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Genes within 1Mb (chr1:30700286:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -596502 sc-eQTL 1.89e-01 -0.113 0.0857 0.301 B L1
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 2.48e-01 -0.0795 0.0687 0.301 B L1
ENSG00000134644 PUM1 -365705 sc-eQTL 8.03e-01 -0.0144 0.0578 0.301 B L1
ENSG00000162510 MATN1 -23299 sc-eQTL 8.95e-01 -0.008 0.0608 0.301 B L1
ENSG00000162511 LAPTM5 -57488 sc-eQTL 3.68e-01 0.0428 0.0475 0.301 B L1
ENSG00000162517 PEF1 -944610 sc-eQTL 9.95e-01 0.000458 0.0718 0.301 B L1
ENSG00000186056 MATN1-AS1 -18218 sc-eQTL 1.04e-01 -0.0904 0.0554 0.301 B L1
ENSG00000287510 AL137857.1 -31407 sc-eQTL 9.76e-02 -0.109 0.0656 0.301 B L1
ENSG00000060688 SNRNP40 -596502 sc-eQTL 2.52e-01 0.0845 0.0736 0.301 CD4T L1
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 5.50e-01 -0.0345 0.0576 0.301 CD4T L1
ENSG00000134644 PUM1 -365705 sc-eQTL 7.14e-01 -0.0188 0.0513 0.301 CD4T L1
ENSG00000162511 LAPTM5 -57488 sc-eQTL 7.57e-01 0.0176 0.0569 0.301 CD4T L1
ENSG00000162517 PEF1 -944610 sc-eQTL 5.30e-01 -0.0374 0.0594 0.301 CD4T L1
ENSG00000186056 MATN1-AS1 -18218 sc-eQTL 5.01e-01 -0.0342 0.0508 0.301 CD4T L1
ENSG00000287510 AL137857.1 -31407 sc-eQTL 4.87e-01 -0.0424 0.0609 0.301 CD4T L1
ENSG00000060688 SNRNP40 -596502 sc-eQTL 9.64e-01 0.00449 0.0988 0.301 CD8T L1
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 5.22e-01 0.0421 0.0657 0.301 CD8T L1
ENSG00000134644 PUM1 -365705 sc-eQTL 5.40e-01 -0.0355 0.0579 0.301 CD8T L1
ENSG00000162511 LAPTM5 -57488 sc-eQTL 1.88e-01 0.074 0.056 0.301 CD8T L1
ENSG00000162517 PEF1 -944610 sc-eQTL 2.71e-01 -0.0763 0.0691 0.301 CD8T L1
ENSG00000186056 MATN1-AS1 -18218 sc-eQTL 6.24e-01 -0.0323 0.0659 0.301 CD8T L1
ENSG00000287510 AL137857.1 -31407 sc-eQTL 8.82e-01 -0.0123 0.0828 0.301 CD8T L1
ENSG00000060688 SNRNP40 -596502 sc-eQTL 1.19e-01 -0.136 0.0869 0.306 DC L1
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 8.96e-01 -0.0136 0.104 0.306 DC L1
ENSG00000134644 PUM1 -365705 sc-eQTL 1.05e-01 0.131 0.0806 0.306 DC L1
ENSG00000162511 LAPTM5 -57488 sc-eQTL 6.54e-01 0.026 0.0579 0.306 DC L1
ENSG00000162517 PEF1 -944610 sc-eQTL 8.04e-01 -0.0233 0.0939 0.306 DC L1
ENSG00000168528 SERINC2 -709279 sc-eQTL 6.41e-01 -0.0446 0.0955 0.306 DC L1
ENSG00000284543 LINC01226 -805940 sc-eQTL 2.17e-01 0.0781 0.063 0.306 DC L1
ENSG00000287510 AL137857.1 -31407 sc-eQTL 1.01e-01 -0.15 0.091 0.306 DC L1
ENSG00000060688 SNRNP40 -596502 sc-eQTL 7.78e-01 -0.0192 0.0678 0.301 Mono L1
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 5.09e-01 -0.0556 0.084 0.301 Mono L1
ENSG00000134644 PUM1 -365705 sc-eQTL 5.59e-01 -0.0315 0.0539 0.301 Mono L1
ENSG00000162511 LAPTM5 -57488 sc-eQTL 9.50e-01 0.00309 0.0496 0.301 Mono L1
ENSG00000162512 SDC3 -208472 sc-eQTL 4.23e-01 -0.0764 0.0952 0.301 Mono L1
ENSG00000162517 PEF1 -944610 sc-eQTL 3.41e-01 -0.0636 0.0667 0.301 Mono L1
ENSG00000168528 SERINC2 -709279 sc-eQTL 1.95e-01 -0.133 0.102 0.301 Mono L1
ENSG00000284543 LINC01226 -805940 sc-eQTL 1.50e-02 0.218 0.0888 0.301 Mono L1
ENSG00000287510 AL137857.1 -31407 sc-eQTL 4.64e-01 0.0576 0.0786 0.301 Mono L1
ENSG00000060688 SNRNP40 -596502 sc-eQTL 7.56e-01 -0.0292 0.0935 0.303 NK L1
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 2.83e-01 -0.0688 0.0639 0.303 NK L1
