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Genes within 1Mb (chr1:30654444:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -642344 sc-eQTL 5.52e-01 -0.0458 0.0769 0.342 B L1
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 5.26e-01 -0.0391 0.0615 0.342 B L1
ENSG00000134644 PUM1 -411547 sc-eQTL 5.57e-01 0.0304 0.0516 0.342 B L1
ENSG00000162510 MATN1 -69141 sc-eQTL 8.12e-01 -0.0129 0.0543 0.342 B L1
ENSG00000162511 LAPTM5 -103330 sc-eQTL 1.53e-01 0.0607 0.0423 0.342 B L1
ENSG00000162517 PEF1 -990452 sc-eQTL 3.97e-01 0.0544 0.0641 0.342 B L1
ENSG00000186056 MATN1-AS1 -64060 sc-eQTL 8.15e-01 0.0117 0.0499 0.342 B L1
ENSG00000287510 AL137857.1 -77249 sc-eQTL 1.43e-02 0.144 0.0582 0.342 B L1
ENSG00000060688 SNRNP40 -642344 sc-eQTL 1.24e-01 0.105 0.0681 0.342 CD4T L1
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 9.48e-02 0.0892 0.0532 0.342 CD4T L1
ENSG00000134644 PUM1 -411547 sc-eQTL 2.33e-01 -0.0568 0.0475 0.342 CD4T L1
ENSG00000162511 LAPTM5 -103330 sc-eQTL 5.38e-01 -0.0326 0.0527 0.342 CD4T L1
ENSG00000162517 PEF1 -990452 sc-eQTL 4.72e-01 -0.0397 0.0551 0.342 CD4T L1
ENSG00000186056 MATN1-AS1 -64060 sc-eQTL 7.99e-01 0.012 0.0472 0.342 CD4T L1
ENSG00000287510 AL137857.1 -77249 sc-eQTL 8.96e-01 0.00737 0.0566 0.342 CD4T L1
ENSG00000060688 SNRNP40 -642344 sc-eQTL 9.26e-01 0.00833 0.0898 0.342 CD8T L1
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 8.74e-01 -0.00946 0.0598 0.342 CD8T L1
ENSG00000134644 PUM1 -411547 sc-eQTL 9.72e-01 -0.00185 0.0526 0.342 CD8T L1
ENSG00000162511 LAPTM5 -103330 sc-eQTL 6.62e-01 -0.0224 0.0511 0.342 CD8T L1
ENSG00000162517 PEF1 -990452 sc-eQTL 6.98e-01 -0.0244 0.0629 0.342 CD8T L1
ENSG00000186056 MATN1-AS1 -64060 sc-eQTL 5.53e-01 -0.0356 0.0598 0.342 CD8T L1
ENSG00000287510 AL137857.1 -77249 sc-eQTL 6.44e-01 0.0348 0.0752 0.342 CD8T L1
ENSG00000060688 SNRNP40 -642344 sc-eQTL 8.97e-01 0.0102 0.0787 0.338 DC L1
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 8.98e-02 -0.158 0.0926 0.338 DC L1
ENSG00000134644 PUM1 -411547 sc-eQTL 4.20e-01 -0.0589 0.0729 0.338 DC L1
ENSG00000162511 LAPTM5 -103330 sc-eQTL 1.94e-01 0.0677 0.0519 0.338 DC L1
ENSG00000162517 PEF1 -990452 sc-eQTL 1.65e-01 -0.117 0.0842 0.338 DC L1
ENSG00000168528 SERINC2 -755121 sc-eQTL 6.24e-01 0.0422 0.086 0.338 DC L1
ENSG00000284543 LINC01226 -851782 sc-eQTL 9.99e-01 -9.18e-05 0.057 0.338 DC L1
ENSG00000287510 AL137857.1 -77249 sc-eQTL 3.91e-01 -0.0708 0.0823 0.338 DC L1
ENSG00000060688 SNRNP40 -642344 sc-eQTL 2.14e-01 0.0754 0.0605 0.342 Mono L1
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 2.82e-01 0.0811 0.0751 0.342 Mono L1
ENSG00000134644 PUM1 -411547 sc-eQTL 7.66e-01 -0.0144 0.0483 0.342 Mono L1
ENSG00000162511 LAPTM5 -103330 sc-eQTL 6.48e-01 -0.0203 0.0444 0.342 Mono L1
ENSG00000162512 SDC3 -254314 sc-eQTL 2.83e-01 -0.0915 0.0851 0.342 Mono L1
ENSG00000162517 PEF1 -990452 sc-eQTL 8.62e-01 -0.0104 0.0599 0.342 Mono L1
ENSG00000168528 SERINC2 -755121 sc-eQTL 7.81e-01 -0.0255 0.0916 0.342 Mono L1
ENSG00000284543 LINC01226 -851782 sc-eQTL 6.21e-01 -0.0399 0.0806 0.342 Mono L1
ENSG00000287510 AL137857.1 -77249 sc-eQTL 6.81e-01 -0.029 0.0705 0.342 Mono L1
ENSG00000060688 SNRNP40 -642344 sc-eQTL 1.11e-01 0.137 0.0857 0.339 NK L1
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 9.86e-02 -0.0972 0.0586 0.339 NK L1
ENSG00000134644 PUM1 -411547 sc-eQTL 6.24e-01 0.0304 0.0618 0.339 NK L1
ENSG00000162511 LAPTM5 -103330 sc-eQTL 9.35e-01 0.00584 0.0712 0.339 NK L1
ENSG00000162517 PEF1 -990452 sc-eQTL 8.82e-01 -0.00775 0.052 0.339 NK L1
ENSG00000186056 MATN1-AS1 -64060 sc-eQTL 8.67e-01 -0.0134 0.08 0.339 NK L1
ENSG00000287510 AL137857.1 -77249 sc-eQTL 6.81e-01 0.0304 0.0739 0.339 NK L1
ENSG00000060688 SNRNP40 -642344 sc-eQTL 8.77e-01 -0.00977 0.063 0.342 Other_T L1
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 9.82e-01 -0.00153 0.0673 0.342 Other_T L1
ENSG00000134644 PUM1 -411547 sc-eQTL 9.02e-01 -0.00748 0.0605 0.342 Other_T L1
ENSG00000162511 LAPTM5 -103330 sc-eQTL 1.38e-01 0.0734 0.0493 0.342 Other_T L1
ENSG00000162517 PEF1 -990452 sc-eQTL 7.95e-01 0.0172 0.0662 0.342 Other_T L1
ENSG00000186056 MATN1-AS1 -64060 sc-eQTL 3.24e-01 0.0801 0.081 0.342 Other_T L1
ENSG00000287510 AL137857.1 -77249 sc-eQTL 7.16e-01 0.0308 0.0846 0.342 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -642344 sc-eQTL 2.25e-01 0.121 0.0995 0.349 B_Activated L2
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 5.71e-01 0.0571 0.101 0.349 B_Activated L2
ENSG00000134644 PUM1 -411547 sc-eQTL 8.34e-01 -0.0196 0.0937 0.349 B_Activated L2
ENSG00000162510 MATN1 -69141 sc-eQTL 3.69e-01 -0.0735 0.0817 0.349 B_Activated L2
ENSG00000162511 LAPTM5 -103330 sc-eQTL 3.82e-01 0.0499 0.057 0.349 B_Activated L2
ENSG00000162517 PEF1 -990452 sc-eQTL 3.16e-01 0.0974 0.0969 0.349 B_Activated L2
ENSG00000186056 MATN1-AS1 -64060 sc-eQTL 3.35e-01 0.0889 0.0919 0.349 B_Activated L2
ENSG00000287510 AL137857.1 -77249 sc-eQTL 3.03e-01 0.0839 0.0813 0.349 B_Activated L2
ENSG00000060688 SNRNP40 -642344 sc-eQTL 8.93e-01 -0.0126 0.0938 0.341 B_Intermediate L2
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 7.58e-01 0.0241 0.0781 0.341 B_Intermediate L2
ENSG00000134644 PUM1 -411547 sc-eQTL 4.36e-01 -0.0574 0.0736 0.341 B_Intermediate L2
ENSG00000162510 MATN1 -69141 sc-eQTL 2.32e-01 0.0917 0.0765 0.341 B_Intermediate L2
ENSG00000162511 LAPTM5 -103330 sc-eQTL 1.36e-01 0.0702 0.0469 0.341 B_Intermediate L2
ENSG00000162517 PEF1 -990452 sc-eQTL 7.49e-01 0.028 0.0874 0.341 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -64060 sc-eQTL 4.87e-01 -0.0459 0.066 0.341 B_Intermediate L2
ENSG00000287510 AL137857.1 -77249 sc-eQTL 9.74e-01 -0.00241 0.074 0.341 B_Intermediate L2
ENSG00000060688 SNRNP40 -642344 sc-eQTL 3.50e-01 -0.0872 0.0931 0.341 B_Memory L2
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 2.18e-01 0.106 0.0856 0.341 B_Memory L2
ENSG00000134644 PUM1 -411547 sc-eQTL 3.51e-01 0.0697 0.0746 0.341 B_Memory L2
ENSG00000162510 MATN1 -69141 sc-eQTL 6.10e-01 -0.0366 0.0715 0.341 B_Memory L2
ENSG00000162511 LAPTM5 -103330 sc-eQTL 6.18e-01 0.0317 0.0634 0.341 B_Memory L2
ENSG00000162517 PEF1 -990452 sc-eQTL 2.72e-01 -0.0929 0.0845 0.341 B_Memory L2
ENSG00000186056 MATN1-AS1 -64060 sc-eQTL 6.46e-01 0.0333 0.0725 0.341 B_Memory L2
ENSG00000287510 AL137857.1 -77249 sc-eQTL 2.98e-01 0.0884 0.0848 0.341 B_Memory L2
ENSG00000060688 SNRNP40 -642344 sc-eQTL 6.89e-01 0.0337 0.0841 0.342 B_Naive1 L2
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 2.53e-01 0.083 0.0724 0.342 B_Naive1 L2
ENSG00000134644 PUM1 -411547 sc-eQTL 4.75e-01 0.0458 0.064 0.342 B_Naive1 L2
ENSG00000162510 MATN1 -69141 sc-eQTL 3.47e-01 -0.0612 0.0649 0.342 B_Naive1 L2
ENSG00000162511 LAPTM5 -103330 sc-eQTL 1.19e-01 0.0677 0.0432 0.342 B_Naive1 L2
ENSG00000162517 PEF1 -990452 sc-eQTL 3.12e-01 0.0774 0.0764 0.342 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -64060 sc-eQTL 8.96e-01 0.00748 0.057 0.342 B_Naive1 L2
ENSG00000287510 AL137857.1 -77249 sc-eQTL 3.12e-02 0.151 0.0697 0.342 B_Naive1 L2
ENSG00000060688 SNRNP40 -642344 sc-eQTL 6.57e-01 -0.0404 0.0909 0.339 B_Naive2 L2
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 4.57e-02 -0.149 0.0743 0.339 B_Naive2 L2
ENSG00000134644 PUM1 -411547 sc-eQTL 1.33e-01 -0.11 0.0731 0.339 B_Naive2 L2
ENSG00000162510 MATN1 -69141 sc-eQTL 1.09e-01 0.113 0.0701 0.339 B_Naive2 L2
ENSG00000162511 LAPTM5 -103330 sc-eQTL 2.31e-01 0.0573 0.0477 0.339 B_Naive2 L2
ENSG00000162517 PEF1 -990452 sc-eQTL 7.33e-02 0.156 0.0865 0.339 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -64060 sc-eQTL 8.74e-01 -0.0111 0.0697 0.339 B_Naive2 L2
ENSG00000287510 AL137857.1 -77249 sc-eQTL 8.82e-02 0.128 0.0748 0.339 B_Naive2 L2
ENSG00000060688 SNRNP40 -642344 sc-eQTL 5.13e-01 -0.0573 0.0875 0.348 CD4_CTL L2
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 7.00e-01 -0.0333 0.0861 0.348 CD4_CTL L2
ENSG00000134644 PUM1 -411547 sc-eQTL 5.87e-01 0.046 0.0844 0.348 CD4_CTL L2
ENSG00000162511 LAPTM5 -103330 sc-eQTL 7.51e-01 -0.0239 0.0753 0.348 CD4_CTL L2
ENSG00000162517 PEF1 -990452 sc-eQTL 1.49e-01 -0.111 0.0768 0.348 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -64060 sc-eQTL 7.54e-02 0.146 0.0817 0.348 CD4_CTL L2
ENSG00000287510 AL137857.1 -77249 sc-eQTL 5.75e-01 0.0408 0.0726 0.348 CD4_CTL L2
ENSG00000060688 SNRNP40 -642344 sc-eQTL 1.99e-01 0.0918 0.0713 0.342 CD4_Naive L2
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 4.51e-01 0.0478 0.0634 0.342 CD4_Naive L2
ENSG00000134644 PUM1 -411547 sc-eQTL 1.93e-01 -0.0659 0.0505 0.342 CD4_Naive L2
ENSG00000162511 LAPTM5 -103330 sc-eQTL 9.97e-01 0.000227 0.0543 0.342 CD4_Naive L2
ENSG00000162517 PEF1 -990452 sc-eQTL 6.53e-01 0.0268 0.0595 0.342 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -64060 sc-eQTL 7.89e-01 0.0147 0.0551 0.342 CD4_Naive L2
ENSG00000287510 AL137857.1 -77249 sc-eQTL 1.76e-01 0.0854 0.063 0.342 CD4_Naive L2
ENSG00000060688 SNRNP40 -642344 sc-eQTL 2.89e-01 0.0958 0.0901 0.342 CD4_TCM L2
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 3.53e-01 0.0677 0.0727 0.342 CD4_TCM L2
ENSG00000134644 PUM1 -411547 sc-eQTL 8.11e-01 0.0154 0.0645 0.342 CD4_TCM L2
ENSG00000162511 LAPTM5 -103330 sc-eQTL 2.95e-02 -0.116 0.0529 0.342 CD4_TCM L2
ENSG00000162517 PEF1 -990452 sc-eQTL 9.86e-01 -0.00124 0.0717 0.342 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -64060 sc-eQTL 5.01e-01 -0.0457 0.0678 0.342 CD4_TCM L2
ENSG00000287510 AL137857.1 -77249 sc-eQTL 9.45e-02 -0.126 0.0751 0.342 CD4_TCM L2
ENSG00000060688 SNRNP40 -642344 sc-eQTL 1.79e-01 0.12 0.0891 0.342 CD4_TEM L2
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 2.31e-01 0.102 0.085 0.342 CD4_TEM L2
ENSG00000134644 PUM1 -411547 sc-eQTL 6.92e-01 -0.0282 0.071 0.342 CD4_TEM L2
ENSG00000162511 LAPTM5 -103330 sc-eQTL 8.03e-01 0.0179 0.0718 0.342 CD4_TEM L2
ENSG00000162517 PEF1 -990452 sc-eQTL 2.92e-01 -0.0847 0.0802 0.342 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -64060 sc-eQTL 2.13e-01 -0.105 0.0837 0.342 CD4_TEM L2
ENSG00000287510 AL137857.1 -77249 sc-eQTL 3.64e-01 -0.0752 0.0826 0.342 CD4_TEM L2
ENSG00000060688 SNRNP40 -642344 sc-eQTL 4.07e-01 -0.0799 0.0961 0.342 CD8_CTL L2
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 5.42e-01 0.0451 0.0738 0.342 CD8_CTL L2
ENSG00000134644 PUM1 -411547 sc-eQTL 3.27e-01 0.0704 0.0715 0.342 CD8_CTL L2
ENSG00000162511 LAPTM5 -103330 sc-eQTL 9.41e-01 -0.00588 0.0794 0.342 CD8_CTL L2
ENSG00000162517 PEF1 -990452 sc-eQTL 8.70e-01 -0.0113 0.0691 0.342 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -64060 sc-eQTL 5.91e-01 -0.0449 0.0834 0.342 CD8_CTL L2
ENSG00000287510 AL137857.1 -77249 sc-eQTL 8.99e-01 -0.01 0.0785 0.342 CD8_CTL L2
ENSG00000060688 SNRNP40 -642344 sc-eQTL 6.20e-01 0.0448 0.09 0.342 CD8_Naive L2
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 1.42e-01 -0.114 0.0773 0.342 CD8_Naive L2
ENSG00000134644 PUM1 -411547 sc-eQTL 2.67e-01 -0.0694 0.0623 0.342 CD8_Naive L2
ENSG00000162511 LAPTM5 -103330 sc-eQTL 9.21e-01 0.00595 0.0599 0.342 CD8_Naive L2
ENSG00000162517 PEF1 -990452 sc-eQTL 6.27e-01 0.0405 0.0832 0.342 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -64060 sc-eQTL 1.18e-01 0.117 0.0743 0.342 CD8_Naive L2
ENSG00000287510 AL137857.1 -77249 sc-eQTL 4.98e-01 0.0552 0.0813 0.342 CD8_Naive L2
ENSG00000060688 SNRNP40 -642344 sc-eQTL 4.80e-01 -0.071 0.1 0.343 CD8_TCM L2
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 6.99e-01 0.0356 0.0919 0.343 CD8_TCM L2
ENSG00000134644 PUM1 -411547 sc-eQTL 4.10e-01 -0.0713 0.0863 0.343 CD8_TCM L2
ENSG00000162511 LAPTM5 -103330 sc-eQTL 8.41e-01 -0.0181 0.0905 0.343 CD8_TCM L2
ENSG00000162517 PEF1 -990452 sc-eQTL 8.30e-02 -0.16 0.0917 0.343 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -64060 sc-eQTL 1.82e-01 -0.112 0.0834 0.343 CD8_TCM L2
ENSG00000287510 AL137857.1 -77249 sc-eQTL 9.45e-01 -0.00583 0.0846 0.343 CD8_TCM L2
ENSG00000060688 SNRNP40 -642344 sc-eQTL 9.54e-01 0.00525 0.0915 0.338 CD8_TEM L2
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 9.55e-01 0.005 0.0877 0.338 CD8_TEM L2
ENSG00000134644 PUM1 -411547 sc-eQTL 6.03e-01 -0.0467 0.0896 0.338 CD8_TEM L2
ENSG00000162511 LAPTM5 -103330 sc-eQTL 3.07e-01 0.0861 0.0841 0.338 CD8_TEM L2
ENSG00000162517 PEF1 -990452 sc-eQTL 2.59e-01 -0.0896 0.0791 0.338 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -64060 sc-eQTL 2.47e-01 -0.101 0.0872 0.338 CD8_TEM L2
ENSG00000287510 AL137857.1 -77249 sc-eQTL 3.54e-01 0.0734 0.079 0.338 CD8_TEM L2
ENSG00000060688 SNRNP40 -642344 sc-eQTL 8.26e-01 -0.0204 0.0925 0.344 MAIT L2
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 3.54e-01 0.076 0.0818 0.344 MAIT L2
ENSG00000134644 PUM1 -411547 sc-eQTL 5.74e-01 0.0442 0.0785 0.344 MAIT L2
ENSG00000162511 LAPTM5 -103330 sc-eQTL 1.01e-01 0.121 0.0736 0.344 MAIT L2
ENSG00000162517 PEF1 -990452 sc-eQTL 8.14e-01 -0.0192 0.0814 0.344 MAIT L2
ENSG00000186056 MATN1-AS1 -64060 sc-eQTL 6.78e-01 0.0343 0.0825 0.344 MAIT L2
ENSG00000287510 AL137857.1 -77249 sc-eQTL 9.75e-01 0.00269 0.085 0.344 MAIT L2
ENSG00000060688 SNRNP40 -642344 sc-eQTL 4.27e-01 0.0754 0.0947 0.342 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 6.39e-01 -0.0376 0.0801 0.342 NK_CD56bright L2
ENSG00000134644 PUM1 -411547 sc-eQTL 4.38e-02 0.169 0.0833 0.342 NK_CD56bright L2
ENSG00000162511 LAPTM5 -103330 sc-eQTL 5.32e-01 0.052 0.0829 0.342 NK_CD56bright L2
ENSG00000162517 PEF1 -990452 sc-eQTL 8.30e-01 -0.0173 0.0806 0.342 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -64060 sc-eQTL 5.74e-01 -0.047 0.0834 0.342 NK_CD56bright L2
ENSG00000287510 AL137857.1 -77249 sc-eQTL 3.75e-01 0.073 0.082 0.342 NK_CD56bright L2
ENSG00000060688 SNRNP40 -642344 sc-eQTL 9.58e-01 -0.00477 0.0911 0.341 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 5.32e-02 -0.13 0.0668 0.341 NK_CD56dim L2
ENSG00000134644 PUM1 -411547 sc-eQTL 9.95e-01 0.000408 0.0691 0.341 NK_CD56dim L2
ENSG00000162511 LAPTM5 -103330 sc-eQTL 6.78e-01 0.0306 0.0737 0.341 NK_CD56dim L2
ENSG00000162517 PEF1 -990452 sc-eQTL 8.06e-01 -0.0162 0.0656 0.341 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -64060 sc-eQTL 5.90e-01 -0.0498 0.0923 0.341 NK_CD56dim L2
ENSG00000287510 AL137857.1 -77249 sc-eQTL 4.78e-01 0.0541 0.0761 0.341 NK_CD56dim L2
ENSG00000060688 SNRNP40 -642344 sc-eQTL 9.78e-01 0.00259 0.0945 0.34 NK_HLA L2
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 4.22e-01 0.0677 0.0842 0.34 NK_HLA L2
ENSG00000134644 PUM1 -411547 sc-eQTL 8.30e-01 -0.0177 0.0822 0.34 NK_HLA L2
ENSG00000162511 LAPTM5 -103330 sc-eQTL 9.46e-01 0.00528 0.0784 0.34 NK_HLA L2
ENSG00000162517 PEF1 -990452 sc-eQTL 7.26e-01 0.031 0.0884 0.34 NK_HLA L2
ENSG00000186056 MATN1-AS1 -64060 sc-eQTL 5.19e-01 0.0539 0.0834 0.34 NK_HLA L2
ENSG00000287510 AL137857.1 -77249 sc-eQTL 3.00e-01 -0.0836 0.0805 0.34 NK_HLA L2
ENSG00000060688 SNRNP40 -642344 sc-eQTL 8.57e-02 0.152 0.0883 0.341 NK_cytokine L2
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 6.62e-01 -0.0303 0.0693 0.341 NK_cytokine L2
ENSG00000134644 PUM1 -411547 sc-eQTL 4.34e-01 -0.0588 0.0749 0.341 NK_cytokine L2
ENSG00000162511 LAPTM5 -103330 sc-eQTL 7.56e-01 0.0257 0.0826 0.341 NK_cytokine L2
ENSG00000162517 PEF1 -990452 sc-eQTL 3.92e-01 -0.0602 0.0703 0.341 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -64060 sc-eQTL 8.08e-01 0.0213 0.0875 0.341 NK_cytokine L2
ENSG00000287510 AL137857.1 -77249 sc-eQTL 5.21e-01 0.0523 0.0814 0.341 NK_cytokine L2
ENSG00000060688 SNRNP40 -642344 sc-eQTL 9.65e-01 -0.00419 0.0966 0.341 PB L2
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 3.32e-01 -0.109 0.112 0.341 PB L2
ENSG00000134644 PUM1 -411547 sc-eQTL 6.50e-01 -0.0443 0.0972 0.341 PB L2
ENSG00000162510 MATN1 -69141 sc-eQTL 6.63e-01 0.0396 0.0907 0.341 PB L2
ENSG00000162511 LAPTM5 -103330 sc-eQTL 8.81e-01 0.00972 0.0648 0.341 PB L2
ENSG00000162517 PEF1 -990452 sc-eQTL 3.50e-01 -0.0934 0.0994 0.341 PB L2
ENSG00000186056 MATN1-AS1 -64060 sc-eQTL 9.35e-01 0.00726 0.0887 0.341 PB L2
ENSG00000287510 AL137857.1 -77249 sc-eQTL 3.84e-01 0.0823 0.0941 0.341 PB L2
ENSG00000060688 SNRNP40 -642344 sc-eQTL 1.19e-01 -0.109 0.0698 0.341 Pro_T L2
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 7.75e-01 -0.0255 0.0891 0.341 Pro_T L2
ENSG00000134644 PUM1 -411547 sc-eQTL 1.99e-01 0.107 0.0828 0.341 Pro_T L2
ENSG00000162511 LAPTM5 -103330 sc-eQTL 1.91e-01 -0.0779 0.0594 0.341 Pro_T L2
ENSG00000162517 PEF1 -990452 sc-eQTL 8.43e-01 0.0173 0.0875 0.341 Pro_T L2
ENSG00000186056 MATN1-AS1 -64060 sc-eQTL 5.43e-01 -0.0507 0.0833 0.341 Pro_T L2
ENSG00000287510 AL137857.1 -77249 sc-eQTL 2.71e-01 -0.0845 0.0765 0.341 Pro_T L2
ENSG00000060688 SNRNP40 -642344 sc-eQTL 2.21e-01 -0.111 0.0902 0.342 Treg L2
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 3.52e-01 0.0816 0.0874 0.342 Treg L2
ENSG00000134644 PUM1 -411547 sc-eQTL 8.39e-01 0.0143 0.0701 0.342 Treg L2
ENSG00000162511 LAPTM5 -103330 sc-eQTL 7.83e-01 -0.0222 0.0803 0.342 Treg L2
ENSG00000162517 PEF1 -990452 sc-eQTL 4.43e-01 -0.0665 0.0866 0.342 Treg L2
ENSG00000186056 MATN1-AS1 -64060 sc-eQTL 8.73e-01 -0.0131 0.0818 0.342 Treg L2
ENSG00000287510 AL137857.1 -77249 sc-eQTL 1.56e-01 0.116 0.0813 0.342 Treg L2
ENSG00000060688 SNRNP40 -642344 sc-eQTL 5.12e-01 0.0594 0.0905 0.344 cDC L2
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 1.46e-01 -0.142 0.0976 0.344 cDC L2
ENSG00000134644 PUM1 -411547 sc-eQTL 7.64e-01 -0.0253 0.0843 0.344 cDC L2
ENSG00000162511 LAPTM5 -103330 sc-eQTL 3.55e-01 0.0546 0.059 0.344 cDC L2
ENSG00000162517 PEF1 -990452 sc-eQTL 5.19e-01 -0.0553 0.0855 0.344 cDC L2
ENSG00000168528 SERINC2 -755121 sc-eQTL 5.09e-01 0.0502 0.0758 0.344 cDC L2
ENSG00000284543 LINC01226 -851782 sc-eQTL 3.92e-01 0.0639 0.0744 0.344 cDC L2
ENSG00000287510 AL137857.1 -77249 sc-eQTL 8.61e-01 -0.014 0.0802 0.344 cDC L2
ENSG00000060688 SNRNP40 -642344 sc-eQTL 4.84e-03 0.203 0.0711 0.342 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 1.72e-01 0.11 0.0805 0.342 cMono_IL1B L2
ENSG00000134644 PUM1 -411547 sc-eQTL 5.32e-01 0.0342 0.0547 0.342 cMono_IL1B L2
ENSG00000162511 LAPTM5 -103330 sc-eQTL 5.66e-01 -0.0276 0.048 0.342 cMono_IL1B L2
ENSG00000162512 SDC3 -254314 sc-eQTL 9.29e-01 -0.00809 0.0905 0.342 cMono_IL1B L2
ENSG00000162517 PEF1 -990452 sc-eQTL 5.12e-01 0.0485 0.0739 0.342 cMono_IL1B L2
ENSG00000168528 SERINC2 -755121 sc-eQTL 8.25e-01 -0.0202 0.0916 0.342 cMono_IL1B L2
ENSG00000284543 LINC01226 -851782 sc-eQTL 9.40e-01 -0.00613 0.081 0.342 cMono_IL1B L2
ENSG00000287510 AL137857.1 -77249 sc-eQTL 9.23e-01 -0.00733 0.0755 0.342 cMono_IL1B L2
ENSG00000060688 SNRNP40 -642344 sc-eQTL 3.45e-01 0.0728 0.077 0.342 cMono_S100A L2
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 4.82e-01 0.0642 0.091 0.342 cMono_S100A L2
ENSG00000134644 PUM1 -411547 sc-eQTL 7.88e-01 0.0177 0.0659 0.342 cMono_S100A L2
ENSG00000162511 LAPTM5 -103330 sc-eQTL 8.03e-01 0.0126 0.0506 0.342 cMono_S100A L2
ENSG00000162512 SDC3 -254314 sc-eQTL 9.84e-01 0.00181 0.0875 0.342 cMono_S100A L2
ENSG00000162517 PEF1 -990452 sc-eQTL 3.68e-01 -0.0711 0.0788 0.342 cMono_S100A L2
ENSG00000168528 SERINC2 -755121 sc-eQTL 7.12e-01 -0.0342 0.0926 0.342 cMono_S100A L2
ENSG00000284543 LINC01226 -851782 sc-eQTL 7.15e-01 -0.0275 0.0752 0.342 cMono_S100A L2
ENSG00000287510 AL137857.1 -77249 sc-eQTL 4.88e-01 -0.0524 0.0754 0.342 cMono_S100A L2
ENSG00000060688 SNRNP40 -642344 sc-eQTL 9.74e-01 -0.0036 0.112 0.358 gdT L2
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 9.31e-01 0.00828 0.096 0.358 gdT L2
ENSG00000134644 PUM1 -411547 sc-eQTL 6.01e-01 0.0518 0.0989 0.358 gdT L2
ENSG00000162511 LAPTM5 -103330 sc-eQTL 9.03e-01 -0.0131 0.108 0.358 gdT L2
ENSG00000162517 PEF1 -990452 sc-eQTL 6.78e-01 0.0409 0.0984 0.358 gdT L2
ENSG00000186056 MATN1-AS1 -64060 sc-eQTL 5.04e-01 -0.0665 0.0991 0.358 gdT L2
ENSG00000287510 AL137857.1 -77249 sc-eQTL 8.19e-01 -0.022 0.0962 0.358 gdT L2
ENSG00000060688 SNRNP40 -642344 sc-eQTL 2.63e-01 -0.0966 0.0861 0.336 intMono L2
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 8.88e-01 -0.0131 0.0928 0.336 intMono L2
ENSG00000134644 PUM1 -411547 sc-eQTL 6.00e-01 -0.0413 0.0787 0.336 intMono L2
ENSG00000162511 LAPTM5 -103330 sc-eQTL 9.15e-01 -0.00659 0.0618 0.336 intMono L2
ENSG00000162512 SDC3 -254314 sc-eQTL 4.08e-01 -0.07 0.0845 0.336 intMono L2
ENSG00000162517 PEF1 -990452 sc-eQTL 2.39e-01 0.105 0.0886 0.336 intMono L2
ENSG00000168528 SERINC2 -755121 sc-eQTL 7.53e-01 -0.0279 0.0885 0.336 intMono L2
ENSG00000284543 LINC01226 -851782 sc-eQTL 9.71e-01 -0.00304 0.0839 0.336 intMono L2
ENSG00000287510 AL137857.1 -77249 sc-eQTL 2.32e-01 0.1 0.0836 0.336 intMono L2
ENSG00000060688 SNRNP40 -642344 sc-eQTL 2.25e-02 -0.181 0.0787 0.344 ncMono L2
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 3.62e-01 0.0776 0.0849 0.344 ncMono L2
ENSG00000134644 PUM1 -411547 sc-eQTL 6.69e-01 -0.0297 0.0695 0.344 ncMono L2
ENSG00000162511 LAPTM5 -103330 sc-eQTL 4.33e-01 -0.0496 0.063 0.344 ncMono L2
ENSG00000162512 SDC3 -254314 sc-eQTL 1.70e-01 -0.0969 0.0704 0.344 ncMono L2
ENSG00000162517 PEF1 -990452 sc-eQTL 6.64e-01 0.0353 0.0811 0.344 ncMono L2
ENSG00000168528 SERINC2 -755121 sc-eQTL 5.40e-01 -0.0474 0.0772 0.344 ncMono L2
ENSG00000284543 LINC01226 -851782 sc-eQTL 6.58e-01 0.0342 0.0771 0.344 ncMono L2
ENSG00000287510 AL137857.1 -77249 sc-eQTL 5.07e-01 0.0531 0.0799 0.344 ncMono L2
ENSG00000060688 SNRNP40 -642344 sc-eQTL 1.69e-01 -0.125 0.0903 0.333 pDC L2
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 6.91e-01 0.0397 0.0997 0.333 pDC L2
ENSG00000134644 PUM1 -411547 sc-eQTL 6.19e-01 0.0412 0.0826 0.333 pDC L2
ENSG00000162511 LAPTM5 -103330 sc-eQTL 8.58e-01 0.0138 0.0769 0.333 pDC L2
ENSG00000162517 PEF1 -990452 sc-eQTL 4.22e-01 -0.0802 0.0996 0.333 pDC L2
ENSG00000168528 SERINC2 -755121 sc-eQTL 7.72e-01 0.027 0.0932 0.333 pDC L2
ENSG00000284543 LINC01226 -851782 sc-eQTL 3.93e-01 -0.0619 0.0722 0.333 pDC L2
ENSG00000287510 AL137857.1 -77249 sc-eQTL 9.56e-01 0.00466 0.0852 0.333 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -642344 sc-eQTL 7.48e-01 -0.0286 0.0886 0.342 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 5.95e-01 0.0392 0.0738 0.342 B_Memory LOneK1K
ENSG00000134644 PUM1 -411547 sc-eQTL 8.36e-01 0.0136 0.0654 0.342 B_Memory LOneK1K
ENSG00000162510 MATN1 -69141 sc-eQTL 7.64e-01 -0.0224 0.0746 0.342 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -103330 sc-eQTL 1.30e-01 0.0709 0.0466 0.342 B_Memory LOneK1K
ENSG00000162517 PEF1 -990452 sc-eQTL 2.21e-01 -0.0948 0.0773 0.342 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -64060 sc-eQTL 7.40e-01 0.0206 0.062 0.342 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -77249 sc-eQTL 5.75e-01 0.0379 0.0675 0.342 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -642344 sc-eQTL 8.37e-01 0.0168 0.0812 0.342 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 6.64e-01 -0.0279 0.0642 0.342 B_Naive LOneK1K
ENSG00000134644 PUM1 -411547 sc-eQTL 8.55e-01 0.0111 0.0607 0.342 B_Naive LOneK1K
ENSG00000162510 MATN1 -69141 sc-eQTL 8.14e-01 -0.0138 0.0585 0.342 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -103330 sc-eQTL 8.22e-02 0.0714 0.0409 0.342 B_Naive LOneK1K
ENSG00000162517 PEF1 -990452 sc-eQTL 5.91e-02 0.141 0.0745 0.342 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -64060 sc-eQTL 9.58e-01 -0.0028 0.0532 0.342 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -77249 sc-eQTL 7.53e-03 0.168 0.0621 0.342 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -642344 sc-eQTL 1.79e-02 0.163 0.0683 0.342 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 1.56e-01 0.111 0.078 0.342 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -411547 sc-eQTL 4.56e-01 0.0372 0.0499 0.342 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -103330 sc-eQTL 8.76e-01 0.00689 0.0439 0.342 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -254314 sc-eQTL 9.98e-01 -0.000233 0.0896 0.342 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -990452 sc-eQTL 7.48e-01 -0.0203 0.063 0.342 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -755121 sc-eQTL 7.74e-01 -0.0265 0.0922 0.342 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -851782 sc-eQTL 6.19e-01 -0.0377 0.0756 0.342 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -77249 sc-eQTL 7.31e-01 -0.0244 0.0708 0.342 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -642344 sc-eQTL 7.79e-02 -0.135 0.0761 0.336 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 9.93e-01 0.000713 0.0838 0.336 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -411547 sc-eQTL 1.92e-01 -0.0895 0.0684 0.336 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -103330 sc-eQTL 3.50e-01 -0.0514 0.0548 0.336 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -254314 sc-eQTL 1.40e-01 -0.118 0.0798 0.336 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -990452 sc-eQTL 3.98e-01 0.0616 0.0728 0.336 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -755121 sc-eQTL 4.87e-01 -0.0579 0.0831 0.336 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -851782 sc-eQTL 9.37e-01 -0.00623 0.079 0.336 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -77249 sc-eQTL 8.46e-01 0.0154 0.0791 0.336 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -642344 sc-eQTL 1.68e-01 0.119 0.086 0.341 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -642538 sc-eQTL 1.28e-01 -0.0898 0.0587 0.341 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -411547 sc-eQTL 9.65e-01 -0.00287 0.0647 0.341 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -103330 sc-eQTL 9.73e-01 -0.00241 0.0723 0.341 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -990452 sc-eQTL 6.30e-01 -0.0265 0.0549 0.341 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -64060 sc-eQTL 8.84e-01 0.0122 0.0834 0.341 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -77249 sc-eQTL 7.80e-01 0.0201 0.072 0.341 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000142910 TINAGL1 -922041 pQTL 0.0282 0.0348 0.0158 0.00118 0.0 0.359
ENSG00000284543 LINC01226 -851837 eQTL 0.031 -0.0699 0.0323 0.0 0.0 0.366

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina