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Genes within 1Mb (chr1:30695920:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -600868 sc-eQTL 1.35e-01 0.123 0.0816 0.31 B L1
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 3.53e-01 0.0611 0.0656 0.31 B L1
ENSG00000134644 PUM1 -370071 sc-eQTL 5.00e-01 -0.0372 0.0551 0.31 B L1
ENSG00000162510 MATN1 -27665 sc-eQTL 2.87e-02 -0.126 0.0573 0.31 B L1
ENSG00000162511 LAPTM5 -61854 sc-eQTL 5.50e-01 -0.0271 0.0453 0.31 B L1
ENSG00000162517 PEF1 -948976 sc-eQTL 8.10e-01 -0.0165 0.0685 0.31 B L1
ENSG00000186056 MATN1-AS1 -22584 sc-eQTL 9.71e-02 0.088 0.0528 0.31 B L1
ENSG00000287510 AL137857.1 -35773 sc-eQTL 9.62e-02 0.104 0.0625 0.31 B L1
ENSG00000060688 SNRNP40 -600868 sc-eQTL 6.22e-01 0.0352 0.0713 0.31 CD4T L1
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 4.30e-01 0.044 0.0557 0.31 CD4T L1
ENSG00000134644 PUM1 -370071 sc-eQTL 6.56e-01 -0.0221 0.0496 0.31 CD4T L1
ENSG00000162511 LAPTM5 -61854 sc-eQTL 7.88e-01 0.0148 0.055 0.31 CD4T L1
ENSG00000162517 PEF1 -948976 sc-eQTL 3.52e-01 -0.0536 0.0574 0.31 CD4T L1
ENSG00000186056 MATN1-AS1 -22584 sc-eQTL 2.69e-02 0.108 0.0486 0.31 CD4T L1
ENSG00000287510 AL137857.1 -35773 sc-eQTL 2.90e-01 0.0623 0.0588 0.31 CD4T L1
ENSG00000060688 SNRNP40 -600868 sc-eQTL 1.81e-01 0.129 0.0961 0.31 CD8T L1
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 8.46e-01 -0.0125 0.0642 0.31 CD8T L1
ENSG00000134644 PUM1 -370071 sc-eQTL 8.33e-01 -0.012 0.0565 0.31 CD8T L1
ENSG00000162511 LAPTM5 -61854 sc-eQTL 7.72e-02 -0.0968 0.0545 0.31 CD8T L1
ENSG00000162517 PEF1 -948976 sc-eQTL 5.51e-01 0.0403 0.0676 0.31 CD8T L1
ENSG00000186056 MATN1-AS1 -22584 sc-eQTL 7.09e-02 0.116 0.0638 0.31 CD8T L1
ENSG00000287510 AL137857.1 -35773 sc-eQTL 9.07e-01 0.00948 0.0808 0.31 CD8T L1
ENSG00000060688 SNRNP40 -600868 sc-eQTL 7.11e-01 0.031 0.0835 0.318 DC L1
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 5.77e-01 -0.0552 0.0988 0.318 DC L1
ENSG00000134644 PUM1 -370071 sc-eQTL 2.13e-01 -0.0963 0.0771 0.318 DC L1
ENSG00000162511 LAPTM5 -61854 sc-eQTL 5.55e-01 0.0327 0.0552 0.318 DC L1
ENSG00000162517 PEF1 -948976 sc-eQTL 4.96e-01 0.061 0.0896 0.318 DC L1
ENSG00000168528 SERINC2 -713645 sc-eQTL 4.47e-01 0.0694 0.091 0.318 DC L1
ENSG00000284543 LINC01226 -810306 sc-eQTL 7.70e-01 -0.0177 0.0604 0.318 DC L1
ENSG00000287510 AL137857.1 -35773 sc-eQTL 9.36e-01 -0.00707 0.0874 0.318 DC L1
ENSG00000060688 SNRNP40 -600868 sc-eQTL 5.60e-01 -0.0375 0.0643 0.31 Mono L1
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 8.60e-01 -0.0141 0.0798 0.31 Mono L1
ENSG00000134644 PUM1 -370071 sc-eQTL 3.25e-01 0.0503 0.051 0.31 Mono L1
ENSG00000162511 LAPTM5 -61854 sc-eQTL 9.24e-01 -0.00447 0.047 0.31 Mono L1
ENSG00000162512 SDC3 -212838 sc-eQTL 6.09e-01 0.0463 0.0903 0.31 Mono L1
ENSG00000162517 PEF1 -948976 sc-eQTL 8.58e-01 0.0113 0.0634 0.31 Mono L1
ENSG00000168528 SERINC2 -713645 sc-eQTL 6.71e-01 0.0412 0.097 0.31 Mono L1
ENSG00000284543 LINC01226 -810306 sc-eQTL 2.57e-01 -0.0969 0.0852 0.31 Mono L1
ENSG00000287510 AL137857.1 -35773 sc-eQTL 6.87e-02 -0.136 0.0741 0.31 Mono L1
ENSG00000060688 SNRNP40 -600868 sc-eQTL 2.19e-02 0.204 0.0883 0.309 NK L1
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 9.25e-01 0.0058 0.0612 0.309 NK L1
ENSG00000134644 PUM1 -370071 sc-eQTL 4.25e-01 -0.0512 0.0641 0.309 NK L1
ENSG00000162511 LAPTM5 -61854 sc-eQTL 4.55e-01 0.0552 0.0738 0.309 NK L1
ENSG00000162517 PEF1 -948976 sc-eQTL 1.92e-01 0.0704 0.0537 0.309 NK L1
ENSG00000186056 MATN1-AS1 -22584 sc-eQTL 7.38e-01 0.0278 0.083 0.309 NK L1
ENSG00000287510 AL137857.1 -35773 sc-eQTL 2.91e-01 0.081 0.0765 0.309 NK L1
ENSG00000060688 SNRNP40 -600868 sc-eQTL 1.33e-01 0.103 0.0682 0.31 Other_T L1
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 5.67e-01 0.0419 0.0732 0.31 Other_T L1
ENSG00000134644 PUM1 -370071 sc-eQTL 5.25e-01 -0.0419 0.0658 0.31 Other_T L1
ENSG00000162511 LAPTM5 -61854 sc-eQTL 6.37e-01 -0.0255 0.054 0.31 Other_T L1
ENSG00000162517 PEF1 -948976 sc-eQTL 3.63e-01 -0.0656 0.072 0.31 Other_T L1
ENSG00000186056 MATN1-AS1 -22584 sc-eQTL 3.37e-01 0.0849 0.0882 0.31 Other_T L1
ENSG00000287510 AL137857.1 -35773 sc-eQTL 6.80e-01 -0.038 0.0921 0.31 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -600868 sc-eQTL 7.71e-01 0.0314 0.108 0.309 B_Activated L2
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 5.62e-01 0.0631 0.109 0.309 B_Activated L2
ENSG00000134644 PUM1 -370071 sc-eQTL 7.64e-01 -0.0303 0.101 0.309 B_Activated L2
ENSG00000162510 MATN1 -27665 sc-eQTL 6.63e-01 0.0386 0.0882 0.309 B_Activated L2
ENSG00000162511 LAPTM5 -61854 sc-eQTL 9.92e-01 0.000652 0.0616 0.309 B_Activated L2
ENSG00000162517 PEF1 -948976 sc-eQTL 3.89e-01 0.0903 0.105 0.309 B_Activated L2
ENSG00000186056 MATN1-AS1 -22584 sc-eQTL 7.46e-01 0.0323 0.0994 0.309 B_Activated L2
ENSG00000287510 AL137857.1 -35773 sc-eQTL 5.16e-01 0.0572 0.0879 0.309 B_Activated L2
ENSG00000060688 SNRNP40 -600868 sc-eQTL 3.35e-01 -0.0977 0.101 0.309 B_Intermediate L2
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 2.97e-01 0.0881 0.0842 0.309 B_Intermediate L2
ENSG00000134644 PUM1 -370071 sc-eQTL 6.74e-01 0.0336 0.0796 0.309 B_Intermediate L2
ENSG00000162510 MATN1 -27665 sc-eQTL 2.14e-01 -0.103 0.0826 0.309 B_Intermediate L2
ENSG00000162511 LAPTM5 -61854 sc-eQTL 9.38e-01 -0.00398 0.0509 0.309 B_Intermediate L2
ENSG00000162517 PEF1 -948976 sc-eQTL 4.80e-01 -0.0667 0.0943 0.309 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -22584 sc-eQTL 1.07e-01 0.115 0.0709 0.309 B_Intermediate L2
ENSG00000287510 AL137857.1 -35773 sc-eQTL 1.63e-01 0.111 0.0795 0.309 B_Intermediate L2
ENSG00000060688 SNRNP40 -600868 sc-eQTL 4.07e-01 0.0815 0.0981 0.31 B_Memory L2
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 9.32e-01 -0.00773 0.0905 0.31 B_Memory L2
ENSG00000134644 PUM1 -370071 sc-eQTL 9.63e-01 -0.0037 0.0788 0.31 B_Memory L2
ENSG00000162510 MATN1 -27665 sc-eQTL 3.89e-02 -0.155 0.0746 0.31 B_Memory L2
ENSG00000162511 LAPTM5 -61854 sc-eQTL 8.70e-01 -0.0109 0.0668 0.31 B_Memory L2
ENSG00000162517 PEF1 -948976 sc-eQTL 1.89e-01 0.117 0.0889 0.31 B_Memory L2
ENSG00000186056 MATN1-AS1 -22584 sc-eQTL 8.86e-01 0.011 0.0765 0.31 B_Memory L2
ENSG00000287510 AL137857.1 -35773 sc-eQTL 3.03e-01 -0.0923 0.0893 0.31 B_Memory L2
ENSG00000060688 SNRNP40 -600868 sc-eQTL 1.80e-02 0.211 0.0886 0.31 B_Naive1 L2
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 1.31e-01 0.117 0.0771 0.31 B_Naive1 L2
ENSG00000134644 PUM1 -370071 sc-eQTL 6.67e-01 0.0295 0.0684 0.31 B_Naive1 L2
ENSG00000162510 MATN1 -27665 sc-eQTL 5.86e-02 -0.131 0.0688 0.31 B_Naive1 L2
ENSG00000162511 LAPTM5 -61854 sc-eQTL 3.65e-01 -0.042 0.0463 0.31 B_Naive1 L2
ENSG00000162517 PEF1 -948976 sc-eQTL 4.09e-01 -0.0675 0.0816 0.31 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -22584 sc-eQTL 1.25e-01 0.0934 0.0606 0.31 B_Naive1 L2
ENSG00000287510 AL137857.1 -35773 sc-eQTL 2.05e-01 0.0953 0.0749 0.31 B_Naive1 L2
ENSG00000060688 SNRNP40 -600868 sc-eQTL 6.62e-02 0.176 0.0951 0.309 B_Naive2 L2
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 3.85e-01 -0.0687 0.079 0.309 B_Naive2 L2
ENSG00000134644 PUM1 -370071 sc-eQTL 8.98e-02 -0.131 0.0769 0.309 B_Naive2 L2
ENSG00000162510 MATN1 -27665 sc-eQTL 2.22e-01 -0.0909 0.0741 0.309 B_Naive2 L2
ENSG00000162511 LAPTM5 -61854 sc-eQTL 3.01e-01 -0.0522 0.0504 0.309 B_Naive2 L2
ENSG00000162517 PEF1 -948976 sc-eQTL 8.02e-02 0.16 0.0912 0.309 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -22584 sc-eQTL 6.36e-03 0.199 0.0722 0.309 B_Naive2 L2
ENSG00000287510 AL137857.1 -35773 sc-eQTL 6.81e-01 0.0326 0.0794 0.309 B_Naive2 L2
ENSG00000060688 SNRNP40 -600868 sc-eQTL 4.25e-01 -0.0778 0.0974 0.314 CD4_CTL L2
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 2.15e-01 -0.119 0.0955 0.314 CD4_CTL L2
ENSG00000134644 PUM1 -370071 sc-eQTL 2.85e-02 0.205 0.0929 0.314 CD4_CTL L2
ENSG00000162511 LAPTM5 -61854 sc-eQTL 9.35e-01 -0.00689 0.0838 0.314 CD4_CTL L2
ENSG00000162517 PEF1 -948976 sc-eQTL 4.22e-01 -0.069 0.0858 0.314 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -22584 sc-eQTL 8.27e-01 0.0201 0.0917 0.314 CD4_CTL L2
ENSG00000287510 AL137857.1 -35773 sc-eQTL 5.30e-01 0.0508 0.0809 0.314 CD4_CTL L2
ENSG00000060688 SNRNP40 -600868 sc-eQTL 7.40e-01 0.0248 0.0745 0.31 CD4_Naive L2
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 1.57e-01 0.0934 0.0657 0.31 CD4_Naive L2
ENSG00000134644 PUM1 -370071 sc-eQTL 6.72e-01 -0.0223 0.0527 0.31 CD4_Naive L2
ENSG00000162511 LAPTM5 -61854 sc-eQTL 4.66e-01 0.0412 0.0564 0.31 CD4_Naive L2
ENSG00000162517 PEF1 -948976 sc-eQTL 8.85e-01 -0.00897 0.0619 0.31 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -22584 sc-eQTL 4.62e-02 0.114 0.0568 0.31 CD4_Naive L2
ENSG00000287510 AL137857.1 -35773 sc-eQTL 3.27e-01 0.0645 0.0657 0.31 CD4_Naive L2
ENSG00000060688 SNRNP40 -600868 sc-eQTL 5.99e-01 0.049 0.0931 0.31 CD4_TCM L2
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 8.60e-01 -0.0133 0.0751 0.31 CD4_TCM L2
ENSG00000134644 PUM1 -370071 sc-eQTL 4.33e-01 -0.0522 0.0664 0.31 CD4_TCM L2
ENSG00000162511 LAPTM5 -61854 sc-eQTL 9.81e-01 0.00133 0.0551 0.31 CD4_TCM L2
ENSG00000162517 PEF1 -948976 sc-eQTL 6.98e-01 -0.0287 0.0739 0.31 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -22584 sc-eQTL 1.28e-01 0.106 0.0696 0.31 CD4_TCM L2
ENSG00000287510 AL137857.1 -35773 sc-eQTL 6.40e-01 0.0365 0.0779 0.31 CD4_TCM L2
ENSG00000060688 SNRNP40 -600868 sc-eQTL 2.42e-01 0.109 0.0927 0.31 CD4_TEM L2
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 4.22e-01 -0.0713 0.0885 0.31 CD4_TEM L2
ENSG00000134644 PUM1 -370071 sc-eQTL 4.80e-01 0.0522 0.0738 0.31 CD4_TEM L2
ENSG00000162511 LAPTM5 -61854 sc-eQTL 1.81e-01 0.0999 0.0744 0.31 CD4_TEM L2
ENSG00000162517 PEF1 -948976 sc-eQTL 6.82e-01 -0.0343 0.0837 0.31 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -22584 sc-eQTL 5.69e-01 0.0498 0.0873 0.31 CD4_TEM L2
ENSG00000287510 AL137857.1 -35773 sc-eQTL 5.22e-01 -0.0552 0.086 0.31 CD4_TEM L2
ENSG00000060688 SNRNP40 -600868 sc-eQTL 7.94e-01 -0.0266 0.102 0.31 CD8_CTL L2
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 9.00e-01 0.00979 0.0781 0.31 CD8_CTL L2
ENSG00000134644 PUM1 -370071 sc-eQTL 5.64e-01 -0.0438 0.0758 0.31 CD8_CTL L2
ENSG00000162511 LAPTM5 -61854 sc-eQTL 5.29e-01 0.0529 0.0839 0.31 CD8_CTL L2
ENSG00000162517 PEF1 -948976 sc-eQTL 7.81e-01 0.0203 0.0731 0.31 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -22584 sc-eQTL 1.61e-02 0.211 0.0871 0.31 CD8_CTL L2
ENSG00000287510 AL137857.1 -35773 sc-eQTL 4.90e-01 -0.0574 0.083 0.31 CD8_CTL L2
ENSG00000060688 SNRNP40 -600868 sc-eQTL 9.43e-02 0.156 0.093 0.31 CD8_Naive L2
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 3.42e-01 -0.0767 0.0806 0.31 CD8_Naive L2
ENSG00000134644 PUM1 -370071 sc-eQTL 3.66e-01 0.0587 0.0649 0.31 CD8_Naive L2
ENSG00000162511 LAPTM5 -61854 sc-eQTL 1.20e-01 -0.0966 0.0619 0.31 CD8_Naive L2
ENSG00000162517 PEF1 -948976 sc-eQTL 2.43e-01 0.101 0.0863 0.31 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -22584 sc-eQTL 1.41e-02 0.19 0.0767 0.31 CD8_Naive L2
ENSG00000287510 AL137857.1 -35773 sc-eQTL 8.36e-01 0.0175 0.0846 0.31 CD8_Naive L2
ENSG00000060688 SNRNP40 -600868 sc-eQTL 5.49e-01 -0.0624 0.104 0.315 CD8_TCM L2
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 3.70e-01 0.0856 0.0952 0.315 CD8_TCM L2
ENSG00000134644 PUM1 -370071 sc-eQTL 8.38e-01 -0.0184 0.0897 0.315 CD8_TCM L2
ENSG00000162511 LAPTM5 -61854 sc-eQTL 6.87e-01 -0.0379 0.0939 0.315 CD8_TCM L2
ENSG00000162517 PEF1 -948976 sc-eQTL 6.16e-01 0.0482 0.0959 0.315 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -22584 sc-eQTL 9.86e-01 -0.00148 0.0869 0.315 CD8_TCM L2
ENSG00000287510 AL137857.1 -35773 sc-eQTL 4.02e-01 -0.0737 0.0877 0.315 CD8_TCM L2
ENSG00000060688 SNRNP40 -600868 sc-eQTL 1.17e-01 0.154 0.0978 0.311 CD8_TEM L2
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 9.96e-01 0.000432 0.0943 0.311 CD8_TEM L2
ENSG00000134644 PUM1 -370071 sc-eQTL 8.55e-01 -0.0176 0.0964 0.311 CD8_TEM L2
ENSG00000162511 LAPTM5 -61854 sc-eQTL 4.93e-01 -0.0622 0.0905 0.311 CD8_TEM L2
ENSG00000162517 PEF1 -948976 sc-eQTL 7.20e-01 -0.0306 0.0853 0.311 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -22584 sc-eQTL 1.98e-01 0.121 0.0937 0.311 CD8_TEM L2
ENSG00000287510 AL137857.1 -35773 sc-eQTL 1.73e-01 0.116 0.0848 0.311 CD8_TEM L2
ENSG00000060688 SNRNP40 -600868 sc-eQTL 2.10e-01 0.126 0.1 0.31 MAIT L2
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 7.68e-01 0.0263 0.0892 0.31 MAIT L2
ENSG00000134644 PUM1 -370071 sc-eQTL 7.63e-01 0.0258 0.0855 0.31 MAIT L2
ENSG00000162511 LAPTM5 -61854 sc-eQTL 3.06e-01 0.0825 0.0804 0.31 MAIT L2
ENSG00000162517 PEF1 -948976 sc-eQTL 9.54e-01 -0.00509 0.0886 0.31 MAIT L2
ENSG00000186056 MATN1-AS1 -22584 sc-eQTL 6.60e-01 -0.0396 0.0898 0.31 MAIT L2
ENSG00000287510 AL137857.1 -35773 sc-eQTL 8.44e-01 -0.0182 0.0925 0.31 MAIT L2
ENSG00000060688 SNRNP40 -600868 sc-eQTL 6.31e-01 0.0482 0.1 0.309 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 5.61e-01 0.0493 0.0846 0.309 NK_CD56bright L2
ENSG00000134644 PUM1 -370071 sc-eQTL 2.80e-01 -0.096 0.0887 0.309 NK_CD56bright L2
ENSG00000162511 LAPTM5 -61854 sc-eQTL 2.31e-02 0.198 0.0866 0.309 NK_CD56bright L2
ENSG00000162517 PEF1 -948976 sc-eQTL 6.92e-01 0.0338 0.0852 0.309 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -22584 sc-eQTL 6.23e-01 -0.0434 0.0881 0.309 NK_CD56bright L2
ENSG00000287510 AL137857.1 -35773 sc-eQTL 3.49e-01 0.0815 0.0867 0.309 NK_CD56bright L2
ENSG00000060688 SNRNP40 -600868 sc-eQTL 1.13e-01 0.15 0.0944 0.308 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 8.05e-01 0.0174 0.0702 0.308 NK_CD56dim L2
ENSG00000134644 PUM1 -370071 sc-eQTL 4.91e-01 -0.0496 0.072 0.308 NK_CD56dim L2
ENSG00000162511 LAPTM5 -61854 sc-eQTL 6.17e-01 -0.0385 0.0768 0.308 NK_CD56dim L2
ENSG00000162517 PEF1 -948976 sc-eQTL 4.93e-01 0.0469 0.0683 0.308 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -22584 sc-eQTL 9.49e-01 -0.00622 0.0963 0.308 NK_CD56dim L2
ENSG00000287510 AL137857.1 -35773 sc-eQTL 9.85e-01 0.00147 0.0794 0.308 NK_CD56dim L2
ENSG00000060688 SNRNP40 -600868 sc-eQTL 7.25e-01 0.0357 0.101 0.313 NK_HLA L2
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 3.61e-01 0.0827 0.0902 0.313 NK_HLA L2
ENSG00000134644 PUM1 -370071 sc-eQTL 6.10e-02 -0.165 0.0873 0.313 NK_HLA L2
ENSG00000162511 LAPTM5 -61854 sc-eQTL 7.39e-01 -0.0281 0.0841 0.313 NK_HLA L2
ENSG00000162517 PEF1 -948976 sc-eQTL 6.95e-01 0.0372 0.0947 0.313 NK_HLA L2
ENSG00000186056 MATN1-AS1 -22584 sc-eQTL 8.63e-01 0.0154 0.0895 0.313 NK_HLA L2
ENSG00000287510 AL137857.1 -35773 sc-eQTL 6.99e-01 0.0335 0.0865 0.313 NK_HLA L2
ENSG00000060688 SNRNP40 -600868 sc-eQTL 9.03e-02 0.156 0.0916 0.308 NK_cytokine L2
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 1.91e-01 -0.0942 0.0717 0.308 NK_cytokine L2
ENSG00000134644 PUM1 -370071 sc-eQTL 3.35e-01 0.0751 0.0777 0.308 NK_cytokine L2
ENSG00000162511 LAPTM5 -61854 sc-eQTL 8.15e-01 0.0201 0.0857 0.308 NK_cytokine L2
ENSG00000162517 PEF1 -948976 sc-eQTL 6.63e-01 0.0318 0.073 0.308 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -22584 sc-eQTL 7.58e-01 0.028 0.0908 0.308 NK_cytokine L2
ENSG00000287510 AL137857.1 -35773 sc-eQTL 3.03e-01 0.087 0.0843 0.308 NK_cytokine L2
ENSG00000060688 SNRNP40 -600868 sc-eQTL 1.92e-01 0.158 0.121 0.289 PB L2
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 2.43e-01 -0.164 0.14 0.289 PB L2
ENSG00000134644 PUM1 -370071 sc-eQTL 7.42e-01 -0.0403 0.122 0.289 PB L2
ENSG00000162510 MATN1 -27665 sc-eQTL 3.00e-01 -0.118 0.114 0.289 PB L2
ENSG00000162511 LAPTM5 -61854 sc-eQTL 3.72e-01 -0.0728 0.0812 0.289 PB L2
ENSG00000162517 PEF1 -948976 sc-eQTL 5.66e-01 0.0721 0.125 0.289 PB L2
ENSG00000186056 MATN1-AS1 -22584 sc-eQTL 3.54e-01 0.104 0.111 0.289 PB L2
ENSG00000287510 AL137857.1 -35773 sc-eQTL 6.34e-01 -0.0567 0.119 0.289 PB L2
ENSG00000060688 SNRNP40 -600868 sc-eQTL 5.56e-01 0.0434 0.0736 0.311 Pro_T L2
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 2.20e-01 0.115 0.0932 0.311 Pro_T L2
ENSG00000134644 PUM1 -370071 sc-eQTL 3.98e-01 -0.0738 0.0871 0.311 Pro_T L2
ENSG00000162511 LAPTM5 -61854 sc-eQTL 3.69e-01 -0.0562 0.0625 0.311 Pro_T L2
ENSG00000162517 PEF1 -948976 sc-eQTL 7.57e-01 -0.0285 0.0918 0.311 Pro_T L2
ENSG00000186056 MATN1-AS1 -22584 sc-eQTL 7.03e-01 -0.0334 0.0874 0.311 Pro_T L2
ENSG00000287510 AL137857.1 -35773 sc-eQTL 9.48e-01 -0.00528 0.0804 0.311 Pro_T L2
ENSG00000060688 SNRNP40 -600868 sc-eQTL 8.99e-01 0.0122 0.0955 0.31 Treg L2
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 2.70e-01 -0.102 0.0922 0.31 Treg L2
ENSG00000134644 PUM1 -370071 sc-eQTL 3.94e-01 -0.063 0.0738 0.31 Treg L2
ENSG00000162511 LAPTM5 -61854 sc-eQTL 8.54e-01 -0.0156 0.0847 0.31 Treg L2
ENSG00000162517 PEF1 -948976 sc-eQTL 9.57e-01 -0.00493 0.0915 0.31 Treg L2
ENSG00000186056 MATN1-AS1 -22584 sc-eQTL 3.63e-01 0.0786 0.0861 0.31 Treg L2
ENSG00000287510 AL137857.1 -35773 sc-eQTL 6.61e-01 0.0379 0.0861 0.31 Treg L2
ENSG00000060688 SNRNP40 -600868 sc-eQTL 3.71e-01 0.09 0.1 0.315 cDC L2
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 5.78e-01 0.0606 0.109 0.315 cDC L2
ENSG00000134644 PUM1 -370071 sc-eQTL 1.36e-02 -0.229 0.092 0.315 cDC L2
ENSG00000162511 LAPTM5 -61854 sc-eQTL 1.49e-01 0.0945 0.0652 0.315 cDC L2
ENSG00000162517 PEF1 -948976 sc-eQTL 9.19e-01 0.00965 0.0949 0.315 cDC L2
ENSG00000168528 SERINC2 -713645 sc-eQTL 8.56e-01 0.0153 0.0842 0.315 cDC L2
ENSG00000284543 LINC01226 -810306 sc-eQTL 2.39e-01 0.0973 0.0824 0.315 cDC L2
ENSG00000287510 AL137857.1 -35773 sc-eQTL 8.79e-01 0.0136 0.089 0.315 cDC L2
ENSG00000060688 SNRNP40 -600868 sc-eQTL 3.67e-01 0.0696 0.077 0.31 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 9.75e-01 0.00275 0.086 0.31 cMono_IL1B L2
ENSG00000134644 PUM1 -370071 sc-eQTL 3.59e-01 0.0534 0.0581 0.31 cMono_IL1B L2
ENSG00000162511 LAPTM5 -61854 sc-eQTL 8.44e-01 -0.0101 0.0511 0.31 cMono_IL1B L2
ENSG00000162512 SDC3 -212838 sc-eQTL 6.52e-01 0.0435 0.0962 0.31 cMono_IL1B L2
ENSG00000162517 PEF1 -948976 sc-eQTL 7.62e-01 -0.0238 0.0786 0.31 cMono_IL1B L2
ENSG00000168528 SERINC2 -713645 sc-eQTL 8.12e-01 0.0232 0.0974 0.31 cMono_IL1B L2
ENSG00000284543 LINC01226 -810306 sc-eQTL 1.49e-01 -0.124 0.0857 0.31 cMono_IL1B L2
ENSG00000287510 AL137857.1 -35773 sc-eQTL 9.31e-03 -0.207 0.079 0.31 cMono_IL1B L2
ENSG00000060688 SNRNP40 -600868 sc-eQTL 9.66e-01 -0.00346 0.0815 0.31 cMono_S100A L2
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 7.98e-01 -0.0247 0.0963 0.31 cMono_S100A L2
ENSG00000134644 PUM1 -370071 sc-eQTL 7.17e-01 0.0252 0.0696 0.31 cMono_S100A L2
ENSG00000162511 LAPTM5 -61854 sc-eQTL 9.97e-01 0.000211 0.0535 0.31 cMono_S100A L2
ENSG00000162512 SDC3 -212838 sc-eQTL 5.29e-01 0.0582 0.0924 0.31 cMono_S100A L2
ENSG00000162517 PEF1 -948976 sc-eQTL 9.46e-01 0.00561 0.0835 0.31 cMono_S100A L2
ENSG00000168528 SERINC2 -713645 sc-eQTL 5.65e-01 0.0563 0.0978 0.31 cMono_S100A L2
ENSG00000284543 LINC01226 -810306 sc-eQTL 6.36e-01 -0.0376 0.0795 0.31 cMono_S100A L2
ENSG00000287510 AL137857.1 -35773 sc-eQTL 6.71e-01 -0.0339 0.0798 0.31 cMono_S100A L2
ENSG00000060688 SNRNP40 -600868 sc-eQTL 7.84e-01 0.033 0.12 0.321 gdT L2
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 7.11e-01 0.0383 0.103 0.321 gdT L2
ENSG00000134644 PUM1 -370071 sc-eQTL 8.94e-01 0.0142 0.106 0.321 gdT L2
ENSG00000162511 LAPTM5 -61854 sc-eQTL 2.42e-01 -0.135 0.115 0.321 gdT L2
ENSG00000162517 PEF1 -948976 sc-eQTL 3.22e-01 -0.105 0.105 0.321 gdT L2
ENSG00000186056 MATN1-AS1 -22584 sc-eQTL 1.10e-01 0.17 0.106 0.321 gdT L2
ENSG00000287510 AL137857.1 -35773 sc-eQTL 6.09e-01 -0.0529 0.103 0.321 gdT L2
ENSG00000060688 SNRNP40 -600868 sc-eQTL 4.74e-01 0.065 0.0906 0.313 intMono L2
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 9.66e-01 -0.00422 0.0975 0.313 intMono L2
ENSG00000134644 PUM1 -370071 sc-eQTL 3.89e-01 0.0713 0.0826 0.313 intMono L2
ENSG00000162511 LAPTM5 -61854 sc-eQTL 7.14e-01 -0.0238 0.0649 0.313 intMono L2
ENSG00000162512 SDC3 -212838 sc-eQTL 8.28e-01 0.0193 0.0888 0.313 intMono L2
ENSG00000162517 PEF1 -948976 sc-eQTL 1.17e-01 0.146 0.0928 0.313 intMono L2
ENSG00000168528 SERINC2 -713645 sc-eQTL 9.86e-01 -0.00161 0.093 0.313 intMono L2
ENSG00000284543 LINC01226 -810306 sc-eQTL 3.41e-01 -0.084 0.0879 0.313 intMono L2
ENSG00000287510 AL137857.1 -35773 sc-eQTL 3.62e-01 -0.0804 0.088 0.313 intMono L2
ENSG00000060688 SNRNP40 -600868 sc-eQTL 9.92e-02 -0.139 0.0839 0.314 ncMono L2
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 3.18e-01 0.09 0.0899 0.314 ncMono L2
ENSG00000134644 PUM1 -370071 sc-eQTL 2.47e-01 0.0852 0.0734 0.314 ncMono L2
ENSG00000162511 LAPTM5 -61854 sc-eQTL 7.52e-01 0.0211 0.0669 0.314 ncMono L2
ENSG00000162512 SDC3 -212838 sc-eQTL 8.79e-01 -0.0114 0.075 0.314 ncMono L2
ENSG00000162517 PEF1 -948976 sc-eQTL 2.96e-02 0.186 0.0849 0.314 ncMono L2
ENSG00000168528 SERINC2 -713645 sc-eQTL 9.33e-01 0.00684 0.0818 0.314 ncMono L2
ENSG00000284543 LINC01226 -810306 sc-eQTL 4.76e-01 0.0582 0.0816 0.314 ncMono L2
ENSG00000287510 AL137857.1 -35773 sc-eQTL 9.16e-01 -0.00898 0.0848 0.314 ncMono L2
ENSG00000060688 SNRNP40 -600868 sc-eQTL 4.22e-01 0.0773 0.096 0.316 pDC L2
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 5.17e-01 -0.0685 0.105 0.316 pDC L2
ENSG00000134644 PUM1 -370071 sc-eQTL 2.96e-01 0.0915 0.0873 0.316 pDC L2
ENSG00000162511 LAPTM5 -61854 sc-eQTL 6.89e-01 -0.0326 0.0814 0.316 pDC L2
ENSG00000162517 PEF1 -948976 sc-eQTL 7.12e-01 0.039 0.106 0.316 pDC L2
ENSG00000168528 SERINC2 -713645 sc-eQTL 9.14e-01 -0.0107 0.0987 0.316 pDC L2
ENSG00000284543 LINC01226 -810306 sc-eQTL 5.69e-02 -0.145 0.0757 0.316 pDC L2
ENSG00000287510 AL137857.1 -35773 sc-eQTL 7.82e-01 -0.025 0.0901 0.316 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -600868 sc-eQTL 9.94e-01 0.000752 0.0965 0.31 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 2.93e-01 0.0844 0.0801 0.31 B_Memory LOneK1K
ENSG00000134644 PUM1 -370071 sc-eQTL 4.92e-01 -0.0489 0.0711 0.31 B_Memory LOneK1K
ENSG00000162510 MATN1 -27665 sc-eQTL 9.67e-02 -0.135 0.0806 0.31 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -61854 sc-eQTL 8.76e-01 0.00795 0.051 0.31 B_Memory LOneK1K
ENSG00000162517 PEF1 -948976 sc-eQTL 7.84e-01 -0.0231 0.0845 0.31 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -22584 sc-eQTL 9.61e-02 0.112 0.067 0.31 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -35773 sc-eQTL 4.36e-01 0.0573 0.0734 0.31 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -600868 sc-eQTL 1.27e-02 0.218 0.0866 0.31 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 5.52e-01 0.0414 0.0694 0.31 B_Naive LOneK1K
ENSG00000134644 PUM1 -370071 sc-eQTL 4.20e-01 -0.0531 0.0656 0.31 B_Naive LOneK1K
ENSG00000162510 MATN1 -27665 sc-eQTL 7.41e-02 -0.113 0.0628 0.31 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -61854 sc-eQTL 2.49e-01 -0.0514 0.0444 0.31 B_Naive LOneK1K
ENSG00000162517 PEF1 -948976 sc-eQTL 7.98e-01 -0.0208 0.0814 0.31 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -22584 sc-eQTL 6.95e-02 0.104 0.0571 0.31 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -35773 sc-eQTL 2.05e-01 0.0866 0.0681 0.31 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -600868 sc-eQTL 9.71e-01 -0.00268 0.0734 0.31 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 8.33e-01 -0.0176 0.0831 0.31 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -370071 sc-eQTL 4.31e-01 0.0418 0.053 0.31 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -61854 sc-eQTL 9.41e-01 -0.00343 0.0466 0.31 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -212838 sc-eQTL 4.17e-01 0.0772 0.0949 0.31 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -948976 sc-eQTL 3.74e-01 -0.0595 0.0667 0.31 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -713645 sc-eQTL 7.71e-01 0.0285 0.0978 0.31 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -810306 sc-eQTL 3.08e-01 -0.0817 0.08 0.31 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -35773 sc-eQTL 9.31e-02 -0.126 0.0746 0.31 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -600868 sc-eQTL 3.80e-01 -0.0706 0.0804 0.31 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 8.55e-01 -0.0162 0.0881 0.31 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -370071 sc-eQTL 2.54e-01 0.0823 0.072 0.31 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -61854 sc-eQTL 8.49e-01 -0.011 0.0577 0.31 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -212838 sc-eQTL 6.86e-01 -0.0341 0.0843 0.31 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -948976 sc-eQTL 1.72e-02 0.182 0.0756 0.31 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -713645 sc-eQTL 9.12e-01 -0.0097 0.0875 0.31 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -810306 sc-eQTL 5.71e-01 -0.047 0.083 0.31 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -35773 sc-eQTL 4.41e-01 -0.0641 0.083 0.31 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -600868 sc-eQTL 2.81e-02 0.197 0.089 0.308 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -601062 sc-eQTL 8.67e-01 -0.0103 0.0615 0.308 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -370071 sc-eQTL 7.71e-01 -0.0196 0.0674 0.308 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -61854 sc-eQTL 8.14e-01 0.0177 0.0753 0.308 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -948976 sc-eQTL 3.84e-01 0.0498 0.0571 0.308 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -22584 sc-eQTL 6.12e-01 0.0441 0.0868 0.308 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -35773 sc-eQTL 3.86e-01 0.065 0.0749 0.308 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162511 LAPTM5 -61854 eQTL 1.98e-05 -0.043 0.01 0.0 0.0 0.346
ENSG00000162517 PEF1 -948976 eQTL 0.04 0.0309 0.015 0.0 0.0 0.346
ENSG00000168528 SERINC2 -713645 eQTL 0.0475 0.0774 0.039 0.0 0.0 0.346
ENSG00000186056 MATN1-AS1 -22584 eQTL 7.51e-08 0.068 0.0126 0.00477 0.00626 0.346

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162511 LAPTM5 -61854 7.22e-06 7.18e-06 7.17e-07 3.67e-06 1.75e-06 2.58e-06 8.7e-06 1.15e-06 4.65e-06 3.05e-06 8.01e-06 3.03e-06 1.02e-05 2.39e-06 9.99e-07 3.93e-06 2.92e-06 3.79e-06 1.5e-06 1.72e-06 2.74e-06 6.14e-06 5.07e-06 1.91e-06 9.57e-06 2.29e-06 2.95e-06 1.74e-06 6.45e-06 7.11e-06 3.29e-06 4.15e-07 7.26e-07 2.27e-06 2.22e-06 1.38e-06 1.08e-06 5.14e-07 1.35e-06 6.69e-07 6.55e-07 8.36e-06 7.85e-07 1.62e-07 7.17e-07 1.17e-06 1.08e-06 6.86e-07 5.44e-07
ENSG00000186056 MATN1-AS1 -22584 1.53e-05 1.55e-05 3.02e-06 9.71e-06 2.45e-06 7.28e-06 2.06e-05 2.45e-06 1.5e-05 7.3e-06 1.92e-05 7.7e-06 2.66e-05 5.8e-06 4.38e-06 9.06e-06 8.14e-06 1.37e-05 3.84e-06 4.14e-06 7.4e-06 1.42e-05 1.56e-05 4.85e-06 2.57e-05 5.22e-06 7.52e-06 6.08e-06 1.66e-05 1.6e-05 1.04e-05 1.11e-06 1.4e-06 4.1e-06 6.8e-06 3.74e-06 1.77e-06 2.41e-06 2.99e-06 2e-06 1.36e-06 1.92e-05 2.43e-06 2.27e-07 1.48e-06 2.36e-06 2.47e-06 9.75e-07 8.3e-07