ENSG00000134644 PUM1 -365705 sc-eQTL 8.12e-01 0.016 0.0672 0.303 NK L1
ENSG00000162511 LAPTM5 -57488 sc-eQTL 2.80e-01 -0.0835 0.0771 0.303 NK L1
ENSG00000162517 PEF1 -944610 sc-eQTL 4.36e-01 -0.044 0.0564 0.303 NK L1
ENSG00000186056 MATN1-AS1 -18218 sc-eQTL 3.92e-01 0.0743 0.0867 0.303 NK L1
ENSG00000287510 AL137857.1 -31407 sc-eQTL 7.07e-01 -0.0302 0.0802 0.303 NK L1
ENSG00000060688 SNRNP40 -596502 sc-eQTL 6.75e-01 -0.0298 0.0711 0.301 Other_T L1
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 7.30e-01 0.0262 0.076 0.301 Other_T L1
ENSG00000134644 PUM1 -365705 sc-eQTL 3.67e-01 -0.0617 0.0682 0.301 Other_T L1
ENSG00000162511 LAPTM5 -57488 sc-eQTL 1.06e-01 0.0903 0.0557 0.301 Other_T L1
ENSG00000162517 PEF1 -944610 sc-eQTL 2.90e-02 0.163 0.074 0.301 Other_T L1
ENSG00000186056 MATN1-AS1 -18218 sc-eQTL 6.49e-01 0.0418 0.0917 0.301 Other_T L1
ENSG00000287510 AL137857.1 -31407 sc-eQTL 9.67e-02 -0.158 0.0949 0.301 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -596502 sc-eQTL 3.54e-01 0.103 0.111 0.314 B_Activated L2
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 4.21e-01 0.0902 0.112 0.314 B_Activated L2
ENSG00000134644 PUM1 -365705 sc-eQTL 8.79e-01 -0.0159 0.104 0.314 B_Activated L2
ENSG00000162510 MATN1 -23299 sc-eQTL 5.90e-02 -0.171 0.0901 0.314 B_Activated L2
ENSG00000162511 LAPTM5 -57488 sc-eQTL 5.67e-01 -0.0363 0.0634 0.314 B_Activated L2
ENSG00000162517 PEF1 -944610 sc-eQTL 8.12e-01 0.0257 0.108 0.314 B_Activated L2
ENSG00000186056 MATN1-AS1 -18218 sc-eQTL 9.31e-01 0.00892 0.102 0.314 B_Activated L2
ENSG00000287510 AL137857.1 -31407 sc-eQTL 9.52e-03 -0.233 0.0889 0.314 B_Activated L2
ENSG00000060688 SNRNP40 -596502 sc-eQTL 6.57e-01 0.0469 0.105 0.303 B_Intermediate L2
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 7.21e-01 -0.0315 0.0879 0.303 B_Intermediate L2
ENSG00000134644 PUM1 -365705 sc-eQTL 7.98e-01 -0.0213 0.0829 0.303 B_Intermediate L2
ENSG00000162510 MATN1 -23299 sc-eQTL 3.34e-02 0.183 0.0854 0.303 B_Intermediate L2
ENSG00000162511 LAPTM5 -57488 sc-eQTL 8.98e-01 0.00683 0.053 0.303 B_Intermediate L2
ENSG00000162517 PEF1 -944610 sc-eQTL 7.66e-01 -0.0294 0.0984 0.303 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -18218 sc-eQTL 8.58e-01 0.0133 0.0744 0.303 B_Intermediate L2
ENSG00000287510 AL137857.1 -31407 sc-eQTL 1.77e-01 -0.112 0.0829 0.303 B_Intermediate L2
ENSG00000060688 SNRNP40 -596502 sc-eQTL 8.22e-01 -0.0232 0.103 0.302 B_Memory L2
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 4.16e-01 0.0771 0.0946 0.302 B_Memory L2
ENSG00000134644 PUM1 -365705 sc-eQTL 2.07e-01 0.104 0.0822 0.302 B_Memory L2
ENSG00000162510 MATN1 -23299 sc-eQTL 9.74e-02 0.131 0.0784 0.302 B_Memory L2
ENSG00000162511 LAPTM5 -57488 sc-eQTL 4.78e-01 0.0496 0.0699 0.302 B_Memory L2
ENSG00000162517 PEF1 -944610 sc-eQTL 9.71e-01 -0.00338 0.0934 0.302 B_Memory L2
ENSG00000186056 MATN1-AS1 -18218 sc-eQTL 8.52e-01 -0.015 0.08 0.302 B_Memory L2
ENSG00000287510 AL137857.1 -31407 sc-eQTL 4.00e-01 0.0789 0.0936 0.302 B_Memory L2
ENSG00000060688 SNRNP40 -596502 sc-eQTL 3.17e-01 -0.0943 0.0939 0.301 B_Naive1 L2
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 9.76e-01 0.00247 0.0813 0.301 B_Naive1 L2
ENSG00000134644 PUM1 -365705 sc-eQTL 2.22e-01 -0.0876 0.0715 0.301 B_Naive1 L2
