16611 sc-eQTL 6.49e-01 0.0418 0.0917 0.301 Other_T L1
ENSG00000287510 AL137857.1 -29800 sc-eQTL 9.67e-02 -0.158 0.0949 0.301 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -594895 sc-eQTL 3.54e-01 0.103 0.111 0.314 B_Activated L2
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 4.21e-01 0.0902 0.112 0.314 B_Activated L2
ENSG00000134644 PUM1 -364098 sc-eQTL 8.79e-01 -0.0159 0.104 0.314 B_Activated L2
ENSG00000162510 MATN1 -21692 sc-eQTL 5.90e-02 -0.171 0.0901 0.314 B_Activated L2
ENSG00000162511 LAPTM5 -55881 sc-eQTL 5.67e-01 -0.0363 0.0634 0.314 B_Activated L2
ENSG00000162517 PEF1 -943003 sc-eQTL 8.12e-01 0.0257 0.108 0.314 B_Activated L2
ENSG00000186056 MATN1-AS1 -16611 sc-eQTL 9.31e-01 0.00892 0.102 0.314 B_Activated L2
ENSG00000287510 AL137857.1 -29800 sc-eQTL 9.52e-03 -0.233 0.0889 0.314 B_Activated L2
ENSG00000060688 SNRNP40 -594895 sc-eQTL 6.57e-01 0.0469 0.105 0.303 B_Intermediate L2
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 7.21e-01 -0.0315 0.0879 0.303 B_Intermediate L2
ENSG00000134644 PUM1 -364098 sc-eQTL 7.98e-01 -0.0213 0.0829 0.303 B_Intermediate L2
ENSG00000162510 MATN1 -21692 sc-eQTL 3.34e-02 0.183 0.0854 0.303 B_Intermediate L2
ENSG00000162511 LAPTM5 -55881 sc-eQTL 8.98e-01 0.00683 0.053 0.303 B_Intermediate L2
ENSG00000162517 PEF1 -943003 sc-eQTL 7.66e-01 -0.0294 0.0984 0.303 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -16611 sc-eQTL 8.58e-01 0.0133 0.0744 0.303 B_Intermediate L2
ENSG00000287510 AL137857.1 -29800 sc-eQTL 1.77e-01 -0.112 0.0829 0.303 B_Intermediate L2
ENSG00000060688 SNRNP40 -594895 sc-eQTL 8.22e-01 -0.0232 0.103 0.302 B_Memory L2
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 4.16e-01 0.0771 0.0946 0.302 B_Memory L2
ENSG00000134644 PUM1 -364098 sc-eQTL 2.07e-01 0.104 0.0822 0.302 B_Memory L2
ENSG00000162510 MATN1 -21692 sc-eQTL 9.74e-02 0.131 0.0784 0.302 B_Memory L2
ENSG00000162511 LAPTM5 -55881 sc-eQTL 4.78e-01 0.0496 0.0699 0.302 B_Memory L2
ENSG00000162517 PEF1 -943003 sc-eQTL 9.71e-01 -0.00338 0.0934 0.302 B_Memory L2
ENSG00000186056 MATN1-AS1 -16611 sc-eQTL 8.52e-01 -0.015 0.08 0.302 B_Memory L2
ENSG00000287510 AL137857.1 -29800 sc-eQTL 4.00e-01 0.0789 0.0936 0.302 B_Memory L2
ENSG00000060688 SNRNP40 -594895 sc-eQTL 3.17e-01 -0.0943 0.0939 0.301 B_Naive1 L2
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 9.76e-01 0.00247 0.0813 0.301 B_Naive1 L2
ENSG00000134644 PUM1 -364098 sc-eQTL 2.22e-01 -0.0876 0.0715 0.301 B_Naive1 L2
ENSG00000162510 MATN1 -21692 sc-eQTL 7.85e-01 -0.0199 0.0728 0.301 B_Naive1 L2
ENSG00000162511 LAPTM5 -55881 sc-eQTL 4.81e-01 0.0343 0.0486 0.301 B_Naive1 L2
ENSG00000162517 PEF1 -943003 sc-eQTL 8.38e-01 0.0175 0.0857 0.301 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -16611 sc-eQTL 2.28e-01 -0.0769 0.0636 0.301 B_Naive1 L2
