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Genes within 1Mb (chr1:30697806:T:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -598982 sc-eQTL 9.44e-02 -0.125 0.0741 0.59 B L1
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 1.16e-01 -0.0938 0.0594 0.59 B L1
ENSG00000134644 PUM1 -368185 sc-eQTL 8.01e-01 -0.0127 0.0501 0.59 B L1
ENSG00000162510 MATN1 -25779 sc-eQTL 8.94e-03 -0.137 0.0518 0.59 B L1
ENSG00000162511 LAPTM5 -59968 sc-eQTL 1.13e-01 0.0653 0.041 0.59 B L1
ENSG00000162517 PEF1 -947090 sc-eQTL 5.64e-01 0.0359 0.0622 0.59 B L1
ENSG00000186056 MATN1-AS1 -20698 sc-eQTL 6.15e-01 -0.0243 0.0483 0.59 B L1
ENSG00000287510 AL137857.1 -33887 sc-eQTL 8.84e-01 0.00836 0.0572 0.59 B L1
ENSG00000060688 SNRNP40 -598982 sc-eQTL 9.49e-01 0.00414 0.0643 0.59 CD4T L1
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 6.64e-01 -0.0219 0.0503 0.59 CD4T L1
ENSG00000134644 PUM1 -368185 sc-eQTL 9.14e-01 0.00484 0.0448 0.59 CD4T L1
ENSG00000162511 LAPTM5 -59968 sc-eQTL 1.53e-01 0.0709 0.0494 0.59 CD4T L1
ENSG00000162517 PEF1 -947090 sc-eQTL 9.88e-01 -0.000764 0.0519 0.59 CD4T L1
ENSG00000186056 MATN1-AS1 -20698 sc-eQTL 6.29e-01 -0.0215 0.0443 0.59 CD4T L1
ENSG00000287510 AL137857.1 -33887 sc-eQTL 8.38e-01 -0.0109 0.0531 0.59 CD4T L1
ENSG00000060688 SNRNP40 -598982 sc-eQTL 7.68e-01 0.0249 0.0843 0.59 CD8T L1
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 4.72e-02 -0.111 0.0556 0.59 CD8T L1
ENSG00000134644 PUM1 -368185 sc-eQTL 2.56e-01 0.056 0.0493 0.59 CD8T L1
ENSG00000162511 LAPTM5 -59968 sc-eQTL 4.77e-02 0.0947 0.0475 0.59 CD8T L1
ENSG00000162517 PEF1 -947090 sc-eQTL 6.56e-01 -0.0264 0.0591 0.59 CD8T L1
ENSG00000186056 MATN1-AS1 -20698 sc-eQTL 9.26e-01 -0.00522 0.0562 0.59 CD8T L1
ENSG00000287510 AL137857.1 -33887 sc-eQTL 2.28e-01 0.0852 0.0704 0.59 CD8T L1
ENSG00000060688 SNRNP40 -598982 sc-eQTL 5.96e-02 -0.146 0.0772 0.599 DC L1
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 5.73e-01 -0.0521 0.0922 0.599 DC L1
ENSG00000134644 PUM1 -368185 sc-eQTL 7.31e-01 -0.0248 0.0723 0.599 DC L1
ENSG00000162511 LAPTM5 -59968 sc-eQTL 6.76e-02 0.094 0.0512 0.599 DC L1
ENSG00000162517 PEF1 -947090 sc-eQTL 9.65e-01 0.00372 0.0837 0.599 DC L1
ENSG00000168528 SERINC2 -711759 sc-eQTL 9.00e-01 -0.0107 0.0851 0.599 DC L1
ENSG00000284543 LINC01226 -808420 sc-eQTL 7.53e-01 0.0178 0.0564 0.599 DC L1
ENSG00000287510 AL137857.1 -33887 sc-eQTL 3.08e-01 -0.0833 0.0814 0.599 DC L1
ENSG00000060688 SNRNP40 -598982 sc-eQTL 4.86e-01 0.0411 0.0588 0.59 Mono L1
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 3.34e-01 -0.0706 0.0728 0.59 Mono L1
ENSG00000134644 PUM1 -368185 sc-eQTL 9.00e-01 0.00588 0.0468 0.59 Mono L1
ENSG00000162511 LAPTM5 -59968 sc-eQTL 9.42e-01 0.00311 0.043 0.59 Mono L1
ENSG00000162512 SDC3 -210952 sc-eQTL 2.94e-01 -0.0868 0.0825 0.59 Mono L1
ENSG00000162517 PEF1 -947090 sc-eQTL 2.09e-01 -0.0728 0.0578 0.59 Mono L1
ENSG00000168528 SERINC2 -711759 sc-eQTL 6.37e-01 -0.0419 0.0887 0.59 Mono L1
ENSG00000284543 LINC01226 -808420 sc-eQTL 3.89e-01 0.0673 0.078 0.59 Mono L1
ENSG00000287510 AL137857.1 -33887 sc-eQTL 2.57e-01 0.0773 0.0681 0.59 Mono L1
ENSG00000060688 SNRNP40 -598982 sc-eQTL 2.90e-02 0.178 0.0811 0.59 NK L1
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 5.42e-02 -0.108 0.0557 0.59 NK L1
ENSG00000134644 PUM1 -368185 sc-eQTL 4.95e-01 0.0403 0.0588 0.59 NK L1
ENSG00000162511 LAPTM5 -59968 sc-eQTL 3.11e-02 0.145 0.067 0.59 NK L1
ENSG00000162517 PEF1 -947090 sc-eQTL 6.54e-01 0.0222 0.0495 0.59 NK L1
ENSG00000186056 MATN1-AS1 -20698 sc-eQTL 4.41e-01 0.0588 0.0761 0.59 NK L1
ENSG00000287510 AL137857.1 -33887 sc-eQTL 8.39e-02 0.121 0.0698 0.59 NK L1
ENSG00000060688 SNRNP40 -598982 sc-eQTL 2.47e-01 0.0715 0.0616 0.59 Other_T L1
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 5.52e-01 -0.0393 0.066 0.59 Other_T L1
ENSG00000134644 PUM1 -368185 sc-eQTL 5.74e-02 -0.112 0.0589 0.59 Other_T L1
ENSG00000162511 LAPTM5 -59968 sc-eQTL 1.06e-02 0.124 0.0479 0.59 Other_T L1
ENSG00000162517 PEF1 -947090 sc-eQTL 1.41e-01 0.0955 0.0647 0.59 Other_T L1
ENSG00000186056 MATN1-AS1 -20698 sc-eQTL 4.93e-01 0.0546 0.0796 0.59 Other_T L1
ENSG00000287510 AL137857.1 -33887 sc-eQTL 5.76e-01 -0.0465 0.0829 0.59 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -598982 sc-eQTL 4.87e-01 0.069 0.099 0.599 B_Activated L2
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 4.06e-01 0.0831 0.0998 0.599 B_Activated L2
ENSG00000134644 PUM1 -368185 sc-eQTL 6.31e-01 -0.0448 0.0929 0.599 B_Activated L2
ENSG00000162510 MATN1 -25779 sc-eQTL 4.38e-01 -0.063 0.0811 0.599 B_Activated L2
ENSG00000162511 LAPTM5 -59968 sc-eQTL 9.51e-01 -0.00346 0.0567 0.599 B_Activated L2
ENSG00000162517 PEF1 -947090 sc-eQTL 2.14e-01 0.12 0.096 0.599 B_Activated L2
ENSG00000186056 MATN1-AS1 -20698 sc-eQTL 8.08e-01 0.0223 0.0915 0.599 B_Activated L2
ENSG00000287510 AL137857.1 -33887 sc-eQTL 3.78e-02 -0.167 0.0799 0.599 B_Activated L2
ENSG00000060688 SNRNP40 -598982 sc-eQTL 5.27e-01 -0.058 0.0914 0.59 B_Intermediate L2
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 6.35e-01 -0.0362 0.0762 0.59 B_Intermediate L2
ENSG00000134644 PUM1 -368185 sc-eQTL 6.77e-01 0.03 0.0719 0.59 B_Intermediate L2
ENSG00000162510 MATN1 -25779 sc-eQTL 5.42e-01 0.0457 0.0748 0.59 B_Intermediate L2
ENSG00000162511 LAPTM5 -59968 sc-eQTL 1.00e-01 0.0754 0.0457 0.59 B_Intermediate L2
ENSG00000162517 PEF1 -947090 sc-eQTL 7.46e-01 0.0277 0.0853 0.59 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -20698 sc-eQTL 3.89e-01 0.0556 0.0644 0.59 B_Intermediate L2
ENSG00000287510 AL137857.1 -33887 sc-eQTL 7.53e-01 0.0227 0.0721 0.59 B_Intermediate L2
ENSG00000060688 SNRNP40 -598982 sc-eQTL 8.04e-01 -0.0224 0.0903 0.591 B_Memory L2
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 4.75e-01 0.0595 0.0831 0.591 B_Memory L2
ENSG00000134644 PUM1 -368185 sc-eQTL 2.86e-01 0.0772 0.0722 0.591 B_Memory L2
ENSG00000162510 MATN1 -25779 sc-eQTL 6.88e-01 -0.0279 0.0693 0.591 B_Memory L2
ENSG00000162511 LAPTM5 -59968 sc-eQTL 6.63e-01 0.0267 0.0614 0.591 B_Memory L2
ENSG00000162517 PEF1 -947090 sc-eQTL 4.10e-01 0.0675 0.0819 0.591 B_Memory L2
ENSG00000186056 MATN1-AS1 -20698 sc-eQTL 8.99e-01 0.00893 0.0703 0.591 B_Memory L2
ENSG00000287510 AL137857.1 -33887 sc-eQTL 2.31e-01 0.0985 0.082 0.591 B_Memory L2
ENSG00000060688 SNRNP40 -598982 sc-eQTL 9.19e-01 -0.00837 0.0819 0.59 B_Naive1 L2
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 9.09e-01 -0.00808 0.0707 0.59 B_Naive1 L2
ENSG00000134644 PUM1 -368185 sc-eQTL 7.80e-01 0.0174 0.0623 0.59 B_Naive1 L2
ENSG00000162510 MATN1 -25779 sc-eQTL 1.12e-02 -0.159 0.0623 0.59 B_Naive1 L2
ENSG00000162511 LAPTM5 -59968 sc-eQTL 1.36e-01 0.0629 0.042 0.59 B_Naive1 L2
ENSG00000162517 PEF1 -947090 sc-eQTL 6.02e-01 0.0388 0.0745 0.59 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -20698 sc-eQTL 4.70e-01 -0.0401 0.0554 0.59 B_Naive1 L2
ENSG00000287510 AL137857.1 -33887 sc-eQTL 5.56e-02 0.131 0.068 0.59 B_Naive1 L2
ENSG00000060688 SNRNP40 -598982 sc-eQTL 3.97e-03 -0.248 0.085 0.59 B_Naive2 L2
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 1.06e-05 -0.308 0.0683 0.59 B_Naive2 L2
ENSG00000134644 PUM1 -368185 sc-eQTL 4.32e-02 -0.141 0.0694 0.59 B_Naive2 L2
ENSG00000162510 MATN1 -25779 sc-eQTL 1.59e-01 -0.0947 0.0669 0.59 B_Naive2 L2
ENSG00000162511 LAPTM5 -59968 sc-eQTL 2.16e-01 0.0565 0.0455 0.59 B_Naive2 L2
ENSG00000162517 PEF1 -947090 sc-eQTL 5.10e-01 -0.0547 0.083 0.59 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -20698 sc-eQTL 7.30e-01 -0.023 0.0665 0.59 B_Naive2 L2
ENSG00000287510 AL137857.1 -33887 sc-eQTL 2.98e-01 -0.0748 0.0716 0.59 B_Naive2 L2
ENSG00000060688 SNRNP40 -598982 sc-eQTL 2.64e-01 0.0958 0.0856 0.593 CD4_CTL L2
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 5.34e-01 -0.0526 0.0844 0.593 CD4_CTL L2
ENSG00000134644 PUM1 -368185 sc-eQTL 4.21e-01 0.0666 0.0827 0.593 CD4_CTL L2
ENSG00000162511 LAPTM5 -59968 sc-eQTL 1.64e-01 0.103 0.0735 0.593 CD4_CTL L2
ENSG00000162517 PEF1 -947090 sc-eQTL 8.54e-01 0.0139 0.0757 0.593 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -20698 sc-eQTL 2.47e-01 0.0935 0.0805 0.593 CD4_CTL L2
ENSG00000287510 AL137857.1 -33887 sc-eQTL 8.18e-01 -0.0164 0.0712 0.593 CD4_CTL L2
ENSG00000060688 SNRNP40 -598982 sc-eQTL 2.11e-01 -0.0847 0.0676 0.59 CD4_Naive L2
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 4.21e-01 -0.0484 0.0601 0.59 CD4_Naive L2
ENSG00000134644 PUM1 -368185 sc-eQTL 9.09e-01 -0.00552 0.048 0.59 CD4_Naive L2
ENSG00000162511 LAPTM5 -59968 sc-eQTL 2.42e-01 0.0602 0.0513 0.59 CD4_Naive L2
ENSG00000162517 PEF1 -947090 sc-eQTL 4.48e-01 -0.0428 0.0564 0.59 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -20698 sc-eQTL 1.10e-01 -0.0832 0.0519 0.59 CD4_Naive L2
ENSG00000287510 AL137857.1 -33887 sc-eQTL 7.11e-01 0.0223 0.06 0.59 CD4_Naive L2
ENSG00000060688 SNRNP40 -598982 sc-eQTL 3.94e-01 0.0723 0.0847 0.59 CD4_TCM L2
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 4.75e-01 -0.0489 0.0683 0.59 CD4_TCM L2
ENSG00000134644 PUM1 -368185 sc-eQTL 2.83e-01 0.065 0.0604 0.59 CD4_TCM L2
ENSG00000162511 LAPTM5 -59968 sc-eQTL 2.41e-02 0.113 0.0496 0.59 CD4_TCM L2
ENSG00000162517 PEF1 -947090 sc-eQTL 6.40e-01 0.0315 0.0673 0.59 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -20698 sc-eQTL 6.77e-01 0.0266 0.0637 0.59 CD4_TCM L2
ENSG00000287510 AL137857.1 -33887 sc-eQTL 4.17e-01 -0.0576 0.0709 0.59 CD4_TCM L2
ENSG00000060688 SNRNP40 -598982 sc-eQTL 8.73e-01 0.0135 0.0842 0.59 CD4_TEM L2
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 1.68e-01 0.11 0.0799 0.59 CD4_TEM L2
ENSG00000134644 PUM1 -368185 sc-eQTL 3.93e-01 0.0571 0.0667 0.59 CD4_TEM L2
ENSG00000162511 LAPTM5 -59968 sc-eQTL 5.76e-02 0.128 0.067 0.59 CD4_TEM L2
ENSG00000162517 PEF1 -947090 sc-eQTL 6.26e-01 -0.0369 0.0757 0.59 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -20698 sc-eQTL 5.45e-01 0.0479 0.079 0.59 CD4_TEM L2
ENSG00000287510 AL137857.1 -33887 sc-eQTL 8.84e-01 -0.0114 0.078 0.59 CD4_TEM L2
ENSG00000060688 SNRNP40 -598982 sc-eQTL 4.46e-01 -0.0704 0.0922 0.59 CD8_CTL L2
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 2.28e-02 -0.16 0.0699 0.59 CD8_CTL L2
ENSG00000134644 PUM1 -368185 sc-eQTL 1.78e-01 0.0925 0.0684 0.59 CD8_CTL L2
ENSG00000162511 LAPTM5 -59968 sc-eQTL 2.28e-01 0.0917 0.0759 0.59 CD8_CTL L2
ENSG00000162517 PEF1 -947090 sc-eQTL 3.91e-01 0.0569 0.0662 0.59 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -20698 sc-eQTL 2.33e-01 -0.0955 0.0798 0.59 CD8_CTL L2
ENSG00000287510 AL137857.1 -33887 sc-eQTL 8.76e-01 0.0117 0.0753 0.59 CD8_CTL L2
ENSG00000060688 SNRNP40 -598982 sc-eQTL 5.35e-01 0.0523 0.0842 0.59 CD8_Naive L2
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 4.32e-01 -0.0571 0.0726 0.59 CD8_Naive L2
ENSG00000134644 PUM1 -368185 sc-eQTL 7.32e-01 -0.0201 0.0585 0.59 CD8_Naive L2
ENSG00000162511 LAPTM5 -59968 sc-eQTL 5.99e-03 0.153 0.055 0.59 CD8_Naive L2
ENSG00000162517 PEF1 -947090 sc-eQTL 5.21e-01 -0.05 0.0778 0.59 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -20698 sc-eQTL 5.99e-01 0.0368 0.0699 0.59 CD8_Naive L2
ENSG00000287510 AL137857.1 -33887 sc-eQTL 1.08e-01 0.122 0.0757 0.59 CD8_Naive L2
ENSG00000060688 SNRNP40 -598982 sc-eQTL 4.36e-01 0.075 0.0962 0.588 CD8_TCM L2
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 7.14e-01 0.0324 0.0883 0.588 CD8_TCM L2
ENSG00000134644 PUM1 -368185 sc-eQTL 7.03e-01 -0.0317 0.083 0.588 CD8_TCM L2
ENSG00000162511 LAPTM5 -59968 sc-eQTL 6.10e-01 0.0444 0.0868 0.588 CD8_TCM L2
ENSG00000162517 PEF1 -947090 sc-eQTL 2.15e-01 -0.11 0.0885 0.588 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -20698 sc-eQTL 4.30e-01 -0.0636 0.0803 0.588 CD8_TCM L2
ENSG00000287510 AL137857.1 -33887 sc-eQTL 3.63e-01 0.074 0.0811 0.588 CD8_TCM L2
ENSG00000060688 SNRNP40 -598982 sc-eQTL 5.61e-01 0.0514 0.0882 0.591 CD8_TEM L2
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 5.19e-01 0.0547 0.0846 0.591 CD8_TEM L2
ENSG00000134644 PUM1 -368185 sc-eQTL 8.67e-01 -0.0145 0.0866 0.591 CD8_TEM L2
ENSG00000162511 LAPTM5 -59968 sc-eQTL 3.71e-01 0.0728 0.0812 0.591 CD8_TEM L2
ENSG00000162517 PEF1 -947090 sc-eQTL 3.29e-01 -0.0748 0.0764 0.591 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -20698 sc-eQTL 5.34e-01 -0.0526 0.0844 0.591 CD8_TEM L2
ENSG00000287510 AL137857.1 -33887 sc-eQTL 9.67e-02 -0.127 0.0759 0.591 CD8_TEM L2
ENSG00000060688 SNRNP40 -598982 sc-eQTL 4.59e-01 0.0665 0.0896 0.589 MAIT L2
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 3.38e-01 0.0762 0.0793 0.589 MAIT L2
ENSG00000134644 PUM1 -368185 sc-eQTL 5.39e-01 -0.0469 0.0761 0.589 MAIT L2
ENSG00000162511 LAPTM5 -59968 sc-eQTL 2.08e-02 0.165 0.0709 0.589 MAIT L2
ENSG00000162517 PEF1 -947090 sc-eQTL 6.61e-01 0.0347 0.0789 0.589 MAIT L2
ENSG00000186056 MATN1-AS1 -20698 sc-eQTL 8.02e-01 0.0201 0.08 0.589 MAIT L2
ENSG00000287510 AL137857.1 -33887 sc-eQTL 6.58e-02 -0.151 0.0818 0.589 MAIT L2
ENSG00000060688 SNRNP40 -598982 sc-eQTL 1.64e-01 0.127 0.091 0.596 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 3.61e-02 -0.161 0.0765 0.596 NK_CD56bright L2
ENSG00000134644 PUM1 -368185 sc-eQTL 3.49e-01 0.076 0.081 0.596 NK_CD56bright L2
ENSG00000162511 LAPTM5 -59968 sc-eQTL 5.09e-02 0.156 0.0793 0.596 NK_CD56bright L2
ENSG00000162517 PEF1 -947090 sc-eQTL 9.23e-01 -0.00749 0.0778 0.596 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -20698 sc-eQTL 7.34e-01 -0.0274 0.0804 0.596 NK_CD56bright L2
ENSG00000287510 AL137857.1 -33887 sc-eQTL 6.29e-01 -0.0383 0.0792 0.596 NK_CD56bright L2
ENSG00000060688 SNRNP40 -598982 sc-eQTL 3.67e-01 0.0789 0.0873 0.593 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 9.96e-02 -0.106 0.0642 0.593 NK_CD56dim L2
ENSG00000134644 PUM1 -368185 sc-eQTL 9.74e-01 0.00218 0.0663 0.593 NK_CD56dim L2
ENSG00000162511 LAPTM5 -59968 sc-eQTL 1.58e-01 0.0998 0.0704 0.593 NK_CD56dim L2
ENSG00000162517 PEF1 -947090 sc-eQTL 9.85e-01 0.00118 0.0629 0.593 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -20698 sc-eQTL 5.51e-01 0.0528 0.0885 0.593 NK_CD56dim L2
ENSG00000287510 AL137857.1 -33887 sc-eQTL 4.64e-02 0.145 0.0724 0.593 NK_CD56dim L2
ENSG00000060688 SNRNP40 -598982 sc-eQTL 3.54e-01 0.0861 0.0926 0.598 NK_HLA L2
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 2.47e-01 0.0958 0.0826 0.598 NK_HLA L2
ENSG00000134644 PUM1 -368185 sc-eQTL 6.87e-01 -0.0326 0.0807 0.598 NK_HLA L2
ENSG00000162511 LAPTM5 -59968 sc-eQTL 5.01e-04 0.265 0.0747 0.598 NK_HLA L2
ENSG00000162517 PEF1 -947090 sc-eQTL 3.86e-01 -0.0753 0.0867 0.598 NK_HLA L2
ENSG00000186056 MATN1-AS1 -20698 sc-eQTL 9.73e-01 -0.00277 0.082 0.598 NK_HLA L2
ENSG00000287510 AL137857.1 -33887 sc-eQTL 2.74e-01 0.0867 0.0791 0.598 NK_HLA L2
ENSG00000060688 SNRNP40 -598982 sc-eQTL 4.69e-01 0.0615 0.0848 0.593 NK_cytokine L2
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 9.10e-01 -0.00752 0.0663 0.593 NK_cytokine L2
ENSG00000134644 PUM1 -368185 sc-eQTL 2.17e-01 0.0885 0.0714 0.593 NK_cytokine L2
ENSG00000162511 LAPTM5 -59968 sc-eQTL 5.90e-02 0.149 0.0783 0.593 NK_cytokine L2
ENSG00000162517 PEF1 -947090 sc-eQTL 7.63e-01 0.0203 0.0672 0.593 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -20698 sc-eQTL 2.73e-01 0.0917 0.0834 0.593 NK_cytokine L2
ENSG00000287510 AL137857.1 -33887 sc-eQTL 9.84e-01 0.00155 0.0778 0.593 NK_cytokine L2
ENSG00000060688 SNRNP40 -598982 sc-eQTL 9.00e-01 0.0122 0.0972 0.567 PB L2
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 7.53e-01 -0.0355 0.113 0.567 PB L2
ENSG00000134644 PUM1 -368185 sc-eQTL 7.25e-01 -0.0346 0.0979 0.567 PB L2
ENSG00000162510 MATN1 -25779 sc-eQTL 9.93e-01 -0.000833 0.0913 0.567 PB L2
ENSG00000162511 LAPTM5 -59968 sc-eQTL 7.58e-01 0.0201 0.0652 0.567 PB L2
ENSG00000162517 PEF1 -947090 sc-eQTL 5.16e-01 -0.0653 0.1 0.567 PB L2
ENSG00000186056 MATN1-AS1 -20698 sc-eQTL 1.97e-01 0.115 0.0886 0.567 PB L2
ENSG00000287510 AL137857.1 -33887 sc-eQTL 8.69e-01 -0.0157 0.095 0.567 PB L2
ENSG00000060688 SNRNP40 -598982 sc-eQTL 2.35e-01 -0.0788 0.0661 0.585 Pro_T L2
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 4.49e-02 -0.168 0.0834 0.585 Pro_T L2
ENSG00000134644 PUM1 -368185 sc-eQTL 6.35e-01 -0.0374 0.0785 0.585 Pro_T L2
ENSG00000162511 LAPTM5 -59968 sc-eQTL 4.70e-01 0.0407 0.0563 0.585 Pro_T L2
ENSG00000162517 PEF1 -947090 sc-eQTL 2.58e-01 -0.0935 0.0824 0.585 Pro_T L2
ENSG00000186056 MATN1-AS1 -20698 sc-eQTL 7.81e-01 0.0219 0.0787 0.585 Pro_T L2
ENSG00000287510 AL137857.1 -33887 sc-eQTL 4.49e-01 -0.0549 0.0723 0.585 Pro_T L2
ENSG00000060688 SNRNP40 -598982 sc-eQTL 4.86e-01 0.0611 0.0876 0.59 Treg L2
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 9.03e-02 0.143 0.0842 0.59 Treg L2
ENSG00000134644 PUM1 -368185 sc-eQTL 8.79e-01 0.0103 0.0679 0.59 Treg L2
ENSG00000162511 LAPTM5 -59968 sc-eQTL 1.10e-01 0.124 0.0772 0.59 Treg L2
ENSG00000162517 PEF1 -947090 sc-eQTL 4.73e-01 -0.0602 0.0838 0.59 Treg L2
ENSG00000186056 MATN1-AS1 -20698 sc-eQTL 1.53e-01 0.113 0.0788 0.59 Treg L2
ENSG00000287510 AL137857.1 -33887 sc-eQTL 7.93e-01 0.0207 0.0791 0.59 Treg L2
ENSG00000060688 SNRNP40 -598982 sc-eQTL 5.73e-01 -0.0513 0.0909 0.607 cDC L2
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 6.56e-01 -0.0439 0.0984 0.607 cDC L2
ENSG00000134644 PUM1 -368185 sc-eQTL 8.25e-01 0.0187 0.0846 0.607 cDC L2
ENSG00000162511 LAPTM5 -59968 sc-eQTL 2.25e-01 0.0719 0.0591 0.607 cDC L2
ENSG00000162517 PEF1 -947090 sc-eQTL 4.08e-01 0.0711 0.0857 0.607 cDC L2
ENSG00000168528 SERINC2 -711759 sc-eQTL 5.35e-01 -0.0472 0.0761 0.607 cDC L2
ENSG00000284543 LINC01226 -808420 sc-eQTL 1.10e-01 0.119 0.0743 0.607 cDC L2
ENSG00000287510 AL137857.1 -33887 sc-eQTL 2.14e-01 -0.0999 0.0802 0.607 cDC L2
ENSG00000060688 SNRNP40 -598982 sc-eQTL 7.56e-01 0.0222 0.0713 0.59 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 4.33e-01 -0.0625 0.0795 0.59 cMono_IL1B L2
ENSG00000134644 PUM1 -368185 sc-eQTL 6.21e-01 0.0267 0.0538 0.59 cMono_IL1B L2
ENSG00000162511 LAPTM5 -59968 sc-eQTL 8.36e-01 -0.00983 0.0473 0.59 cMono_IL1B L2
ENSG00000162512 SDC3 -210952 sc-eQTL 4.47e-01 -0.0677 0.0889 0.59 cMono_IL1B L2
ENSG00000162517 PEF1 -947090 sc-eQTL 5.12e-01 0.0477 0.0727 0.59 cMono_IL1B L2
ENSG00000168528 SERINC2 -711759 sc-eQTL 8.40e-01 0.0182 0.0901 0.59 cMono_IL1B L2
ENSG00000284543 LINC01226 -808420 sc-eQTL 2.38e-01 0.094 0.0794 0.59 cMono_IL1B L2
ENSG00000287510 AL137857.1 -33887 sc-eQTL 2.79e-01 0.0804 0.0741 0.59 cMono_IL1B L2
ENSG00000060688 SNRNP40 -598982 sc-eQTL 4.41e-01 0.0579 0.0749 0.59 cMono_S100A L2
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 9.72e-01 0.00307 0.0887 0.59 cMono_S100A L2
ENSG00000134644 PUM1 -368185 sc-eQTL 7.85e-01 -0.0175 0.0641 0.59 cMono_S100A L2
ENSG00000162511 LAPTM5 -59968 sc-eQTL 6.39e-01 -0.0231 0.0492 0.59 cMono_S100A L2
ENSG00000162512 SDC3 -210952 sc-eQTL 8.65e-01 -0.0145 0.0851 0.59 cMono_S100A L2
ENSG00000162517 PEF1 -947090 sc-eQTL 4.89e-02 -0.151 0.0761 0.59 cMono_S100A L2
ENSG00000168528 SERINC2 -711759 sc-eQTL 6.27e-01 -0.0439 0.09 0.59 cMono_S100A L2
ENSG00000284543 LINC01226 -808420 sc-eQTL 9.17e-01 -0.00759 0.0732 0.59 cMono_S100A L2
ENSG00000287510 AL137857.1 -33887 sc-eQTL 8.08e-01 0.0179 0.0735 0.59 cMono_S100A L2
ENSG00000060688 SNRNP40 -598982 sc-eQTL 5.01e-01 0.076 0.113 0.591 gdT L2
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 4.51e-01 0.073 0.0966 0.591 gdT L2
ENSG00000134644 PUM1 -368185 sc-eQTL 9.46e-01 0.00683 0.0998 0.591 gdT L2
ENSG00000162511 LAPTM5 -59968 sc-eQTL 6.93e-01 0.0429 0.108 0.591 gdT L2
ENSG00000162517 PEF1 -947090 sc-eQTL 9.63e-01 0.00456 0.0992 0.591 gdT L2
ENSG00000186056 MATN1-AS1 -20698 sc-eQTL 8.04e-01 -0.0249 0.1 0.591 gdT L2
ENSG00000287510 AL137857.1 -33887 sc-eQTL 3.93e-01 -0.0828 0.0967 0.591 gdT L2
ENSG00000060688 SNRNP40 -598982 sc-eQTL 1.38e-01 0.123 0.0829 0.598 intMono L2
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 5.51e-01 -0.0535 0.0895 0.598 intMono L2
ENSG00000134644 PUM1 -368185 sc-eQTL 2.85e-01 -0.0812 0.0758 0.598 intMono L2
ENSG00000162511 LAPTM5 -59968 sc-eQTL 2.38e-02 0.134 0.0589 0.598 intMono L2
ENSG00000162512 SDC3 -210952 sc-eQTL 1.48e-01 -0.118 0.0812 0.598 intMono L2
ENSG00000162517 PEF1 -947090 sc-eQTL 2.85e-01 0.0916 0.0856 0.598 intMono L2
ENSG00000168528 SERINC2 -711759 sc-eQTL 3.50e-01 -0.0799 0.0853 0.598 intMono L2
ENSG00000284543 LINC01226 -808420 sc-eQTL 2.62e-01 0.0909 0.0807 0.598 intMono L2
ENSG00000287510 AL137857.1 -33887 sc-eQTL 2.55e-01 0.0922 0.0808 0.598 intMono L2
ENSG00000060688 SNRNP40 -598982 sc-eQTL 7.35e-01 0.027 0.0798 0.593 ncMono L2
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 7.31e-01 0.0292 0.0851 0.593 ncMono L2
ENSG00000134644 PUM1 -368185 sc-eQTL 8.41e-01 -0.014 0.0695 0.593 ncMono L2
ENSG00000162511 LAPTM5 -59968 sc-eQTL 9.61e-01 0.00313 0.0632 0.593 ncMono L2
ENSG00000162512 SDC3 -210952 sc-eQTL 1.48e-01 -0.102 0.0704 0.593 ncMono L2
ENSG00000162517 PEF1 -947090 sc-eQTL 9.64e-01 -0.00368 0.0812 0.593 ncMono L2
ENSG00000168528 SERINC2 -711759 sc-eQTL 6.62e-01 0.0338 0.0772 0.593 ncMono L2
ENSG00000284543 LINC01226 -808420 sc-eQTL 9.20e-01 -0.00775 0.0772 0.593 ncMono L2
ENSG00000287510 AL137857.1 -33887 sc-eQTL 6.80e-01 -0.0331 0.08 0.593 ncMono L2
ENSG00000060688 SNRNP40 -598982 sc-eQTL 1.05e-01 -0.137 0.0843 0.602 pDC L2
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 7.20e-01 0.0334 0.0932 0.602 pDC L2
ENSG00000134644 PUM1 -368185 sc-eQTL 8.90e-01 0.0107 0.0773 0.602 pDC L2
ENSG00000162511 LAPTM5 -59968 sc-eQTL 3.53e-01 0.0668 0.0717 0.602 pDC L2
ENSG00000162517 PEF1 -947090 sc-eQTL 7.77e-01 -0.0265 0.0933 0.602 pDC L2
ENSG00000168528 SERINC2 -711759 sc-eQTL 3.51e-01 0.0813 0.087 0.602 pDC L2
ENSG00000284543 LINC01226 -808420 sc-eQTL 7.71e-01 -0.0198 0.0677 0.602 pDC L2
ENSG00000287510 AL137857.1 -33887 sc-eQTL 5.71e-01 -0.0451 0.0796 0.602 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -598982 sc-eQTL 8.16e-01 -0.0203 0.0871 0.59 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 9.01e-01 0.00907 0.0725 0.59 B_Memory LOneK1K
ENSG00000134644 PUM1 -368185 sc-eQTL 3.43e-01 0.0609 0.0641 0.59 B_Memory LOneK1K
ENSG00000162510 MATN1 -25779 sc-eQTL 8.36e-01 0.0152 0.0733 0.59 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -59968 sc-eQTL 1.12e-01 0.073 0.0458 0.59 B_Memory LOneK1K
ENSG00000162517 PEF1 -947090 sc-eQTL 4.90e-01 0.0526 0.0762 0.59 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -20698 sc-eQTL 5.26e-01 0.0387 0.0608 0.59 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -33887 sc-eQTL 7.13e-01 -0.0245 0.0664 0.59 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -598982 sc-eQTL 5.56e-02 -0.152 0.0788 0.59 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 2.34e-02 -0.142 0.062 0.59 B_Naive LOneK1K
ENSG00000134644 PUM1 -368185 sc-eQTL 4.35e-01 -0.0465 0.0593 0.59 B_Naive LOneK1K
ENSG00000162510 MATN1 -25779 sc-eQTL 4.72e-03 -0.16 0.0561 0.59 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -59968 sc-eQTL 1.48e-01 0.0582 0.0401 0.59 B_Naive LOneK1K
ENSG00000162517 PEF1 -947090 sc-eQTL 9.83e-01 -0.00155 0.0735 0.59 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -20698 sc-eQTL 4.12e-01 -0.0426 0.0519 0.59 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -33887 sc-eQTL 4.34e-01 0.0483 0.0617 0.59 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -598982 sc-eQTL 6.89e-01 0.0271 0.0676 0.59 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 5.02e-01 -0.0515 0.0765 0.59 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -368185 sc-eQTL 6.55e-01 0.0218 0.0489 0.59 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -59968 sc-eQTL 7.57e-01 -0.0133 0.043 0.59 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -210952 sc-eQTL 5.43e-01 -0.0534 0.0876 0.59 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -947090 sc-eQTL 4.49e-01 -0.0466 0.0615 0.59 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -711759 sc-eQTL 7.75e-01 -0.0258 0.0901 0.59 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -808420 sc-eQTL 3.81e-01 0.0648 0.0738 0.59 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -33887 sc-eQTL 2.82e-01 0.0744 0.069 0.59 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -598982 sc-eQTL 1.27e-01 0.113 0.0741 0.593 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 4.97e-01 -0.0554 0.0815 0.593 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -368185 sc-eQTL 2.48e-01 -0.0772 0.0666 0.593 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -59968 sc-eQTL 3.18e-01 0.0534 0.0533 0.593 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -210952 sc-eQTL 7.13e-02 -0.14 0.0775 0.593 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -947090 sc-eQTL 4.59e-01 -0.0525 0.0708 0.593 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -711759 sc-eQTL 5.01e-01 -0.0545 0.0809 0.593 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -808420 sc-eQTL 5.46e-01 0.0465 0.0768 0.593 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -33887 sc-eQTL 4.42e-01 0.0592 0.0768 0.593 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -598982 sc-eQTL 4.44e-02 0.165 0.0817 0.593 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -599176 sc-eQTL 2.58e-01 -0.0637 0.0562 0.593 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -368185 sc-eQTL 5.62e-01 0.0359 0.0617 0.593 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -59968 sc-eQTL 2.96e-02 0.149 0.0682 0.593 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -947090 sc-eQTL 6.55e-01 0.0235 0.0524 0.593 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -20698 sc-eQTL 4.38e-01 0.0618 0.0795 0.593 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -33887 sc-eQTL 9.96e-02 0.113 0.0683 0.593 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162510 MATN1 -25779 eQTL 0.00841 0.0527 0.0199 0.0 0.0 0.39
ENSG00000162511 LAPTM5 -59968 eQTL 0.00633 -0.0277 0.0101 0.0 0.0 0.39
ENSG00000186056 MATN1-AS1 -20698 eQTL 3.62e-01 0.0117 0.0128 0.00178 0.0 0.39

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina