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Genes within 1Mb (chr1:30695372:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -601416 sc-eQTL 4.70e-01 0.0588 0.0813 0.509 B L1
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 9.95e-01 -0.000412 0.0652 0.509 B L1
ENSG00000134644 PUM1 -370619 sc-eQTL 7.93e-01 0.0144 0.0547 0.509 B L1
ENSG00000162510 MATN1 -28213 sc-eQTL 2.90e-01 -0.0609 0.0573 0.509 B L1
ENSG00000162511 LAPTM5 -62402 sc-eQTL 9.67e-01 -0.00186 0.045 0.509 B L1
ENSG00000162517 PEF1 -949524 sc-eQTL 8.64e-01 -0.0116 0.0679 0.509 B L1
ENSG00000186056 MATN1-AS1 -23132 sc-eQTL 2.70e-01 0.0582 0.0526 0.509 B L1
ENSG00000287510 AL137857.1 -36321 sc-eQTL 4.83e-02 0.123 0.0619 0.509 B L1
ENSG00000060688 SNRNP40 -601416 sc-eQTL 4.88e-01 -0.0489 0.0704 0.509 CD4T L1
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 1.01e-01 0.0901 0.0547 0.509 CD4T L1
ENSG00000134644 PUM1 -370619 sc-eQTL 2.88e-01 0.0521 0.0489 0.509 CD4T L1
ENSG00000162511 LAPTM5 -62402 sc-eQTL 2.55e-01 0.0618 0.0541 0.509 CD4T L1
ENSG00000162517 PEF1 -949524 sc-eQTL 8.99e-01 -0.00721 0.0568 0.509 CD4T L1
ENSG00000186056 MATN1-AS1 -23132 sc-eQTL 9.79e-01 -0.00126 0.0486 0.509 CD4T L1
ENSG00000287510 AL137857.1 -36321 sc-eQTL 1.49e-01 0.0839 0.0579 0.509 CD4T L1
ENSG00000060688 SNRNP40 -601416 sc-eQTL 2.00e-01 0.122 0.0945 0.509 CD8T L1
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 5.15e-01 -0.0411 0.0631 0.509 CD8T L1
ENSG00000134644 PUM1 -370619 sc-eQTL 4.77e-02 0.11 0.0551 0.509 CD8T L1
ENSG00000162511 LAPTM5 -62402 sc-eQTL 6.41e-01 0.0252 0.054 0.509 CD8T L1
ENSG00000162517 PEF1 -949524 sc-eQTL 1.91e-01 0.087 0.0662 0.509 CD8T L1
ENSG00000186056 MATN1-AS1 -23132 sc-eQTL 7.96e-01 -0.0164 0.0633 0.509 CD8T L1
ENSG00000287510 AL137857.1 -36321 sc-eQTL 1.30e-01 0.12 0.0791 0.509 CD8T L1
ENSG00000060688 SNRNP40 -601416 sc-eQTL 5.97e-01 0.0427 0.0807 0.509 DC L1
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 5.84e-01 0.0523 0.0955 0.509 DC L1
ENSG00000134644 PUM1 -370619 sc-eQTL 2.15e-03 -0.227 0.0731 0.509 DC L1
ENSG00000162511 LAPTM5 -62402 sc-eQTL 6.87e-01 -0.0216 0.0534 0.509 DC L1
ENSG00000162517 PEF1 -949524 sc-eQTL 6.20e-01 0.043 0.0866 0.509 DC L1
ENSG00000168528 SERINC2 -714193 sc-eQTL 6.90e-01 0.0352 0.0881 0.509 DC L1
ENSG00000284543 LINC01226 -810854 sc-eQTL 4.82e-01 -0.0411 0.0583 0.509 DC L1
ENSG00000287510 AL137857.1 -36321 sc-eQTL 9.93e-01 0.000791 0.0845 0.509 DC L1
ENSG00000060688 SNRNP40 -601416 sc-eQTL 6.46e-01 -0.029 0.0631 0.509 Mono L1
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 5.66e-01 0.045 0.0781 0.509 Mono L1
ENSG00000134644 PUM1 -370619 sc-eQTL 4.86e-01 0.0349 0.0501 0.509 Mono L1
ENSG00000162511 LAPTM5 -62402 sc-eQTL 5.31e-01 0.0289 0.0461 0.509 Mono L1
ENSG00000162512 SDC3 -213386 sc-eQTL 8.28e-01 -0.0193 0.0886 0.509 Mono L1
ENSG00000162517 PEF1 -949524 sc-eQTL 2.67e-01 0.069 0.062 0.509 Mono L1
ENSG00000168528 SERINC2 -714193 sc-eQTL 2.79e-01 0.103 0.0948 0.509 Mono L1
ENSG00000284543 LINC01226 -810854 sc-eQTL 3.16e-02 -0.179 0.0828 0.509 Mono L1
ENSG00000287510 AL137857.1 -36321 sc-eQTL 3.05e-01 -0.0751 0.073 0.509 Mono L1
ENSG00000060688 SNRNP40 -601416 sc-eQTL 2.52e-01 0.101 0.0876 0.509 NK L1
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 7.63e-01 0.0182 0.0601 0.509 NK L1
ENSG00000134644 PUM1 -370619 sc-eQTL 7.69e-01 -0.0185 0.0631 0.509 NK L1
ENSG00000162511 LAPTM5 -62402 sc-eQTL 1.15e-02 0.182 0.0715 0.509 NK L1
ENSG00000162517 PEF1 -949524 sc-eQTL 4.37e-01 0.0412 0.0529 0.509 NK L1
ENSG00000186056 MATN1-AS1 -23132 sc-eQTL 1.46e-01 -0.118 0.0812 0.509 NK L1
ENSG00000287510 AL137857.1 -36321 sc-eQTL 3.94e-02 0.155 0.0746 0.509 NK L1
ENSG00000060688 SNRNP40 -601416 sc-eQTL 6.35e-02 0.124 0.0665 0.509 Other_T L1
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 7.33e-01 0.0244 0.0716 0.509 Other_T L1
ENSG00000134644 PUM1 -370619 sc-eQTL 8.76e-01 -0.0101 0.0644 0.509 Other_T L1
ENSG00000162511 LAPTM5 -62402 sc-eQTL 5.51e-01 -0.0315 0.0528 0.509 Other_T L1
ENSG00000162517 PEF1 -949524 sc-eQTL 2.07e-01 -0.0888 0.0702 0.509 Other_T L1
ENSG00000186056 MATN1-AS1 -23132 sc-eQTL 8.54e-01 -0.0159 0.0865 0.509 Other_T L1
ENSG00000287510 AL137857.1 -36321 sc-eQTL 2.94e-01 0.0946 0.0898 0.509 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -601416 sc-eQTL 2.30e-01 -0.133 0.11 0.492 B_Activated L2
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 4.21e-01 -0.09 0.111 0.492 B_Activated L2
ENSG00000134644 PUM1 -370619 sc-eQTL 7.66e-01 -0.0309 0.104 0.492 B_Activated L2
ENSG00000162510 MATN1 -28213 sc-eQTL 7.49e-02 0.161 0.0898 0.492 B_Activated L2
ENSG00000162511 LAPTM5 -62402 sc-eQTL 8.06e-01 0.0156 0.0632 0.492 B_Activated L2
ENSG00000162517 PEF1 -949524 sc-eQTL 3.54e-01 0.0998 0.107 0.492 B_Activated L2
ENSG00000186056 MATN1-AS1 -23132 sc-eQTL 7.43e-01 0.0335 0.102 0.492 B_Activated L2
ENSG00000287510 AL137857.1 -36321 sc-eQTL 7.17e-02 0.162 0.0895 0.492 B_Activated L2
ENSG00000060688 SNRNP40 -601416 sc-eQTL 3.71e-01 -0.0892 0.0995 0.506 B_Intermediate L2
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 2.66e-01 0.0923 0.0828 0.506 B_Intermediate L2
ENSG00000134644 PUM1 -370619 sc-eQTL 7.08e-01 0.0293 0.0783 0.506 B_Intermediate L2
ENSG00000162510 MATN1 -28213 sc-eQTL 1.11e-01 -0.13 0.081 0.506 B_Intermediate L2
ENSG00000162511 LAPTM5 -62402 sc-eQTL 2.44e-01 0.0583 0.0499 0.506 B_Intermediate L2
ENSG00000162517 PEF1 -949524 sc-eQTL 7.24e-01 0.0329 0.0929 0.506 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -23132 sc-eQTL 2.36e-01 0.0831 0.07 0.506 B_Intermediate L2
ENSG00000287510 AL137857.1 -36321 sc-eQTL 6.40e-01 0.0367 0.0785 0.506 B_Intermediate L2
ENSG00000060688 SNRNP40 -601416 sc-eQTL 9.10e-01 0.011 0.0978 0.509 B_Memory L2
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 7.86e-01 0.0245 0.0901 0.509 B_Memory L2
ENSG00000134644 PUM1 -370619 sc-eQTL 7.71e-01 -0.0228 0.0784 0.509 B_Memory L2
ENSG00000162510 MATN1 -28213 sc-eQTL 2.53e-02 -0.167 0.0741 0.509 B_Memory L2
ENSG00000162511 LAPTM5 -62402 sc-eQTL 8.61e-01 0.0117 0.0665 0.509 B_Memory L2
ENSG00000162517 PEF1 -949524 sc-eQTL 2.35e-01 0.105 0.0885 0.509 B_Memory L2
ENSG00000186056 MATN1-AS1 -23132 sc-eQTL 5.12e-01 -0.0499 0.076 0.509 B_Memory L2
ENSG00000287510 AL137857.1 -36321 sc-eQTL 6.98e-01 -0.0347 0.0891 0.509 B_Memory L2
ENSG00000060688 SNRNP40 -601416 sc-eQTL 3.67e-02 0.185 0.0878 0.509 B_Naive1 L2
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 5.25e-01 -0.0487 0.0765 0.509 B_Naive1 L2
ENSG00000134644 PUM1 -370619 sc-eQTL 9.27e-02 0.113 0.0671 0.509 B_Naive1 L2
ENSG00000162510 MATN1 -28213 sc-eQTL 5.32e-01 -0.0429 0.0685 0.509 B_Naive1 L2
ENSG00000162511 LAPTM5 -62402 sc-eQTL 8.96e-01 -0.00598 0.0458 0.509 B_Naive1 L2
ENSG00000162517 PEF1 -949524 sc-eQTL 5.61e-01 0.047 0.0806 0.509 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -23132 sc-eQTL 4.74e-01 0.043 0.0601 0.509 B_Naive1 L2
ENSG00000287510 AL137857.1 -36321 sc-eQTL 5.63e-02 0.141 0.0736 0.509 B_Naive1 L2
ENSG00000060688 SNRNP40 -601416 sc-eQTL 7.23e-01 0.0335 0.0944 0.509 B_Naive2 L2
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 8.11e-01 0.0187 0.078 0.509 B_Naive2 L2
ENSG00000134644 PUM1 -370619 sc-eQTL 1.89e-01 -0.1 0.076 0.509 B_Naive2 L2
ENSG00000162510 MATN1 -28213 sc-eQTL 2.14e-01 -0.091 0.073 0.509 B_Naive2 L2
ENSG00000162511 LAPTM5 -62402 sc-eQTL 7.28e-01 0.0173 0.0497 0.509 B_Naive2 L2
ENSG00000162517 PEF1 -949524 sc-eQTL 6.38e-01 0.0427 0.0905 0.509 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -23132 sc-eQTL 4.92e-01 0.0498 0.0724 0.509 B_Naive2 L2
ENSG00000287510 AL137857.1 -36321 sc-eQTL 2.63e-01 0.0875 0.078 0.509 B_Naive2 L2
ENSG00000060688 SNRNP40 -601416 sc-eQTL 7.71e-01 -0.0284 0.0975 0.509 CD4_CTL L2
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 1.15e-01 -0.151 0.0953 0.509 CD4_CTL L2
ENSG00000134644 PUM1 -370619 sc-eQTL 1.63e-01 0.131 0.0936 0.509 CD4_CTL L2
ENSG00000162511 LAPTM5 -62402 sc-eQTL 3.22e-01 0.0831 0.0837 0.509 CD4_CTL L2
ENSG00000162517 PEF1 -949524 sc-eQTL 8.41e-01 -0.0173 0.086 0.509 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -23132 sc-eQTL 6.85e-01 -0.0373 0.0917 0.509 CD4_CTL L2
ENSG00000287510 AL137857.1 -36321 sc-eQTL 5.99e-01 0.0426 0.0809 0.509 CD4_CTL L2
ENSG00000060688 SNRNP40 -601416 sc-eQTL 7.09e-01 -0.0275 0.0737 0.509 CD4_Naive L2
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 7.65e-02 0.115 0.0649 0.509 CD4_Naive L2
ENSG00000134644 PUM1 -370619 sc-eQTL 1.92e-01 0.068 0.052 0.509 CD4_Naive L2
ENSG00000162511 LAPTM5 -62402 sc-eQTL 1.60e-01 0.0784 0.0556 0.509 CD4_Naive L2
ENSG00000162517 PEF1 -949524 sc-eQTL 8.52e-01 0.0115 0.0613 0.509 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -23132 sc-eQTL 6.94e-01 0.0223 0.0567 0.509 CD4_Naive L2
ENSG00000287510 AL137857.1 -36321 sc-eQTL 6.01e-01 0.0341 0.0651 0.509 CD4_Naive L2
ENSG00000060688 SNRNP40 -601416 sc-eQTL 6.48e-01 -0.0421 0.0921 0.509 CD4_TCM L2
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 9.92e-01 0.000753 0.0743 0.509 CD4_TCM L2
ENSG00000134644 PUM1 -370619 sc-eQTL 7.47e-01 0.0212 0.0657 0.509 CD4_TCM L2
ENSG00000162511 LAPTM5 -62402 sc-eQTL 1.26e-01 0.0832 0.0542 0.509 CD4_TCM L2
ENSG00000162517 PEF1 -949524 sc-eQTL 8.67e-01 0.0122 0.0731 0.509 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -23132 sc-eQTL 5.82e-01 -0.0382 0.0692 0.509 CD4_TCM L2
ENSG00000287510 AL137857.1 -36321 sc-eQTL 6.37e-01 0.0364 0.0771 0.509 CD4_TCM L2
ENSG00000060688 SNRNP40 -601416 sc-eQTL 8.91e-01 0.0124 0.0902 0.509 CD4_TEM L2
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 8.18e-01 -0.0198 0.086 0.509 CD4_TEM L2
ENSG00000134644 PUM1 -370619 sc-eQTL 1.97e-01 0.0923 0.0713 0.509 CD4_TEM L2
ENSG00000162511 LAPTM5 -62402 sc-eQTL 4.73e-03 0.203 0.0711 0.509 CD4_TEM L2
ENSG00000162517 PEF1 -949524 sc-eQTL 5.54e-01 0.0481 0.0811 0.509 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -23132 sc-eQTL 8.87e-01 0.012 0.0847 0.509 CD4_TEM L2
ENSG00000287510 AL137857.1 -36321 sc-eQTL 5.95e-01 -0.0445 0.0834 0.509 CD4_TEM L2
ENSG00000060688 SNRNP40 -601416 sc-eQTL 9.15e-01 0.0108 0.1 0.509 CD8_CTL L2
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 3.03e-01 0.0793 0.0768 0.509 CD8_CTL L2
ENSG00000134644 PUM1 -370619 sc-eQTL 6.21e-01 -0.037 0.0747 0.509 CD8_CTL L2
ENSG00000162511 LAPTM5 -62402 sc-eQTL 7.22e-02 0.149 0.0822 0.509 CD8_CTL L2
ENSG00000162517 PEF1 -949524 sc-eQTL 4.07e-02 0.147 0.0714 0.509 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -23132 sc-eQTL 6.72e-01 0.0369 0.087 0.509 CD8_CTL L2
ENSG00000287510 AL137857.1 -36321 sc-eQTL 6.36e-01 0.0388 0.0819 0.509 CD8_CTL L2
ENSG00000060688 SNRNP40 -601416 sc-eQTL 8.01e-01 -0.0231 0.0913 0.509 CD8_Naive L2
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 6.96e-02 -0.143 0.0781 0.509 CD8_Naive L2
ENSG00000134644 PUM1 -370619 sc-eQTL 1.92e-02 0.148 0.0626 0.509 CD8_Naive L2
ENSG00000162511 LAPTM5 -62402 sc-eQTL 6.77e-01 0.0253 0.0607 0.509 CD8_Naive L2
ENSG00000162517 PEF1 -949524 sc-eQTL 7.84e-01 -0.0232 0.0844 0.509 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -23132 sc-eQTL 6.18e-01 0.0378 0.0758 0.509 CD8_Naive L2
ENSG00000287510 AL137857.1 -36321 sc-eQTL 7.63e-01 -0.0249 0.0825 0.509 CD8_Naive L2
ENSG00000060688 SNRNP40 -601416 sc-eQTL 7.96e-01 -0.0268 0.103 0.514 CD8_TCM L2
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 6.96e-01 -0.037 0.0946 0.514 CD8_TCM L2
ENSG00000134644 PUM1 -370619 sc-eQTL 5.27e-01 0.0563 0.0888 0.514 CD8_TCM L2
ENSG00000162511 LAPTM5 -62402 sc-eQTL 6.15e-01 0.0469 0.093 0.514 CD8_TCM L2
ENSG00000162517 PEF1 -949524 sc-eQTL 4.63e-01 0.0699 0.095 0.514 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -23132 sc-eQTL 4.28e-01 -0.0684 0.086 0.514 CD8_TCM L2
ENSG00000287510 AL137857.1 -36321 sc-eQTL 2.08e-01 -0.11 0.0867 0.514 CD8_TCM L2
ENSG00000060688 SNRNP40 -601416 sc-eQTL 4.86e-02 0.192 0.097 0.509 CD8_TEM L2
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 8.98e-01 0.012 0.0939 0.509 CD8_TEM L2
ENSG00000134644 PUM1 -370619 sc-eQTL 9.89e-01 -0.00133 0.096 0.509 CD8_TEM L2
ENSG00000162511 LAPTM5 -62402 sc-eQTL 4.28e-01 0.0716 0.0901 0.509 CD8_TEM L2
ENSG00000162517 PEF1 -949524 sc-eQTL 7.41e-01 0.0282 0.085 0.509 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -23132 sc-eQTL 1.38e-01 0.139 0.0932 0.509 CD8_TEM L2
ENSG00000287510 AL137857.1 -36321 sc-eQTL 5.16e-01 0.0551 0.0847 0.509 CD8_TEM L2
ENSG00000060688 SNRNP40 -601416 sc-eQTL 2.48e-01 0.114 0.0987 0.509 MAIT L2
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 5.98e-01 -0.0463 0.0877 0.509 MAIT L2
ENSG00000134644 PUM1 -370619 sc-eQTL 5.92e-01 0.0452 0.084 0.509 MAIT L2
ENSG00000162511 LAPTM5 -62402 sc-eQTL 2.15e-01 0.0983 0.079 0.509 MAIT L2
ENSG00000162517 PEF1 -949524 sc-eQTL 5.10e-01 -0.0575 0.0871 0.509 MAIT L2
ENSG00000186056 MATN1-AS1 -23132 sc-eQTL 2.70e-01 -0.0974 0.0881 0.509 MAIT L2
ENSG00000287510 AL137857.1 -36321 sc-eQTL 4.30e-01 0.0718 0.0909 0.509 MAIT L2
ENSG00000060688 SNRNP40 -601416 sc-eQTL 7.73e-01 -0.0288 0.0998 0.509 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 2.45e-01 0.098 0.084 0.509 NK_CD56bright L2
ENSG00000134644 PUM1 -370619 sc-eQTL 2.26e-01 -0.107 0.0882 0.509 NK_CD56bright L2
ENSG00000162511 LAPTM5 -62402 sc-eQTL 5.94e-03 0.238 0.0857 0.509 NK_CD56bright L2
ENSG00000162517 PEF1 -949524 sc-eQTL 9.06e-01 0.01 0.0849 0.509 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -23132 sc-eQTL 2.60e-01 0.0988 0.0875 0.509 NK_CD56bright L2
ENSG00000287510 AL137857.1 -36321 sc-eQTL 5.40e-01 0.0531 0.0864 0.509 NK_CD56bright L2
ENSG00000060688 SNRNP40 -601416 sc-eQTL 5.07e-01 0.0618 0.093 0.506 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 1.35e-01 0.103 0.0685 0.506 NK_CD56dim L2
ENSG00000134644 PUM1 -370619 sc-eQTL 9.45e-01 -0.00486 0.0707 0.506 NK_CD56dim L2
ENSG00000162511 LAPTM5 -62402 sc-eQTL 1.21e-01 0.117 0.0749 0.506 NK_CD56dim L2
ENSG00000162517 PEF1 -949524 sc-eQTL 2.79e-01 0.0725 0.0669 0.506 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -23132 sc-eQTL 4.96e-02 -0.185 0.0935 0.506 NK_CD56dim L2
ENSG00000287510 AL137857.1 -36321 sc-eQTL 3.29e-01 0.0759 0.0777 0.506 NK_CD56dim L2
ENSG00000060688 SNRNP40 -601416 sc-eQTL 9.34e-01 0.00831 0.1 0.509 NK_HLA L2
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 7.11e-01 -0.0332 0.0897 0.509 NK_HLA L2
ENSG00000134644 PUM1 -370619 sc-eQTL 3.32e-03 -0.254 0.0855 0.509 NK_HLA L2
ENSG00000162511 LAPTM5 -62402 sc-eQTL 2.52e-01 0.0955 0.0832 0.509 NK_HLA L2
ENSG00000162517 PEF1 -949524 sc-eQTL 3.37e-01 -0.0904 0.0938 0.509 NK_HLA L2
ENSG00000186056 MATN1-AS1 -23132 sc-eQTL 8.13e-01 -0.021 0.0888 0.509 NK_HLA L2
ENSG00000287510 AL137857.1 -36321 sc-eQTL 6.26e-02 0.159 0.0851 0.509 NK_HLA L2
ENSG00000060688 SNRNP40 -601416 sc-eQTL 7.21e-02 0.164 0.0906 0.506 NK_cytokine L2
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 6.05e-01 -0.0369 0.0712 0.506 NK_cytokine L2
ENSG00000134644 PUM1 -370619 sc-eQTL 1.78e-01 0.104 0.0767 0.506 NK_cytokine L2
ENSG00000162511 LAPTM5 -62402 sc-eQTL 6.33e-02 0.157 0.0841 0.506 NK_cytokine L2
ENSG00000162517 PEF1 -949524 sc-eQTL 9.36e-01 0.00585 0.0723 0.506 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -23132 sc-eQTL 7.63e-01 -0.0272 0.0899 0.506 NK_cytokine L2
ENSG00000287510 AL137857.1 -36321 sc-eQTL 2.55e-01 0.0952 0.0834 0.506 NK_cytokine L2
ENSG00000060688 SNRNP40 -601416 sc-eQTL 8.42e-01 0.0208 0.104 0.489 PB L2
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 5.26e-01 -0.0765 0.12 0.489 PB L2
ENSG00000134644 PUM1 -370619 sc-eQTL 3.55e-01 0.0969 0.104 0.489 PB L2
ENSG00000162510 MATN1 -28213 sc-eQTL 2.57e-01 -0.111 0.0971 0.489 PB L2
ENSG00000162511 LAPTM5 -62402 sc-eQTL 3.32e-01 -0.0676 0.0695 0.489 PB L2
ENSG00000162517 PEF1 -949524 sc-eQTL 1.57e-01 0.152 0.106 0.489 PB L2
ENSG00000186056 MATN1-AS1 -23132 sc-eQTL 8.04e-01 0.0238 0.0954 0.489 PB L2
ENSG00000287510 AL137857.1 -36321 sc-eQTL 9.31e-01 -0.00886 0.102 0.489 PB L2
ENSG00000060688 SNRNP40 -601416 sc-eQTL 2.36e-01 0.0875 0.0736 0.509 Pro_T L2
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 4.61e-01 0.0692 0.0937 0.509 Pro_T L2
ENSG00000134644 PUM1 -370619 sc-eQTL 1.75e-01 0.119 0.0871 0.509 Pro_T L2
ENSG00000162511 LAPTM5 -62402 sc-eQTL 8.97e-01 0.00811 0.0628 0.509 Pro_T L2
ENSG00000162517 PEF1 -949524 sc-eQTL 3.52e-01 -0.0857 0.0919 0.509 Pro_T L2
ENSG00000186056 MATN1-AS1 -23132 sc-eQTL 8.00e-01 -0.0222 0.0877 0.509 Pro_T L2
ENSG00000287510 AL137857.1 -36321 sc-eQTL 3.03e-01 0.083 0.0805 0.509 Pro_T L2
ENSG00000060688 SNRNP40 -601416 sc-eQTL 2.56e-01 0.105 0.0924 0.509 Treg L2
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 6.08e-01 0.046 0.0896 0.509 Treg L2
ENSG00000134644 PUM1 -370619 sc-eQTL 3.18e-01 -0.0717 0.0716 0.509 Treg L2
ENSG00000162511 LAPTM5 -62402 sc-eQTL 4.25e-01 0.0656 0.0821 0.509 Treg L2
ENSG00000162517 PEF1 -949524 sc-eQTL 3.10e-02 -0.191 0.0878 0.509 Treg L2
ENSG00000186056 MATN1-AS1 -23132 sc-eQTL 6.17e-01 -0.0419 0.0837 0.509 Treg L2
ENSG00000287510 AL137857.1 -36321 sc-eQTL 4.65e-01 0.0611 0.0835 0.509 Treg L2
ENSG00000060688 SNRNP40 -601416 sc-eQTL 3.19e-01 0.0967 0.0967 0.507 cDC L2
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 6.92e-01 -0.0417 0.105 0.507 cDC L2
ENSG00000134644 PUM1 -370619 sc-eQTL 4.27e-03 -0.255 0.0881 0.507 cDC L2
ENSG00000162511 LAPTM5 -62402 sc-eQTL 7.76e-02 0.111 0.0626 0.507 cDC L2
ENSG00000162517 PEF1 -949524 sc-eQTL 8.94e-01 0.0122 0.0915 0.507 cDC L2
ENSG00000168528 SERINC2 -714193 sc-eQTL 4.98e-01 0.055 0.081 0.507 cDC L2
ENSG00000284543 LINC01226 -810854 sc-eQTL 8.11e-01 0.0191 0.0797 0.507 cDC L2
ENSG00000287510 AL137857.1 -36321 sc-eQTL 3.62e-01 0.0782 0.0856 0.507 cDC L2
ENSG00000060688 SNRNP40 -601416 sc-eQTL 9.20e-01 -0.0076 0.0757 0.509 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 4.07e-01 0.0701 0.0843 0.509 cMono_IL1B L2
ENSG00000134644 PUM1 -370619 sc-eQTL 8.17e-01 -0.0133 0.0572 0.509 cMono_IL1B L2
ENSG00000162511 LAPTM5 -62402 sc-eQTL 5.19e-01 0.0324 0.0501 0.509 cMono_IL1B L2
ENSG00000162512 SDC3 -213386 sc-eQTL 2.30e-01 0.113 0.0942 0.509 cMono_IL1B L2
ENSG00000162517 PEF1 -949524 sc-eQTL 9.01e-01 -0.00962 0.0772 0.509 cMono_IL1B L2
ENSG00000168528 SERINC2 -714193 sc-eQTL 3.78e-01 0.0844 0.0955 0.509 cMono_IL1B L2
ENSG00000284543 LINC01226 -810854 sc-eQTL 6.95e-03 -0.227 0.0831 0.509 cMono_IL1B L2
ENSG00000287510 AL137857.1 -36321 sc-eQTL 3.38e-01 -0.0755 0.0787 0.509 cMono_IL1B L2
ENSG00000060688 SNRNP40 -601416 sc-eQTL 9.12e-01 -0.00873 0.0793 0.509 cMono_S100A L2
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 3.42e-01 -0.089 0.0935 0.509 cMono_S100A L2
ENSG00000134644 PUM1 -370619 sc-eQTL 2.51e-01 0.0777 0.0675 0.509 cMono_S100A L2
ENSG00000162511 LAPTM5 -62402 sc-eQTL 7.62e-01 -0.0158 0.052 0.509 cMono_S100A L2
ENSG00000162512 SDC3 -213386 sc-eQTL 7.32e-01 -0.0308 0.0899 0.509 cMono_S100A L2
ENSG00000162517 PEF1 -949524 sc-eQTL 5.97e-01 0.0429 0.0811 0.509 cMono_S100A L2
ENSG00000168528 SERINC2 -714193 sc-eQTL 4.73e-01 0.0683 0.0951 0.509 cMono_S100A L2
ENSG00000284543 LINC01226 -810854 sc-eQTL 1.61e-01 -0.108 0.077 0.509 cMono_S100A L2
ENSG00000287510 AL137857.1 -36321 sc-eQTL 6.82e-01 -0.0319 0.0776 0.509 cMono_S100A L2
ENSG00000060688 SNRNP40 -601416 sc-eQTL 9.39e-01 0.0095 0.124 0.515 gdT L2
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 5.64e-01 0.0617 0.107 0.515 gdT L2
ENSG00000134644 PUM1 -370619 sc-eQTL 9.09e-01 -0.0126 0.11 0.515 gdT L2
ENSG00000162511 LAPTM5 -62402 sc-eQTL 7.28e-01 -0.0417 0.12 0.515 gdT L2
ENSG00000162517 PEF1 -949524 sc-eQTL 6.77e-01 -0.0456 0.109 0.515 gdT L2
ENSG00000186056 MATN1-AS1 -23132 sc-eQTL 7.01e-01 0.0426 0.11 0.515 gdT L2
ENSG00000287510 AL137857.1 -36321 sc-eQTL 5.24e-01 -0.0682 0.107 0.515 gdT L2
ENSG00000060688 SNRNP40 -601416 sc-eQTL 7.60e-01 0.027 0.0882 0.507 intMono L2
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 2.52e-01 0.109 0.0945 0.507 intMono L2
ENSG00000134644 PUM1 -370619 sc-eQTL 7.70e-01 -0.0235 0.0804 0.507 intMono L2
ENSG00000162511 LAPTM5 -62402 sc-eQTL 3.29e-01 0.0616 0.0629 0.507 intMono L2
ENSG00000162512 SDC3 -213386 sc-eQTL 5.18e-01 -0.0559 0.0863 0.507 intMono L2
ENSG00000162517 PEF1 -949524 sc-eQTL 1.86e-02 0.212 0.0895 0.507 intMono L2
ENSG00000168528 SERINC2 -714193 sc-eQTL 4.35e-02 0.182 0.0895 0.507 intMono L2
ENSG00000284543 LINC01226 -810854 sc-eQTL 8.39e-01 0.0174 0.0857 0.507 intMono L2
ENSG00000287510 AL137857.1 -36321 sc-eQTL 1.45e-01 -0.125 0.0853 0.507 intMono L2
ENSG00000060688 SNRNP40 -601416 sc-eQTL 1.96e-01 -0.107 0.0822 0.505 ncMono L2
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 9.60e-02 0.146 0.0874 0.505 ncMono L2
ENSG00000134644 PUM1 -370619 sc-eQTL 2.75e-01 0.0785 0.0717 0.505 ncMono L2
ENSG00000162511 LAPTM5 -62402 sc-eQTL 6.75e-01 -0.0274 0.0653 0.505 ncMono L2
ENSG00000162512 SDC3 -213386 sc-eQTL 6.45e-01 0.0338 0.0732 0.505 ncMono L2
ENSG00000162517 PEF1 -949524 sc-eQTL 1.27e-01 0.128 0.0835 0.505 ncMono L2
ENSG00000168528 SERINC2 -714193 sc-eQTL 3.46e-01 0.0753 0.0797 0.505 ncMono L2
ENSG00000284543 LINC01226 -810854 sc-eQTL 7.68e-01 0.0236 0.0798 0.505 ncMono L2
ENSG00000287510 AL137857.1 -36321 sc-eQTL 8.68e-01 0.0137 0.0828 0.505 ncMono L2
ENSG00000060688 SNRNP40 -601416 sc-eQTL 7.85e-01 0.0267 0.0976 0.506 pDC L2
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 3.27e-01 0.105 0.107 0.506 pDC L2
ENSG00000134644 PUM1 -370619 sc-eQTL 4.44e-01 -0.068 0.0886 0.506 pDC L2
ENSG00000162511 LAPTM5 -62402 sc-eQTL 1.53e-01 -0.118 0.082 0.506 pDC L2
ENSG00000162517 PEF1 -949524 sc-eQTL 3.63e-01 0.0974 0.107 0.506 pDC L2
ENSG00000168528 SERINC2 -714193 sc-eQTL 6.03e-01 -0.0521 0.1 0.506 pDC L2
ENSG00000284543 LINC01226 -810854 sc-eQTL 8.28e-02 -0.134 0.077 0.506 pDC L2
ENSG00000287510 AL137857.1 -36321 sc-eQTL 8.18e-01 -0.021 0.0914 0.506 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -601416 sc-eQTL 2.50e-01 -0.11 0.0949 0.509 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 1.38e-01 0.117 0.0789 0.509 B_Memory LOneK1K
ENSG00000134644 PUM1 -370619 sc-eQTL 4.59e-01 -0.052 0.0702 0.509 B_Memory LOneK1K
ENSG00000162510 MATN1 -28213 sc-eQTL 1.86e-01 -0.106 0.0798 0.509 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -62402 sc-eQTL 9.25e-01 0.00471 0.0503 0.509 B_Memory LOneK1K
ENSG00000162517 PEF1 -949524 sc-eQTL 4.47e-01 0.0634 0.0832 0.509 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -23132 sc-eQTL 5.83e-01 0.0366 0.0665 0.509 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -36321 sc-eQTL 6.50e-01 0.0329 0.0725 0.509 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -601416 sc-eQTL 1.23e-01 0.132 0.0855 0.509 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 6.83e-01 -0.0278 0.068 0.509 B_Naive LOneK1K
ENSG00000134644 PUM1 -370619 sc-eQTL 8.55e-01 -0.0118 0.0643 0.509 B_Naive LOneK1K
ENSG00000162510 MATN1 -28213 sc-eQTL 4.58e-01 -0.046 0.0619 0.509 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -62402 sc-eQTL 8.25e-01 -0.00964 0.0436 0.509 B_Naive LOneK1K
ENSG00000162517 PEF1 -949524 sc-eQTL 5.14e-01 0.052 0.0795 0.509 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -23132 sc-eQTL 3.69e-01 0.0506 0.0562 0.509 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -36321 sc-eQTL 4.87e-02 0.131 0.0663 0.509 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -601416 sc-eQTL 8.01e-01 -0.0182 0.0719 0.509 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 9.38e-01 0.00632 0.0814 0.509 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -370619 sc-eQTL 5.84e-01 0.0284 0.0519 0.509 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -62402 sc-eQTL 5.71e-01 0.0259 0.0456 0.509 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -213386 sc-eQTL 4.04e-01 0.0777 0.093 0.509 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -949524 sc-eQTL 8.81e-01 -0.00978 0.0655 0.509 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -714193 sc-eQTL 3.72e-01 0.0856 0.0956 0.509 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -810854 sc-eQTL 6.39e-03 -0.213 0.0772 0.509 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -36321 sc-eQTL 4.30e-01 -0.0581 0.0734 0.509 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -601416 sc-eQTL 4.65e-01 -0.0575 0.0785 0.509 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 1.17e-01 0.135 0.0856 0.509 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -370619 sc-eQTL 7.99e-01 0.018 0.0705 0.509 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -62402 sc-eQTL 6.94e-01 0.0222 0.0564 0.509 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -213386 sc-eQTL 3.58e-01 -0.0757 0.0822 0.509 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -949524 sc-eQTL 1.81e-02 0.176 0.0739 0.509 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -714193 sc-eQTL 1.11e-01 0.136 0.0849 0.509 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -810854 sc-eQTL 9.21e-01 -0.00801 0.0811 0.509 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -36321 sc-eQTL 3.32e-01 -0.0788 0.081 0.509 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -601416 sc-eQTL 1.88e-01 0.116 0.0881 0.506 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -601610 sc-eQTL 8.07e-01 0.0148 0.0605 0.506 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -370619 sc-eQTL 7.26e-01 0.0232 0.0662 0.506 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -62402 sc-eQTL 4.08e-02 0.151 0.0733 0.506 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -949524 sc-eQTL 5.38e-01 0.0347 0.0562 0.506 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -23132 sc-eQTL 8.48e-02 -0.147 0.0848 0.506 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -36321 sc-eQTL 1.47e-02 0.179 0.0727 0.506 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162510 MATN1 -28213 eQTL 0.000558 -0.0656 0.0189 0.00673 0.00565 0.488
ENSG00000162511 LAPTM5 -62402 eQTL 0.0292 0.0211 0.00967 0.0 0.0 0.488
ENSG00000162517 PEF1 -949524 eQTL 0.0136 0.0356 0.0144 0.0 0.0 0.488
ENSG00000186056 MATN1-AS1 -23132 eQTL 6.49e-03 0.0332 0.0122 0.0 0.0 0.488

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000060688 \N -601416 2.91e-07 1.01e-07 3.71e-08 1.82e-07 9.02e-08 9.8e-08 1.42e-07 5.35e-08 1.41e-07 4.4e-08 1.6e-07 7.75e-08 1.41e-07 6.21e-08 5.84e-08 7.26e-08 4.94e-08 1.14e-07 5.21e-08 4.07e-08 1.04e-07 1.27e-07 1.26e-07 4.13e-08 1.32e-07 1.19e-07 1.11e-07 8.71e-08 1.05e-07 1.11e-07 9.73e-08 3.89e-08 3.28e-08 8.82e-08 8.98e-08 4.02e-08 4.89e-08 9.6e-08 7.58e-08 3.55e-08 5.3e-08 1.31e-07 4.33e-08 2.32e-08 5.43e-08 1.66e-08 1.24e-07 3.95e-09 4.73e-08
ENSG00000162510 MATN1 -28213 1.41e-05 1.18e-05 1.3e-06 6.53e-06 2.4e-06 5.16e-06 1.17e-05 1.8e-06 9.51e-06 5.11e-06 1.38e-05 5.56e-06 1.76e-05 3.63e-06 2.82e-06 6.57e-06 5.45e-06 8.54e-06 2.64e-06 2.76e-06 5.71e-06 1.04e-05 9.43e-06 3.24e-06 1.83e-05 3.72e-06 5.04e-06 3.43e-06 1.13e-05 1.05e-05 6.24e-06 7.89e-07 1.19e-06 3.14e-06 4.54e-06 2.38e-06 1.72e-06 1.91e-06 1.99e-06 1.02e-06 8.99e-07 1.48e-05 1.61e-06 1.53e-07 7.38e-07 1.67e-06 1.8e-06 7.19e-07 4.78e-07