ENSG00000287510 AL137857.1 -29800 sc-eQTL 7.16e-01 -0.0287 0.0788 0.301 B_Naive1 L2
ENSG00000060688 SNRNP40 -594895 sc-eQTL 7.21e-02 -0.18 0.0994 0.3 B_Naive2 L2
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 3.80e-04 -0.29 0.0802 0.3 B_Naive2 L2
ENSG00000134644 PUM1 -364098 sc-eQTL 6.67e-01 0.0349 0.0809 0.3 B_Naive2 L2
ENSG00000162510 MATN1 -21692 sc-eQTL 8.12e-01 -0.0185 0.0777 0.3 B_Naive2 L2
ENSG00000162511 LAPTM5 -55881 sc-eQTL 5.70e-01 0.03 0.0527 0.3 B_Naive2 L2
ENSG00000162517 PEF1 -943003 sc-eQTL 2.08e-01 -0.121 0.0956 0.3 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -16611 sc-eQTL 2.80e-01 -0.0829 0.0766 0.3 B_Naive2 L2
ENSG00000287510 AL137857.1 -29800 sc-eQTL 1.93e-01 -0.108 0.0826 0.3 B_Naive2 L2
ENSG00000060688 SNRNP40 -594895 sc-eQTL 7.40e-01 0.0336 0.101 0.3 CD4_CTL L2
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 4.39e-01 0.0772 0.0994 0.3 CD4_CTL L2
ENSG00000134644 PUM1 -364098 sc-eQTL 8.73e-01 0.0156 0.0977 0.3 CD4_CTL L2
ENSG00000162511 LAPTM5 -55881 sc-eQTL 6.70e-01 0.0372 0.087 0.3 CD4_CTL L2
ENSG00000162517 PEF1 -943003 sc-eQTL 7.75e-01 0.0256 0.0892 0.3 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -16611 sc-eQTL 4.18e-01 0.0771 0.0951 0.3 CD4_CTL L2
ENSG00000287510 AL137857.1 -29800 sc-eQTL 2.58e-01 0.095 0.0838 0.3 CD4_CTL L2
ENSG00000060688 SNRNP40 -594895 sc-eQTL 8.06e-01 -0.0191 0.0778 0.301 CD4_Naive L2
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 2.07e-01 -0.087 0.0688 0.301 CD4_Naive L2
ENSG00000134644 PUM1 -364098 sc-eQTL 7.78e-01 -0.0155 0.0551 0.301 CD4_Naive L2
ENSG00000162511 LAPTM5 -55881 sc-eQTL 8.53e-01 -0.0109 0.059 0.301 CD4_Naive L2
ENSG00000162517 PEF1 -943003 sc-eQTL 3.09e-01 -0.0659 0.0646 0.301 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -16611 sc-eQTL 7.05e-02 -0.108 0.0595 0.301 CD4_Naive L2
ENSG00000287510 AL137857.1 -29800 sc-eQTL 8.59e-01 0.0122 0.0688 0.301 CD4_Naive L2
ENSG00000060688 SNRNP40 -594895 sc-eQTL 1.08e-01 0.156 0.097 0.301 CD4_TCM L2
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 6.57e-01 0.035 0.0786 0.301 CD4_TCM L2
ENSG00000134644 PUM1 -364098 sc-eQTL 9.04e-01 -0.00838 0.0696 0.301 CD4_TCM L2
ENSG00000162511 LAPTM5 -55881 sc-eQTL 2.56e-01 0.0657 0.0576 0.301 CD4_TCM L2
ENSG00000162517 PEF1 -943003 sc-eQTL 7.01e-01 -0.0298 0.0774 0.301 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -16611 sc-eQTL 7.24e-01 0.0259 0.0733 0.301 CD4_TCM L2
ENSG00000287510 AL137857.1 -29800 sc-eQTL 2.07e-01 -0.103 0.0813 0.301 CD4_TCM L2
ENSG00000060688 SNRNP40 -594895 sc-eQTL 4.18e-01 0.0778 0.0959 0.301 CD4_TEM L2
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 2.39e-01 0.108 0.0913 0.301 CD4_TEM L2
ENSG00000134644 PUM1 -364098 sc-eQTL 5.24e-01 -0.0486 0.0762 0.301 CD4_TEM L2
ENSG00000162511 LAPTM5 -55881 sc-eQTL 5.26e-01 -0.0489 0.0771 0.301 CD4_TEM L2
ENSG00000162517 PEF1 -943003 sc-eQTL 9.60e-01 -0.00431 0.0864 0.301 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -16611 sc-eQTL 9.63e-01 0.0042 0.0902 0.301 CD4_TEM L2
ENSG00000287510 AL137857.1 -29800 sc-eQTL 1.53e-01 0.127 0.0885 0.301 CD4_TEM L2
ENSG00000060688 SNRNP40 -594895 sc-eQTL 9.60e-01 0.00542 0.108 0.301 CD8_CTL L2
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 2.38e-01 -0.0975 0.0824 0.301 CD8_CTL L2
ENSG00000134644 PUM1 -364098 sc-eQTL 2.04e-01 0.102 0.0799 0.301 CD8_CTL L2
ENSG00000162511 LAPTM5 -55881 sc-eQTL 9.36e-01 0.00719 0.0889 0.301 CD8_CTL L2
ENSG00000162517 PEF1 -943003 sc-eQTL 9.05e-01 -0.00928 0.0774 0.301 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -16611 sc-eQTL 2.36e-01 -0.111 0.0931 0.301 CD8_CTL L2
ENSG00000287510 AL137857.1 -29800 sc-eQTL 6.45e-01 -0.0405 0.0878 0.301 CD8_CTL L2
ENSG00000060688 SNRNP40 -594895 sc-eQTL 5.35e-01 0.0599 0.0964 0.301 CD8_Naive L2
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 1.25e-01 0.128 0.0828 0.301 CD8_Naive L2
ENSG00000134644 PUM1 -364098 sc-eQTL 2.22e-02 -0.152 0.0661 0.301 CD8_Naive L2
ENSG00000162511 LAPTM5 -55881 sc-eQTL 2.33e-01 0.0766 0.064 0.301 CD8_Naive L2
ENSG00000162517 PEF1 -943003 sc-eQTL 5.65e-01 -0.0514 0.0891 0.301 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -16611 sc-eQTL 8.17e-01 -0.0186 0.0801 0.301 CD8_Naive L2
ENSG00000287510 AL137857.1 -29800 sc-eQTL 1.57e-01 0.123 0.0868 0.301 CD8_Naive L2
ENSG00000060688 SNRNP40 -594895 sc-eQTL 2.70e-01 0.12 0.108 0.294 CD8_TCM L2
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 6.69e-01 0.0426 0.0994 0.294 CD8_TCM L2
ENSG00000134644 PUM1 -364098 sc-eQTL 5.82e-01 -0.0515 0.0934 0.294 CD8_TCM L2
ENSG00000162511 LAPTM5 -55881 sc-eQTL 7.26e-01 -0.0344 0.0979 0.294 CD8_TCM L2
ENSG00000162517 PEF1 -943003 sc-eQTL 1.55e-01 -0.142 0.0995 0.294 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -16611 sc-eQTL 4.48e-01 0.0687 0.0905 0.294 CD8_TCM L2
ENSG00000287510 AL137857.1 -29800 sc-eQTL 1.13e-01 0.145 0.091 0.294 CD8_TCM L2
ENSG00000060688 SNRNP40 -594895 sc-eQTL 3.46e-01 -0.0979 0.104 0.299 CD8_TEM L2
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 6.56e-01 0.0444 0.0995 0.299 CD8_TEM L2
ENSG00000134644 PUM1 -364098 sc-eQTL 8.99e-01 -0.013 0.102 0.299 CD8_TEM L2
ENSG00000162511 LAPTM5 -55881 sc-eQTL 7.12e-01 -0.0353 0.0957 0.299 CD8_TEM L2
ENSG00000162517 PEF1 -943003 sc-eQTL 2.83e-01 -0.0967 0.0898 0.299 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -16611 sc-eQTL 2.61e-02 -0.22 0.0981 0.299 CD8_TEM L2
ENSG00000287510 AL137857.1 -29800 sc-eQTL 1.13e-01 -0.142 0.0893 0.299 CD8_TEM L2
ENSG00000060688 SNRNP40 -594895 sc-eQTL 7.75e-01 -0.0298 0.104 0.299 MAIT L2
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 1.67e-01 0.127 0.0918 0.299 MAIT L2
ENSG00000134644 PUM1 -364098 sc-eQTL 4.95e-01 -0.0604 0.0883 0.299 MAIT L2
ENSG00000162511 LAPTM5 -55881 sc-eQTL 8.60e-01 0.0147 0.0834 0.299 MAIT L2
ENSG00000162517 PEF1 -943003 sc-eQTL 3.30e-01 0.0892 0.0914 0.299 MAIT L2
ENSG00000186056 MATN1-AS1 -16611 sc-eQTL 3.73e-01 0.0829 0.0927 0.299 MAIT L2
ENSG00000287510 AL137857.1 -29800 sc-eQTL 7.75e-02 -0.169 0.095 0.299 MAIT L2
ENSG00000060688 SNRNP40 -594895 sc-eQTL 2.56e-01 0.118 0.103 0.302 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 1.25e-01 -0.134 0.0872 0.302 NK_CD56bright L2
ENSG00000134644 PUM1 -364098 sc-eQTL 9.60e-01 0.00465 0.0921 0.302 NK_CD56bright L2
ENSG00000162511 LAPTM5 -55881 sc-eQTL 7.65e-01 -0.0272 0.0908 0.302 NK_CD56bright L2
ENSG00000162517 PEF1 -943003 sc-eQTL 9.77e-01 -0.00251 0.0882 0.302 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -16611 sc-eQTL 4.20e-02 -0.185 0.0903 0.302 NK_CD56bright L2
ENSG00000287510 AL137857.1 -29800 sc-eQTL 4.55e-01 -0.0672 0.0898 0.302 NK_CD56bright L2
ENSG00000060688 SNRNP40 -594895 sc-eQTL 5.78e-01 -0.0551 0.0989 0.304 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 1.65e-01 -0.102 0.0729 0.304 NK_CD56dim L2
ENSG00000134644 PUM1 -364098 sc-eQTL 8.05e-01 -0.0186 0.0751 0.304 NK_CD56dim L2
ENSG00000162511 LAPTM5 -55881 sc-eQTL 3.23e-01 -0.0791 0.0799 0.304 NK_CD56dim L2
ENSG00000162517 PEF1 -943003 sc-eQTL 1.69e-01 -0.0978 0.0709 0.304 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -16611 sc-eQTL 3.09e-01 0.102 0.1 0.304 NK_CD56dim L2
ENSG00000287510 AL137857.1 -29800 sc-eQTL 5.92e-01 0.0444 0.0827 0.304 NK_CD56dim L2
ENSG00000060688 SNRNP40 -594895 sc-eQTL 8.38e-01 -0.0214 0.104 0.306 NK_HLA L2
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 2.33e-01 0.111 0.0929 0.306 NK_HLA L2
ENSG00000134644 PUM1 -364098 sc-eQTL 4.20e-02 0.184 0.0899 0.306 NK_HLA L2
ENSG00000162511 LAPTM5 -55881 sc-eQTL 5.07e-01 0.0576 0.0866 0.306 NK_HLA L2
ENSG00000162517 PEF1 -943003 sc-eQTL 7.08e-01 -0.0367 0.0977 0.306 NK_HLA L2
ENSG00000186056 MATN1-AS1 -16611 sc-eQTL 3.31e-01 0.0897 0.092 0.306 NK_HLA L2
ENSG00000287510 AL137857.1 -29800 sc-eQTL 1.85e-01 -0.118 0.0888 0.306 NK_HLA L2
ENSG00000060688 SNRNP40 -594895 sc-eQTL 3.26e-01 -0.0954 0.0968 0.304 NK_cytokine L2
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 8.50e-01 0.0144 0.0757 0.304 NK_cytokine L2
ENSG00000134644 PUM1 -364098 sc-eQTL 6.95e-01 0.0322 0.0818 0.304 NK_cytokine L2
ENSG00000162511 LAPTM5 -55881 sc-eQTL 5.24e-01 -0.0575 0.0901 0.304 NK_cytokine L2
ENSG00000162517 PEF1 -943003 sc-eQTL 8.43e-01 0.0152 0.0768 0.304 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -16611 sc-eQTL 5.78e-01 0.0531 0.0955 0.304 NK_cytokine L2
ENSG00000287510 AL137857.1 -29800 sc-eQTL 3.28e-01 -0.087 0.0887 0.304 NK_cytokine L2
ENSG00000060688 SNRNP40 -594895 sc-eQTL 2.90e-01 -0.121 0.114 0.307 PB L2
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 9.30e-01 -0.0117 0.133 0.307 PB L2
ENSG00000134644 PUM1 -364098 sc-eQTL 6.21e-01 -0.0573 0.116 0.307 PB L2
ENSG00000162510 MATN1 -21692 sc-eQTL 3.37e-01 0.104 0.107 0.307 PB L2
ENSG00000162511 LAPTM5 -55881 sc-eQTL 5.36e-01 0.0478 0.0769 0.307 PB L2
ENSG00000162517 PEF1 -943003 sc-eQTL 9.51e-01 -0.00734 0.119 0.307 PB L2
ENSG00000186056 MATN1-AS1 -16611 sc-eQTL 1.94e-01 0.137 0.105 0.307 PB L2
ENSG00000287510 AL137857.1 -29800 sc-eQTL 2.24e-01 -0.136 0.111 0.307 PB L2
ENSG00000060688 SNRNP40 -594895 sc-eQTL 1.69e-01 -0.105 0.0764 0.298 Pro_T L2
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 4.23e-01 -0.0781 0.0972 0.298 Pro_T L2
ENSG00000134644 PUM1 -364098 sc-eQTL 1.15e-01 -0.143 0.0903 0.298 Pro_T L2
ENSG00000162511 LAPTM5 -55881 sc-eQTL 1.90e-01 0.0854 0.0649 0.298 Pro_T L2
ENSG00000162517 PEF1 -943003 sc-eQTL 4.68e-01 0.0695 0.0955 0.298 Pro_T L2
ENSG00000186056 MATN1-AS1 -16611 sc-eQTL 7.80e-01 0.0254 0.091 0.298 Pro_T L2
ENSG00000287510 AL137857.1 -29800 sc-eQTL 2.00e-01 -0.107 0.0834 0.298 Pro_T L2
ENSG00000060688 SNRNP40 -594895 sc-eQTL 6.18e-01 -0.0499 0.1 0.301 Treg L2
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 8.81e-01 0.0145 0.0968 0.301 Treg L2
ENSG00000134644 PUM1 -364098 sc-eQTL 4.43e-01 0.0595 0.0773 0.301 Treg L2
ENSG00000162511 LAPTM5 -55881 sc-eQTL 9.43e-01 -0.00634 0.0887 0.301 Treg L2
ENSG00000162517 PEF1 -943003 sc-eQTL 9.45e-01 0.00658 0.0958 0.301 Treg L2
ENSG00000186056 MATN1-AS1 -16611 sc-eQTL 1.07e-01 0.145 0.0898 0.301 Treg L2
ENSG00000287510 AL137857.1 -29800 sc-eQTL 2.89e-01 -0.0956 0.09 0.301 Treg L2
ENSG00000060688 SNRNP40 -594895 sc-eQTL 9.83e-02 -0.172 0.104 0.31 cDC L2
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 9.18e-01 0.0116 0.113 0.31 cDC L2
ENSG00000134644 PUM1 -364098 sc-eQTL 3.36e-02 0.205 0.0958 0.31 cDC L2
ENSG00000162511 LAPTM5 -55881 sc-eQTL 4.52e-01 -0.0512 0.0679 0.31 cDC L2
ENSG00000162517 PEF1 -943003 sc-eQTL 9.45e-01 0.00679 0.0985 0.31 cDC L2
ENSG00000168528 SERINC2 -707672 sc-eQTL 5.72e-01 -0.0494 0.0873 0.31 cDC L2
ENSG00000284543 LINC01226 -804333 sc-eQTL 3.02e-01 0.0885 0.0856 0.31 cDC L2
ENSG00000287510 AL137857.1 -29800 sc-eQTL 3.08e-02 -0.198 0.0912 0.31 cDC L2
ENSG00000060688 SNRNP40 -594895 sc-eQTL 4.13e-01 -0.0669 0.0816 0.301 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 4.42e-01 -0.0701 0.091 0.301 cMono_IL1B L2
ENSG00000134644 PUM1 -364098 sc-eQTL 6.47e-01 0.0283 0.0617 0.301 cMono_IL1B L2
ENSG00000162511 LAPTM5 -55881 sc-eQTL 6.64e-01 -0.0236 0.0541 0.301 cMono_IL1B L2
ENSG00000162512 SDC3 -206865 sc-eQTL 2.10e-01 -0.128 0.102 0.301 cMono_IL1B L2
ENSG00000162517 PEF1 -943003 sc-eQTL 6.03e-01 0.0433 0.0833 0.301 cMono_IL1B L2
ENSG00000168528 SERINC2 -707672 sc-eQTL 3.55e-01 -0.0954 0.103 0.301 cMono_IL1B L2
ENSG00000284543 LINC01226 -804333 sc-eQTL 7.48e-03 0.242 0.0898 0.301 cMono_IL1B L2
ENSG00000287510 AL137857.1 -29800 sc-eQTL 4.95e-01 0.0582 0.0851 0.301 cMono_IL1B L2
ENSG00000060688 SNRNP40 -594895 sc-eQTL 1.00e+00 -1.78e-05 0.086 0.301 cMono_S100A L2
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 3.61e-01 0.0929 0.101 0.301 cMono_S100A L2
ENSG00000134644 PUM1 -364098 sc-eQTL 2.36e-01 -0.0871 0.0732 0.301 cMono_S100A L2
ENSG00000162511 LAPTM5 -55881 sc-eQTL 7.96e-01 -0.0146 0.0564 0.301 cMono_S100A L2
ENSG00000162512 SDC3 -206865 sc-eQTL 4.54e-01 -0.0731 0.0974 0.301 cMono_S100A L2
ENSG00000162517 PEF1 -943003 sc-eQTL 3.55e-01 -0.0814 0.0879 0.301 cMono_S100A L2
ENSG00000168528 SERINC2 -707672 sc-eQTL 2.15e-01 -0.128 0.103 0.301 cMono_S100A L2
ENSG00000284543 LINC01226 -804333 sc-eQTL 1.08e-01 0.135 0.0833 0.301 cMono_S100A L2
ENSG00000287510 AL137857.1 -29800 sc-eQTL 9.96e-01 -0.000382 0.0842 0.301 cMono_S100A L2
ENSG00000060688 SNRNP40 -594895 sc-eQTL 5.05e-01 0.0886 0.133 0.291 gdT L2
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 4.26e-01 0.0908 0.114 0.291 gdT L2
ENSG00000134644 PUM1 -364098 sc-eQTL 5.96e-01 0.0624 0.117 0.291 gdT L2
ENSG00000162511 LAPTM5 -55881 sc-eQTL 8.75e-01 -0.0201 0.128 0.291 gdT L2
ENSG00000162517 PEF1 -943003 sc-eQTL 5.04e-01 0.0781 0.117 0.291 gdT L2
ENSG00000186056 MATN1-AS1 -16611 sc-eQTL 4.26e-01 -0.0938 0.118 0.291 gdT L2
ENSG00000287510 AL137857.1 -29800 sc-eQTL 6.06e-01 -0.059 0.114 0.291 gdT L2
ENSG00000060688 SNRNP40 -594895 sc-eQTL 7.95e-01 -0.0248 0.0954 0.307 intMono L2
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 2.50e-01 -0.118 0.102 0.307 intMono L2
ENSG00000134644 PUM1 -364098 sc-eQTL 3.45e-01 -0.0823 0.0868 0.307 intMono L2
ENSG00000162511 LAPTM5 -55881 sc-eQTL 2.04e-01 0.0866 0.068 0.307 intMono L2
ENSG00000162512 SDC3 -206865 sc-eQTL 6.25e-01 -0.0458 0.0934 0.307 intMono L2
ENSG00000162517 PEF1 -943003 sc-eQTL 1.64e-01 -0.136 0.0977 0.307 intMono L2
ENSG00000168528 SERINC2 -707672 sc-eQTL 9.29e-02 -0.164 0.0972 0.307 intMono L2
ENSG00000284543 LINC01226 -804333 sc-eQTL 4.15e-01 0.0756 0.0926 0.307 intMono L2
ENSG00000287510 AL137857.1 -29800 sc-eQTL 8.35e-01 0.0193 0.0927 0.307 intMono L2
ENSG00000060688 SNRNP40 -594895 sc-eQTL 2.70e-01 0.0992 0.0897 0.301 ncMono L2
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 1.13e-01 -0.152 0.0953 0.301 ncMono L2
ENSG00000134644 PUM1 -364098 sc-eQTL 2.34e-01 -0.0933 0.0781 0.301 ncMono L2
ENSG00000162511 LAPTM5 -55881 sc-eQTL 2.96e-01 0.0743 0.071 0.301 ncMono L2
ENSG00000162512 SDC3 -206865 sc-eQTL 2.13e-01 -0.0993 0.0795 0.301 ncMono L2
ENSG00000162517 PEF1 -943003 sc-eQTL 9.49e-02 -0.152 0.0909 0.301 ncMono L2
ENSG00000168528 SERINC2 -707672 sc-eQTL 4.64e-01 -0.0638 0.087 0.301 ncMono L2
ENSG00000284543 LINC01226 -804333 sc-eQTL 5.99e-01 -0.0458 0.0869 0.301 ncMono L2
ENSG00000287510 AL137857.1 -29800 sc-eQTL 8.82e-01 -0.0134 0.0902 0.301 ncMono L2
ENSG00000060688 SNRNP40 -594895 sc-eQTL 7.20e-01 -0.0365 0.102 0.299 pDC L2
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 6.29e-01 0.0541 0.112 0.299 pDC L2
ENSG00000134644 PUM1 -364098 sc-eQTL 7.13e-01 -0.0341 0.0926 0.299 pDC L2
ENSG00000162511 LAPTM5 -55881 sc-eQTL 2.89e-01 0.0913 0.0858 0.299 pDC L2
ENSG00000162517 PEF1 -943003 sc-eQTL 3.51e-01 -0.104 0.111 0.299 pDC L2
ENSG00000168528 SERINC2 -707672 sc-eQTL 8.70e-01 0.0171 0.104 0.299 pDC L2
ENSG00000284543 LINC01226 -804333 sc-eQTL 3.22e-01 0.0802 0.0808 0.299 pDC L2
ENSG00000287510 AL137857.1 -29800 sc-eQTL 9.98e-01 0.000204 0.0954 0.299 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -594895 sc-eQTL 5.38e-01 0.0617 0.1 0.301 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 8.91e-01 0.0114 0.0834 0.301 B_Memory LOneK1K
ENSG00000134644 PUM1 -364098 sc-eQTL 3.21e-01 0.0733 0.0737 0.301 B_Memory LOneK1K
ENSG00000162510 MATN1 -21692 sc-eQTL 7.57e-02 0.149 0.0836 0.301 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -55881 sc-eQTL 3.41e-01 0.0504 0.0528 0.301 B_Memory LOneK1K
ENSG00000162517 PEF1 -943003 sc-eQTL 9.77e-01 0.00252 0.0877 0.301 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -16611 sc-eQTL 9.36e-01 0.00566 0.07 0.301 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -29800 sc-eQTL 1.40e-01 -0.112 0.0759 0.301 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -594895 sc-eQTL 7.29e-02 -0.164 0.0911 0.301 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 9.58e-02 -0.121 0.0721 0.301 B_Naive LOneK1K
ENSG00000134644 PUM1 -364098 sc-eQTL 6.67e-01 -0.0296 0.0686 0.301 B_Naive LOneK1K
ENSG00000162510 MATN1 -21692 sc-eQTL 5.71e-01 -0.0375 0.0661 0.301 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -55881 sc-eQTL 3.63e-01 0.0423 0.0465 0.301 B_Naive LOneK1K
ENSG00000162517 PEF1 -943003 sc-eQTL 6.33e-01 -0.0406 0.085 0.301 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -16611 sc-eQTL 1.45e-01 -0.0875 0.0598 0.301 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -29800 sc-eQTL 6.85e-01 -0.029 0.0714 0.301 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -594895 sc-eQTL 3.64e-01 -0.0706 0.0775 0.301 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 8.21e-01 -0.02 0.088 0.301 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -364098 sc-eQTL 6.43e-01 -0.026 0.0561 0.301 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -55881 sc-eQTL 6.16e-01 -0.0247 0.0493 0.301 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -206865 sc-eQTL 1.78e-01 -0.136 0.1 0.301 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -943003 sc-eQTL 9.18e-01 0.00729 0.0708 0.301 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -707672 sc-eQTL 2.13e-01 -0.129 0.103 0.301 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -804333 sc-eQTL 4.76e-03 0.238 0.0833 0.301 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -29800 sc-eQTL 5.59e-01 0.0465 0.0794 0.301 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -594895 sc-eQTL 2.17e-01 0.104 0.0843 0.304 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 1.37e-01 -0.137 0.0921 0.304 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -364098 sc-eQTL 3.28e-01 -0.0743 0.0757 0.304 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -55881 sc-eQTL 1.98e-01 0.078 0.0605 0.304 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -206865 sc-eQTL 9.00e-01 -0.0112 0.0886 0.304 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -943003 sc-eQTL 2.41e-02 -0.181 0.0796 0.304 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -707672 sc-eQTL 2.32e-01 -0.11 0.0916 0.304 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -804333 sc-eQTL 5.84e-01 0.0478 0.0872 0.304 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -29800 sc-eQTL 6.93e-01 0.0346 0.0873 0.304 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -594895 sc-eQTL 5.41e-01 -0.0577 0.0942 0.304 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -595089 sc-eQTL 5.86e-01 -0.0351 0.0644 0.304 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -364098 sc-eQTL 7.87e-01 0.0191 0.0706 0.304 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -55881 sc-eQTL 4.06e-01 -0.0655 0.0787 0.304 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -943003 sc-eQTL 5.12e-01 -0.0393 0.0599 0.304 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -16611 sc-eQTL 2.23e-01 0.111 0.0907 0.304 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -29800 sc-eQTL 3.39e-01 -0.0751 0.0784 0.304 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162510 MATN1 -21692 eQTL 0.000435 0.0738 0.0209 0.00831 0.00696 0.311
ENSG00000186056 MATN1-AS1 -16611 eQTL 7.65e-05 -0.0531 0.0134 0.0 0.0 0.311

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162510 MATN1 -21692 2.73e-05 1.3e-05 2.57e-06 7.82e-06 2.34e-06 8.52e-06 1.64e-05 2.2e-06 1.07e-05 6.07e-06 1.61e-05 6.8e-06 2.21e-05 4.51e-06 4.25e-06 8.8e-06 7.02e-06 1.27e-05 2.97e-06 3.59e-06 6.83e-06 1.28e-05 1.27e-05 3.85e-06 2.14e-05 4.61e-06 7.19e-06 5.08e-06 1.37e-05 1.46e-05 7.63e-06 1.02e-06 1.29e-06 3.69e-06 5.98e-06 2.83e-06 1.79e-06 2.18e-06 2.08e-06 1.45e-06 1.1e-06 1.8e-05 2.67e-06 1.58e-07 1.15e-06 1.75e-06 2.02e-06 7.99e-07 4.95e-07