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Genes within 1Mb (chr1:30697976:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -598812 sc-eQTL 4.34e-01 -0.0591 0.0754 0.491 B L1
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 3.33e-01 -0.0586 0.0604 0.491 B L1
ENSG00000134644 PUM1 -368015 sc-eQTL 9.52e-01 -0.00304 0.0507 0.491 B L1
ENSG00000162510 MATN1 -25609 sc-eQTL 3.95e-03 -0.152 0.0523 0.491 B L1
ENSG00000162511 LAPTM5 -59798 sc-eQTL 2.61e-01 0.047 0.0417 0.491 B L1
ENSG00000162517 PEF1 -946920 sc-eQTL 5.29e-01 0.0398 0.063 0.491 B L1
ENSG00000186056 MATN1-AS1 -20528 sc-eQTL 6.72e-01 -0.0208 0.0489 0.491 B L1
ENSG00000287510 AL137857.1 -33717 sc-eQTL 8.15e-01 0.0136 0.0579 0.491 B L1
ENSG00000060688 SNRNP40 -598812 sc-eQTL 5.27e-01 0.0408 0.0644 0.491 CD4T L1
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 9.33e-01 -0.00427 0.0504 0.491 CD4T L1
ENSG00000134644 PUM1 -368015 sc-eQTL 4.36e-01 -0.0349 0.0448 0.491 CD4T L1
ENSG00000162511 LAPTM5 -59798 sc-eQTL 6.85e-01 0.0202 0.0497 0.491 CD4T L1
ENSG00000162517 PEF1 -946920 sc-eQTL 8.61e-01 -0.00912 0.052 0.491 CD4T L1
ENSG00000186056 MATN1-AS1 -20528 sc-eQTL 4.61e-01 0.0328 0.0444 0.491 CD4T L1
ENSG00000287510 AL137857.1 -33717 sc-eQTL 5.41e-01 -0.0326 0.0532 0.491 CD4T L1
ENSG00000060688 SNRNP40 -598812 sc-eQTL 5.89e-01 0.046 0.085 0.491 CD8T L1
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 4.26e-01 -0.0451 0.0565 0.491 CD8T L1
ENSG00000134644 PUM1 -368015 sc-eQTL 5.64e-01 -0.0287 0.0498 0.491 CD8T L1
ENSG00000162511 LAPTM5 -59798 sc-eQTL 9.37e-01 0.0038 0.0484 0.491 CD8T L1
ENSG00000162517 PEF1 -946920 sc-eQTL 4.40e-01 -0.0461 0.0595 0.491 CD8T L1
ENSG00000186056 MATN1-AS1 -20528 sc-eQTL 6.51e-01 0.0257 0.0567 0.491 CD8T L1
ENSG00000287510 AL137857.1 -33717 sc-eQTL 9.24e-01 -0.00684 0.0712 0.491 CD8T L1
ENSG00000060688 SNRNP40 -598812 sc-eQTL 1.24e-01 -0.121 0.0782 0.5 DC L1
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 7.47e-01 -0.0301 0.0932 0.5 DC L1
ENSG00000134644 PUM1 -368015 sc-eQTL 2.37e-01 0.0863 0.0727 0.5 DC L1
ENSG00000162511 LAPTM5 -59798 sc-eQTL 1.31e-01 0.0787 0.0518 0.5 DC L1
ENSG00000162517 PEF1 -946920 sc-eQTL 8.29e-01 -0.0182 0.0845 0.5 DC L1
ENSG00000168528 SERINC2 -711589 sc-eQTL 9.28e-01 -0.00778 0.0859 0.5 DC L1
ENSG00000284543 LINC01226 -808250 sc-eQTL 6.18e-01 0.0284 0.0569 0.5 DC L1
ENSG00000287510 AL137857.1 -33717 sc-eQTL 1.25e-01 -0.126 0.0819 0.5 DC L1
ENSG00000060688 SNRNP40 -598812 sc-eQTL 4.90e-01 0.0412 0.0596 0.491 Mono L1
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 2.70e-01 -0.0816 0.0738 0.491 Mono L1
ENSG00000134644 PUM1 -368015 sc-eQTL 6.86e-01 0.0192 0.0474 0.491 Mono L1
ENSG00000162511 LAPTM5 -59798 sc-eQTL 9.38e-01 0.0034 0.0436 0.491 Mono L1
ENSG00000162512 SDC3 -210782 sc-eQTL 4.94e-01 -0.0574 0.0838 0.491 Mono L1
ENSG00000162517 PEF1 -946920 sc-eQTL 1.94e-01 -0.0763 0.0586 0.491 Mono L1
ENSG00000168528 SERINC2 -711589 sc-eQTL 3.48e-01 -0.0845 0.0898 0.491 Mono L1
ENSG00000284543 LINC01226 -808250 sc-eQTL 2.30e-01 0.0952 0.079 0.491 Mono L1
ENSG00000287510 AL137857.1 -33717 sc-eQTL 9.23e-01 0.00674 0.0693 0.491 Mono L1
ENSG00000060688 SNRNP40 -598812 sc-eQTL 1.40e-01 0.122 0.0822 0.491 NK L1
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 1.22e-01 -0.0873 0.0563 0.491 NK L1
ENSG00000134644 PUM1 -368015 sc-eQTL 4.73e-01 0.0426 0.0593 0.491 NK L1
