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Genes within 1Mb (chr1:30685255:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -611533 sc-eQTL 2.12e-01 -0.101 0.0807 0.323 B L1
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 3.91e-01 -0.0556 0.0647 0.323 B L1
ENSG00000134644 PUM1 -380736 sc-eQTL 5.35e-01 0.0338 0.0543 0.323 B L1
ENSG00000162510 MATN1 -38330 sc-eQTL 5.61e-01 -0.0333 0.0571 0.323 B L1
ENSG00000162511 LAPTM5 -72519 sc-eQTL 3.65e-01 0.0406 0.0447 0.323 B L1
ENSG00000162517 PEF1 -959641 sc-eQTL 2.40e-01 0.0793 0.0674 0.323 B L1
ENSG00000186056 MATN1-AS1 -33249 sc-eQTL 9.86e-01 0.000899 0.0525 0.323 B L1
ENSG00000287510 AL137857.1 -46438 sc-eQTL 7.77e-02 0.109 0.0617 0.323 B L1
ENSG00000060688 SNRNP40 -611533 sc-eQTL 1.55e-01 0.101 0.071 0.323 CD4T L1
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 2.16e-01 0.0689 0.0556 0.323 CD4T L1
ENSG00000134644 PUM1 -380736 sc-eQTL 1.62e-01 -0.0693 0.0494 0.323 CD4T L1
ENSG00000162511 LAPTM5 -72519 sc-eQTL 9.22e-01 0.00536 0.055 0.323 CD4T L1
ENSG00000162517 PEF1 -959641 sc-eQTL 7.37e-01 -0.0193 0.0575 0.323 CD4T L1
ENSG00000186056 MATN1-AS1 -33249 sc-eQTL 8.52e-01 0.00919 0.0492 0.323 CD4T L1
ENSG00000287510 AL137857.1 -46438 sc-eQTL 9.08e-01 -0.00682 0.0589 0.323 CD4T L1
ENSG00000060688 SNRNP40 -611533 sc-eQTL 7.10e-01 0.0349 0.0936 0.323 CD8T L1
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 7.00e-01 -0.024 0.0623 0.323 CD8T L1
ENSG00000134644 PUM1 -380736 sc-eQTL 7.37e-01 0.0185 0.0548 0.323 CD8T L1
ENSG00000162511 LAPTM5 -72519 sc-eQTL 9.22e-01 0.00523 0.0533 0.323 CD8T L1
ENSG00000162517 PEF1 -959641 sc-eQTL 5.32e-01 -0.041 0.0656 0.323 CD8T L1
ENSG00000186056 MATN1-AS1 -33249 sc-eQTL 9.56e-01 0.00342 0.0624 0.323 CD8T L1
ENSG00000287510 AL137857.1 -46438 sc-eQTL 4.53e-01 0.0589 0.0783 0.323 CD8T L1
ENSG00000060688 SNRNP40 -611533 sc-eQTL 5.98e-01 -0.0429 0.0813 0.322 DC L1
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 6.85e-02 -0.175 0.0956 0.322 DC L1
ENSG00000134644 PUM1 -380736 sc-eQTL 8.35e-01 -0.0157 0.0755 0.322 DC L1
ENSG00000162511 LAPTM5 -72519 sc-eQTL 1.48e-01 0.0779 0.0536 0.322 DC L1
ENSG00000162517 PEF1 -959641 sc-eQTL 2.35e-01 -0.104 0.0871 0.322 DC L1
ENSG00000168528 SERINC2 -724310 sc-eQTL 1.84e-01 0.118 0.0885 0.322 DC L1
ENSG00000284543 LINC01226 -820971 sc-eQTL 9.64e-01 -0.00268 0.0589 0.322 DC L1
ENSG00000287510 AL137857.1 -46438 sc-eQTL 4.34e-01 -0.0667 0.0851 0.322 DC L1
ENSG00000060688 SNRNP40 -611533 sc-eQTL 2.76e-01 0.0687 0.0629 0.323 Mono L1
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 5.25e-01 0.0497 0.0781 0.323 Mono L1
ENSG00000134644 PUM1 -380736 sc-eQTL 8.17e-01 0.0116 0.0501 0.323 Mono L1
ENSG00000162511 LAPTM5 -72519 sc-eQTL 6.90e-01 -0.0184 0.0461 0.323 Mono L1
ENSG00000162512 SDC3 -223503 sc-eQTL 1.97e-01 -0.114 0.0882 0.323 Mono L1
ENSG00000162517 PEF1 -959641 sc-eQTL 8.08e-01 0.0151 0.0621 0.323 Mono L1
ENSG00000168528 SERINC2 -724310 sc-eQTL 7.44e-01 0.031 0.095 0.323 Mono L1
ENSG00000284543 LINC01226 -820971 sc-eQTL 4.95e-01 -0.0571 0.0836 0.323 Mono L1
ENSG00000287510 AL137857.1 -46438 sc-eQTL 9.42e-01 -0.00532 0.0732 0.323 Mono L1
ENSG00000060688 SNRNP40 -611533 sc-eQTL 1.85e-02 0.208 0.0878 0.32 NK L1
