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Genes within 1Mb (chr1:30691777:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -605011 sc-eQTL 2.00e-01 0.0977 0.076 0.553 B L1
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 2.11e-01 -0.0765 0.0609 0.553 B L1
ENSG00000134644 PUM1 -374214 sc-eQTL 5.80e-01 -0.0284 0.0512 0.553 B L1
ENSG00000162510 MATN1 -31808 sc-eQTL 2.27e-01 -0.0651 0.0537 0.553 B L1
ENSG00000162511 LAPTM5 -65997 sc-eQTL 1.46e-01 0.0613 0.042 0.553 B L1
ENSG00000162517 PEF1 -953119 sc-eQTL 2.10e-01 0.0799 0.0635 0.553 B L1
ENSG00000186056 MATN1-AS1 -26727 sc-eQTL 4.85e-01 0.0346 0.0494 0.553 B L1
ENSG00000287510 AL137857.1 -39916 sc-eQTL 1.41e-01 0.0862 0.0583 0.553 B L1
ENSG00000060688 SNRNP40 -605011 sc-eQTL 1.32e-01 0.099 0.0655 0.553 CD4T L1
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 7.88e-01 0.0138 0.0515 0.553 CD4T L1
ENSG00000134644 PUM1 -374214 sc-eQTL 3.73e-01 -0.0408 0.0457 0.553 CD4T L1
ENSG00000162511 LAPTM5 -65997 sc-eQTL 1.32e-01 0.0764 0.0505 0.553 CD4T L1
ENSG00000162517 PEF1 -953119 sc-eQTL 4.86e-01 -0.037 0.053 0.553 CD4T L1
ENSG00000186056 MATN1-AS1 -26727 sc-eQTL 1.33e-01 0.0682 0.0452 0.553 CD4T L1
ENSG00000287510 AL137857.1 -39916 sc-eQTL 9.99e-01 -9.37e-05 0.0544 0.553 CD4T L1
ENSG00000060688 SNRNP40 -605011 sc-eQTL 7.13e-02 0.159 0.0877 0.553 CD8T L1
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 2.92e-01 -0.0619 0.0587 0.553 CD8T L1
ENSG00000134644 PUM1 -374214 sc-eQTL 8.41e-01 0.0104 0.0518 0.553 CD8T L1
ENSG00000162511 LAPTM5 -65997 sc-eQTL 8.73e-01 -0.00804 0.0503 0.553 CD8T L1
ENSG00000162517 PEF1 -953119 sc-eQTL 9.51e-01 -0.00384 0.062 0.553 CD8T L1
ENSG00000186056 MATN1-AS1 -26727 sc-eQTL 3.78e-01 0.0519 0.0589 0.553 CD8T L1
ENSG00000287510 AL137857.1 -39916 sc-eQTL 7.12e-01 -0.0274 0.0741 0.553 CD8T L1
ENSG00000060688 SNRNP40 -605011 sc-eQTL 4.12e-01 -0.0652 0.0792 0.561 DC L1
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 2.46e-01 -0.109 0.0937 0.561 DC L1
ENSG00000134644 PUM1 -374214 sc-eQTL 1.36e-01 -0.109 0.0732 0.561 DC L1
ENSG00000162511 LAPTM5 -65997 sc-eQTL 2.57e-01 0.0596 0.0524 0.561 DC L1
ENSG00000162517 PEF1 -953119 sc-eQTL 9.22e-01 -0.00835 0.0852 0.561 DC L1
ENSG00000168528 SERINC2 -717788 sc-eQTL 2.20e-01 0.106 0.0864 0.561 DC L1
ENSG00000284543 LINC01226 -814449 sc-eQTL 6.16e-01 0.0288 0.0574 0.561 DC L1
ENSG00000287510 AL137857.1 -39916 sc-eQTL 6.47e-01 -0.0381 0.0831 0.561 DC L1
ENSG00000060688 SNRNP40 -605011 sc-eQTL 9.14e-01 -0.0066 0.0609 0.553 Mono L1
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 8.35e-01 0.0157 0.0754 0.553 Mono L1
ENSG00000134644 PUM1 -374214 sc-eQTL 4.30e-02 0.0975 0.0479 0.553 Mono L1
ENSG00000162511 LAPTM5 -65997 sc-eQTL 7.22e-01 0.0158 0.0445 0.553 Mono L1
ENSG00000162512 SDC3 -216981 sc-eQTL 5.85e-01 -0.0467 0.0854 0.553 Mono L1
ENSG00000162517 PEF1 -953119 sc-eQTL 5.22e-01 0.0385 0.0599 0.553 Mono L1
ENSG00000168528 SERINC2 -717788 sc-eQTL 3.23e-01 -0.0906 0.0915 0.553 Mono L1
ENSG00000284543 LINC01226 -814449 sc-eQTL 9.52e-01 -0.00485 0.0808 0.553 Mono L1
ENSG00000287510 AL137857.1 -39916 sc-eQTL 7.49e-01 -0.0226 0.0706 0.553 Mono L1
ENSG00000060688 SNRNP40 -605011 sc-eQTL 1.42e-02 0.202 0.0817 0.552 NK L1
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 1.11e-01 -0.0901 0.0564 0.552 NK L1
ENSG00000134644 PUM1 -374214 sc-eQTL 7.51e-01 0.0189 0.0595 0.552 NK L1
ENSG00000162511 LAPTM5 -65997 sc-eQTL 8.60e-01 -0.0121 0.0684 0.552 NK L1
ENSG00000162517 PEF1 -953119 sc-eQTL 3.42e-01 0.0475 0.0499 0.552 NK L1
ENSG00000186056 MATN1-AS1 -26727 sc-eQTL 4.97e-01 0.0523 0.0768 0.552 NK L1
ENSG00000287510 AL137857.1 -39916 sc-eQTL 7.84e-01 -0.0195 0.071 0.552 NK L1
ENSG00000060688 SNRNP40 -605011 sc-eQTL 2.31e-01 0.0741 0.0617 0.553 Other_T L1
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 9.87e-01 -0.00105 0.0661 0.553 Other_T L1
ENSG00000134644 PUM1 -374214 sc-eQTL 1.34e-01 -0.0891 0.0592 0.553 Other_T L1
ENSG00000162511 LAPTM5 -65997 sc-eQTL 1.09e-02 0.123 0.048 0.553 Other_T L1
ENSG00000162517 PEF1 -953119 sc-eQTL 4.97e-01 0.0443 0.065 0.553 Other_T L1
ENSG00000186056 MATN1-AS1 -26727 sc-eQTL 4.14e-01 0.0653 0.0797 0.553 Other_T L1
ENSG00000287510 AL137857.1 -39916 sc-eQTL 4.53e-02 -0.166 0.0824 0.553 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -605011 sc-eQTL 9.76e-01 0.00315 0.104 0.564 B_Activated L2
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 3.89e-01 0.0903 0.105 0.564 B_Activated L2
ENSG00000134644 PUM1 -374214 sc-eQTL 4.31e-01 -0.0768 0.0972 0.564 B_Activated L2
ENSG00000162510 MATN1 -31808 sc-eQTL 7.77e-01 -0.0242 0.0851 0.564 B_Activated L2
ENSG00000162511 LAPTM5 -65997 sc-eQTL 1.69e-01 0.0816 0.059 0.564 B_Activated L2
ENSG00000162517 PEF1 -953119 sc-eQTL 1.91e-01 0.132 0.101 0.564 B_Activated L2
ENSG00000186056 MATN1-AS1 -26727 sc-eQTL 8.05e-01 0.0237 0.0958 0.564 B_Activated L2
ENSG00000287510 AL137857.1 -39916 sc-eQTL 9.24e-01 -0.00806 0.0848 0.564 B_Activated L2
ENSG00000060688 SNRNP40 -605011 sc-eQTL 2.15e-01 -0.117 0.094 0.554 B_Intermediate L2
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 6.53e-01 -0.0354 0.0786 0.554 B_Intermediate L2
ENSG00000134644 PUM1 -374214 sc-eQTL 8.66e-01 0.0125 0.0742 0.554 B_Intermediate L2
ENSG00000162510 MATN1 -31808 sc-eQTL 7.28e-01 -0.0268 0.0772 0.554 B_Intermediate L2
ENSG00000162511 LAPTM5 -65997 sc-eQTL 3.85e-01 0.0412 0.0473 0.554 B_Intermediate L2
ENSG00000162517 PEF1 -953119 sc-eQTL 9.34e-01 -0.00731 0.088 0.554 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -26727 sc-eQTL 5.57e-01 0.039 0.0665 0.554 B_Intermediate L2
ENSG00000287510 AL137857.1 -39916 sc-eQTL 4.26e-01 0.0593 0.0743 0.554 B_Intermediate L2
ENSG00000060688 SNRNP40 -605011 sc-eQTL 5.76e-01 0.0529 0.0945 0.554 B_Memory L2
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 5.94e-01 0.0464 0.087 0.554 B_Memory L2
ENSG00000134644 PUM1 -374214 sc-eQTL 7.45e-01 0.0247 0.0758 0.554 B_Memory L2
ENSG00000162510 MATN1 -31808 sc-eQTL 7.00e-01 -0.028 0.0725 0.554 B_Memory L2
ENSG00000162511 LAPTM5 -65997 sc-eQTL 4.72e-01 0.0463 0.0642 0.554 B_Memory L2
ENSG00000162517 PEF1 -953119 sc-eQTL 3.66e-01 0.0776 0.0857 0.554 B_Memory L2
ENSG00000186056 MATN1-AS1 -26727 sc-eQTL 6.90e-01 -0.0294 0.0735 0.554 B_Memory L2
ENSG00000287510 AL137857.1 -39916 sc-eQTL 9.78e-01 -0.00237 0.0862 0.554 B_Memory L2
ENSG00000060688 SNRNP40 -605011 sc-eQTL 4.75e-03 0.232 0.0814 0.553 B_Naive1 L2
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 7.87e-01 0.0194 0.0716 0.553 B_Naive1 L2
ENSG00000134644 PUM1 -374214 sc-eQTL 8.86e-01 0.00907 0.0632 0.553 B_Naive1 L2
ENSG00000162510 MATN1 -31808 sc-eQTL 1.94e-01 -0.0832 0.0638 0.553 B_Naive1 L2
ENSG00000162511 LAPTM5 -65997 sc-eQTL 3.17e-01 0.0428 0.0427 0.553 B_Naive1 L2
ENSG00000162517 PEF1 -953119 sc-eQTL 1.24e-01 0.116 0.0751 0.553 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -26727 sc-eQTL 4.76e-01 0.0401 0.0562 0.553 B_Naive1 L2
ENSG00000287510 AL137857.1 -39916 sc-eQTL 1.50e-01 0.0998 0.0691 0.553 B_Naive1 L2
ENSG00000060688 SNRNP40 -605011 sc-eQTL 9.00e-01 0.0111 0.0889 0.552 B_Naive2 L2
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 5.39e-03 -0.203 0.072 0.552 B_Naive2 L2
ENSG00000134644 PUM1 -374214 sc-eQTL 1.80e-02 -0.169 0.0708 0.552 B_Naive2 L2
ENSG00000162510 MATN1 -31808 sc-eQTL 7.38e-01 -0.0231 0.0689 0.552 B_Naive2 L2
ENSG00000162511 LAPTM5 -65997 sc-eQTL 7.66e-01 0.0139 0.0468 0.552 B_Naive2 L2
ENSG00000162517 PEF1 -953119 sc-eQTL 6.69e-01 0.0364 0.0851 0.552 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -26727 sc-eQTL 1.09e-01 0.109 0.0677 0.552 B_Naive2 L2
ENSG00000287510 AL137857.1 -39916 sc-eQTL 6.19e-01 0.0367 0.0736 0.552 B_Naive2 L2
ENSG00000060688 SNRNP40 -605011 sc-eQTL 9.69e-01 -0.00342 0.0867 0.561 CD4_CTL L2
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 3.29e-01 -0.0833 0.085 0.561 CD4_CTL L2
ENSG00000134644 PUM1 -374214 sc-eQTL 3.19e-01 0.0833 0.0834 0.561 CD4_CTL L2
ENSG00000162511 LAPTM5 -65997 sc-eQTL 4.10e-01 0.0614 0.0744 0.561 CD4_CTL L2
ENSG00000162517 PEF1 -953119 sc-eQTL 3.91e-01 -0.0655 0.0763 0.561 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -26727 sc-eQTL 7.59e-01 0.025 0.0815 0.561 CD4_CTL L2
ENSG00000287510 AL137857.1 -39916 sc-eQTL 3.45e-01 0.068 0.0718 0.561 CD4_CTL L2
ENSG00000060688 SNRNP40 -605011 sc-eQTL 3.65e-01 0.0626 0.0689 0.553 CD4_Naive L2
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 7.95e-01 0.0159 0.0612 0.553 CD4_Naive L2
ENSG00000134644 PUM1 -374214 sc-eQTL 3.30e-01 -0.0476 0.0488 0.553 CD4_Naive L2
ENSG00000162511 LAPTM5 -65997 sc-eQTL 5.94e-02 0.0985 0.052 0.553 CD4_Naive L2
ENSG00000162517 PEF1 -953119 sc-eQTL 9.19e-01 -0.00585 0.0575 0.553 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -26727 sc-eQTL 4.24e-01 0.0426 0.0531 0.553 CD4_Naive L2
ENSG00000287510 AL137857.1 -39916 sc-eQTL 4.36e-01 0.0476 0.061 0.553 CD4_Naive L2
ENSG00000060688 SNRNP40 -605011 sc-eQTL 5.17e-01 0.0562 0.0866 0.553 CD4_TCM L2
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 9.52e-01 0.00421 0.0699 0.553 CD4_TCM L2
ENSG00000134644 PUM1 -374214 sc-eQTL 8.65e-01 -0.0106 0.0618 0.553 CD4_TCM L2
ENSG00000162511 LAPTM5 -65997 sc-eQTL 9.68e-01 -0.00206 0.0513 0.553 CD4_TCM L2
ENSG00000162517 PEF1 -953119 sc-eQTL 7.98e-01 -0.0176 0.0688 0.553 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -26727 sc-eQTL 1.46e-01 0.0944 0.0648 0.553 CD4_TCM L2
ENSG00000287510 AL137857.1 -39916 sc-eQTL 8.31e-01 -0.0155 0.0725 0.553 CD4_TCM L2
ENSG00000060688 SNRNP40 -605011 sc-eQTL 2.59e-01 0.0986 0.0872 0.553 CD4_TEM L2
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 4.78e-01 -0.0592 0.0833 0.553 CD4_TEM L2
ENSG00000134644 PUM1 -374214 sc-eQTL 5.55e-01 0.041 0.0694 0.553 CD4_TEM L2
ENSG00000162511 LAPTM5 -65997 sc-eQTL 4.80e-01 0.0496 0.0701 0.553 CD4_TEM L2
ENSG00000162517 PEF1 -953119 sc-eQTL 4.66e-01 -0.0574 0.0786 0.553 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -26727 sc-eQTL 6.16e-01 -0.0413 0.0821 0.553 CD4_TEM L2
ENSG00000287510 AL137857.1 -39916 sc-eQTL 6.33e-01 -0.0387 0.0809 0.553 CD4_TEM L2
ENSG00000060688 SNRNP40 -605011 sc-eQTL 9.54e-01 0.00537 0.0939 0.553 CD8_CTL L2
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 3.69e-01 0.0647 0.0719 0.553 CD8_CTL L2
ENSG00000134644 PUM1 -374214 sc-eQTL 3.25e-01 0.0688 0.0698 0.553 CD8_CTL L2
ENSG00000162511 LAPTM5 -65997 sc-eQTL 3.03e-01 0.0797 0.0772 0.553 CD8_CTL L2
ENSG00000162517 PEF1 -953119 sc-eQTL 4.50e-01 0.0509 0.0673 0.553 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -26727 sc-eQTL 2.45e-01 0.0945 0.0811 0.553 CD8_CTL L2
ENSG00000287510 AL137857.1 -39916 sc-eQTL 2.75e-01 -0.0836 0.0763 0.553 CD8_CTL L2
ENSG00000060688 SNRNP40 -605011 sc-eQTL 9.44e-02 0.145 0.0863 0.553 CD8_Naive L2
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 6.24e-02 -0.139 0.0743 0.553 CD8_Naive L2
ENSG00000134644 PUM1 -374214 sc-eQTL 9.73e-01 -0.00205 0.0603 0.553 CD8_Naive L2
ENSG00000162511 LAPTM5 -65997 sc-eQTL 8.93e-01 -0.00777 0.0577 0.553 CD8_Naive L2
ENSG00000162517 PEF1 -953119 sc-eQTL 7.46e-01 -0.026 0.0803 0.553 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -26727 sc-eQTL 1.91e-01 0.0942 0.0718 0.553 CD8_Naive L2
ENSG00000287510 AL137857.1 -39916 sc-eQTL 5.84e-01 0.043 0.0784 0.553 CD8_Naive L2
ENSG00000060688 SNRNP40 -605011 sc-eQTL 6.74e-01 0.0415 0.0985 0.553 CD8_TCM L2
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 1.63e-01 0.126 0.0898 0.553 CD8_TCM L2
ENSG00000134644 PUM1 -374214 sc-eQTL 7.84e-01 0.0233 0.0849 0.553 CD8_TCM L2
ENSG00000162511 LAPTM5 -65997 sc-eQTL 8.89e-01 0.0124 0.0888 0.553 CD8_TCM L2
ENSG00000162517 PEF1 -953119 sc-eQTL 9.34e-02 -0.152 0.0901 0.553 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -26727 sc-eQTL 5.02e-01 -0.0553 0.0821 0.553 CD8_TCM L2
ENSG00000287510 AL137857.1 -39916 sc-eQTL 7.79e-01 0.0234 0.0831 0.553 CD8_TCM L2
ENSG00000060688 SNRNP40 -605011 sc-eQTL 8.80e-01 0.0136 0.09 0.543 CD8_TEM L2
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 1.40e-01 -0.127 0.0858 0.543 CD8_TEM L2
ENSG00000134644 PUM1 -374214 sc-eQTL 3.39e-01 -0.0843 0.088 0.543 CD8_TEM L2
ENSG00000162511 LAPTM5 -65997 sc-eQTL 8.64e-01 0.0142 0.083 0.543 CD8_TEM L2
ENSG00000162517 PEF1 -953119 sc-eQTL 4.28e-01 -0.0619 0.078 0.543 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -26727 sc-eQTL 2.82e-01 -0.0926 0.0859 0.543 CD8_TEM L2
ENSG00000287510 AL137857.1 -39916 sc-eQTL 3.91e-01 0.0669 0.0778 0.543 CD8_TEM L2
ENSG00000060688 SNRNP40 -605011 sc-eQTL 8.43e-01 0.018 0.091 0.554 MAIT L2
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 9.28e-01 -0.00733 0.0806 0.554 MAIT L2
ENSG00000134644 PUM1 -374214 sc-eQTL 9.13e-01 0.00849 0.0773 0.554 MAIT L2
ENSG00000162511 LAPTM5 -65997 sc-eQTL 1.23e-01 0.112 0.0725 0.554 MAIT L2
ENSG00000162517 PEF1 -953119 sc-eQTL 5.55e-01 0.0473 0.08 0.554 MAIT L2
ENSG00000186056 MATN1-AS1 -26727 sc-eQTL 8.36e-01 0.0169 0.0812 0.554 MAIT L2
ENSG00000287510 AL137857.1 -39916 sc-eQTL 1.03e-01 -0.136 0.0831 0.554 MAIT L2
ENSG00000060688 SNRNP40 -605011 sc-eQTL 5.33e-01 0.0578 0.0924 0.556 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 9.05e-01 -0.00935 0.0781 0.556 NK_CD56bright L2
ENSG00000134644 PUM1 -374214 sc-eQTL 3.77e-01 0.0725 0.0819 0.556 NK_CD56bright L2
ENSG00000162511 LAPTM5 -65997 sc-eQTL 4.28e-02 0.163 0.0801 0.556 NK_CD56bright L2
ENSG00000162517 PEF1 -953119 sc-eQTL 7.07e-01 0.0296 0.0786 0.556 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -26727 sc-eQTL 7.86e-02 -0.143 0.0807 0.556 NK_CD56bright L2
ENSG00000287510 AL137857.1 -39916 sc-eQTL 8.71e-01 0.0131 0.0801 0.556 NK_CD56bright L2
ENSG00000060688 SNRNP40 -605011 sc-eQTL 2.80e-01 0.0947 0.0875 0.552 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 2.23e-02 -0.148 0.0641 0.552 NK_CD56dim L2
ENSG00000134644 PUM1 -374214 sc-eQTL 7.46e-01 0.0216 0.0666 0.552 NK_CD56dim L2
ENSG00000162511 LAPTM5 -65997 sc-eQTL 4.27e-01 -0.0564 0.0709 0.552 NK_CD56dim L2
ENSG00000162517 PEF1 -953119 sc-eQTL 5.75e-01 -0.0355 0.0631 0.552 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -26727 sc-eQTL 7.57e-01 0.0276 0.0889 0.552 NK_CD56dim L2
ENSG00000287510 AL137857.1 -39916 sc-eQTL 6.58e-01 0.0326 0.0733 0.552 NK_CD56dim L2
ENSG00000060688 SNRNP40 -605011 sc-eQTL 7.62e-01 -0.0284 0.0939 0.555 NK_HLA L2
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 2.48e-01 0.0968 0.0836 0.555 NK_HLA L2
ENSG00000134644 PUM1 -374214 sc-eQTL 1.06e-01 -0.132 0.0812 0.555 NK_HLA L2
ENSG00000162511 LAPTM5 -65997 sc-eQTL 9.97e-01 -0.000306 0.078 0.555 NK_HLA L2
ENSG00000162517 PEF1 -953119 sc-eQTL 7.59e-01 0.027 0.0878 0.555 NK_HLA L2
ENSG00000186056 MATN1-AS1 -26727 sc-eQTL 1.78e-01 0.112 0.0826 0.555 NK_HLA L2
ENSG00000287510 AL137857.1 -39916 sc-eQTL 8.19e-01 -0.0184 0.0802 0.555 NK_HLA L2
ENSG00000060688 SNRNP40 -605011 sc-eQTL 3.28e-01 0.0837 0.0855 0.552 NK_cytokine L2
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 4.91e-01 -0.0461 0.0668 0.552 NK_cytokine L2
ENSG00000134644 PUM1 -374214 sc-eQTL 1.03e-01 0.118 0.0718 0.552 NK_cytokine L2
ENSG00000162511 LAPTM5 -65997 sc-eQTL 8.94e-01 0.0107 0.0796 0.552 NK_cytokine L2
ENSG00000162517 PEF1 -953119 sc-eQTL 3.89e-01 0.0585 0.0677 0.552 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -26727 sc-eQTL 7.59e-01 0.0259 0.0844 0.552 NK_cytokine L2
ENSG00000287510 AL137857.1 -39916 sc-eQTL 4.19e-01 0.0634 0.0784 0.552 NK_cytokine L2
ENSG00000060688 SNRNP40 -605011 sc-eQTL 5.02e-01 0.071 0.105 0.544 PB L2
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 6.40e-01 -0.0573 0.122 0.544 PB L2
ENSG00000134644 PUM1 -374214 sc-eQTL 3.73e-01 0.0947 0.106 0.544 PB L2
ENSG00000162510 MATN1 -31808 sc-eQTL 8.03e-01 0.0248 0.0991 0.544 PB L2
ENSG00000162511 LAPTM5 -65997 sc-eQTL 5.68e-01 -0.0406 0.0707 0.544 PB L2
ENSG00000162517 PEF1 -953119 sc-eQTL 1.30e-01 0.165 0.108 0.544 PB L2
ENSG00000186056 MATN1-AS1 -26727 sc-eQTL 4.68e-01 0.0704 0.0967 0.544 PB L2
ENSG00000287510 AL137857.1 -39916 sc-eQTL 1.84e-01 -0.137 0.102 0.544 PB L2
ENSG00000060688 SNRNP40 -605011 sc-eQTL 5.32e-01 0.0429 0.0685 0.557 Pro_T L2
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 9.33e-01 0.00729 0.0871 0.557 Pro_T L2
ENSG00000134644 PUM1 -374214 sc-eQTL 1.09e-01 -0.13 0.0807 0.557 Pro_T L2
ENSG00000162511 LAPTM5 -65997 sc-eQTL 6.03e-01 0.0304 0.0582 0.557 Pro_T L2
ENSG00000162517 PEF1 -953119 sc-eQTL 3.47e-01 0.0805 0.0853 0.557 Pro_T L2
ENSG00000186056 MATN1-AS1 -26727 sc-eQTL 1.02e-01 -0.133 0.0809 0.557 Pro_T L2
ENSG00000287510 AL137857.1 -39916 sc-eQTL 1.32e-01 -0.113 0.0745 0.557 Pro_T L2
ENSG00000060688 SNRNP40 -605011 sc-eQTL 4.32e-01 0.0694 0.0882 0.553 Treg L2
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 5.94e-01 -0.0456 0.0854 0.553 Treg L2
ENSG00000134644 PUM1 -374214 sc-eQTL 7.39e-01 0.0228 0.0684 0.553 Treg L2
ENSG00000162511 LAPTM5 -65997 sc-eQTL 5.28e-01 0.0495 0.0783 0.553 Treg L2
ENSG00000162517 PEF1 -953119 sc-eQTL 4.66e-01 0.0617 0.0845 0.553 Treg L2
ENSG00000186056 MATN1-AS1 -26727 sc-eQTL 8.61e-01 0.014 0.0798 0.553 Treg L2
ENSG00000287510 AL137857.1 -39916 sc-eQTL 5.39e-01 -0.0491 0.0797 0.553 Treg L2
ENSG00000060688 SNRNP40 -605011 sc-eQTL 4.24e-01 0.0753 0.094 0.563 cDC L2
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 2.97e-01 0.106 0.102 0.563 cDC L2
ENSG00000134644 PUM1 -374214 sc-eQTL 1.14e-01 -0.138 0.087 0.563 cDC L2
ENSG00000162511 LAPTM5 -65997 sc-eQTL 2.09e-01 0.077 0.0611 0.563 cDC L2
ENSG00000162517 PEF1 -953119 sc-eQTL 9.56e-01 0.00491 0.0889 0.563 cDC L2
ENSG00000168528 SERINC2 -717788 sc-eQTL 1.48e-01 0.114 0.0784 0.563 cDC L2
ENSG00000284543 LINC01226 -814449 sc-eQTL 4.28e-01 0.0614 0.0773 0.563 cDC L2
ENSG00000287510 AL137857.1 -39916 sc-eQTL 7.80e-01 0.0233 0.0833 0.563 cDC L2
ENSG00000060688 SNRNP40 -605011 sc-eQTL 3.52e-01 0.0683 0.0733 0.553 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 4.67e-01 0.0597 0.0818 0.553 cMono_IL1B L2
ENSG00000134644 PUM1 -374214 sc-eQTL 2.54e-02 0.123 0.0548 0.553 cMono_IL1B L2
ENSG00000162511 LAPTM5 -65997 sc-eQTL 5.78e-01 -0.0271 0.0486 0.553 cMono_IL1B L2
ENSG00000162512 SDC3 -216981 sc-eQTL 8.79e-01 -0.014 0.0916 0.553 cMono_IL1B L2
ENSG00000162517 PEF1 -953119 sc-eQTL 2.79e-01 0.081 0.0747 0.553 cMono_IL1B L2
ENSG00000168528 SERINC2 -717788 sc-eQTL 4.65e-01 -0.0678 0.0926 0.553 cMono_IL1B L2
ENSG00000284543 LINC01226 -814449 sc-eQTL 6.13e-01 -0.0415 0.0819 0.553 cMono_IL1B L2
ENSG00000287510 AL137857.1 -39916 sc-eQTL 3.50e-01 -0.0714 0.0763 0.553 cMono_IL1B L2
ENSG00000060688 SNRNP40 -605011 sc-eQTL 9.41e-01 0.00577 0.0778 0.553 cMono_S100A L2
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 6.05e-01 0.0475 0.0918 0.553 cMono_S100A L2
ENSG00000134644 PUM1 -374214 sc-eQTL 6.09e-01 0.034 0.0664 0.553 cMono_S100A L2
ENSG00000162511 LAPTM5 -65997 sc-eQTL 3.69e-01 0.0459 0.0509 0.553 cMono_S100A L2
ENSG00000162512 SDC3 -216981 sc-eQTL 8.95e-01 -0.0116 0.0882 0.553 cMono_S100A L2
ENSG00000162517 PEF1 -953119 sc-eQTL 4.80e-01 -0.0563 0.0795 0.553 cMono_S100A L2
ENSG00000168528 SERINC2 -717788 sc-eQTL 4.24e-01 -0.0746 0.0932 0.553 cMono_S100A L2
ENSG00000284543 LINC01226 -814449 sc-eQTL 5.69e-01 -0.0432 0.0758 0.553 cMono_S100A L2
ENSG00000287510 AL137857.1 -39916 sc-eQTL 4.29e-01 -0.0603 0.076 0.553 cMono_S100A L2
ENSG00000060688 SNRNP40 -605011 sc-eQTL 6.12e-01 0.0572 0.112 0.573 gdT L2
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 4.41e-01 0.0745 0.0964 0.573 gdT L2
ENSG00000134644 PUM1 -374214 sc-eQTL 7.23e-01 0.0353 0.0996 0.573 gdT L2
ENSG00000162511 LAPTM5 -65997 sc-eQTL 5.03e-01 -0.0726 0.108 0.573 gdT L2
ENSG00000162517 PEF1 -953119 sc-eQTL 8.44e-01 0.0195 0.0991 0.573 gdT L2
ENSG00000186056 MATN1-AS1 -26727 sc-eQTL 8.24e-01 -0.0222 0.0999 0.573 gdT L2
ENSG00000287510 AL137857.1 -39916 sc-eQTL 2.43e-01 -0.113 0.0963 0.573 gdT L2
ENSG00000060688 SNRNP40 -605011 sc-eQTL 9.74e-01 -0.0028 0.0861 0.553 intMono L2
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 8.88e-01 -0.0131 0.0925 0.553 intMono L2
ENSG00000134644 PUM1 -374214 sc-eQTL 5.54e-01 0.0465 0.0784 0.553 intMono L2
ENSG00000162511 LAPTM5 -65997 sc-eQTL 8.05e-01 0.0152 0.0616 0.553 intMono L2
ENSG00000162512 SDC3 -216981 sc-eQTL 3.75e-01 -0.0749 0.0842 0.553 intMono L2
ENSG00000162517 PEF1 -953119 sc-eQTL 5.69e-01 0.0505 0.0885 0.553 intMono L2
ENSG00000168528 SERINC2 -717788 sc-eQTL 8.93e-01 -0.0119 0.0883 0.553 intMono L2
ENSG00000284543 LINC01226 -814449 sc-eQTL 4.41e-01 -0.0645 0.0835 0.553 intMono L2
ENSG00000287510 AL137857.1 -39916 sc-eQTL 6.94e-01 -0.0329 0.0836 0.553 intMono L2
ENSG00000060688 SNRNP40 -605011 sc-eQTL 4.79e-01 0.0571 0.0805 0.554 ncMono L2
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 5.12e-01 -0.0564 0.0859 0.554 ncMono L2
ENSG00000134644 PUM1 -374214 sc-eQTL 2.68e-01 0.0778 0.07 0.554 ncMono L2
ENSG00000162511 LAPTM5 -65997 sc-eQTL 2.31e-01 0.0764 0.0636 0.554 ncMono L2
ENSG00000162512 SDC3 -216981 sc-eQTL 9.28e-02 -0.12 0.071 0.554 ncMono L2
ENSG00000162517 PEF1 -953119 sc-eQTL 7.50e-02 0.146 0.0814 0.554 ncMono L2
ENSG00000168528 SERINC2 -717788 sc-eQTL 8.30e-01 -0.0168 0.0781 0.554 ncMono L2
ENSG00000284543 LINC01226 -814449 sc-eQTL 1.69e-01 0.107 0.0776 0.554 ncMono L2
ENSG00000287510 AL137857.1 -39916 sc-eQTL 8.75e-01 0.0127 0.0809 0.554 ncMono L2
ENSG00000060688 SNRNP40 -605011 sc-eQTL 2.41e-01 -0.106 0.0902 0.551 pDC L2
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 4.72e-01 -0.0716 0.0993 0.551 pDC L2
ENSG00000134644 PUM1 -374214 sc-eQTL 9.26e-01 0.00766 0.0825 0.551 pDC L2
ENSG00000162511 LAPTM5 -65997 sc-eQTL 8.62e-01 -0.0133 0.0767 0.551 pDC L2
ENSG00000162517 PEF1 -953119 sc-eQTL 4.59e-01 0.0738 0.0993 0.551 pDC L2
ENSG00000168528 SERINC2 -717788 sc-eQTL 4.83e-01 -0.0653 0.0928 0.551 pDC L2
ENSG00000284543 LINC01226 -814449 sc-eQTL 1.27e-01 -0.11 0.0717 0.551 pDC L2
ENSG00000287510 AL137857.1 -39916 sc-eQTL 4.14e-01 -0.0694 0.0847 0.551 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -605011 sc-eQTL 8.83e-01 0.0133 0.0903 0.553 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 7.56e-01 0.0233 0.0752 0.553 B_Memory LOneK1K
ENSG00000134644 PUM1 -374214 sc-eQTL 8.48e-01 -0.0128 0.0666 0.553 B_Memory LOneK1K
ENSG00000162510 MATN1 -31808 sc-eQTL 5.85e-01 -0.0415 0.0759 0.553 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -65997 sc-eQTL 1.49e-01 0.0687 0.0475 0.553 B_Memory LOneK1K
ENSG00000162517 PEF1 -953119 sc-eQTL 8.56e-01 -0.0143 0.0791 0.553 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -26727 sc-eQTL 5.57e-01 0.0371 0.0631 0.553 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -39916 sc-eQTL 3.78e-01 0.0607 0.0687 0.553 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -605011 sc-eQTL 2.60e-02 0.179 0.0799 0.553 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 2.01e-01 -0.0817 0.0637 0.553 B_Naive LOneK1K
ENSG00000134644 PUM1 -374214 sc-eQTL 3.95e-01 -0.0514 0.0604 0.553 B_Naive LOneK1K
ENSG00000162510 MATN1 -31808 sc-eQTL 3.11e-01 -0.059 0.0581 0.553 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -65997 sc-eQTL 3.57e-01 0.0377 0.0409 0.553 B_Naive LOneK1K
ENSG00000162517 PEF1 -953119 sc-eQTL 1.90e-01 0.098 0.0746 0.553 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -26727 sc-eQTL 3.83e-01 0.0462 0.0528 0.553 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -39916 sc-eQTL 9.13e-02 0.106 0.0625 0.553 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -605011 sc-eQTL 9.88e-01 0.00104 0.0696 0.553 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 5.70e-01 0.0448 0.0788 0.553 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -374214 sc-eQTL 6.17e-02 0.0937 0.0499 0.553 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -65997 sc-eQTL 9.77e-01 0.00128 0.0442 0.553 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -216981 sc-eQTL 9.91e-01 -0.00101 0.0902 0.553 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -953119 sc-eQTL 8.89e-01 -0.00883 0.0634 0.553 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -717788 sc-eQTL 3.19e-01 -0.0925 0.0926 0.553 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -814449 sc-eQTL 6.36e-01 -0.036 0.076 0.553 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -39916 sc-eQTL 4.92e-01 -0.0489 0.0711 0.553 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -605011 sc-eQTL 2.98e-01 0.0798 0.0765 0.552 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 1.93e-01 -0.109 0.0836 0.552 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -374214 sc-eQTL 3.01e-01 0.0711 0.0686 0.552 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -65997 sc-eQTL 8.10e-01 0.0133 0.055 0.552 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -216981 sc-eQTL 2.93e-01 -0.0845 0.0801 0.552 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -953119 sc-eQTL 1.17e-01 0.114 0.0726 0.552 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -717788 sc-eQTL 7.26e-01 -0.0292 0.0833 0.552 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -814449 sc-eQTL 8.64e-01 0.0135 0.079 0.552 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -39916 sc-eQTL 6.22e-01 -0.039 0.0791 0.552 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -605011 sc-eQTL 2.76e-02 0.182 0.0822 0.552 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -605205 sc-eQTL 9.78e-02 -0.0939 0.0565 0.552 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -374214 sc-eQTL 6.14e-01 0.0314 0.0622 0.552 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -65997 sc-eQTL 6.03e-01 -0.0362 0.0695 0.552 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -953119 sc-eQTL 7.06e-01 0.02 0.0528 0.552 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -26727 sc-eQTL 3.26e-01 0.0788 0.0801 0.552 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -39916 sc-eQTL 7.57e-01 -0.0215 0.0692 0.552 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162511 LAPTM5 -65997 eQTL 2.35e-05 -0.0425 0.01 0.0 0.0 0.416
ENSG00000168528 SERINC2 -717788 eQTL 0.018 0.0922 0.0389 0.0 0.0 0.416

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162511 LAPTM5 -65997 1.24e-05 1e-05 1.25e-06 4.25e-06 1.92e-06 4.92e-06 1.32e-05 1.49e-06 9.65e-06 4.62e-06 1.13e-05 4.5e-06 1.51e-05 3.9e-06 2.19e-06 6.48e-06 3.74e-06 7.79e-06 2.29e-06 2.11e-06 4.74e-06 9.11e-06 1.21e-05 2.68e-06 1.25e-05 3.12e-06 4.35e-06 2.61e-06 1.26e-05 7.78e-06 4.97e-06 4.97e-07 7.77e-07 2.75e-06 3.56e-06 1.22e-06 1.03e-06 9.43e-07 1.29e-06 7.61e-07 4.72e-07 1.16e-05 1.31e-06 1.96e-07 7.82e-07 1.18e-06 8.82e-07 6.85e-07 5.64e-07