ENSG00000162511 LAPTM5 -59798 sc-eQTL 7.28e-01 -0.0238 0.0683 0.491 NK L1
ENSG00000162517 PEF1 -946920 sc-eQTL 9.94e-01 0.000376 0.0499 0.491 NK L1
ENSG00000186056 MATN1-AS1 -20528 sc-eQTL 2.56e-01 0.0871 0.0765 0.491 NK L1
ENSG00000287510 AL137857.1 -33717 sc-eQTL 6.48e-01 0.0324 0.0708 0.491 NK L1
ENSG00000060688 SNRNP40 -598812 sc-eQTL 6.20e-01 0.0309 0.0624 0.491 Other_T L1
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 9.75e-01 -0.00207 0.0667 0.491 Other_T L1
ENSG00000134644 PUM1 -368015 sc-eQTL 2.52e-02 -0.134 0.0593 0.491 Other_T L1
ENSG00000162511 LAPTM5 -59798 sc-eQTL 8.15e-02 0.0854 0.0488 0.491 Other_T L1
ENSG00000162517 PEF1 -946920 sc-eQTL 1.16e-01 0.103 0.0653 0.491 Other_T L1
ENSG00000186056 MATN1-AS1 -20528 sc-eQTL 2.27e-01 0.0973 0.0802 0.491 Other_T L1
ENSG00000287510 AL137857.1 -33717 sc-eQTL 1.36e-01 -0.125 0.0834 0.491 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -598812 sc-eQTL 2.00e-01 0.125 0.0969 0.51 B_Activated L2
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 2.14e-01 0.122 0.0977 0.51 B_Activated L2
ENSG00000134644 PUM1 -368015 sc-eQTL 9.79e-01 -0.00242 0.0912 0.51 B_Activated L2
ENSG00000162510 MATN1 -25609 sc-eQTL 1.13e-01 -0.126 0.0792 0.51 B_Activated L2
ENSG00000162511 LAPTM5 -59798 sc-eQTL 9.70e-01 -0.00207 0.0556 0.51 B_Activated L2
ENSG00000162517 PEF1 -946920 sc-eQTL 1.29e-01 0.143 0.094 0.51 B_Activated L2
ENSG00000186056 MATN1-AS1 -20528 sc-eQTL 5.93e-01 0.0481 0.0897 0.51 B_Activated L2
ENSG00000287510 AL137857.1 -33717 sc-eQTL 3.07e-02 -0.171 0.0784 0.51 B_Activated L2
ENSG00000060688 SNRNP40 -598812 sc-eQTL 9.52e-01 0.00555 0.0931 0.491 B_Intermediate L2
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 8.54e-01 -0.0143 0.0775 0.491 B_Intermediate L2
ENSG00000134644 PUM1 -368015 sc-eQTL 5.11e-01 0.0482 0.0731 0.491 B_Intermediate L2
ENSG00000162510 MATN1 -25609 sc-eQTL 1.31e-01 0.115 0.0757 0.491 B_Intermediate L2
ENSG00000162511 LAPTM5 -59798 sc-eQTL 4.60e-01 0.0345 0.0467 0.491 B_Intermediate L2
ENSG00000162517 PEF1 -946920 sc-eQTL 5.46e-01 -0.0524 0.0867 0.491 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -20528 sc-eQTL 3.37e-01 0.063 0.0654 0.491 B_Intermediate L2
ENSG00000287510 AL137857.1 -33717 sc-eQTL 9.02e-01 0.00907 0.0734 0.491 B_Intermediate L2
ENSG00000060688 SNRNP40 -598812 sc-eQTL 5.13e-01 0.06 0.0915 0.494 B_Memory L2
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 5.43e-01 0.0514 0.0843 0.494 B_Memory L2
ENSG00000134644 PUM1 -368015 sc-eQTL 3.12e-01 0.0743 0.0733 0.494 B_Memory L2
ENSG00000162510 MATN1 -25609 sc-eQTL 8.86e-01 -0.0101 0.0703 0.494 B_Memory L2
ENSG00000162511 LAPTM5 -59798 sc-eQTL 3.59e-01 0.0571 0.0622 0.494 B_Memory L2
ENSG00000162517 PEF1 -946920 sc-eQTL 7.97e-01 0.0214 0.0832 0.494 B_Memory L2
ENSG00000186056 MATN1-AS1 -20528 sc-eQTL 6.48e-01 0.0326 0.0713 0.494 B_Memory L2
ENSG00000287510 AL137857.1 -33717 sc-eQTL 6.78e-01 0.0347 0.0835 0.494 B_Memory L2
ENSG00000060688 SNRNP40 -598812 sc-eQTL 8.49e-01 -0.0156 0.0821 0.491 B_Naive1 L2
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 4.13e-01 0.0581 0.0708 0.491 B_Naive1 L2
ENSG00000134644 PUM1 -368015 sc-eQTL 6.71e-01 -0.0266 0.0625 0.491 B_Naive1 L2
ENSG00000162510 MATN1 -25609 sc-eQTL 1.08e-03 -0.205 0.0619 0.491 B_Naive1 L2
ENSG00000162511 LAPTM5 -59798 sc-eQTL 4.07e-01 0.0351 0.0423 0.491 B_Naive1 L2
ENSG00000162517 PEF1 -946920 sc-eQTL 6.93e-01 0.0295 0.0747 0.491 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -20528 sc-eQTL 5.81e-01 -0.0308 0.0556 0.491 B_Naive1 L2
ENSG00000287510 AL137857.1 -33717 sc-eQTL 6.57e-02 0.126 0.0682 0.491 B_Naive1 L2
ENSG00000060688 SNRNP40 -598812 sc-eQTL 1.81e-01 -0.118 0.0878 0.491 B_Naive2 L2
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 1.01e-06 -0.346 0.0687 0.491 B_Naive2 L2
ENSG00000134644 PUM1 -368015 sc-eQTL 2.12e-01 -0.0889 0.071 0.491 B_Naive2 L2
ENSG00000162510 MATN1 -25609 sc-eQTL 1.85e-01 -0.0906 0.0681 0.491 B_Naive2 L2
ENSG00000162511 LAPTM5 -59798 sc-eQTL 4.87e-01 0.0323 0.0464 0.491 B_Naive2 L2
ENSG00000162517 PEF1 -946920 sc-eQTL 9.94e-01 0.000629 0.0845 0.491 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -20528 sc-eQTL 7.30e-01 0.0233 0.0676 0.491 B_Naive2 L2
ENSG00000287510 AL137857.1 -33717 sc-eQTL 1.48e-01 -0.105 0.0727 0.491 B_Naive2 L2
ENSG00000060688 SNRNP40 -598812 sc-eQTL 9.15e-01 -0.0092 0.0863 0.493 CD4_CTL L2
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 9.93e-01 0.000785 0.0849 0.493 CD4_CTL L2
ENSG00000134644 PUM1 -368015 sc-eQTL 2.16e-01 0.103 0.0829 0.493 CD4_CTL L2
ENSG00000162511 LAPTM5 -59798 sc-eQTL 8.07e-01 -0.0181 0.0742 0.493 CD4_CTL L2
ENSG00000162517 PEF1 -946920 sc-eQTL 8.95e-01 -0.0101 0.0761 0.493 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -20528 sc-eQTL 1.92e-01 0.106 0.0808 0.493 CD4_CTL L2
ENSG00000287510 AL137857.1 -33717 sc-eQTL 8.04e-01 -0.0178 0.0716 0.493 CD4_CTL L2
ENSG00000060688 SNRNP40 -598812 sc-eQTL 6.84e-01 -0.0277 0.0678 0.491 CD4_Naive L2
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 5.08e-01 -0.0399 0.0601 0.491 CD4_Naive L2
ENSG00000134644 PUM1 -368015 sc-eQTL 4.28e-01 -0.0381 0.048 0.491 CD4_Naive L2
ENSG00000162511 LAPTM5 -59798 sc-eQTL 7.28e-01 0.0179 0.0515 0.491 CD4_Naive L2
ENSG00000162517 PEF1 -946920 sc-eQTL 7.54e-01 -0.0177 0.0564 0.491 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -20528 sc-eQTL 6.00e-01 -0.0274 0.0522 0.491 CD4_Naive L2
ENSG00000287510 AL137857.1 -33717 sc-eQTL 4.43e-01 0.0461 0.0599 0.491 CD4_Naive L2
ENSG00000060688 SNRNP40 -598812 sc-eQTL 1.41e-01 0.125 0.0846 0.491 CD4_TCM L2
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 9.98e-01 0.000141 0.0686 0.491 CD4_TCM L2
ENSG00000134644 PUM1 -368015 sc-eQTL 8.00e-01 -0.0154 0.0607 0.491 CD4_TCM L2
ENSG00000162511 LAPTM5 -59798 sc-eQTL 3.49e-01 0.0471 0.0502 0.491 CD4_TCM L2
ENSG00000162517 PEF1 -946920 sc-eQTL 7.76e-01 0.0192 0.0675 0.491 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -20528 sc-eQTL 1.64e-01 0.0888 0.0636 0.491 CD4_TCM L2
ENSG00000287510 AL137857.1 -33717 sc-eQTL 4.57e-02 -0.142 0.0705 0.491 CD4_TCM L2
ENSG00000060688 SNRNP40 -598812 sc-eQTL 4.86e-01 0.0588 0.0843 0.491 CD4_TEM L2
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 3.23e-01 0.0796 0.0803 0.491 CD4_TEM L2
ENSG00000134644 PUM1 -368015 sc-eQTL 9.42e-01 -0.0049 0.067 0.491 CD4_TEM L2
ENSG00000162511 LAPTM5 -59798 sc-eQTL 6.97e-01 0.0264 0.0678 0.491 CD4_TEM L2
ENSG00000162517 PEF1 -946920 sc-eQTL 6.26e-01 -0.0371 0.0759 0.491 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -20528 sc-eQTL 7.00e-01 0.0306 0.0793 0.491 CD4_TEM L2
ENSG00000287510 AL137857.1 -33717 sc-eQTL 7.00e-01 0.0302 0.0781 0.491 CD4_TEM L2
ENSG00000060688 SNRNP40 -598812 sc-eQTL 7.07e-01 -0.0353 0.0936 0.491 CD8_CTL L2
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 2.66e-02 -0.158 0.071 0.491 CD8_CTL L2
ENSG00000134644 PUM1 -368015 sc-eQTL 3.27e-01 0.0683 0.0696 0.491 CD8_CTL L2
ENSG00000162511 LAPTM5 -59798 sc-eQTL 6.67e-01 -0.0332 0.0772 0.491 CD8_CTL L2
ENSG00000162517 PEF1 -946920 sc-eQTL 8.66e-01 -0.0113 0.0672 0.491 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -20528 sc-eQTL 7.89e-01 -0.0218 0.0811 0.491 CD8_CTL L2
ENSG00000287510 AL137857.1 -33717 sc-eQTL 3.68e-01 -0.0687 0.0762 0.491 CD8_CTL L2
ENSG00000060688 SNRNP40 -598812 sc-eQTL 1.32e-01 0.128 0.0846 0.491 CD8_Naive L2
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 7.50e-01 0.0234 0.0734 0.491 CD8_Naive L2
ENSG00000134644 PUM1 -368015 sc-eQTL 7.91e-02 -0.103 0.0586 0.491 CD8_Naive L2
ENSG00000162511 LAPTM5 -59798 sc-eQTL 2.58e-01 0.0639 0.0564 0.491 CD8_Naive L2
ENSG00000162517 PEF1 -946920 sc-eQTL 9.99e-01 -8.87e-05 0.0787 0.491 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -20528 sc-eQTL 2.47e-01 0.0818 0.0704 0.491 CD8_Naive L2
ENSG00000287510 AL137857.1 -33717 sc-eQTL 1.09e-01 0.123 0.0764 0.491 CD8_Naive L2
ENSG00000060688 SNRNP40 -598812 sc-eQTL 7.13e-01 0.0356 0.0964 0.486 CD8_TCM L2
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 3.78e-01 0.0779 0.0882 0.486 CD8_TCM L2
ENSG00000134644 PUM1 -368015 sc-eQTL 2.65e-01 -0.0927 0.0828 0.486 CD8_TCM L2
ENSG00000162511 LAPTM5 -59798 sc-eQTL 6.24e-01 -0.0427 0.0869 0.486 CD8_TCM L2
ENSG00000162517 PEF1 -946920 sc-eQTL 2.39e-01 -0.105 0.0886 0.486 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -20528 sc-eQTL 7.99e-01 0.0205 0.0805 0.486 CD8_TCM L2
ENSG00000287510 AL137857.1 -33717 sc-eQTL 3.34e-01 0.0787 0.0812 0.486 CD8_TCM L2
ENSG00000060688 SNRNP40 -598812 sc-eQTL 8.70e-01 0.0147 0.0897 0.489 CD8_TEM L2
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 3.64e-01 0.0781 0.0858 0.489 CD8_TEM L2
ENSG00000134644 PUM1 -368015 sc-eQTL 5.11e-01 -0.0578 0.0878 0.489 CD8_TEM L2
ENSG00000162511 LAPTM5 -59798 sc-eQTL 7.23e-01 -0.0293 0.0826 0.489 CD8_TEM L2
ENSG00000162517 PEF1 -946920 sc-eQTL 3.64e-01 -0.0706 0.0776 0.489 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -20528 sc-eQTL 1.00e-01 -0.141 0.0852 0.489 CD8_TEM L2
ENSG00000287510 AL137857.1 -33717 sc-eQTL 9.97e-02 -0.128 0.0771 0.489 CD8_TEM L2
ENSG00000060688 SNRNP40 -598812 sc-eQTL 4.49e-01 0.0683 0.09 0.489 MAIT L2
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 1.92e-01 0.104 0.0796 0.489 MAIT L2
ENSG00000134644 PUM1 -368015 sc-eQTL 3.19e-01 -0.0764 0.0764 0.489 MAIT L2
ENSG00000162511 LAPTM5 -59798 sc-eQTL 3.75e-01 0.0641 0.0721 0.489 MAIT L2
ENSG00000162517 PEF1 -946920 sc-eQTL 4.98e-01 0.0538 0.0793 0.489 MAIT L2
ENSG00000186056 MATN1-AS1 -20528 sc-eQTL 4.51e-01 0.0607 0.0803 0.489 MAIT L2
ENSG00000287510 AL137857.1 -33717 sc-eQTL 3.70e-02 -0.172 0.0821 0.489 MAIT L2
ENSG00000060688 SNRNP40 -598812 sc-eQTL 1.67e-01 0.128 0.0924 0.496 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 7.24e-02 -0.14 0.0778 0.496 NK_CD56bright L2
ENSG00000134644 PUM1 -368015 sc-eQTL 3.84e-01 0.0717 0.0822 0.496 NK_CD56bright L2
ENSG00000162511 LAPTM5 -59798 sc-eQTL 1.92e-01 0.106 0.0809 0.496 NK_CD56bright L2
ENSG00000162517 PEF1 -946920 sc-eQTL 8.05e-01 -0.0195 0.0789 0.496 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -20528 sc-eQTL 4.42e-01 -0.0628 0.0815 0.496 NK_CD56bright L2