ENSG00000162510 MATN1 -23299 sc-eQTL 7.85e-01 -0.0199 0.0728 0.301 B_Naive1 L2
ENSG00000162511 LAPTM5 -57488 sc-eQTL 4.81e-01 0.0343 0.0486 0.301 B_Naive1 L2
ENSG00000162517 PEF1 -944610 sc-eQTL 8.38e-01 0.0175 0.0857 0.301 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -18218 sc-eQTL 2.28e-01 -0.0769 0.0636 0.301 B_Naive1 L2
ENSG00000287510 AL137857.1 -31407 sc-eQTL 7.16e-01 -0.0287 0.0788 0.301 B_Naive1 L2
ENSG00000060688 SNRNP40 -596502 sc-eQTL 7.21e-02 -0.18 0.0994 0.3 B_Naive2 L2
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 3.80e-04 -0.29 0.0802 0.3 B_Naive2 L2
ENSG00000134644 PUM1 -365705 sc-eQTL 6.67e-01 0.0349 0.0809 0.3 B_Naive2 L2
ENSG00000162510 MATN1 -23299 sc-eQTL 8.12e-01 -0.0185 0.0777 0.3 B_Naive2 L2
ENSG00000162511 LAPTM5 -57488 sc-eQTL 5.70e-01 0.03 0.0527 0.3 B_Naive2 L2
ENSG00000162517 PEF1 -944610 sc-eQTL 2.08e-01 -0.121 0.0956 0.3 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -18218 sc-eQTL 2.80e-01 -0.0829 0.0766 0.3 B_Naive2 L2
ENSG00000287510 AL137857.1 -31407 sc-eQTL 1.93e-01 -0.108 0.0826 0.3 B_Naive2 L2
ENSG00000060688 SNRNP40 -596502 sc-eQTL 7.40e-01 0.0336 0.101 0.3 CD4_CTL L2
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 4.39e-01 0.0772 0.0994 0.3 CD4_CTL L2
ENSG00000134644 PUM1 -365705 sc-eQTL 8.73e-01 0.0156 0.0977 0.3 CD4_CTL L2
ENSG00000162511 LAPTM5 -57488 sc-eQTL 6.70e-01 0.0372 0.087 0.3 CD4_CTL L2
ENSG00000162517 PEF1 -944610 sc-eQTL 7.75e-01 0.0256 0.0892 0.3 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -18218 sc-eQTL 4.18e-01 0.0771 0.0951 0.3 CD4_CTL L2
ENSG00000287510 AL137857.1 -31407 sc-eQTL 2.58e-01 0.095 0.0838 0.3 CD4_CTL L2
ENSG00000060688 SNRNP40 -596502 sc-eQTL 8.06e-01 -0.0191 0.0778 0.301 CD4_Naive L2
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 2.07e-01 -0.087 0.0688 0.301 CD4_Naive L2
ENSG00000134644 PUM1 -365705 sc-eQTL 7.78e-01 -0.0155 0.0551 0.301 CD4_Naive L2
ENSG00000162511 LAPTM5 -57488 sc-eQTL 8.53e-01 -0.0109 0.059 0.301 CD4_Naive L2
ENSG00000162517 PEF1 -944610 sc-eQTL 3.09e-01 -0.0659 0.0646 0.301 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -18218 sc-eQTL 7.05e-02 -0.108 0.0595 0.301 CD4_Naive L2
ENSG00000287510 AL137857.1 -31407 sc-eQTL 8.59e-01 0.0122 0.0688 0.301 CD4_Naive L2
ENSG00000060688 SNRNP40 -596502 sc-eQTL 1.08e-01 0.156 0.097 0.301 CD4_TCM L2
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 6.57e-01 0.035 0.0786 0.301 CD4_TCM L2
ENSG00000134644 PUM1 -365705 sc-eQTL 9.04e-01 -0.00838 0.0696 0.301 CD4_TCM L2
ENSG00000162511 LAPTM5 -57488 sc-eQTL 2.56e-01 0.0657 0.0576 0.301 CD4_TCM L2
ENSG00000162517 PEF1 -944610 sc-eQTL 7.01e-01 -0.0298 0.0774 0.301 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -18218 sc-eQTL 7.24e-01 0.0259 0.0733 0.301 CD4_TCM L2
ENSG00000287510 AL137857.1 -31407 sc-eQTL 2.07e-01 -0.103 0.0813 0.301 CD4_TCM L2
ENSG00000060688 SNRNP40 -596502 sc-eQTL 4.18e-01 0.0778 0.0959 0.301 CD4_TEM L2
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 2.39e-01 0.108 0.0913 0.301 CD4_TEM L2
ENSG00000134644 PUM1 -365705 sc-eQTL 5.24e-01 -0.0486 0.0762 0.301 CD4_TEM L2
ENSG00000162511 LAPTM5 -57488 sc-eQTL 5.26e-01 -0.0489 0.0771 0.301 CD4_TEM L2
ENSG00000162517 PEF1 -944610 sc-eQTL 9.60e-01 -0.00431 0.0864 0.301 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -18218 sc-eQTL 9.63e-01 0.0042 0.0902 0.301 CD4_TEM L2
ENSG00000287510 AL137857.1 -31407 sc-eQTL 1.53e-01 0.127 0.0885 0.301 CD4_TEM L2
ENSG00000060688 SNRNP40 -596502 sc-eQTL 9.60e-01 0.00542 0.108 0.301 CD8_CTL L2
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 2.38e-01 -0.0975 0.0824 0.301 CD8_CTL L2
ENSG00000134644 PUM1 -365705 sc-eQTL 2.04e-01 0.102 0.0799 0.301 CD8_CTL L2
ENSG00000162511 LAPTM5 -57488 sc-eQTL 9.36e-01 0.00719 0.0889 0.301 CD8_CTL L2
ENSG00000162517 PEF1 -944610 sc-eQTL 9.05e-01 -0.00928 0.0774 0.301 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -18218 sc-eQTL 2.36e-01 -0.111 0.0931 0.301 CD8_CTL L2
ENSG00000287510 AL137857.1 -31407 sc-eQTL 6.45e-01 -0.0405 0.0878 0.301 CD8_CTL L2
ENSG00000060688 SNRNP40 -596502 sc-eQTL 5.35e-01 0.0599 0.0964 0.301 CD8_Naive L2
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 1.25e-01 0.128 0.0828 0.301 CD8_Naive L2
ENSG00000134644 PUM1 -365705 sc-eQTL 2.22e-02 -0.152 0.0661 0.301 CD8_Naive L2
ENSG00000162511 LAPTM5 -57488 sc-eQTL 2.33e-01 0.0766 0.064 0.301 CD8_Naive L2
ENSG00000162517 PEF1 -944610 sc-eQTL 5.65e-01 -0.0514 0.0891 0.301 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -18218 sc-eQTL 8.17e-01 -0.0186 0.0801 0.301 CD8_Naive L2
ENSG00000287510 AL137857.1 -31407 sc-eQTL 1.57e-01 0.123 0.0868 0.301 CD8_Naive L2
ENSG00000060688 SNRNP40 -596502 sc-eQTL 2.70e-01 0.12 0.108 0.294 CD8_TCM L2
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 6.69e-01 0.0426 0.0994 0.294 CD8_TCM L2
ENSG00000134644 PUM1 -365705 sc-eQTL 5.82e-01 -0.0515 0.0934 0.294 CD8_TCM L2
ENSG00000162511 LAPTM5 -57488 sc-eQTL 7.26e-01 -0.0344 0.0979 0.294 CD8_TCM L2
ENSG00000162517 PEF1 -944610 sc-eQTL 1.55e-01 -0.142 0.0995 0.294 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -18218 sc-eQTL 4.48e-01 0.0687 0.0905 0.294 CD8_TCM L2
ENSG00000287510 AL137857.1 -31407 sc-eQTL 1.13e-01 0.145 0.091 0.294 CD8_TCM L2
ENSG00000060688 SNRNP40 -596502 sc-eQTL 3.46e-01 -0.0979 0.104 0.299 CD8_TEM L2
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 6.56e-01 0.0444 0.0995 0.299 CD8_TEM L2
ENSG00000134644 PUM1 -365705 sc-eQTL 8.99e-01 -0.013 0.102 0.299 CD8_TEM L2
ENSG00000162511 LAPTM5 -57488 sc-eQTL 7.12e-01 -0.0353 0.0957 0.299 CD8_TEM L2
ENSG00000162517 PEF1 -944610 sc-eQTL 2.83e-01 -0.0967 0.0898 0.299 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -18218 sc-eQTL 2.61e-02 -0.22 0.0981 0.299 CD8_TEM L2
ENSG00000287510 AL137857.1 -31407 sc-eQTL 1.13e-01 -0.142 0.0893 0.299 CD8_TEM L2
ENSG00000060688 SNRNP40 -596502 sc-eQTL 7.75e-01 -0.0298 0.104 0.299 MAIT L2
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 1.67e-01 0.127 0.0918 0.299 MAIT L2
ENSG00000134644 PUM1 -365705 sc-eQTL 4.95e-01 -0.0604 0.0883 0.299 MAIT L2
ENSG00000162511 LAPTM5 -57488 sc-eQTL 8.60e-01 0.0147 0.0834 0.299 MAIT L2
ENSG00000162517 PEF1 -944610 sc-eQTL 3.30e-01 0.0892 0.0914 0.299 MAIT L2
ENSG00000186056 MATN1-AS1 -18218 sc-eQTL 3.73e-01 0.0829 0.0927 0.299 MAIT L2
ENSG00000287510 AL137857.1 -31407 sc-eQTL 7.75e-02 -0.169 0.095 0.299 MAIT L2
ENSG00000060688 SNRNP40 -596502 sc-eQTL 2.56e-01 0.118 0.103 0.302 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 1.25e-01 -0.134 0.0872 0.302 NK_CD56bright L2
ENSG00000134644 PUM1 -365705 sc-eQTL 9.60e-01 0.00465 0.0921 0.302 NK_CD56bright L2
ENSG00000162511 LAPTM5 -57488 sc-eQTL 7.65e-01 -0.0272 0.0908 0.302 NK_CD56bright L2
ENSG00000162517 PEF1 -944610 sc-eQTL 9.77e-01 -0.00251 0.0882 0.302 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -18218 sc-eQTL 4.20e-02 -0.185 0.0903 0.302 NK_CD56bright L2
ENSG00000287510 AL137857.1 -31407 sc-eQTL 4.55e-01 -0.0672 0.0898 0.302 NK_CD56bright L2
ENSG00000060688 SNRNP40 -596502 sc-eQTL 5.78e-01 -0.0551 0.0989 0.304 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 1.65e-01 -0.102 0.0729 0.304 NK_CD56dim L2
ENSG00000134644 PUM1 -365705 sc-eQTL 8.05e-01 -0.0186 0.0751 0.304 NK_CD56dim L2
ENSG00000162511 LAPTM5 -57488 sc-eQTL 3.23e-01 -0.0791 0.0799 0.304 NK_CD56dim L2
ENSG00000162517 PEF1 -944610 sc-eQTL 1.69e-01 -0.0978 0.0709 0.304 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -18218 sc-eQTL 3.09e-01 0.102 0.1 0.304 NK_CD56dim L2
ENSG00000287510 AL137857.1 -31407 sc-eQTL 5.92e-01 0.0444 0.0827 0.304 NK_CD56dim L2
ENSG00000060688 SNRNP40 -596502 sc-eQTL 8.38e-01 -0.0214 0.104 0.306 NK_HLA L2
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 2.33e-01 0.111 0.0929 0.306 NK_HLA L2
ENSG00000134644 PUM1 -365705 sc-eQTL 4.20e-02 0.184 0.0899 0.306 NK_HLA L2
ENSG00000162511 LAPTM5 -57488 sc-eQTL 5.07e-01 0.0576 0.0866 0.306 NK_HLA L2
ENSG00000162517 PEF1 -944610 sc-eQTL 7.08e-01 -0.0367 0.0977 0.306 NK_HLA L2
ENSG00000186056 MATN1-AS1 -18218 sc-eQTL 3.31e-01 0.0897 0.092 0.306 NK_HLA L2
ENSG00000287510 AL137857.1 -31407 sc-eQTL 1.85e-01 -0.118 0.0888 0.306 NK_HLA L2
ENSG00000060688 SNRNP40 -596502 sc-eQTL 3.26e-01 -0.0954 0.0968 0.304 NK_cytokine L2
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 8.50e-01 0.0144 0.0757 0.304 NK_cytokine L2
ENSG00000134644 PUM1 -365705 sc-eQTL 6.95e-01 0.0322 0.0818 0.304 NK_cytokine L2
ENSG00000162511 LAPTM5 -57488 sc-eQTL 5.24e-01 -0.0575 0.0901 0.304 NK_cytokine L2
ENSG00000162517 PEF1 -944610 sc-eQTL 8.43e-01 0.0152 0.0768 0.304 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -18218 sc-eQTL 5.78e-01 0.0531 0.0955 0.304 NK_cytokine L2
ENSG00000287510 AL137857.1 -31407 sc-eQTL 3.28e-01 -0.087 0.0887 0.304 NK_cytokine L2
ENSG00000060688 SNRNP40 -596502 sc-eQTL 2.90e-01 -0.121 0.114 0.307 PB L2
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 9.30e-01 -0.0117 0.133 0.307 PB L2
ENSG00000134644 PUM1 -365705 sc-eQTL 6.21e-01 -0.0573 0.116 0.307 PB L2
ENSG00000162510 MATN1 -23299 sc-eQTL 3.37e-01 0.104 0.107 0.307 PB L2
ENSG00000162511 LAPTM5 -57488 sc-eQTL 5.36e-01 0.0478 0.0769 0.307 PB L2
ENSG00000162517 PEF1 -944610 sc-eQTL 9.51e-01 -0.00734 0.119 0.307 PB L2
ENSG00000186056 MATN1-AS1 -18218 sc-eQTL 1.94e-01 0.137 0.105 0.307 PB L2
ENSG00000287510 AL137857.1 -31407 sc-eQTL 2.24e-01 -0.136 0.111 0.307 PB L2
ENSG00000060688 SNRNP40 -596502 sc-eQTL 1.69e-01 -0.105 0.0764 0.298 Pro_T L2
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 4.23e-01 -0.0781 0.0972 0.298 Pro_T L2
ENSG00000134644 PUM1 -365705 sc-eQTL 1.15e-01 -0.143 0.0903 0.298 Pro_T L2
ENSG00000162511 LAPTM5 -57488 sc-eQTL 1.90e-01 0.0854 0.0649 0.298 Pro_T L2
ENSG00000162517 PEF1 -944610 sc-eQTL 4.68e-01 0.0695 0.0955 0.298 Pro_T L2
ENSG00000186056 MATN1-AS1 -18218 sc-eQTL 7.80e-01 0.0254 0.091 0.298 Pro_T L2
ENSG00000287510 AL137857.1 -31407 sc-eQTL 2.00e-01 -0.107 0.0834 0.298 Pro_T L2
ENSG00000060688 SNRNP40 -596502 sc-eQTL 6.18e-01 -0.0499 0.1 0.301 Treg L2
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 8.81e-01 0.0145 0.0968 0.301 Treg L2
ENSG00000134644 PUM1 -365705 sc-eQTL 4.43e-01 0.0595 0.0773 0.301 Treg L2
ENSG00000162511 LAPTM5 -57488 sc-eQTL 9.43e-01 -0.00634 0.0887 0.301 Treg L2
ENSG00000162517 PEF1 -944610 sc-eQTL 9.45e-01 0.00658 0.0958 0.301 Treg L2
ENSG00000186056 MATN1-AS1 -18218 sc-eQTL 1.07e-01 0.145 0.0898 0.301 Treg L2
ENSG00000287510 AL137857.1 -31407 sc-eQTL 2.89e-01 -0.0956 0.09 0.301 Treg L2
ENSG00000060688 SNRNP40 -596502 sc-eQTL 9.83e-02 -0.172 0.104 0.31 cDC L2
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 9.18e-01 0.0116 0.113 0.31 cDC L2
ENSG00000134644 PUM1 -365705 sc-eQTL 3.36e-02 0.205 0.0958 0.31 cDC L2
ENSG00000162511 LAPTM5 -57488 sc-eQTL 4.52e-01 -0.0512 0.0679 0.31 cDC L2
ENSG00000162517 PEF1 -944610 sc-eQTL 9.45e-01 0.00679 0.0985 0.31 cDC L2
ENSG00000168528 SERINC2 -709279 sc-eQTL 5.72e-01 -0.0494 0.0873 0.31 cDC L2
ENSG00000284543 LINC01226 -805940 sc-eQTL 3.02e-01 0.0885 0.0856 0.31 cDC L2
ENSG00000287510 AL137857.1 -31407 sc-eQTL 3.08e-02 -0.198 0.0912 0.31 cDC L2
ENSG00000060688 SNRNP40 -596502 sc-eQTL 4.13e-01 -0.0669 0.0816 0.301 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 4.42e-01 -0.0701 0.091 0.301 cMono_IL1B L2
ENSG00000134644 PUM1 -365705 sc-eQTL 6.47e-01 0.0283 0.0617 0.301 cMono_IL1B L2
ENSG00000162511 LAPTM5 -57488 sc-eQTL 6.64e-01 -0.0236 0.0541 0.301 cMono_IL1B L2
ENSG00000162512 SDC3 -208472 sc-eQTL 2.10e-01 -0.128 0.102 0.301 cMono_IL1B L2
ENSG00000162517 PEF1 -944610 sc-eQTL 6.03e-01 0.0433 0.0833 0.301 cMono_IL1B L2
ENSG00000168528 SERINC2 -709279 sc-eQTL 3.55e-01 -0.0954 0.103 0.301 cMono_IL1B L2
ENSG00000284543 LINC01226 -805940 sc-eQTL 7.48e-03 0.242 0.0898 0.301 cMono_IL1B L2
ENSG00000287510 AL137857.1 -31407 sc-eQTL 4.95e-01 0.0582 0.0851 0.301 cMono_IL1B L2
ENSG00000060688 SNRNP40 -596502 sc-eQTL 1.00e+00 -1.78e-05 0.086 0.301 cMono_S100A L2
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 3.61e-01 0.0929 0.101 0.301 cMono_S100A L2
ENSG00000134644 PUM1 -365705 sc-eQTL 2.36e-01 -0.0871 0.0732 0.301 cMono_S100A L2
ENSG00000162511 LAPTM5 -57488 sc-eQTL 7.96e-01 -0.0146 0.0564 0.301 cMono_S100A L2
ENSG00000162512 SDC3 -208472 sc-eQTL 4.54e-01 -0.0731 0.0974 0.301 cMono_S100A L2
ENSG00000162517 PEF1 -944610 sc-eQTL 3.55e-01 -0.0814 0.0879 0.301 cMono_S100A L2
ENSG00000168528 SERINC2 -709279 sc-eQTL 2.15e-01 -0.128 0.103 0.301 cMono_S100A L2
ENSG00000284543 LINC01226 -805940 sc-eQTL 1.08e-01 0.135 0.0833 0.301 cMono_S100A L2
ENSG00000287510 AL137857.1 -31407 sc-eQTL 9.96e-01 -0.000382 0.0842 0.301 cMono_S100A L2
ENSG00000060688 SNRNP40 -596502 sc-eQTL 5.05e-01 0.0886 0.133 0.291 gdT L2
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 4.26e-01 0.0908 0.114 0.291 gdT L2
ENSG00000134644 PUM1 -365705 sc-eQTL 5.96e-01 0.0624 0.117 0.291 gdT L2
ENSG00000162511 LAPTM5 -57488 sc-eQTL 8.75e-01 -0.0201 0.128 0.291 gdT L2
ENSG00000162517 PEF1 -944610 sc-eQTL 5.04e-01 0.0781 0.117 0.291 gdT L2
ENSG00000186056 MATN1-AS1 -18218 sc-eQTL 4.26e-01 -0.0938 0.118 0.291 gdT L2
ENSG00000287510 AL137857.1 -31407 sc-eQTL 6.06e-01 -0.059 0.114 0.291 gdT L2
ENSG00000060688 SNRNP40 -596502 sc-eQTL 7.95e-01 -0.0248 0.0954 0.307 intMono L2
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 2.50e-01 -0.118 0.102 0.307 intMono L2
ENSG00000134644 PUM1 -365705 sc-eQTL 3.45e-01 -0.0823 0.0868 0.307 intMono L2
ENSG00000162511 LAPTM5 -57488 sc-eQTL 2.04e-01 0.0866 0.068 0.307 intMono L2
ENSG00000162512 SDC3 -208472 sc-eQTL 6.25e-01 -0.0458 0.0934 0.307 intMono L2
ENSG00000162517 PEF1 -944610 sc-eQTL 1.64e-01 -0.136 0.0977 0.307 intMono L2
ENSG00000168528 SERINC2 -709279 sc-eQTL 9.29e-02 -0.164 0.0972 0.307 intMono L2
ENSG00000284543 LINC01226 -805940 sc-eQTL 4.15e-01 0.0756 0.0926 0.307 intMono L2
ENSG00000287510 AL137857.1 -31407 sc-eQTL 8.35e-01 0.0193 0.0927 0.307 intMono L2
ENSG00000060688 SNRNP40 -596502 sc-eQTL 2.70e-01 0.0992 0.0897 0.301 ncMono L2
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 1.13e-01 -0.152 0.0953 0.301 ncMono L2
ENSG00000134644 PUM1 -365705 sc-eQTL 2.34e-01 -0.0933 0.0781 0.301 ncMono L2
ENSG00000162511 LAPTM5 -57488 sc-eQTL 2.96e-01 0.0743 0.071 0.301 ncMono L2
ENSG00000162512 SDC3 -208472 sc-eQTL 2.13e-01 -0.0993 0.0795 0.301 ncMono L2
ENSG00000162517 PEF1 -944610 sc-eQTL 9.49e-02 -0.152 0.0909 0.301 ncMono L2
ENSG00000168528 SERINC2 -709279 sc-eQTL 4.64e-01 -0.0638 0.087 0.301 ncMono L2
ENSG00000284543 LINC01226 -805940 sc-eQTL 5.99e-01 -0.0458 0.0869 0.301 ncMono L2
ENSG00000287510 AL137857.1 -31407 sc-eQTL 8.82e-01 -0.0134 0.0902 0.301 ncMono L2
ENSG00000060688 SNRNP40 -596502 sc-eQTL 7.20e-01 -0.0365 0.102 0.299 pDC L2
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 6.29e-01 0.0541 0.112 0.299 pDC L2
ENSG00000134644 PUM1 -365705 sc-eQTL 7.13e-01 -0.0341 0.0926 0.299 pDC L2
ENSG00000162511 LAPTM5 -57488 sc-eQTL 2.89e-01 0.0913 0.0858 0.299 pDC L2
ENSG00000162517 PEF1 -944610 sc-eQTL 3.51e-01 -0.104 0.111 0.299 pDC L2
ENSG00000168528 SERINC2 -709279 sc-eQTL 8.70e-01 0.0171 0.104 0.299 pDC L2
ENSG00000284543 LINC01226 -805940 sc-eQTL 3.22e-01 0.0802 0.0808 0.299 pDC L2
ENSG00000287510 AL137857.1 -31407 sc-eQTL 9.98e-01 0.000204 0.0954 0.299 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -596502 sc-eQTL 5.38e-01 0.0617 0.1 0.301 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 8.91e-01 0.0114 0.0834 0.301 B_Memory LOneK1K
ENSG00000134644 PUM1 -365705 sc-eQTL 3.21e-01 0.0733 0.0737 0.301 B_Memory LOneK1K
ENSG00000162510 MATN1 -23299 sc-eQTL 7.57e-02 0.149 0.0836 0.301 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -57488 sc-eQTL 3.41e-01 0.0504 0.0528 0.301 B_Memory LOneK1K
ENSG00000162517 PEF1 -944610 sc-eQTL 9.77e-01 0.00252 0.0877 0.301 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -18218 sc-eQTL 9.36e-01 0.00566 0.07 0.301 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -31407 sc-eQTL 1.40e-01 -0.112 0.0759 0.301 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -596502 sc-eQTL 7.29e-02 -0.164 0.0911 0.301 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 9.58e-02 -0.121 0.0721 0.301 B_Naive LOneK1K
ENSG00000134644 PUM1 -365705 sc-eQTL 6.67e-01 -0.0296 0.0686 0.301 B_Naive LOneK1K
ENSG00000162510 MATN1 -23299 sc-eQTL 5.71e-01 -0.0375 0.0661 0.301 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -57488 sc-eQTL 3.63e-01 0.0423 0.0465 0.301 B_Naive LOneK1K
ENSG00000162517 PEF1 -944610 sc-eQTL 6.33e-01 -0.0406 0.085 0.301 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -18218 sc-eQTL 1.45e-01 -0.0875 0.0598 0.301 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -31407 sc-eQTL 6.85e-01 -0.029 0.0714 0.301 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -596502 sc-eQTL 3.64e-01 -0.0706 0.0775 0.301 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 8.21e-01 -0.02 0.088 0.301 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -365705 sc-eQTL 6.43e-01 -0.026 0.0561 0.301 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -57488 sc-eQTL 6.16e-01 -0.0247 0.0493 0.301 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -208472 sc-eQTL 1.78e-01 -0.136 0.1 0.301 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -944610 sc-eQTL 9.18e-01 0.00729 0.0708 0.301 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -709279 sc-eQTL 2.13e-01 -0.129 0.103 0.301 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -805940 sc-eQTL 4.76e-03 0.238 0.0833 0.301 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -31407 sc-eQTL 5.59e-01 0.0465 0.0794 0.301 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -596502 sc-eQTL 2.17e-01 0.104 0.0843 0.304 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 1.37e-01 -0.137 0.0921 0.304 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -365705 sc-eQTL 3.28e-01 -0.0743 0.0757 0.304 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -57488 sc-eQTL 1.98e-01 0.078 0.0605 0.304 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -208472 sc-eQTL 9.00e-01 -0.0112 0.0886 0.304 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -944610 sc-eQTL 2.41e-02 -0.181 0.0796 0.304 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -709279 sc-eQTL 2.32e-01 -0.11 0.0916 0.304 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -805940 sc-eQTL 5.84e-01 0.0478 0.0872 0.304 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -31407 sc-eQTL 6.93e-01 0.0346 0.0873 0.304 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -596502 sc-eQTL 5.41e-01 -0.0577 0.0942 0.304 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -596696 sc-eQTL 5.86e-01 -0.0351 0.0644 0.304 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -365705 sc-eQTL 7.87e-01 0.0191 0.0706 0.304 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -57488 sc-eQTL 4.06e-01 -0.0655 0.0787 0.304 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -944610 sc-eQTL 5.12e-01 -0.0393 0.0599 0.304 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -18218 sc-eQTL 2.23e-01 0.111 0.0907 0.304 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -31407 sc-eQTL 3.39e-01 -0.0751 0.0784 0.304 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162510 MATN1 -23299 eQTL 0.000436 0.0738 0.0209 0.00828 0.00694 0.311
ENSG00000186056 MATN1-AS1 -18218 eQTL 7.39e-05 -0.0532 0.0134 0.0 0.0 0.311

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162510 MATN1 -23299 2.78e-05 2.04e-05 3.08e-06 1.03e-05 3.06e-06 8.67e-06 2.56e-05 3.34e-06 1.74e-05 8.97e-06 2.23e-05 8.71e-06 3.08e-05 7.35e-06 5.19e-06 1.03e-05 8.74e-06 1.6e-05 4.2e-06 4.2e-06 8.31e-06 1.79e-05 1.8e-05 4.97e-06 2.73e-05 5.31e-06 8.36e-06 7.64e-06 1.9e-05 1.52e-05 1.24e-05 1.2e-06 1.52e-06 4.09e-06 7.59e-06 3.78e-06 1.71e-06 2.61e-06 2.8e-06 2.1e-06 1.19e-06 2.21e-05 2.72e-06 2.2e-07 1.91e-06 2.48e-06 3.18e-06 1.26e-06 1.08e-06