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 8.13e-02 -0.106 0.0604 0.32 NK L1
ENSG00000134644 PUM1 -380736 sc-eQTL 3.39e-01 0.061 0.0637 0.32 NK L1
ENSG00000162511 LAPTM5 -72519 sc-eQTL 9.51e-01 0.00453 0.0735 0.32 NK L1
ENSG00000162517 PEF1 -959641 sc-eQTL 9.30e-01 0.00471 0.0537 0.32 NK L1
ENSG00000186056 MATN1-AS1 -33249 sc-eQTL 9.21e-01 -0.00817 0.0826 0.32 NK L1
ENSG00000287510 AL137857.1 -46438 sc-eQTL 6.70e-01 0.0326 0.0762 0.32 NK L1
ENSG00000060688 SNRNP40 -611533 sc-eQTL 9.28e-01 -0.006 0.0661 0.323 Other_T L1
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 3.50e-01 -0.066 0.0705 0.323 Other_T L1
ENSG00000134644 PUM1 -380736 sc-eQTL 3.09e-01 -0.0646 0.0633 0.323 Other_T L1
ENSG00000162511 LAPTM5 -72519 sc-eQTL 1.24e-02 0.129 0.0513 0.323 Other_T L1
ENSG00000162517 PEF1 -959641 sc-eQTL 6.82e-01 0.0285 0.0695 0.323 Other_T L1
ENSG00000186056 MATN1-AS1 -33249 sc-eQTL 4.09e-01 0.0703 0.0851 0.323 Other_T L1
ENSG00000287510 AL137857.1 -46438 sc-eQTL 9.76e-01 -0.00271 0.0888 0.323 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -611533 sc-eQTL 2.06e-01 0.137 0.108 0.327 B_Activated L2
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 3.95e-01 0.093 0.109 0.327 B_Activated L2
ENSG00000134644 PUM1 -380736 sc-eQTL 4.65e-01 -0.0742 0.101 0.327 B_Activated L2
ENSG00000162510 MATN1 -38330 sc-eQTL 3.11e-01 -0.0899 0.0885 0.327 B_Activated L2
ENSG00000162511 LAPTM5 -72519 sc-eQTL 6.64e-01 0.027 0.0619 0.327 B_Activated L2
ENSG00000162517 PEF1 -959641 sc-eQTL 5.99e-02 0.197 0.104 0.327 B_Activated L2
ENSG00000186056 MATN1-AS1 -33249 sc-eQTL 4.12e-01 0.0821 0.0997 0.327 B_Activated L2
ENSG00000287510 AL137857.1 -46438 sc-eQTL 5.36e-01 0.0548 0.0883 0.327 B_Activated L2
ENSG00000060688 SNRNP40 -611533 sc-eQTL 2.89e-01 -0.104 0.098 0.322 B_Intermediate L2
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 7.11e-01 0.0304 0.0819 0.322 B_Intermediate L2
ENSG00000134644 PUM1 -380736 sc-eQTL 9.78e-01 0.00215 0.0773 0.322 B_Intermediate L2
ENSG00000162510 MATN1 -38330 sc-eQTL 3.94e-01 0.0686 0.0803 0.322 B_Intermediate L2
ENSG00000162511 LAPTM5 -72519 sc-eQTL 4.68e-01 0.0359 0.0493 0.322 B_Intermediate L2
ENSG00000162517 PEF1 -959641 sc-eQTL 7.82e-01 -0.0254 0.0916 0.322 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -33249 sc-eQTL 5.40e-01 -0.0424 0.0692 0.322 B_Intermediate L2
ENSG00000287510 AL137857.1 -46438 sc-eQTL 8.45e-01 -0.0151 0.0775 0.322 B_Intermediate L2
ENSG00000060688 SNRNP40 -611533 sc-eQTL 2.08e-01 -0.123 0.0971 0.321 B_Memory L2
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 1.09e-01 0.144 0.0892 0.321 B_Memory L2
ENSG00000134644 PUM1 -380736 sc-eQTL 7.13e-01 0.0288 0.0781 0.321 B_Memory L2
ENSG00000162510 MATN1 -38330 sc-eQTL 6.42e-01 -0.0348 0.0747 0.321 B_Memory L2
ENSG00000162511 LAPTM5 -72519 sc-eQTL 8.87e-01 0.00946 0.0663 0.321 B_Memory L2
ENSG00000162517 PEF1 -959641 sc-eQTL 5.61e-01 0.0515 0.0884 0.321 B_Memory L2
ENSG00000186056 MATN1-AS1 -33249 sc-eQTL 7.20e-01 0.0272 0.0758 0.321 B_Memory L2
ENSG00000287510 AL137857.1 -46438 sc-eQTL 5.63e-01 0.0515 0.0887 0.321 B_Memory L2
ENSG00000060688 SNRNP40 -611533 sc-eQTL 3.63e-01 0.0798 0.0875 0.323 B_Naive1 L2
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 2.35e-01 0.0899 0.0754 0.323 B_Naive1 L2
