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Genes within 1Mb (chr1:30683152:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -613636 sc-eQTL 4.01e-01 0.0655 0.0779 0.628 B L1
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 3.84e-01 -0.0544 0.0624 0.628 B L1
ENSG00000134644 PUM1 -382839 sc-eQTL 1.33e-01 -0.0786 0.0522 0.628 B L1
ENSG00000162510 MATN1 -40433 sc-eQTL 2.35e-01 -0.0654 0.055 0.628 B L1
ENSG00000162511 LAPTM5 -74622 sc-eQTL 3.34e-01 0.0417 0.0431 0.628 B L1
ENSG00000162517 PEF1 -961744 sc-eQTL 5.18e-01 0.0421 0.0651 0.628 B L1
ENSG00000186056 MATN1-AS1 -35352 sc-eQTL 3.73e-01 0.0451 0.0505 0.628 B L1
ENSG00000287510 AL137857.1 -48541 sc-eQTL 3.95e-01 0.051 0.0598 0.628 B L1
ENSG00000060688 SNRNP40 -613636 sc-eQTL 9.84e-01 -0.00138 0.0678 0.628 CD4T L1
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 5.59e-01 0.031 0.0529 0.628 CD4T L1
ENSG00000134644 PUM1 -382839 sc-eQTL 6.70e-01 -0.0201 0.0472 0.628 CD4T L1
ENSG00000162511 LAPTM5 -74622 sc-eQTL 2.97e-02 0.113 0.0517 0.628 CD4T L1
ENSG00000162517 PEF1 -961744 sc-eQTL 6.84e-01 -0.0223 0.0546 0.628 CD4T L1
ENSG00000186056 MATN1-AS1 -35352 sc-eQTL 3.71e-01 0.0418 0.0467 0.628 CD4T L1
ENSG00000287510 AL137857.1 -48541 sc-eQTL 8.93e-01 -0.00756 0.056 0.628 CD4T L1
ENSG00000060688 SNRNP40 -613636 sc-eQTL 5.13e-01 0.0595 0.0907 0.628 CD8T L1
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 5.38e-01 -0.0372 0.0604 0.628 CD8T L1
ENSG00000134644 PUM1 -382839 sc-eQTL 3.80e-01 0.0467 0.0531 0.628 CD8T L1
ENSG00000162511 LAPTM5 -74622 sc-eQTL 2.65e-01 0.0576 0.0515 0.628 CD8T L1
ENSG00000162517 PEF1 -961744 sc-eQTL 7.66e-01 -0.019 0.0636 0.628 CD8T L1
ENSG00000186056 MATN1-AS1 -35352 sc-eQTL 9.29e-01 -0.00542 0.0606 0.628 CD8T L1
ENSG00000287510 AL137857.1 -48541 sc-eQTL 8.43e-01 0.0151 0.0761 0.628 CD8T L1
ENSG00000060688 SNRNP40 -613636 sc-eQTL 2.43e-01 -0.0953 0.0814 0.635 DC L1
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 1.78e-01 -0.13 0.0962 0.635 DC L1
ENSG00000134644 PUM1 -382839 sc-eQTL 3.58e-02 -0.158 0.0749 0.635 DC L1
ENSG00000162511 LAPTM5 -74622 sc-eQTL 1.35e-01 0.0807 0.0538 0.635 DC L1
ENSG00000162517 PEF1 -961744 sc-eQTL 3.58e-01 0.0806 0.0875 0.635 DC L1
ENSG00000168528 SERINC2 -726413 sc-eQTL 4.35e-01 0.0697 0.089 0.635 DC L1
ENSG00000284543 LINC01226 -823074 sc-eQTL 5.57e-01 0.0347 0.059 0.635 DC L1
ENSG00000287510 AL137857.1 -48541 sc-eQTL 8.32e-01 -0.0182 0.0855 0.635 DC L1
ENSG00000060688 SNRNP40 -613636 sc-eQTL 9.67e-01 0.00256 0.0616 0.628 Mono L1
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 9.59e-01 0.00398 0.0763 0.628 Mono L1
ENSG00000134644 PUM1 -382839 sc-eQTL 2.57e-01 0.0554 0.0488 0.628 Mono L1
ENSG00000162511 LAPTM5 -74622 sc-eQTL 5.73e-01 0.0254 0.045 0.628 Mono L1
ENSG00000162512 SDC3 -225606 sc-eQTL 4.70e-01 -0.0625 0.0864 0.628 Mono L1
ENSG00000162517 PEF1 -961744 sc-eQTL 8.25e-01 0.0134 0.0607 0.628 Mono L1
ENSG00000168528 SERINC2 -726413 sc-eQTL 9.33e-01 0.00777 0.0928 0.628 Mono L1
ENSG00000284543 LINC01226 -823074 sc-eQTL 8.43e-01 -0.0162 0.0817 0.628 Mono L1
ENSG00000287510 AL137857.1 -48541 sc-eQTL 9.93e-01 0.000655 0.0715 0.628 Mono L1
ENSG00000060688 SNRNP40 -613636 sc-eQTL 2.51e-02 0.19 0.0841 0.627 NK L1
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 3.10e-02 -0.125 0.0576 0.627 NK L1
ENSG00000134644 PUM1 -382839 sc-eQTL 7.68e-01 -0.018 0.0611 0.627 NK L1
ENSG00000162511 LAPTM5 -74622 sc-eQTL 7.85e-02 0.123 0.0698 0.627 NK L1
ENSG00000162517 PEF1 -961744 sc-eQTL 3.28e-01 0.0502 0.0512 0.627 NK L1
ENSG00000186056 MATN1-AS1 -35352 sc-eQTL 6.41e-01 0.0369 0.079 0.627 NK L1
ENSG00000287510 AL137857.1 -48541 sc-eQTL 5.29e-01 0.0459 0.0729 0.627 NK L1
ENSG00000060688 SNRNP40 -613636 sc-eQTL 1.68e-01 0.0872 0.063 0.628 Other_T L1
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 5.72e-01 -0.0382 0.0676 0.628 Other_T L1
ENSG00000134644 PUM1 -382839 sc-eQTL 4.72e-01 -0.0438 0.0607 0.628 Other_T L1
ENSG00000162511 LAPTM5 -74622 sc-eQTL 6.34e-03 0.135 0.0489 0.628 Other_T L1
ENSG00000162517 PEF1 -961744 sc-eQTL 9.96e-01 0.000296 0.0665 0.628 Other_T L1
ENSG00000186056 MATN1-AS1 -35352 sc-eQTL 2.31e-01 0.0976 0.0813 0.628 Other_T L1
ENSG00000287510 AL137857.1 -48541 sc-eQTL 1.94e-01 -0.11 0.0846 0.628 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -613636 sc-eQTL 3.83e-01 -0.0917 0.105 0.64 B_Activated L2
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 4.33e-01 0.0831 0.106 0.64 B_Activated L2
ENSG00000134644 PUM1 -382839 sc-eQTL 2.55e-01 -0.112 0.0981 0.64 B_Activated L2
ENSG00000162510 MATN1 -40433 sc-eQTL 2.82e-01 -0.0926 0.0858 0.64 B_Activated L2
ENSG00000162511 LAPTM5 -74622 sc-eQTL 5.28e-01 0.0379 0.06 0.64 B_Activated L2
ENSG00000162517 PEF1 -961744 sc-eQTL 1.59e-01 0.144 0.102 0.64 B_Activated L2
ENSG00000186056 MATN1-AS1 -35352 sc-eQTL 6.13e-01 0.0491 0.0968 0.64 B_Activated L2
ENSG00000287510 AL137857.1 -48541 sc-eQTL 8.89e-01 0.012 0.0857 0.64 B_Activated L2
ENSG00000060688 SNRNP40 -613636 sc-eQTL 8.57e-02 -0.166 0.096 0.629 B_Intermediate L2
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 5.83e-01 -0.0443 0.0805 0.629 B_Intermediate L2
ENSG00000134644 PUM1 -382839 sc-eQTL 9.97e-01 -0.000257 0.076 0.629 B_Intermediate L2
ENSG00000162510 MATN1 -40433 sc-eQTL 6.69e-01 -0.0338 0.079 0.629 B_Intermediate L2
ENSG00000162511 LAPTM5 -74622 sc-eQTL 4.18e-01 0.0393 0.0485 0.629 B_Intermediate L2
ENSG00000162517 PEF1 -961744 sc-eQTL 6.71e-01 0.0383 0.0901 0.629 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -35352 sc-eQTL 3.46e-01 0.0641 0.068 0.629 B_Intermediate L2
ENSG00000287510 AL137857.1 -48541 sc-eQTL 6.34e-01 0.0363 0.0762 0.629 B_Intermediate L2
ENSG00000060688 SNRNP40 -613636 sc-eQTL 8.66e-01 0.0164 0.0972 0.627 B_Memory L2
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 9.81e-01 -0.00217 0.0895 0.627 B_Memory L2
ENSG00000134644 PUM1 -382839 sc-eQTL 7.52e-01 0.0247 0.0779 0.627 B_Memory L2
ENSG00000162510 MATN1 -40433 sc-eQTL 9.70e-01 0.00277 0.0745 0.627 B_Memory L2
ENSG00000162511 LAPTM5 -74622 sc-eQTL 4.63e-01 0.0485 0.066 0.627 B_Memory L2
ENSG00000162517 PEF1 -961744 sc-eQTL 2.08e-01 0.111 0.0879 0.627 B_Memory L2
ENSG00000186056 MATN1-AS1 -35352 sc-eQTL 4.65e-01 -0.0553 0.0755 0.627 B_Memory L2
ENSG00000287510 AL137857.1 -48541 sc-eQTL 5.13e-01 -0.058 0.0885 0.627 B_Memory L2
ENSG00000060688 SNRNP40 -613636 sc-eQTL 6.54e-03 0.226 0.0824 0.628 B_Naive1 L2
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 7.77e-01 0.0205 0.0724 0.628 B_Naive1 L2
ENSG00000134644 PUM1 -382839 sc-eQTL 9.68e-01 -0.00257 0.0638 0.628 B_Naive1 L2
ENSG00000162510 MATN1 -40433 sc-eQTL 3.32e-01 -0.0628 0.0646 0.628 B_Naive1 L2
ENSG00000162511 LAPTM5 -74622 sc-eQTL 4.93e-01 0.0297 0.0432 0.628 B_Naive1 L2
ENSG00000162517 PEF1 -961744 sc-eQTL 3.15e-01 0.0767 0.0761 0.628 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -35352 sc-eQTL 5.59e-01 0.0332 0.0568 0.628 B_Naive1 L2
ENSG00000287510 AL137857.1 -48541 sc-eQTL 9.21e-02 0.118 0.0697 0.628 B_Naive1 L2
ENSG00000060688 SNRNP40 -613636 sc-eQTL 5.12e-01 -0.0592 0.0902 0.627 B_Naive2 L2
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 2.21e-02 -0.17 0.0736 0.627 B_Naive2 L2
ENSG00000134644 PUM1 -382839 sc-eQTL 1.25e-03 -0.233 0.0711 0.627 B_Naive2 L2
ENSG00000162510 MATN1 -40433 sc-eQTL 2.70e-01 -0.0773 0.0698 0.627 B_Naive2 L2
ENSG00000162511 LAPTM5 -74622 sc-eQTL 7.45e-01 0.0155 0.0475 0.627 B_Naive2 L2
ENSG00000162517 PEF1 -961744 sc-eQTL 2.63e-01 -0.0968 0.0862 0.627 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -35352 sc-eQTL 2.06e-01 0.0875 0.069 0.627 B_Naive2 L2
ENSG00000287510 AL137857.1 -48541 sc-eQTL 9.74e-01 -0.00242 0.0748 0.627 B_Naive2 L2
ENSG00000060688 SNRNP40 -613636 sc-eQTL 5.77e-01 -0.0501 0.0896 0.634 CD4_CTL L2
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 5.21e-01 -0.0566 0.0881 0.634 CD4_CTL L2
ENSG00000134644 PUM1 -382839 sc-eQTL 1.16e-01 0.136 0.0859 0.634 CD4_CTL L2
ENSG00000162511 LAPTM5 -74622 sc-eQTL 8.42e-02 0.133 0.0765 0.634 CD4_CTL L2
ENSG00000162517 PEF1 -961744 sc-eQTL 7.81e-01 -0.022 0.079 0.634 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -35352 sc-eQTL 3.58e-01 0.0775 0.0841 0.634 CD4_CTL L2
ENSG00000287510 AL137857.1 -48541 sc-eQTL 1.82e-01 0.0992 0.074 0.634 CD4_CTL L2
ENSG00000060688 SNRNP40 -613636 sc-eQTL 9.02e-01 0.00877 0.0709 0.628 CD4_Naive L2
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 4.99e-01 0.0425 0.0628 0.628 CD4_Naive L2
ENSG00000134644 PUM1 -382839 sc-eQTL 7.03e-01 -0.0192 0.0502 0.628 CD4_Naive L2
ENSG00000162511 LAPTM5 -74622 sc-eQTL 3.10e-02 0.116 0.0532 0.628 CD4_Naive L2
ENSG00000162517 PEF1 -961744 sc-eQTL 5.98e-01 -0.0311 0.0589 0.628 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -35352 sc-eQTL 6.09e-01 0.028 0.0546 0.628 CD4_Naive L2
ENSG00000287510 AL137857.1 -48541 sc-eQTL 8.91e-01 0.00862 0.0627 0.628 CD4_Naive L2
ENSG00000060688 SNRNP40 -613636 sc-eQTL 7.31e-01 -0.0305 0.0885 0.628 CD4_TCM L2
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 5.95e-01 -0.038 0.0713 0.628 CD4_TCM L2
ENSG00000134644 PUM1 -382839 sc-eQTL 7.89e-01 0.0169 0.0631 0.628 CD4_TCM L2
ENSG00000162511 LAPTM5 -74622 sc-eQTL 2.08e-01 0.0659 0.0522 0.628 CD4_TCM L2
ENSG00000162517 PEF1 -961744 sc-eQTL 9.09e-01 -0.00807 0.0702 0.628 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -35352 sc-eQTL 3.87e-01 0.0575 0.0663 0.628 CD4_TCM L2
ENSG00000287510 AL137857.1 -48541 sc-eQTL 7.19e-01 -0.0267 0.074 0.628 CD4_TCM L2
ENSG00000060688 SNRNP40 -613636 sc-eQTL 3.11e-01 0.0905 0.0891 0.628 CD4_TEM L2
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 6.27e-01 0.0415 0.0851 0.628 CD4_TEM L2
ENSG00000134644 PUM1 -382839 sc-eQTL 4.91e-01 0.0488 0.0708 0.628 CD4_TEM L2
ENSG00000162511 LAPTM5 -74622 sc-eQTL 3.03e-02 0.155 0.0709 0.628 CD4_TEM L2
ENSG00000162517 PEF1 -961744 sc-eQTL 9.86e-01 0.00141 0.0803 0.628 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -35352 sc-eQTL 6.23e-01 -0.0413 0.0838 0.628 CD4_TEM L2
ENSG00000287510 AL137857.1 -48541 sc-eQTL 4.66e-01 -0.0602 0.0826 0.628 CD4_TEM L2
ENSG00000060688 SNRNP40 -613636 sc-eQTL 5.87e-01 -0.0524 0.0964 0.628 CD8_CTL L2
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 4.72e-01 0.0532 0.0739 0.628 CD8_CTL L2
ENSG00000134644 PUM1 -382839 sc-eQTL 1.64e-01 0.0998 0.0715 0.628 CD8_CTL L2
ENSG00000162511 LAPTM5 -74622 sc-eQTL 8.16e-02 0.138 0.079 0.628 CD8_CTL L2
ENSG00000162517 PEF1 -961744 sc-eQTL 2.98e-01 0.0721 0.0691 0.628 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -35352 sc-eQTL 8.66e-01 0.0141 0.0836 0.628 CD8_CTL L2
ENSG00000287510 AL137857.1 -48541 sc-eQTL 6.64e-01 -0.0342 0.0786 0.628 CD8_CTL L2
ENSG00000060688 SNRNP40 -613636 sc-eQTL 4.88e-01 0.0617 0.0888 0.628 CD8_Naive L2
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 1.59e-01 -0.108 0.0763 0.628 CD8_Naive L2
ENSG00000134644 PUM1 -382839 sc-eQTL 7.24e-01 0.0218 0.0617 0.628 CD8_Naive L2
ENSG00000162511 LAPTM5 -74622 sc-eQTL 1.78e-01 0.0795 0.0588 0.628 CD8_Naive L2
ENSG00000162517 PEF1 -961744 sc-eQTL 5.22e-01 -0.0526 0.0821 0.628 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -35352 sc-eQTL 4.96e-01 0.0502 0.0737 0.628 CD8_Naive L2
ENSG00000287510 AL137857.1 -48541 sc-eQTL 8.89e-01 0.0113 0.0803 0.628 CD8_Naive L2
ENSG00000060688 SNRNP40 -613636 sc-eQTL 8.96e-01 0.0132 0.101 0.632 CD8_TCM L2
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 2.51e-01 0.106 0.092 0.632 CD8_TCM L2
ENSG00000134644 PUM1 -382839 sc-eQTL 4.28e-01 0.0689 0.0867 0.632 CD8_TCM L2
ENSG00000162511 LAPTM5 -74622 sc-eQTL 1.45e-01 0.132 0.0904 0.632 CD8_TCM L2
ENSG00000162517 PEF1 -961744 sc-eQTL 1.77e-01 -0.125 0.0924 0.632 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -35352 sc-eQTL 2.33e-01 -0.1 0.0838 0.632 CD8_TCM L2
ENSG00000287510 AL137857.1 -48541 sc-eQTL 9.95e-01 0.000547 0.085 0.632 CD8_TCM L2
ENSG00000060688 SNRNP40 -613636 sc-eQTL 9.80e-01 -0.00229 0.0918 0.616 CD8_TEM L2
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 3.23e-01 -0.0871 0.0878 0.616 CD8_TEM L2
ENSG00000134644 PUM1 -382839 sc-eQTL 9.02e-01 0.011 0.09 0.616 CD8_TEM L2
ENSG00000162511 LAPTM5 -74622 sc-eQTL 8.44e-01 0.0166 0.0846 0.616 CD8_TEM L2
ENSG00000162517 PEF1 -961744 sc-eQTL 3.45e-01 -0.0752 0.0794 0.616 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -35352 sc-eQTL 3.87e-01 -0.0759 0.0876 0.616 CD8_TEM L2
ENSG00000287510 AL137857.1 -48541 sc-eQTL 8.37e-01 0.0163 0.0794 0.616 CD8_TEM L2
ENSG00000060688 SNRNP40 -613636 sc-eQTL 5.05e-01 0.0622 0.0932 0.63 MAIT L2
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 9.60e-01 -0.00415 0.0827 0.63 MAIT L2
ENSG00000134644 PUM1 -382839 sc-eQTL 7.43e-01 0.026 0.0792 0.63 MAIT L2
ENSG00000162511 LAPTM5 -74622 sc-eQTL 1.03e-02 0.191 0.0736 0.63 MAIT L2
ENSG00000162517 PEF1 -961744 sc-eQTL 8.98e-01 -0.0105 0.0821 0.63 MAIT L2
ENSG00000186056 MATN1-AS1 -35352 sc-eQTL 6.31e-01 0.04 0.0832 0.63 MAIT L2
ENSG00000287510 AL137857.1 -48541 sc-eQTL 4.73e-02 -0.17 0.085 0.63 MAIT L2
ENSG00000060688 SNRNP40 -613636 sc-eQTL 2.70e-01 0.105 0.0946 0.631 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 1.75e-01 -0.109 0.0798 0.631 NK_CD56bright L2
ENSG00000134644 PUM1 -382839 sc-eQTL 6.06e-01 0.0435 0.0842 0.631 NK_CD56bright L2
ENSG00000162511 LAPTM5 -74622 sc-eQTL 4.40e-02 0.167 0.0822 0.631 NK_CD56bright L2
ENSG00000162517 PEF1 -961744 sc-eQTL 9.49e-01 0.00516 0.0807 0.631 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -35352 sc-eQTL 1.22e-02 -0.208 0.0822 0.631 NK_CD56bright L2
ENSG00000287510 AL137857.1 -48541 sc-eQTL 5.10e-01 -0.0542 0.0822 0.631 NK_CD56bright L2
ENSG00000060688 SNRNP40 -613636 sc-eQTL 5.76e-01 0.0504 0.0901 0.627 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 2.71e-02 -0.147 0.0659 0.627 NK_CD56dim L2
ENSG00000134644 PUM1 -382839 sc-eQTL 9.79e-01 0.00184 0.0684 0.627 NK_CD56dim L2
ENSG00000162511 LAPTM5 -74622 sc-eQTL 3.52e-01 0.0678 0.0728 0.627 NK_CD56dim L2
ENSG00000162517 PEF1 -961744 sc-eQTL 6.61e-01 -0.0285 0.0649 0.627 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -35352 sc-eQTL 5.04e-01 0.0611 0.0913 0.627 NK_CD56dim L2
ENSG00000287510 AL137857.1 -48541 sc-eQTL 1.08e-01 0.121 0.0749 0.627 NK_CD56dim L2
ENSG00000060688 SNRNP40 -613636 sc-eQTL 6.29e-01 -0.0466 0.0962 0.63 NK_HLA L2
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 9.88e-01 -0.00128 0.086 0.63 NK_HLA L2
ENSG00000134644 PUM1 -382839 sc-eQTL 2.06e-01 -0.106 0.0834 0.63 NK_HLA L2
ENSG00000162511 LAPTM5 -74622 sc-eQTL 6.72e-02 0.146 0.0793 0.63 NK_HLA L2
ENSG00000162517 PEF1 -961744 sc-eQTL 3.91e-01 -0.0773 0.0899 0.63 NK_HLA L2
ENSG00000186056 MATN1-AS1 -35352 sc-eQTL 4.06e-01 0.0706 0.0849 0.63 NK_HLA L2
ENSG00000287510 AL137857.1 -48541 sc-eQTL 1.87e-01 0.108 0.0819 0.63 NK_HLA L2
ENSG00000060688 SNRNP40 -613636 sc-eQTL 3.34e-01 0.0849 0.0877 0.627 NK_cytokine L2
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 4.79e-01 -0.0486 0.0685 0.627 NK_cytokine L2
ENSG00000134644 PUM1 -382839 sc-eQTL 6.90e-01 0.0296 0.0741 0.627 NK_cytokine L2
ENSG00000162511 LAPTM5 -74622 sc-eQTL 9.14e-02 0.137 0.0811 0.627 NK_cytokine L2
ENSG00000162517 PEF1 -961744 sc-eQTL 1.83e-01 0.0924 0.0693 0.627 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -35352 sc-eQTL 8.43e-01 0.0171 0.0865 0.627 NK_cytokine L2
ENSG00000287510 AL137857.1 -48541 sc-eQTL 8.53e-01 -0.0149 0.0805 0.627 NK_cytokine L2
ENSG00000060688 SNRNP40 -613636 sc-eQTL 1.40e-01 0.153 0.103 0.622 PB L2
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 3.06e-01 -0.123 0.12 0.622 PB L2
ENSG00000134644 PUM1 -382839 sc-eQTL 9.42e-01 0.00768 0.105 0.622 PB L2
ENSG00000162510 MATN1 -40433 sc-eQTL 9.26e-01 0.00911 0.0976 0.622 PB L2
ENSG00000162511 LAPTM5 -74622 sc-eQTL 8.45e-01 0.0137 0.0697 0.622 PB L2
ENSG00000162517 PEF1 -961744 sc-eQTL 1.82e-01 0.143 0.107 0.622 PB L2
ENSG00000186056 MATN1-AS1 -35352 sc-eQTL 2.75e-01 0.104 0.0949 0.622 PB L2
ENSG00000287510 AL137857.1 -48541 sc-eQTL 2.18e-01 -0.125 0.101 0.622 PB L2
ENSG00000060688 SNRNP40 -613636 sc-eQTL 4.97e-01 0.0473 0.0694 0.628 Pro_T L2
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 8.25e-01 -0.0195 0.0883 0.628 Pro_T L2
ENSG00000134644 PUM1 -382839 sc-eQTL 4.20e-01 -0.0664 0.0822 0.628 Pro_T L2
ENSG00000162511 LAPTM5 -74622 sc-eQTL 8.07e-01 0.0144 0.0591 0.628 Pro_T L2
ENSG00000162517 PEF1 -961744 sc-eQTL 5.05e-01 0.0578 0.0866 0.628 Pro_T L2
ENSG00000186056 MATN1-AS1 -35352 sc-eQTL 2.53e-01 -0.0943 0.0823 0.628 Pro_T L2
ENSG00000287510 AL137857.1 -48541 sc-eQTL 2.53e-01 -0.0867 0.0757 0.628 Pro_T L2
ENSG00000060688 SNRNP40 -613636 sc-eQTL 8.28e-01 -0.0196 0.0902 0.628 Treg L2
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 3.78e-01 0.077 0.0871 0.628 Treg L2
ENSG00000134644 PUM1 -382839 sc-eQTL 8.67e-01 0.0117 0.0698 0.628 Treg L2
ENSG00000162511 LAPTM5 -74622 sc-eQTL 8.37e-02 0.138 0.0794 0.628 Treg L2
ENSG00000162517 PEF1 -961744 sc-eQTL 8.65e-01 0.0147 0.0864 0.628 Treg L2
ENSG00000186056 MATN1-AS1 -35352 sc-eQTL 7.15e-01 0.0298 0.0815 0.628 Treg L2
ENSG00000287510 AL137857.1 -48541 sc-eQTL 4.35e-01 0.0636 0.0813 0.628 Treg L2
ENSG00000060688 SNRNP40 -613636 sc-eQTL 6.13e-01 0.049 0.0969 0.646 cDC L2
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 4.90e-01 0.0726 0.105 0.646 cDC L2
ENSG00000134644 PUM1 -382839 sc-eQTL 9.95e-02 -0.148 0.0895 0.646 cDC L2
ENSG00000162511 LAPTM5 -74622 sc-eQTL 8.81e-02 0.108 0.0627 0.646 cDC L2
ENSG00000162517 PEF1 -961744 sc-eQTL 1.64e-01 0.127 0.0911 0.646 cDC L2
ENSG00000168528 SERINC2 -726413 sc-eQTL 9.23e-02 0.136 0.0805 0.646 cDC L2
ENSG00000284543 LINC01226 -823074 sc-eQTL 9.28e-01 -0.00719 0.0798 0.646 cDC L2
ENSG00000287510 AL137857.1 -48541 sc-eQTL 8.42e-01 0.0172 0.0858 0.646 cDC L2
ENSG00000060688 SNRNP40 -613636 sc-eQTL 4.43e-01 0.0571 0.0742 0.628 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 8.06e-01 0.0204 0.0828 0.628 cMono_IL1B L2
ENSG00000134644 PUM1 -382839 sc-eQTL 1.02e-01 0.0914 0.0557 0.628 cMono_IL1B L2
ENSG00000162511 LAPTM5 -74622 sc-eQTL 6.85e-01 -0.02 0.0492 0.628 cMono_IL1B L2
ENSG00000162512 SDC3 -225606 sc-eQTL 8.79e-01 -0.0142 0.0927 0.628 cMono_IL1B L2
ENSG00000162517 PEF1 -961744 sc-eQTL 6.11e-01 0.0385 0.0757 0.628 cMono_IL1B L2
ENSG00000168528 SERINC2 -726413 sc-eQTL 6.26e-01 0.0458 0.0938 0.628 cMono_IL1B L2
ENSG00000284543 LINC01226 -823074 sc-eQTL 4.38e-01 -0.0643 0.0829 0.628 cMono_IL1B L2
ENSG00000287510 AL137857.1 -48541 sc-eQTL 5.67e-01 -0.0443 0.0773 0.628 cMono_IL1B L2
ENSG00000060688 SNRNP40 -613636 sc-eQTL 9.06e-01 0.00927 0.0785 0.628 cMono_S100A L2
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 7.94e-01 0.0243 0.0927 0.628 cMono_S100A L2
ENSG00000134644 PUM1 -382839 sc-eQTL 5.77e-01 -0.0374 0.067 0.628 cMono_S100A L2
ENSG00000162511 LAPTM5 -74622 sc-eQTL 4.67e-01 0.0375 0.0515 0.628 cMono_S100A L2
ENSG00000162512 SDC3 -225606 sc-eQTL 5.22e-01 -0.0571 0.0889 0.628 cMono_S100A L2
ENSG00000162517 PEF1 -961744 sc-eQTL 3.96e-01 -0.0682 0.0802 0.628 cMono_S100A L2
ENSG00000168528 SERINC2 -726413 sc-eQTL 9.29e-01 0.0084 0.0942 0.628 cMono_S100A L2
ENSG00000284543 LINC01226 -823074 sc-eQTL 4.73e-01 -0.055 0.0765 0.628 cMono_S100A L2
ENSG00000287510 AL137857.1 -48541 sc-eQTL 2.78e-01 -0.0833 0.0767 0.628 cMono_S100A L2
ENSG00000060688 SNRNP40 -613636 sc-eQTL 5.52e-01 0.068 0.114 0.642 gdT L2
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 9.35e-02 0.164 0.0972 0.642 gdT L2
ENSG00000134644 PUM1 -382839 sc-eQTL 9.97e-01 0.000352 0.101 0.642 gdT L2
ENSG00000162511 LAPTM5 -74622 sc-eQTL 6.26e-01 -0.0538 0.11 0.642 gdT L2
ENSG00000162517 PEF1 -961744 sc-eQTL 8.19e-01 0.023 0.101 0.642 gdT L2
ENSG00000186056 MATN1-AS1 -35352 sc-eQTL 7.10e-01 -0.0378 0.101 0.642 gdT L2
ENSG00000287510 AL137857.1 -48541 sc-eQTL 9.70e-01 -0.00376 0.0983 0.642 gdT L2
ENSG00000060688 SNRNP40 -613636 sc-eQTL 5.96e-01 0.0464 0.0874 0.631 intMono L2
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 8.49e-01 0.0179 0.094 0.631 intMono L2
ENSG00000134644 PUM1 -382839 sc-eQTL 4.33e-01 -0.0625 0.0797 0.631 intMono L2
ENSG00000162511 LAPTM5 -74622 sc-eQTL 5.23e-01 0.04 0.0625 0.631 intMono L2
ENSG00000162512 SDC3 -225606 sc-eQTL 2.46e-01 -0.0993 0.0854 0.631 intMono L2
ENSG00000162517 PEF1 -961744 sc-eQTL 1.13e-01 0.142 0.0895 0.631 intMono L2
ENSG00000168528 SERINC2 -726413 sc-eQTL 4.01e-01 0.0754 0.0896 0.631 intMono L2
ENSG00000284543 LINC01226 -823074 sc-eQTL 9.21e-01 -0.00845 0.085 0.631 intMono L2
ENSG00000287510 AL137857.1 -48541 sc-eQTL 9.75e-01 0.00265 0.085 0.631 intMono L2
ENSG00000060688 SNRNP40 -613636 sc-eQTL 3.92e-01 0.0699 0.0815 0.631 ncMono L2
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 9.02e-01 -0.0107 0.087 0.631 ncMono L2
ENSG00000134644 PUM1 -382839 sc-eQTL 3.84e-01 0.062 0.071 0.631 ncMono L2
ENSG00000162511 LAPTM5 -74622 sc-eQTL 2.28e-01 0.0779 0.0643 0.631 ncMono L2
ENSG00000162512 SDC3 -225606 sc-eQTL 1.96e-01 -0.0936 0.0721 0.631 ncMono L2
ENSG00000162517 PEF1 -961744 sc-eQTL 3.04e-01 0.0854 0.0828 0.631 ncMono L2
ENSG00000168528 SERINC2 -726413 sc-eQTL 6.31e-01 0.038 0.079 0.631 ncMono L2
ENSG00000284543 LINC01226 -823074 sc-eQTL 2.93e-01 0.083 0.0787 0.631 ncMono L2
ENSG00000287510 AL137857.1 -48541 sc-eQTL 7.29e-01 0.0284 0.0818 0.631 ncMono L2
ENSG00000060688 SNRNP40 -613636 sc-eQTL 7.03e-02 -0.167 0.0917 0.638 pDC L2
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 3.53e-01 -0.0946 0.101 0.638 pDC L2
ENSG00000134644 PUM1 -382839 sc-eQTL 8.59e-01 -0.015 0.0844 0.638 pDC L2
ENSG00000162511 LAPTM5 -74622 sc-eQTL 7.62e-01 -0.0238 0.0784 0.638 pDC L2
ENSG00000162517 PEF1 -961744 sc-eQTL 2.54e-01 0.116 0.101 0.638 pDC L2
ENSG00000168528 SERINC2 -726413 sc-eQTL 3.56e-01 -0.0878 0.0949 0.638 pDC L2
ENSG00000284543 LINC01226 -823074 sc-eQTL 1.44e-01 -0.108 0.0733 0.638 pDC L2
ENSG00000287510 AL137857.1 -48541 sc-eQTL 4.13e-01 -0.0711 0.0867 0.638 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -613636 sc-eQTL 4.74e-01 -0.0668 0.0932 0.628 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 9.12e-01 -0.00858 0.0777 0.628 B_Memory LOneK1K
ENSG00000134644 PUM1 -382839 sc-eQTL 6.99e-01 -0.0266 0.0688 0.628 B_Memory LOneK1K
ENSG00000162510 MATN1 -40433 sc-eQTL 4.64e-01 -0.0575 0.0784 0.628 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -74622 sc-eQTL 2.36e-01 0.0584 0.0491 0.628 B_Memory LOneK1K
ENSG00000162517 PEF1 -961744 sc-eQTL 8.05e-01 0.0202 0.0817 0.628 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -35352 sc-eQTL 4.21e-01 0.0525 0.0651 0.628 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -48541 sc-eQTL 4.96e-01 0.0484 0.071 0.628 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -613636 sc-eQTL 6.12e-02 0.153 0.081 0.628 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 4.60e-01 -0.0478 0.0645 0.628 B_Naive LOneK1K
ENSG00000134644 PUM1 -382839 sc-eQTL 1.50e-01 -0.088 0.0608 0.628 B_Naive LOneK1K
ENSG00000162510 MATN1 -40433 sc-eQTL 2.69e-01 -0.0651 0.0587 0.628 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -74622 sc-eQTL 4.77e-01 0.0295 0.0414 0.628 B_Naive LOneK1K
ENSG00000162517 PEF1 -961744 sc-eQTL 9.01e-01 0.00939 0.0756 0.628 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -35352 sc-eQTL 4.48e-01 0.0406 0.0534 0.628 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -48541 sc-eQTL 2.39e-01 0.0748 0.0633 0.628 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -613636 sc-eQTL 8.20e-01 -0.016 0.0703 0.628 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 8.82e-01 0.0118 0.0796 0.628 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -382839 sc-eQTL 3.12e-01 0.0513 0.0506 0.628 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -74622 sc-eQTL 7.90e-01 0.0119 0.0446 0.628 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -225606 sc-eQTL 7.17e-01 -0.033 0.091 0.628 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -961744 sc-eQTL 6.16e-01 -0.0321 0.064 0.628 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -726413 sc-eQTL 9.67e-01 0.00383 0.0936 0.628 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -823074 sc-eQTL 5.29e-01 -0.0483 0.0767 0.628 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -48541 sc-eQTL 6.86e-01 -0.0291 0.0718 0.628 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -613636 sc-eQTL 1.40e-01 0.114 0.0771 0.627 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 3.69e-01 -0.0762 0.0846 0.627 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -382839 sc-eQTL 9.66e-01 -0.00295 0.0695 0.627 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -74622 sc-eQTL 5.80e-01 0.0307 0.0555 0.627 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -225606 sc-eQTL 2.31e-01 -0.0972 0.0809 0.627 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -961744 sc-eQTL 3.74e-01 0.0656 0.0736 0.627 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -726413 sc-eQTL 6.40e-01 0.0395 0.0841 0.627 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -823074 sc-eQTL 7.28e-01 0.0278 0.0799 0.627 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -48541 sc-eQTL 9.30e-01 0.00706 0.08 0.627 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -613636 sc-eQTL 5.73e-02 0.162 0.0848 0.627 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -613830 sc-eQTL 6.94e-02 -0.106 0.058 0.627 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -382839 sc-eQTL 9.11e-01 -0.00714 0.064 0.627 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -74622 sc-eQTL 1.33e-01 0.107 0.0712 0.627 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -961744 sc-eQTL 7.17e-01 0.0197 0.0543 0.627 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -35352 sc-eQTL 3.39e-01 0.0789 0.0824 0.627 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -48541 sc-eQTL 4.82e-01 0.0501 0.0711 0.627 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162511 LAPTM5 -74622 eQTL 0.000598 -0.0359 0.0104 0.0 0.0 0.337
ENSG00000162517 PEF1 -961744 eQTL 0.0246 0.0351 0.0156 0.0 0.0 0.337

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162511 LAPTM5 -74622 8.09e-06 5.15e-06 7.66e-07 2.42e-06 1.38e-06 1.92e-06 5.37e-06 9.96e-07 4.94e-06 2.42e-06 5.21e-06 3.33e-06 7.38e-06 2.22e-06 1.39e-06 3.83e-06 1.78e-06 4e-06 1.33e-06 1.02e-06 3e-06 4.95e-06 4.64e-06 1.71e-06 6.64e-06 1.74e-06 2.35e-06 1.79e-06 4.23e-06 4.43e-06 2.7e-06 4.56e-07 7.92e-07 1.82e-06 2.07e-06 8.53e-07 9.21e-07 4.73e-07 1.3e-06 3.63e-07 2.4e-07 6.65e-06 8.79e-07 1.99e-07 5.95e-07 3.52e-07 8.08e-07 2.07e-07 2.69e-07
ENSG00000284543 \N -823129 2.67e-07 1.11e-07 3.69e-08 1.79e-07 9.65e-08 9.87e-08 1.41e-07 5.49e-08 1.41e-07 4.38e-08 1.6e-07 7.75e-08 1.26e-07 6.21e-08 5.4e-08 7.26e-08 4.63e-08 1.14e-07 5.19e-08 4.03e-08 1.04e-07 1.28e-07 1.26e-07 4.54e-08 1.31e-07 1.19e-07 1.12e-07 8.7e-08 1.02e-07 1.1e-07 9.58e-08 3.76e-08 2.91e-08 8.25e-08 9.15e-08 3.9e-08 4.67e-08 9.25e-08 8.3e-08 3.03e-08 3.82e-08 1.31e-07 4.52e-08 2.33e-08 7.26e-08 1.74e-08 1.24e-07 4.26e-09 4.91e-08