ENSG00000287510 AL137857.1 -33717 sc-eQTL 7.17e-01 0.0292 0.0804 0.496 NK_CD56bright L2
ENSG00000060688 SNRNP40 -598812 sc-eQTL 6.15e-01 0.0447 0.0887 0.494 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 4.20e-02 -0.133 0.065 0.494 NK_CD56dim L2
ENSG00000134644 PUM1 -368015 sc-eQTL 9.76e-01 -0.00207 0.0673 0.494 NK_CD56dim L2
ENSG00000162511 LAPTM5 -59798 sc-eQTL 2.92e-01 -0.0756 0.0716 0.494 NK_CD56dim L2
ENSG00000162517 PEF1 -946920 sc-eQTL 3.98e-01 -0.054 0.0638 0.494 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -20528 sc-eQTL 2.36e-01 0.106 0.0896 0.494 NK_CD56dim L2
ENSG00000287510 AL137857.1 -33717 sc-eQTL 5.78e-01 0.0413 0.0742 0.494 NK_CD56dim L2
ENSG00000060688 SNRNP40 -598812 sc-eQTL 7.93e-01 0.0247 0.0941 0.5 NK_HLA L2
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 1.77e-02 0.198 0.0828 0.5 NK_HLA L2
ENSG00000134644 PUM1 -368015 sc-eQTL 3.44e-01 0.0774 0.0817 0.5 NK_HLA L2
ENSG00000162511 LAPTM5 -59798 sc-eQTL 3.36e-01 0.0752 0.078 0.5 NK_HLA L2
ENSG00000162517 PEF1 -946920 sc-eQTL 7.25e-01 -0.031 0.088 0.5 NK_HLA L2
ENSG00000186056 MATN1-AS1 -20528 sc-eQTL 7.28e-01 0.029 0.0831 0.5 NK_HLA L2
ENSG00000287510 AL137857.1 -33717 sc-eQTL 4.20e-01 -0.0648 0.0802 0.5 NK_HLA L2
ENSG00000060688 SNRNP40 -598812 sc-eQTL 9.51e-01 0.00531 0.0862 0.494 NK_cytokine L2
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 7.32e-01 -0.0231 0.0672 0.494 NK_cytokine L2
ENSG00000134644 PUM1 -368015 sc-eQTL 2.36e-01 0.0862 0.0725 0.494 NK_cytokine L2
ENSG00000162511 LAPTM5 -59798 sc-eQTL 8.99e-01 -0.0102 0.0801 0.494 NK_cytokine L2
ENSG00000162517 PEF1 -946920 sc-eQTL 9.24e-01 0.00651 0.0682 0.494 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -20528 sc-eQTL 4.41e-01 0.0654 0.0847 0.494 NK_cytokine L2
ENSG00000287510 AL137857.1 -33717 sc-eQTL 8.90e-01 -0.011 0.0789 0.494 NK_cytokine L2
ENSG00000060688 SNRNP40 -598812 sc-eQTL 4.56e-01 0.076 0.102 0.478 PB L2
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 6.91e-01 -0.0471 0.118 0.478 PB L2
ENSG00000134644 PUM1 -368015 sc-eQTL 3.92e-01 -0.0878 0.102 0.478 PB L2
ENSG00000162510 MATN1 -25609 sc-eQTL 5.50e-01 0.0573 0.0955 0.478 PB L2
ENSG00000162511 LAPTM5 -59798 sc-eQTL 9.01e-01 0.00851 0.0683 0.478 PB L2
ENSG00000162517 PEF1 -946920 sc-eQTL 4.13e-01 -0.0861 0.105 0.478 PB L2
ENSG00000186056 MATN1-AS1 -20528 sc-eQTL 1.72e-01 0.127 0.0927 0.478 PB L2
ENSG00000287510 AL137857.1 -33717 sc-eQTL 5.37e-01 -0.0615 0.0993 0.478 PB L2
ENSG00000060688 SNRNP40 -598812 sc-eQTL 8.83e-02 -0.113 0.0662 0.487 Pro_T L2
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 3.48e-01 -0.0793 0.0844 0.487 Pro_T L2
ENSG00000134644 PUM1 -368015 sc-eQTL 9.65e-02 -0.131 0.0784 0.487 Pro_T L2
ENSG00000162511 LAPTM5 -59798 sc-eQTL 5.32e-01 0.0354 0.0565 0.487 Pro_T L2
ENSG00000162517 PEF1 -946920 sc-eQTL 5.24e-01 0.0529 0.083 0.487 Pro_T L2
ENSG00000186056 MATN1-AS1 -20528 sc-eQTL 7.12e-01 -0.0292 0.0791 0.487 Pro_T L2
ENSG00000287510 AL137857.1 -33717 sc-eQTL 1.71e-01 -0.0995 0.0724 0.487 Pro_T L2
ENSG00000060688 SNRNP40 -598812 sc-eQTL 9.98e-01 -0.000176 0.0879 0.491 Treg L2
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 5.63e-01 0.0492 0.085 0.491 Treg L2
ENSG00000134644 PUM1 -368015 sc-eQTL 9.38e-01 0.00533 0.0681 0.491 Treg L2
ENSG00000162511 LAPTM5 -59798 sc-eQTL 9.97e-01 -0.000262 0.0779 0.491 Treg L2
ENSG00000162517 PEF1 -946920 sc-eQTL 9.46e-01 0.00568 0.0842 0.491 Treg L2
ENSG00000186056 MATN1-AS1 -20528 sc-eQTL 3.93e-02 0.163 0.0786 0.491 Treg L2
ENSG00000287510 AL137857.1 -33717 sc-eQTL 7.96e-01 -0.0205 0.0793 0.491 Treg L2
ENSG00000060688 SNRNP40 -598812 sc-eQTL 4.33e-01 -0.071 0.0903 0.505 cDC L2
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 9.65e-01 -0.00426 0.098 0.505 cDC L2
ENSG00000134644 PUM1 -368015 sc-eQTL 4.83e-01 0.0591 0.084 0.505 cDC L2
ENSG00000162511 LAPTM5 -59798 sc-eQTL 4.23e-01 0.0473 0.0589 0.505 cDC L2
ENSG00000162517 PEF1 -946920 sc-eQTL 8.41e-01 0.0172 0.0854 0.505 cDC L2
ENSG00000168528 SERINC2 -711589 sc-eQTL 4.76e-01 -0.054 0.0756 0.505 cDC L2
ENSG00000284543 LINC01226 -808250 sc-eQTL 7.86e-03 0.196 0.073 0.505 cDC L2
ENSG00000287510 AL137857.1 -33717 sc-eQTL 7.99e-02 -0.14 0.0794 0.505 cDC L2
ENSG00000060688 SNRNP40 -598812 sc-eQTL 5.34e-01 0.0448 0.0719 0.491 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 3.76e-01 -0.071 0.0801 0.491 cMono_IL1B L2
ENSG00000134644 PUM1 -368015 sc-eQTL 3.96e-01 0.0461 0.0542 0.491 cMono_IL1B L2
ENSG00000162511 LAPTM5 -59798 sc-eQTL 8.57e-01 -0.0086 0.0476 0.491 cMono_IL1B L2
ENSG00000162512 SDC3 -210782 sc-eQTL 2.72e-01 -0.0986 0.0895 0.491 cMono_IL1B L2
ENSG00000162517 PEF1 -946920 sc-eQTL 8.52e-01 0.0137 0.0733 0.491 cMono_IL1B L2
ENSG00000168528 SERINC2 -711589 sc-eQTL 5.75e-01 -0.051 0.0908 0.491 cMono_IL1B L2
ENSG00000284543 LINC01226 -808250 sc-eQTL 8.50e-02 0.138 0.0798 0.491 cMono_IL1B L2
ENSG00000287510 AL137857.1 -33717 sc-eQTL 9.61e-01 -0.00365 0.0749 0.491 cMono_IL1B L2
ENSG00000060688 SNRNP40 -598812 sc-eQTL 7.51e-01 0.0243 0.0763 0.491 cMono_S100A L2
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 6.29e-01 0.0436 0.0901 0.491 cMono_S100A L2
ENSG00000134644 PUM1 -368015 sc-eQTL 8.80e-01 -0.00984 0.0651 0.491 cMono_S100A L2
ENSG00000162511 LAPTM5 -59798 sc-eQTL 9.68e-01 0.00199 0.0501 0.491 cMono_S100A L2
ENSG00000162512 SDC3 -210782 sc-eQTL 6.47e-01 0.0396 0.0864 0.491 cMono_S100A L2
ENSG00000162517 PEF1 -946920 sc-eQTL 1.33e-01 -0.117 0.0777 0.491 cMono_S100A L2
ENSG00000168528 SERINC2 -711589 sc-eQTL 4.82e-01 -0.0644 0.0915 0.491 cMono_S100A L2
ENSG00000284543 LINC01226 -808250 sc-eQTL 5.39e-01 0.0458 0.0743 0.491 cMono_S100A L2
ENSG00000287510 AL137857.1 -33717 sc-eQTL 9.97e-01 0.000245 0.0747 0.491 cMono_S100A L2
ENSG00000060688 SNRNP40 -598812 sc-eQTL 5.69e-01 0.0651 0.114 0.485 gdT L2
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 6.12e-01 0.0498 0.098 0.485 gdT L2
ENSG00000134644 PUM1 -368015 sc-eQTL 5.58e-01 0.0593 0.101 0.485 gdT L2
ENSG00000162511 LAPTM5 -59798 sc-eQTL 6.30e-01 -0.053 0.11 0.485 gdT L2
ENSG00000162517 PEF1 -946920 sc-eQTL 9.07e-01 -0.0118 0.101 0.485 gdT L2
ENSG00000186056 MATN1-AS1 -20528 sc-eQTL 8.19e-01 0.0232 0.101 0.485 gdT L2
ENSG00000287510 AL137857.1 -33717 sc-eQTL 5.21e-01 -0.0631 0.0981 0.485 gdT L2
ENSG00000060688 SNRNP40 -598812 sc-eQTL 3.08e-01 0.0858 0.0839 0.498 intMono L2
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 1.31e-01 -0.136 0.09 0.498 intMono L2
ENSG00000134644 PUM1 -368015 sc-eQTL 9.92e-01 -0.000727 0.0768 0.498 intMono L2
ENSG00000162511 LAPTM5 -59798 sc-eQTL 1.40e-01 0.0888 0.0599 0.498 intMono L2
ENSG00000162512 SDC3 -210782 sc-eQTL 5.25e-01 -0.0525 0.0824 0.498 intMono L2
ENSG00000162517 PEF1 -946920 sc-eQTL 8.86e-01 -0.0125 0.0866 0.498 intMono L2
ENSG00000168528 SERINC2 -711589 sc-eQTL 2.73e-02 -0.19 0.0853 0.498 intMono L2
ENSG00000284543 LINC01226 -808250 sc-eQTL 9.23e-01 0.00788 0.0818 0.498 intMono L2
ENSG00000287510 AL137857.1 -33717 sc-eQTL 5.10e-01 0.0539 0.0817 0.498 intMono L2
ENSG00000060688 SNRNP40 -598812 sc-eQTL 5.48e-01 0.0474 0.0788 0.495 ncMono L2
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 6.68e-01 -0.036 0.084 0.495 ncMono L2
ENSG00000134644 PUM1 -368015 sc-eQTL 7.15e-01 0.0251 0.0687 0.495 ncMono L2
ENSG00000162511 LAPTM5 -59798 sc-eQTL 7.11e-01 0.0231 0.0624 0.495 ncMono L2
ENSG00000162512 SDC3 -210782 sc-eQTL 9.60e-02 -0.116 0.0695 0.495 ncMono L2
ENSG00000162517 PEF1 -946920 sc-eQTL 6.84e-01 0.0327 0.0802 0.495 ncMono L2
ENSG00000168528 SERINC2 -711589 sc-eQTL 7.15e-01 -0.0279 0.0763 0.495 ncMono L2
ENSG00000284543 LINC01226 -808250 sc-eQTL 7.17e-01 -0.0277 0.0762 0.495 ncMono L2
ENSG00000287510 AL137857.1 -33717 sc-eQTL 2.10e-01 -0.0991 0.0788 0.495 ncMono L2
ENSG00000060688 SNRNP40 -598812 sc-eQTL 4.26e-01 -0.0693 0.0869 0.497 pDC L2
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 8.50e-01 0.0181 0.0956 0.497 pDC L2
ENSG00000134644 PUM1 -368015 sc-eQTL 4.43e-01 0.0609 0.0791 0.497 pDC L2
ENSG00000162511 LAPTM5 -59798 sc-eQTL 2.42e-01 0.0862 0.0734 0.497 pDC L2
ENSG00000162517 PEF1 -946920 sc-eQTL 5.64e-01 -0.0553 0.0955 0.497 pDC L2
ENSG00000168528 SERINC2 -711589 sc-eQTL 8.41e-01 0.018 0.0894 0.497 pDC L2
ENSG00000284543 LINC01226 -808250 sc-eQTL 6.12e-01 -0.0352 0.0693 0.497 pDC L2
ENSG00000287510 AL137857.1 -33717 sc-eQTL 8.12e-01 -0.0194 0.0816 0.497 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -598812 sc-eQTL 3.01e-01 0.0911 0.0879 0.491 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 7.68e-01 0.0216 0.0733 0.491 B_Memory LOneK1K
ENSG00000134644 PUM1 -368015 sc-eQTL 2.55e-01 0.0739 0.0648 0.491 B_Memory LOneK1K
ENSG00000162510 MATN1 -25609 sc-eQTL 5.13e-01 0.0485 0.074 0.491 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -59798 sc-eQTL 8.32e-02 0.0805 0.0462 0.491 B_Memory LOneK1K
ENSG00000162517 PEF1 -946920 sc-eQTL 7.48e-01 -0.0248 0.0771 0.491 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -20528 sc-eQTL 2.17e-01 0.076 0.0614 0.491 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -33717 sc-eQTL 4.09e-01 -0.0554 0.067 0.491 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -598812 sc-eQTL 2.29e-01 -0.0964 0.0798 0.491 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 8.34e-02 -0.109 0.0629 0.491 B_Naive LOneK1K
ENSG00000134644 PUM1 -368015 sc-eQTL 4.13e-01 -0.0491 0.0598 0.491 B_Naive LOneK1K
ENSG00000162510 MATN1 -25609 sc-eQTL 6.05e-04 -0.195 0.0561 0.491 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -59798 sc-eQTL 4.53e-01 0.0305 0.0406 0.491 B_Naive LOneK1K
ENSG00000162517 PEF1 -946920 sc-eQTL 9.73e-01 0.00255 0.0742 0.491 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -20528 sc-eQTL 5.13e-01 -0.0343 0.0524 0.491 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -33717 sc-eQTL 3.47e-01 0.0586 0.0622 0.491 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -598812 sc-eQTL 8.06e-01 0.0169 0.0685 0.491 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 5.87e-01 -0.0422 0.0775 0.491 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -368015 sc-eQTL 5.33e-01 0.0309 0.0494 0.491 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -59798 sc-eQTL 8.60e-01 -0.00769 0.0435 0.491 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -210782 sc-eQTL 5.37e-01 -0.0548 0.0887 0.491 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -946920 sc-eQTL 4.24e-01 -0.0499 0.0623 0.491 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -711589 sc-eQTL 4.42e-01 -0.0703 0.0912 0.491 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -808250 sc-eQTL 8.56e-02 0.128 0.0743 0.491 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -33717 sc-eQTL 7.96e-01 0.0181 0.0701 0.491 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -598812 sc-eQTL 1.69e-01 0.103 0.0746 0.494 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 1.04e-01 -0.133 0.0815 0.494 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -368015 sc-eQTL 9.94e-01 0.000524 0.0672 0.494 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -59798 sc-eQTL 3.53e-01 0.0499 0.0536 0.494 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -210782 sc-eQTL 3.48e-01 -0.0737 0.0784 0.494 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -946920 sc-eQTL 4.51e-01 -0.0539 0.0712 0.494 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -711589 sc-eQTL 8.29e-02 -0.141 0.0808 0.494 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -808250 sc-eQTL 9.29e-01 -0.00687 0.0773 0.494 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -33717 sc-eQTL 8.69e-01 -0.0127 0.0774 0.494 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -598812 sc-eQTL 2.46e-01 0.0967 0.0832 0.494 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -599006 sc-eQTL 3.10e-01 -0.0579 0.0569 0.494 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -368015 sc-eQTL 5.72e-01 0.0354 0.0624 0.494 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -59798 sc-eQTL 6.97e-01 -0.0273 0.0698 0.494 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -946920 sc-eQTL 9.70e-01 -0.00203 0.0531 0.494 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -20528 sc-eQTL 2.04e-01 0.102 0.0802 0.494 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -33717 sc-eQTL 6.47e-01 -0.0319 0.0695 0.494 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000121766 ZCCHC17 -599006 eQTL 3.95e-02 0.0364 0.0177 0.0 0.0 0.461
ENSG00000162510 MATN1 -25609 eQTL 0.0025 0.0591 0.0195 0.00189 0.00166 0.461
ENSG00000162511 LAPTM5 -59798 eQTL 1.54e-07 -0.0519 0.00982 0.0 0.0 0.461
ENSG00000168528 SERINC2 -711589 eQTL 0.00904 0.1 0.0384 0.0 0.0 0.461

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162510 MATN1 -25609 1.25e-05 2.06e-05 2.38e-06 1.13e-05 2.44e-06 5.65e-06 1.88e-05 2.08e-06 1.42e-05 6.62e-06 1.88e-05 6.65e-06 2.87e-05 6.73e-06 4.37e-06 9e-06 6.42e-06 1.04e-05 3.34e-06 3.12e-06 6.5e-06 1.26e-05 1.29e-05 3.37e-06 2.45e-05 4.36e-06 7.16e-06 5.34e-06 1.45e-05 1.07e-05 9.85e-06 1.07e-06 1.28e-06 3.37e-06 6.33e-06 2.8e-06 1.87e-06 1.83e-06 2.2e-06 1.96e-06 8.05e-07 2.52e-05 1.6e-06 1.68e-07 7.71e-07 1.89e-06 1.75e-06 6.93e-07 4.51e-07
ENSG00000162511 LAPTM5 -59798 8.08e-06 1.29e-05 8.27e-07 7.89e-06 1.73e-06 3.52e-06 1.02e-05 1.51e-06 9.21e-06 4.47e-06 1.24e-05 4.64e-06 1.64e-05 3.95e-06 2.17e-06 6.12e-06 3.69e-06 5.05e-06 2.19e-06 2.44e-06 3.25e-06 7.96e-06 6.98e-06 1.93e-06 1.38e-05 2.31e-06 4.47e-06 3.11e-06 8.33e-06 7.76e-06 5.07e-06 4.74e-07 7.14e-07 2.54e-06 4.62e-06 2.04e-06 1.12e-06 4.38e-07 1.6e-06 1.04e-06 3.05e-07 1.51e-05 9.28e-07 1.83e-07 4.86e-07 9.76e-07 1.13e-06 6.81e-07 5.81e-07