ENSG00000134644 PUM1 -380736 sc-eQTL 2.08e-01 0.084 0.0665 0.323 B_Naive1 L2
ENSG00000162510 MATN1 -38330 sc-eQTL 2.79e-01 -0.0733 0.0676 0.323 B_Naive1 L2
ENSG00000162511 LAPTM5 -72519 sc-eQTL 2.28e-01 0.0545 0.0451 0.323 B_Naive1 L2
ENSG00000162517 PEF1 -959641 sc-eQTL 1.35e-01 0.119 0.0794 0.323 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -33249 sc-eQTL 8.58e-01 -0.0107 0.0594 0.323 B_Naive1 L2
ENSG00000287510 AL137857.1 -46438 sc-eQTL 1.31e-01 0.111 0.073 0.323 B_Naive1 L2
ENSG00000060688 SNRNP40 -611533 sc-eQTL 7.97e-01 -0.0244 0.0948 0.32 B_Naive2 L2
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 2.95e-03 -0.231 0.0767 0.32 B_Naive2 L2
ENSG00000134644 PUM1 -380736 sc-eQTL 8.41e-02 -0.132 0.0761 0.32 B_Naive2 L2
ENSG00000162510 MATN1 -38330 sc-eQTL 9.65e-01 0.00325 0.0736 0.32 B_Naive2 L2
ENSG00000162511 LAPTM5 -72519 sc-eQTL 3.97e-01 0.0423 0.0499 0.32 B_Naive2 L2
ENSG00000162517 PEF1 -959641 sc-eQTL 7.30e-02 0.163 0.0902 0.32 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -33249 sc-eQTL 6.57e-01 0.0323 0.0727 0.32 B_Naive2 L2
ENSG00000287510 AL137857.1 -46438 sc-eQTL 3.13e-01 0.0793 0.0784 0.32 B_Naive2 L2
ENSG00000060688 SNRNP40 -611533 sc-eQTL 6.47e-01 -0.0419 0.0913 0.33 CD4_CTL L2
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 2.39e-01 -0.106 0.0895 0.33 CD4_CTL L2
ENSG00000134644 PUM1 -380736 sc-eQTL 6.40e-01 0.0412 0.088 0.33 CD4_CTL L2
ENSG00000162511 LAPTM5 -72519 sc-eQTL 9.87e-01 0.00132 0.0785 0.33 CD4_CTL L2
ENSG00000162517 PEF1 -959641 sc-eQTL 1.97e-01 -0.104 0.0802 0.33 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -33249 sc-eQTL 1.77e-01 0.116 0.0855 0.33 CD4_CTL L2
ENSG00000287510 AL137857.1 -46438 sc-eQTL 7.32e-01 0.026 0.0758 0.33 CD4_CTL L2
ENSG00000060688 SNRNP40 -611533 sc-eQTL 3.71e-01 0.067 0.0747 0.323 CD4_Naive L2
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 7.25e-01 0.0233 0.0663 0.323 CD4_Naive L2
ENSG00000134644 PUM1 -380736 sc-eQTL 1.25e-01 -0.0811 0.0527 0.323 CD4_Naive L2
ENSG00000162511 LAPTM5 -72519 sc-eQTL 7.10e-01 0.0211 0.0567 0.323 CD4_Naive L2
ENSG00000162517 PEF1 -959641 sc-eQTL 5.67e-01 0.0357 0.0622 0.323 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -33249 sc-eQTL 7.66e-01 -0.0172 0.0576 0.323 CD4_Naive L2
ENSG00000287510 AL137857.1 -46438 sc-eQTL 3.73e-01 0.0589 0.066 0.323 CD4_Naive L2
ENSG00000060688 SNRNP40 -611533 sc-eQTL 1.31e-01 0.142 0.0935 0.323 CD4_TCM L2
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 4.64e-01 0.0555 0.0757 0.323 CD4_TCM L2
ENSG00000134644 PUM1 -380736 sc-eQTL 6.06e-01 0.0346 0.067 0.323 CD4_TCM L2
ENSG00000162511 LAPTM5 -72519 sc-eQTL 3.33e-01 -0.0538 0.0555 0.323 CD4_TCM L2
ENSG00000162517 PEF1 -959641 sc-eQTL 9.87e-01 0.00119 0.0746 0.323 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -33249 sc-eQTL 8.90e-01 0.00978 0.0706 0.323 CD4_TCM L2
ENSG00000287510 AL137857.1 -46438 sc-eQTL 1.27e-01 -0.12 0.0782 0.323 CD4_TCM L2
ENSG00000060688 SNRNP40 -611533 sc-eQTL 1.48e-01 0.134 0.0924 0.323 CD4_TEM L2
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 3.34e-01 0.0855 0.0883 0.323 CD4_TEM L2
ENSG00000134644 PUM1 -380736 sc-eQTL 9.58e-01 -0.00389 0.0737 0.323 CD4_TEM L2
ENSG00000162511 LAPTM5 -72519 sc-eQTL 5.49e-01 0.0447 0.0745 0.323 CD4_TEM L2
ENSG00000162517 PEF1 -959641 sc-eQTL 2.95e-01 -0.0874 0.0833 0.323 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -33249 sc-eQTL 8.90e-01 -0.0121 0.0872 0.323 CD4_TEM L2
ENSG00000287510 AL137857.1 -46438 sc-eQTL 3.31e-01 -0.0835 0.0858 0.323 CD4_TEM L2
ENSG00000060688 SNRNP40 -611533 sc-eQTL 5.53e-01 -0.0593 0.0998 0.323 CD8_CTL L2
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 2.93e-01 0.0805 0.0764 0.323 CD8_CTL L2
ENSG00000134644 PUM1 -380736 sc-eQTL 3.58e-01 0.0684 0.0742 0.323 CD8_CTL L2
ENSG00000162511 LAPTM5 -72519 sc-eQTL 7.11e-01 0.0306 0.0823 0.323 CD8_CTL L2
ENSG00000162517 PEF1 -959641 sc-eQTL 8.63e-01 0.0124 0.0717 0.323 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -33249 sc-eQTL 8.18e-01 0.0199 0.0866 0.323 CD8_CTL L2
ENSG00000287510 AL137857.1 -46438 sc-eQTL 8.01e-01 -0.0205 0.0814 0.323 CD8_CTL L2
ENSG00000060688 SNRNP40 -611533 sc-eQTL 7.79e-01 0.0263 0.0937 0.323 CD8_Naive L2
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 3.00e-02 -0.175 0.08 0.323 CD8_Naive L2
ENSG00000134644 PUM1 -380736 sc-eQTL 5.50e-01 -0.0389 0.065 0.323 CD8_Naive L2
ENSG00000162511 LAPTM5 -72519 sc-eQTL 3.97e-01 0.0528 0.0622 0.323 CD8_Naive L2
ENSG00000162517 PEF1 -959641 sc-eQTL 8.70e-01 -0.0142 0.0867 0.323 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -33249 sc-eQTL 1.01e-01 0.127 0.0773 0.323 CD8_Naive L2
ENSG00000287510 AL137857.1 -46438 sc-eQTL 2.73e-01 0.0929 0.0845 0.323 CD8_Naive L2
ENSG00000060688 SNRNP40 -611533 sc-eQTL 7.58e-01 -0.0322 0.104 0.324 CD8_TCM L2
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 3.67e-01 0.0862 0.0954 0.324 CD8_TCM L2
ENSG00000134644 PUM1 -380736 sc-eQTL 6.97e-01 -0.0351 0.0899 0.324 CD8_TCM L2
ENSG00000162511 LAPTM5 -72519 sc-eQTL 9.99e-01 -8.06e-05 0.0941 0.324 CD8_TCM L2
ENSG00000162517 PEF1 -959641 sc-eQTL 9.49e-03 -0.248 0.0945 0.324 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -33249 sc-eQTL 2.44e-01 -0.102 0.0868 0.324 CD8_TCM L2
ENSG00000287510 AL137857.1 -46438 sc-eQTL 9.83e-01 0.00192 0.088 0.324 CD8_TCM L2
ENSG00000060688 SNRNP40 -611533 sc-eQTL 7.90e-01 -0.0257 0.0962 0.317 CD8_TEM L2
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 9.87e-01 0.00153 0.0922 0.317 CD8_TEM L2
ENSG00000134644 PUM1 -380736 sc-eQTL 3.68e-01 -0.0849 0.0941 0.317 CD8_TEM L2
ENSG00000162511 LAPTM5 -72519 sc-eQTL 2.97e-02 0.192 0.0876 0.317 CD8_TEM L2
ENSG00000162517 PEF1 -959641 sc-eQTL 3.05e-01 -0.0856 0.0832 0.317 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -33249 sc-eQTL 5.00e-01 -0.062 0.0919 0.317 CD8_TEM L2
ENSG00000287510 AL137857.1 -46438 sc-eQTL 3.12e-01 0.0841 0.083 0.317 CD8_TEM L2
ENSG00000060688 SNRNP40 -611533 sc-eQTL 8.25e-01 0.0214 0.0965 0.325 MAIT L2
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 9.14e-01 0.00926 0.0855 0.325 MAIT L2
ENSG00000134644 PUM1 -380736 sc-eQTL 5.95e-01 0.0435 0.0819 0.325 MAIT L2
ENSG00000162511 LAPTM5 -72519 sc-eQTL 2.24e-02 0.176 0.0763 0.325 MAIT L2
ENSG00000162517 PEF1 -959641 sc-eQTL 7.25e-01 0.0299 0.0849 0.325 MAIT L2
ENSG00000186056 MATN1-AS1 -33249 sc-eQTL 8.60e-01 0.0152 0.0861 0.325 MAIT L2
ENSG00000287510 AL137857.1 -46438 sc-eQTL 4.73e-01 -0.0637 0.0886 0.325 MAIT L2
ENSG00000060688 SNRNP40 -611533 sc-eQTL 4.28e-01 0.0783 0.0985 0.32 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 5.59e-01 -0.0487 0.0833 0.32 NK_CD56bright L2
ENSG00000134644 PUM1 -380736 sc-eQTL 3.66e-02 0.182 0.0866 0.32 NK_CD56bright L2
ENSG00000162511 LAPTM5 -72519 sc-eQTL 5.89e-02 0.163 0.0856 0.32 NK_CD56bright L2
ENSG00000162517 PEF1 -959641 sc-eQTL 8.46e-01 -0.0164 0.0839 0.32 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -33249 sc-eQTL 3.35e-01 -0.0836 0.0866 0.32 NK_CD56bright L2
ENSG00000287510 AL137857.1 -46438 sc-eQTL 6.42e-01 0.0398 0.0854 0.32 NK_CD56bright L2
ENSG00000060688 SNRNP40 -611533 sc-eQTL 7.78e-01 0.0266 0.0943 0.321 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 4.63e-02 -0.138 0.0691 0.321 NK_CD56dim L2
ENSG00000134644 PUM1 -380736 sc-eQTL 8.31e-01 0.0153 0.0716 0.321 NK_CD56dim L2
ENSG00000162511 LAPTM5 -72519 sc-eQTL 9.83e-01 0.00161 0.0763 0.321 NK_CD56dim L2
ENSG00000162517 PEF1 -959641 sc-eQTL 8.83e-01 -0.00998 0.0679 0.321 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -33249 sc-eQTL 7.12e-01 -0.0353 0.0956 0.321 NK_CD56dim L2
ENSG00000287510 AL137857.1 -46438 sc-eQTL 6.20e-01 0.0391 0.0788 0.321 NK_CD56dim L2
ENSG00000060688 SNRNP40 -611533 sc-eQTL 7.22e-01 0.0351 0.0986 0.322 NK_HLA L2
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 3.06e-01 0.0902 0.0878 0.322 NK_HLA L2
ENSG00000134644 PUM1 -380736 sc-eQTL 2.46e-01 -0.0995 0.0855 0.322 NK_HLA L2
ENSG00000162511 LAPTM5 -72519 sc-eQTL 6.08e-01 0.042 0.0819 0.322 NK_HLA L2
ENSG00000162517 PEF1 -959641 sc-eQTL 4.44e-01 0.0707 0.0922 0.322 NK_HLA L2
ENSG00000186056 MATN1-AS1 -33249 sc-eQTL 4.01e-01 0.0732 0.087 0.322 NK_HLA L2
ENSG00000287510 AL137857.1 -46438 sc-eQTL 9.96e-01 0.000454 0.0843 0.322 NK_HLA L2
ENSG00000060688 SNRNP40 -611533 sc-eQTL 4.94e-02 0.179 0.0906 0.321 NK_cytokine L2
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 4.97e-01 -0.0486 0.0713 0.321 NK_cytokine L2
ENSG00000134644 PUM1 -380736 sc-eQTL 7.31e-01 0.0265 0.0772 0.321 NK_cytokine L2
ENSG00000162511 LAPTM5 -72519 sc-eQTL 9.79e-01 0.00227 0.085 0.321 NK_cytokine L2
ENSG00000162517 PEF1 -959641 sc-eQTL 7.91e-01 -0.0192 0.0724 0.321 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -33249 sc-eQTL 7.40e-01 0.0299 0.0901 0.321 NK_cytokine L2
ENSG00000287510 AL137857.1 -46438 sc-eQTL 2.64e-01 0.0935 0.0836 0.321 NK_cytokine L2
ENSG00000060688 SNRNP40 -611533 sc-eQTL 9.70e-01 -0.00396 0.105 0.319 PB L2
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 2.38e-01 -0.144 0.121 0.319 PB L2
ENSG00000134644 PUM1 -380736 sc-eQTL 8.35e-01 -0.0222 0.106 0.319 PB L2
ENSG00000162510 MATN1 -38330 sc-eQTL 6.38e-01 -0.0465 0.0987 0.319 PB L2
ENSG00000162511 LAPTM5 -72519 sc-eQTL 3.17e-01 -0.0706 0.0702 0.319 PB L2
ENSG00000162517 PEF1 -959641 sc-eQTL 7.86e-01 -0.0296 0.109 0.319 PB L2
ENSG00000186056 MATN1-AS1 -33249 sc-eQTL 1.64e-01 0.134 0.0957 0.319 PB L2
ENSG00000287510 AL137857.1 -46438 sc-eQTL 9.71e-01 0.00374 0.103 0.319 PB L2
ENSG00000060688 SNRNP40 -611533 sc-eQTL 4.36e-01 -0.0565 0.0724 0.322 Pro_T L2
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 7.00e-01 -0.0355 0.092 0.322 Pro_T L2
ENSG00000134644 PUM1 -380736 sc-eQTL 6.11e-01 0.0438 0.0858 0.322 Pro_T L2
ENSG00000162511 LAPTM5 -72519 sc-eQTL 5.21e-01 -0.0396 0.0615 0.322 Pro_T L2
ENSG00000162517 PEF1 -959641 sc-eQTL 7.69e-01 -0.0265 0.0904 0.322 Pro_T L2
ENSG00000186056 MATN1-AS1 -33249 sc-eQTL 4.13e-01 -0.0705 0.0859 0.322 Pro_T L2
ENSG00000287510 AL137857.1 -46438 sc-eQTL 2.21e-01 -0.0968 0.0789 0.322 Pro_T L2
ENSG00000060688 SNRNP40 -611533 sc-eQTL 6.66e-01 -0.0406 0.0939 0.323 Treg L2
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 4.06e-01 0.0756 0.0907 0.323 Treg L2
ENSG00000134644 PUM1 -380736 sc-eQTL 7.30e-01 0.0252 0.0727 0.323 Treg L2
ENSG00000162511 LAPTM5 -72519 sc-eQTL 6.99e-01 0.0323 0.0833 0.323 Treg L2
ENSG00000162517 PEF1 -959641 sc-eQTL 6.85e-01 -0.0365 0.0899 0.323 Treg L2
ENSG00000186056 MATN1-AS1 -33249 sc-eQTL 7.59e-01 0.0261 0.0848 0.323 Treg L2
ENSG00000287510 AL137857.1 -46438 sc-eQTL 9.35e-01 0.00689 0.0848 0.323 Treg L2
ENSG00000060688 SNRNP40 -611533 sc-eQTL 6.69e-01 0.0402 0.094 0.329 cDC L2
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 1.53e-01 -0.145 0.101 0.329 cDC L2
ENSG00000134644 PUM1 -380736 sc-eQTL 9.60e-01 -0.00434 0.0874 0.329 cDC L2
ENSG00000162511 LAPTM5 -72519 sc-eQTL 4.17e-01 0.0497 0.0612 0.329 cDC L2
ENSG00000162517 PEF1 -959641 sc-eQTL 4.81e-01 -0.0626 0.0886 0.329 cDC L2
ENSG00000168528 SERINC2 -724310 sc-eQTL 6.85e-02 0.143 0.078 0.329 cDC L2
ENSG00000284543 LINC01226 -820971 sc-eQTL 7.30e-01 0.0267 0.0773 0.329 cDC L2
ENSG00000287510 AL137857.1 -46438 sc-eQTL 9.06e-01 -0.00986 0.0832 0.329 cDC L2
ENSG00000060688 SNRNP40 -611533 sc-eQTL 7.09e-03 0.202 0.0742 0.323 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 1.95e-01 0.109 0.0839 0.323 cMono_IL1B L2
ENSG00000134644 PUM1 -380736 sc-eQTL 4.44e-01 0.0436 0.0569 0.323 cMono_IL1B L2
ENSG00000162511 LAPTM5 -72519 sc-eQTL 3.51e-01 -0.0467 0.0499 0.323 cMono_IL1B L2
ENSG00000162512 SDC3 -223503 sc-eQTL 6.05e-01 -0.0488 0.0942 0.323 cMono_IL1B L2
ENSG00000162517 PEF1 -959641 sc-eQTL 6.61e-01 0.0338 0.0769 0.323 cMono_IL1B L2
ENSG00000168528 SERINC2 -724310 sc-eQTL 6.50e-01 0.0433 0.0953 0.323 cMono_IL1B L2
ENSG00000284543 LINC01226 -820971 sc-eQTL 6.27e-01 -0.041 0.0843 0.323 cMono_IL1B L2
ENSG00000287510 AL137857.1 -46438 sc-eQTL 9.17e-01 0.00824 0.0786 0.323 cMono_IL1B L2
ENSG00000060688 SNRNP40 -611533 sc-eQTL 4.07e-01 0.0661 0.0797 0.323 cMono_S100A L2
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 5.62e-01 0.0548 0.0942 0.323 cMono_S100A L2
ENSG00000134644 PUM1 -380736 sc-eQTL 7.55e-01 0.0213 0.0681 0.323 cMono_S100A L2
ENSG00000162511 LAPTM5 -72519 sc-eQTL 6.82e-01 0.0215 0.0524 0.323 cMono_S100A L2
ENSG00000162512 SDC3 -223503 sc-eQTL 8.16e-01 0.0211 0.0905 0.323 cMono_S100A L2
ENSG00000162517 PEF1 -959641 sc-eQTL 6.19e-01 -0.0407 0.0816 0.323 cMono_S100A L2
ENSG00000168528 SERINC2 -724310 sc-eQTL 7.57e-01 0.0296 0.0958 0.323 cMono_S100A L2
ENSG00000284543 LINC01226 -820971 sc-eQTL 5.64e-01 -0.045 0.0777 0.323 cMono_S100A L2
ENSG00000287510 AL137857.1 -46438 sc-eQTL 6.04e-01 -0.0406 0.0781 0.323 cMono_S100A L2
ENSG00000060688 SNRNP40 -611533 sc-eQTL 6.48e-01 -0.0528 0.115 0.336 gdT L2
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 8.73e-01 -0.0159 0.0992 0.336 gdT L2
ENSG00000134644 PUM1 -380736 sc-eQTL 9.06e-01 -0.0121 0.102 0.336 gdT L2
ENSG00000162511 LAPTM5 -72519 sc-eQTL 3.32e-01 0.108 0.111 0.336 gdT L2
ENSG00000162517 PEF1 -959641 sc-eQTL 5.71e-01 0.0577 0.102 0.336 gdT L2
ENSG00000186056 MATN1-AS1 -33249 sc-eQTL 4.67e-01 -0.0746 0.102 0.336 gdT L2
ENSG00000287510 AL137857.1 -46438 sc-eQTL 9.92e-01 0.000974 0.0994 0.336 gdT L2
ENSG00000060688 SNRNP40 -611533 sc-eQTL 2.89e-01 -0.0947 0.089 0.32 intMono L2
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 3.23e-01 -0.0948 0.0957 0.32 intMono L2
ENSG00000134644 PUM1 -380736 sc-eQTL 8.55e-01 0.0149 0.0814 0.32 intMono L2
ENSG00000162511 LAPTM5 -72519 sc-eQTL 7.15e-01 0.0234 0.0639 0.32 intMono L2
ENSG00000162512 SDC3 -223503 sc-eQTL 2.05e-01 -0.111 0.0871 0.32 intMono L2
ENSG00000162517 PEF1 -959641 sc-eQTL 6.88e-02 0.167 0.0911 0.32 intMono L2
ENSG00000168528 SERINC2 -724310 sc-eQTL 7.59e-01 0.0281 0.0915 0.32 intMono L2
ENSG00000284543 LINC01226 -820971 sc-eQTL 7.11e-01 0.0322 0.0867 0.32 intMono L2
ENSG00000287510 AL137857.1 -46438 sc-eQTL 3.31e-01 0.0843 0.0866 0.32 intMono L2
ENSG00000060688 SNRNP40 -611533 sc-eQTL 1.55e-01 -0.117 0.0821 0.324 ncMono L2
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 4.82e-01 0.0619 0.0878 0.324 ncMono L2
ENSG00000134644 PUM1 -380736 sc-eQTL 9.00e-01 -0.00906 0.0719 0.324 ncMono L2
ENSG00000162511 LAPTM5 -72519 sc-eQTL 8.78e-01 -0.01 0.0653 0.324 ncMono L2
ENSG00000162512 SDC3 -223503 sc-eQTL 1.09e-01 -0.117 0.0727 0.324 ncMono L2
ENSG00000162517 PEF1 -959641 sc-eQTL 2.25e-01 0.102 0.0836 0.324 ncMono L2
ENSG00000168528 SERINC2 -724310 sc-eQTL 6.49e-01 0.0364 0.0798 0.324 ncMono L2
ENSG00000284543 LINC01226 -820971 sc-eQTL 6.83e-01 0.0326 0.0797 0.324 ncMono L2
ENSG00000287510 AL137857.1 -46438 sc-eQTL 7.94e-01 0.0216 0.0827 0.324 ncMono L2
ENSG00000060688 SNRNP40 -611533 sc-eQTL 1.69e-01 -0.128 0.0927 0.311 pDC L2
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 9.76e-01 0.00309 0.102 0.311 pDC L2
ENSG00000134644 PUM1 -380736 sc-eQTL 5.31e-01 0.0532 0.0847 0.311 pDC L2
ENSG00000162511 LAPTM5 -72519 sc-eQTL 6.76e-01 0.0331 0.0788 0.311 pDC L2
ENSG00000162517 PEF1 -959641 sc-eQTL 7.54e-01 -0.0321 0.102 0.311 pDC L2
ENSG00000168528 SERINC2 -724310 sc-eQTL 8.25e-01 0.0211 0.0956 0.311 pDC L2
ENSG00000284543 LINC01226 -820971 sc-eQTL 4.13e-01 -0.0609 0.0741 0.311 pDC L2
ENSG00000287510 AL137857.1 -46438 sc-eQTL 6.87e-01 -0.0353 0.0873 0.311 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -611533 sc-eQTL 3.57e-01 -0.0864 0.0935 0.323 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 4.54e-01 0.0584 0.0779 0.323 B_Memory LOneK1K
ENSG00000134644 PUM1 -380736 sc-eQTL 7.41e-01 0.0229 0.0691 0.323 B_Memory LOneK1K
ENSG00000162510 MATN1 -38330 sc-eQTL 5.55e-01 -0.0466 0.0787 0.323 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -72519 sc-eQTL 2.13e-01 0.0616 0.0493 0.323 B_Memory LOneK1K
ENSG00000162517 PEF1 -959641 sc-eQTL 5.93e-01 -0.0438 0.0819 0.323 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -33249 sc-eQTL 7.66e-01 0.0195 0.0654 0.323 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -46438 sc-eQTL 5.60e-01 0.0416 0.0713 0.323 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -611533 sc-eQTL 7.40e-01 0.0281 0.0846 0.323 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 3.23e-01 -0.0662 0.0668 0.323 B_Naive LOneK1K
ENSG00000134644 PUM1 -380736 sc-eQTL 9.09e-01 0.00725 0.0633 0.323 B_Naive LOneK1K
ENSG00000162510 MATN1 -38330 sc-eQTL 5.36e-01 -0.0378 0.0609 0.323 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -72519 sc-eQTL 1.57e-01 0.0607 0.0427 0.323 B_Naive LOneK1K
ENSG00000162517 PEF1 -959641 sc-eQTL 3.29e-02 0.166 0.0775 0.323 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -33249 sc-eQTL 9.01e-01 -0.00689 0.0554 0.323 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -46438 sc-eQTL 8.49e-02 0.113 0.0654 0.323 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -611533 sc-eQTL 5.85e-02 0.135 0.0711 0.323 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 1.94e-01 0.106 0.0809 0.323 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -380736 sc-eQTL 3.70e-01 0.0465 0.0517 0.323 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -72519 sc-eQTL 7.86e-01 -0.0124 0.0455 0.323 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -223503 sc-eQTL 9.11e-01 -0.0104 0.0929 0.323 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -959641 sc-eQTL 8.26e-01 -0.0144 0.0653 0.323 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -724310 sc-eQTL 7.38e-01 0.032 0.0955 0.323 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -820971 sc-eQTL 4.05e-01 -0.0652 0.0782 0.323 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -46438 sc-eQTL 9.98e-01 0.00019 0.0733 0.323 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -611533 sc-eQTL 2.53e-01 -0.0904 0.079 0.319 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 3.99e-01 -0.0731 0.0865 0.319 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -380736 sc-eQTL 6.56e-01 -0.0317 0.071 0.319 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -72519 sc-eQTL 7.19e-01 -0.0205 0.0568 0.319 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -223503 sc-eQTL 5.57e-02 -0.158 0.0822 0.319 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -959641 sc-eQTL 9.55e-02 0.125 0.0749 0.319 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -724310 sc-eQTL 9.52e-01 0.00515 0.086 0.319 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -820971 sc-eQTL 7.17e-01 0.0296 0.0816 0.319 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -46438 sc-eQTL 9.29e-01 -0.00724 0.0818 0.319 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -611533 sc-eQTL 3.80e-02 0.184 0.0884 0.321 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -611727 sc-eQTL 1.02e-01 -0.0994 0.0606 0.321 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -380736 sc-eQTL 6.78e-01 0.0278 0.0668 0.321 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -72519 sc-eQTL 7.69e-01 -0.0219 0.0746 0.321 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -959641 sc-eQTL 8.11e-01 -0.0136 0.0567 0.321 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -33249 sc-eQTL 7.79e-01 0.0242 0.0861 0.321 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -46438 sc-eQTL 5.78e-01 0.0414 0.0743 0.321 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162511 LAPTM5 -72519 eQTL 0.0109 -0.0258 0.0101 0.0 0.0 0.365
ENSG00000162517 PEF1 -959641 eQTL 0.00295 0.0448 0.015 0.0 0.0026 0.365
ENSG00000284543 LINC01226 -821026 eQTL 0.039 -0.0664 0.0321 0.0 0.0 0.365

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina