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Genes within 1Mb (chr1:30650218:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -646570 sc-eQTL 2.20e-01 0.094 0.0765 0.44 B L1
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 3.63e-01 -0.0559 0.0613 0.44 B L1
ENSG00000134644 PUM1 -415773 sc-eQTL 6.26e-01 -0.0252 0.0515 0.44 B L1
ENSG00000162510 MATN1 -73367 sc-eQTL 6.40e-02 -0.1 0.0538 0.44 B L1
ENSG00000162511 LAPTM5 -107556 sc-eQTL 5.23e-01 0.0271 0.0424 0.44 B L1
ENSG00000162517 PEF1 -994678 sc-eQTL 6.35e-01 0.0305 0.064 0.44 B L1
ENSG00000186056 MATN1-AS1 -68286 sc-eQTL 8.33e-01 0.0105 0.0497 0.44 B L1
ENSG00000287510 AL137857.1 -81475 sc-eQTL 2.30e-01 0.0706 0.0587 0.44 B L1
ENSG00000060688 SNRNP40 -646570 sc-eQTL 9.63e-01 -0.00313 0.0677 0.44 CD4T L1
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 7.37e-01 -0.0178 0.0529 0.44 CD4T L1
ENSG00000134644 PUM1 -415773 sc-eQTL 7.11e-01 0.0174 0.0471 0.44 CD4T L1
ENSG00000162511 LAPTM5 -107556 sc-eQTL 3.15e-01 0.0525 0.0521 0.44 CD4T L1
ENSG00000162517 PEF1 -994678 sc-eQTL 8.63e-01 -0.0094 0.0546 0.44 CD4T L1
ENSG00000186056 MATN1-AS1 -68286 sc-eQTL 4.71e-01 0.0337 0.0466 0.44 CD4T L1
ENSG00000287510 AL137857.1 -81475 sc-eQTL 9.43e-01 -0.00403 0.0559 0.44 CD4T L1
ENSG00000060688 SNRNP40 -646570 sc-eQTL 3.28e-01 0.0875 0.0892 0.44 CD8T L1
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 4.30e-01 -0.0469 0.0594 0.44 CD8T L1
ENSG00000134644 PUM1 -415773 sc-eQTL 6.06e-01 0.027 0.0523 0.44 CD8T L1
ENSG00000162511 LAPTM5 -107556 sc-eQTL 3.07e-01 0.052 0.0507 0.44 CD8T L1
ENSG00000162517 PEF1 -994678 sc-eQTL 2.55e-01 0.0713 0.0624 0.44 CD8T L1
ENSG00000186056 MATN1-AS1 -68286 sc-eQTL 7.89e-01 0.016 0.0596 0.44 CD8T L1
ENSG00000287510 AL137857.1 -81475 sc-eQTL 9.51e-01 0.00465 0.0749 0.44 CD8T L1
ENSG00000060688 SNRNP40 -646570 sc-eQTL 9.61e-01 -0.00395 0.0807 0.446 DC L1
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 1.40e-01 -0.141 0.095 0.446 DC L1
ENSG00000134644 PUM1 -415773 sc-eQTL 3.04e-01 -0.0769 0.0747 0.446 DC L1
ENSG00000162511 LAPTM5 -107556 sc-eQTL 3.55e-02 0.112 0.0529 0.446 DC L1
ENSG00000162517 PEF1 -994678 sc-eQTL 6.74e-01 -0.0364 0.0866 0.446 DC L1
ENSG00000168528 SERINC2 -759347 sc-eQTL 3.09e-01 0.0896 0.0879 0.446 DC L1
ENSG00000284543 LINC01226 -856008 sc-eQTL 5.70e-01 0.0332 0.0583 0.446 DC L1
ENSG00000287510 AL137857.1 -81475 sc-eQTL 1.23e-01 0.13 0.084 0.446 DC L1
ENSG00000060688 SNRNP40 -646570 sc-eQTL 1.12e-01 -0.0969 0.0607 0.44 Mono L1
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 8.50e-01 -0.0143 0.0757 0.44 Mono L1
ENSG00000134644 PUM1 -415773 sc-eQTL 1.09e-01 0.0776 0.0482 0.44 Mono L1
ENSG00000162511 LAPTM5 -107556 sc-eQTL 8.57e-01 0.00804 0.0446 0.44 Mono L1
ENSG00000162512 SDC3 -258540 sc-eQTL 3.84e-01 -0.0747 0.0856 0.44 Mono L1
ENSG00000162517 PEF1 -994678 sc-eQTL 7.34e-01 0.0205 0.0602 0.44 Mono L1
ENSG00000168528 SERINC2 -759347 sc-eQTL 3.03e-01 -0.0948 0.0918 0.44 Mono L1
ENSG00000284543 LINC01226 -856008 sc-eQTL 9.54e-01 0.00466 0.0811 0.44 Mono L1
ENSG00000287510 AL137857.1 -81475 sc-eQTL 4.74e-01 -0.0508 0.0708 0.44 Mono L1
ENSG00000060688 SNRNP40 -646570 sc-eQTL 3.67e-01 0.0764 0.0845 0.438 NK L1
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 1.29e-01 -0.0878 0.0576 0.438 NK L1
ENSG00000134644 PUM1 -415773 sc-eQTL 2.20e-01 0.0745 0.0606 0.438 NK L1
ENSG00000162511 LAPTM5 -107556 sc-eQTL 8.74e-01 0.0111 0.0699 0.438 NK L1
ENSG00000162517 PEF1 -994678 sc-eQTL 5.08e-01 0.0338 0.051 0.438 NK L1
ENSG00000186056 MATN1-AS1 -68286 sc-eQTL 4.05e-01 -0.0654 0.0785 0.438 NK L1
ENSG00000287510 AL137857.1 -81475 sc-eQTL 9.84e-02 0.12 0.0721 0.438 NK L1
ENSG00000060688 SNRNP40 -646570 sc-eQTL 4.32e-01 0.0492 0.0624 0.44 Other_T L1
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 6.36e-01 0.0317 0.0668 0.44 Other_T L1
ENSG00000134644 PUM1 -415773 sc-eQTL 5.84e-01 -0.033 0.06 0.44 Other_T L1
ENSG00000162511 LAPTM5 -107556 sc-eQTL 8.63e-05 0.19 0.0475 0.44 Other_T L1
ENSG00000162517 PEF1 -994678 sc-eQTL 8.28e-01 0.0143 0.0658 0.44 Other_T L1
ENSG00000186056 MATN1-AS1 -68286 sc-eQTL 1.88e-01 0.106 0.0803 0.44 Other_T L1
ENSG00000287510 AL137857.1 -81475 sc-eQTL 1.11e-01 -0.134 0.0835 0.44 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -646570 sc-eQTL 9.81e-01 0.00243 0.102 0.444 B_Activated L2
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 5.31e-01 -0.0648 0.103 0.444 B_Activated L2
ENSG00000134644 PUM1 -415773 sc-eQTL 6.87e-01 0.0387 0.0959 0.444 B_Activated L2
ENSG00000162510 MATN1 -73367 sc-eQTL 9.86e-01 -0.00144 0.0838 0.444 B_Activated L2
ENSG00000162511 LAPTM5 -107556 sc-eQTL 9.25e-01 0.00551 0.0585 0.444 B_Activated L2
ENSG00000162517 PEF1 -994678 sc-eQTL 5.34e-02 0.191 0.0984 0.444 B_Activated L2
ENSG00000186056 MATN1-AS1 -68286 sc-eQTL 6.60e-01 0.0416 0.0943 0.444 B_Activated L2
ENSG00000287510 AL137857.1 -81475 sc-eQTL 6.52e-01 -0.0378 0.0835 0.444 B_Activated L2
ENSG00000060688 SNRNP40 -646570 sc-eQTL 7.38e-01 0.0317 0.0944 0.44 B_Intermediate L2
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 6.31e-01 -0.0379 0.0786 0.44 B_Intermediate L2
ENSG00000134644 PUM1 -415773 sc-eQTL 9.26e-01 -0.00688 0.0742 0.44 B_Intermediate L2
ENSG00000162510 MATN1 -73367 sc-eQTL 5.23e-01 -0.0494 0.0772 0.44 B_Intermediate L2
ENSG00000162511 LAPTM5 -107556 sc-eQTL 4.78e-01 0.0337 0.0474 0.44 B_Intermediate L2
ENSG00000162517 PEF1 -994678 sc-eQTL 7.28e-01 -0.0306 0.088 0.44 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -68286 sc-eQTL 4.08e-01 0.055 0.0664 0.44 B_Intermediate L2
ENSG00000287510 AL137857.1 -81475 sc-eQTL 5.84e-01 0.0409 0.0744 0.44 B_Intermediate L2
ENSG00000060688 SNRNP40 -646570 sc-eQTL 8.04e-01 0.0233 0.0935 0.442 B_Memory L2
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 7.22e-01 -0.0307 0.0862 0.442 B_Memory L2
ENSG00000134644 PUM1 -415773 sc-eQTL 8.41e-01 0.015 0.075 0.442 B_Memory L2
ENSG00000162510 MATN1 -73367 sc-eQTL 5.05e-01 -0.0479 0.0717 0.442 B_Memory L2
ENSG00000162511 LAPTM5 -107556 sc-eQTL 2.91e-01 0.0671 0.0634 0.442 B_Memory L2
ENSG00000162517 PEF1 -994678 sc-eQTL 9.57e-01 0.00458 0.0849 0.442 B_Memory L2
ENSG00000186056 MATN1-AS1 -68286 sc-eQTL 2.04e-01 -0.0925 0.0725 0.442 B_Memory L2
ENSG00000287510 AL137857.1 -81475 sc-eQTL 8.88e-01 0.0121 0.0852 0.442 B_Memory L2
ENSG00000060688 SNRNP40 -646570 sc-eQTL 7.80e-02 0.148 0.0833 0.44 B_Naive1 L2
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 5.57e-01 0.0426 0.0724 0.44 B_Naive1 L2
ENSG00000134644 PUM1 -415773 sc-eQTL 8.04e-01 -0.0159 0.0639 0.44 B_Naive1 L2
ENSG00000162510 MATN1 -73367 sc-eQTL 1.38e-01 -0.0961 0.0645 0.44 B_Naive1 L2
ENSG00000162511 LAPTM5 -107556 sc-eQTL 8.31e-01 -0.00925 0.0433 0.44 B_Naive1 L2
ENSG00000162517 PEF1 -994678 sc-eQTL 9.21e-01 -0.00756 0.0764 0.44 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -68286 sc-eQTL 3.36e-01 0.0547 0.0568 0.44 B_Naive1 L2
ENSG00000287510 AL137857.1 -81475 sc-eQTL 2.10e-01 0.088 0.07 0.44 B_Naive1 L2
ENSG00000060688 SNRNP40 -646570 sc-eQTL 7.91e-01 0.0237 0.0895 0.44 B_Naive2 L2
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 3.01e-01 -0.0765 0.0737 0.44 B_Naive2 L2
ENSG00000134644 PUM1 -415773 sc-eQTL 1.02e-01 -0.118 0.0719 0.44 B_Naive2 L2
ENSG00000162510 MATN1 -73367 sc-eQTL 5.68e-01 0.0397 0.0694 0.44 B_Naive2 L2
ENSG00000162511 LAPTM5 -107556 sc-eQTL 4.77e-01 -0.0336 0.0471 0.44 B_Naive2 L2
ENSG00000162517 PEF1 -994678 sc-eQTL 4.71e-01 0.0618 0.0857 0.44 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -68286 sc-eQTL 2.06e-01 0.0867 0.0684 0.44 B_Naive2 L2
ENSG00000287510 AL137857.1 -81475 sc-eQTL 5.39e-01 0.0456 0.0741 0.44 B_Naive2 L2
ENSG00000060688 SNRNP40 -646570 sc-eQTL 7.55e-01 -0.0274 0.0876 0.445 CD4_CTL L2
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 7.88e-02 -0.151 0.0855 0.445 CD4_CTL L2
ENSG00000134644 PUM1 -415773 sc-eQTL 3.12e-01 0.0856 0.0843 0.445 CD4_CTL L2
ENSG00000162511 LAPTM5 -107556 sc-eQTL 4.12e-01 0.0619 0.0752 0.445 CD4_CTL L2
ENSG00000162517 PEF1 -994678 sc-eQTL 1.93e-01 -0.101 0.0769 0.445 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -68286 sc-eQTL 7.34e-01 -0.0281 0.0824 0.445 CD4_CTL L2
ENSG00000287510 AL137857.1 -81475 sc-eQTL 5.49e-01 0.0437 0.0727 0.445 CD4_CTL L2
ENSG00000060688 SNRNP40 -646570 sc-eQTL 4.38e-01 0.055 0.0708 0.44 CD4_Naive L2
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 7.88e-01 -0.0169 0.0628 0.44 CD4_Naive L2
ENSG00000134644 PUM1 -415773 sc-eQTL 9.81e-01 -0.00117 0.0502 0.44 CD4_Naive L2
ENSG00000162511 LAPTM5 -107556 sc-eQTL 1.41e-01 0.079 0.0535 0.44 CD4_Naive L2
ENSG00000162517 PEF1 -994678 sc-eQTL 7.34e-01 -0.02 0.059 0.44 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -68286 sc-eQTL 4.66e-01 0.0398 0.0545 0.44 CD4_Naive L2
ENSG00000287510 AL137857.1 -81475 sc-eQTL 6.05e-01 0.0324 0.0626 0.44 CD4_Naive L2
ENSG00000060688 SNRNP40 -646570 sc-eQTL 2.81e-01 -0.0947 0.0876 0.44 CD4_TCM L2
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 7.40e-01 0.0235 0.0708 0.44 CD4_TCM L2
ENSG00000134644 PUM1 -415773 sc-eQTL 6.36e-01 0.0297 0.0626 0.44 CD4_TCM L2
ENSG00000162511 LAPTM5 -107556 sc-eQTL 6.73e-01 0.022 0.052 0.44 CD4_TCM L2
ENSG00000162517 PEF1 -994678 sc-eQTL 1.73e-01 0.0949 0.0694 0.44 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -68286 sc-eQTL 6.83e-01 0.027 0.0659 0.44 CD4_TCM L2
ENSG00000287510 AL137857.1 -81475 sc-eQTL 9.49e-01 -0.00474 0.0735 0.44 CD4_TCM L2
ENSG00000060688 SNRNP40 -646570 sc-eQTL 3.27e-01 0.0862 0.0876 0.44 CD4_TEM L2
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 1.49e-01 -0.121 0.0833 0.44 CD4_TEM L2
ENSG00000134644 PUM1 -415773 sc-eQTL 6.38e-01 0.0328 0.0697 0.44 CD4_TEM L2
ENSG00000162511 LAPTM5 -107556 sc-eQTL 1.48e-01 0.102 0.0702 0.44 CD4_TEM L2
ENSG00000162517 PEF1 -994678 sc-eQTL 6.71e-01 -0.0336 0.079 0.44 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -68286 sc-eQTL 2.26e-01 -0.0999 0.0822 0.44 CD4_TEM L2
ENSG00000287510 AL137857.1 -81475 sc-eQTL 5.77e-01 -0.0454 0.0812 0.44 CD4_TEM L2
ENSG00000060688 SNRNP40 -646570 sc-eQTL 9.32e-01 -0.00832 0.097 0.44 CD8_CTL L2
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 9.04e-01 0.00902 0.0744 0.44 CD8_CTL L2
ENSG00000134644 PUM1 -415773 sc-eQTL 9.67e-01 -0.00295 0.0722 0.44 CD8_CTL L2
ENSG00000162511 LAPTM5 -107556 sc-eQTL 2.25e-01 0.097 0.0797 0.44 CD8_CTL L2
ENSG00000162517 PEF1 -994678 sc-eQTL 3.96e-01 0.0591 0.0695 0.44 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -68286 sc-eQTL 7.91e-01 0.0223 0.0841 0.44 CD8_CTL L2
ENSG00000287510 AL137857.1 -81475 sc-eQTL 6.08e-01 -0.0406 0.079 0.44 CD8_CTL L2
ENSG00000060688 SNRNP40 -646570 sc-eQTL 2.00e-01 0.113 0.0879 0.44 CD8_Naive L2
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 1.20e-01 -0.118 0.0757 0.44 CD8_Naive L2
ENSG00000134644 PUM1 -415773 sc-eQTL 2.52e-01 0.0701 0.0611 0.44 CD8_Naive L2
ENSG00000162511 LAPTM5 -107556 sc-eQTL 6.14e-01 0.0297 0.0586 0.44 CD8_Naive L2
ENSG00000162517 PEF1 -994678 sc-eQTL 7.22e-01 0.0291 0.0816 0.44 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -68286 sc-eQTL 6.01e-02 0.137 0.0726 0.44 CD8_Naive L2
ENSG00000287510 AL137857.1 -81475 sc-eQTL 5.45e-01 -0.0483 0.0797 0.44 CD8_Naive L2
ENSG00000060688 SNRNP40 -646570 sc-eQTL 4.10e-01 -0.0814 0.0985 0.44 CD8_TCM L2
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 5.84e-01 0.0495 0.0903 0.44 CD8_TCM L2
ENSG00000134644 PUM1 -415773 sc-eQTL 7.91e-01 0.0225 0.085 0.44 CD8_TCM L2
ENSG00000162511 LAPTM5 -107556 sc-eQTL 8.74e-01 0.0141 0.089 0.44 CD8_TCM L2
ENSG00000162517 PEF1 -994678 sc-eQTL 4.52e-01 -0.0684 0.0908 0.44 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -68286 sc-eQTL 1.34e-02 -0.202 0.0811 0.44 CD8_TCM L2
ENSG00000287510 AL137857.1 -81475 sc-eQTL 3.50e-01 0.0779 0.0831 0.44 CD8_TCM L2
ENSG00000060688 SNRNP40 -646570 sc-eQTL 2.37e-01 0.108 0.0908 0.432 CD8_TEM L2
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 7.35e-01 0.0296 0.0874 0.432 CD8_TEM L2
ENSG00000134644 PUM1 -415773 sc-eQTL 7.88e-01 -0.0241 0.0893 0.432 CD8_TEM L2
ENSG00000162511 LAPTM5 -107556 sc-eQTL 9.83e-01 -0.00183 0.084 0.432 CD8_TEM L2
ENSG00000162517 PEF1 -994678 sc-eQTL 7.59e-01 0.0242 0.0791 0.432 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -68286 sc-eQTL 5.20e-01 -0.0562 0.0871 0.432 CD8_TEM L2
ENSG00000287510 AL137857.1 -81475 sc-eQTL 2.41e-01 0.0925 0.0786 0.432 CD8_TEM L2
ENSG00000060688 SNRNP40 -646570 sc-eQTL 9.10e-01 -0.0105 0.0927 0.444 MAIT L2
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 1.72e-01 0.112 0.0818 0.444 MAIT L2
ENSG00000134644 PUM1 -415773 sc-eQTL 7.57e-01 0.0244 0.0787 0.444 MAIT L2
ENSG00000162511 LAPTM5 -107556 sc-eQTL 5.91e-03 0.203 0.0729 0.444 MAIT L2
ENSG00000162517 PEF1 -994678 sc-eQTL 8.73e-01 0.0131 0.0816 0.444 MAIT L2
ENSG00000186056 MATN1-AS1 -68286 sc-eQTL 7.34e-01 0.0281 0.0827 0.444 MAIT L2
ENSG00000287510 AL137857.1 -81475 sc-eQTL 3.18e-01 -0.0851 0.0851 0.444 MAIT L2
ENSG00000060688 SNRNP40 -646570 sc-eQTL 5.31e-01 0.0604 0.0961 0.44 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 9.63e-01 0.00379 0.0813 0.44 NK_CD56bright L2
ENSG00000134644 PUM1 -415773 sc-eQTL 6.95e-01 0.0335 0.0853 0.44 NK_CD56bright L2
ENSG00000162511 LAPTM5 -107556 sc-eQTL 1.51e-01 0.121 0.0838 0.44 NK_CD56bright L2
ENSG00000162517 PEF1 -994678 sc-eQTL 4.03e-01 -0.0684 0.0816 0.44 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -68286 sc-eQTL 3.06e-02 -0.182 0.0836 0.44 NK_CD56bright L2
ENSG00000287510 AL137857.1 -81475 sc-eQTL 2.35e-01 0.0989 0.0831 0.44 NK_CD56bright L2
ENSG00000060688 SNRNP40 -646570 sc-eQTL 8.50e-01 -0.0171 0.0903 0.438 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 4.03e-02 -0.136 0.0661 0.438 NK_CD56dim L2
ENSG00000134644 PUM1 -415773 sc-eQTL 1.87e-01 0.0903 0.0682 0.438 NK_CD56dim L2
ENSG00000162511 LAPTM5 -107556 sc-eQTL 9.34e-01 -0.00602 0.073 0.438 NK_CD56dim L2
ENSG00000162517 PEF1 -994678 sc-eQTL 5.87e-01 -0.0354 0.0649 0.438 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -68286 sc-eQTL 2.55e-01 -0.104 0.0912 0.438 NK_CD56dim L2
ENSG00000287510 AL137857.1 -81475 sc-eQTL 2.69e-01 0.0835 0.0753 0.438 NK_CD56dim L2
ENSG00000060688 SNRNP40 -646570 sc-eQTL 7.95e-01 0.025 0.0964 0.438 NK_HLA L2
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 5.70e-01 -0.049 0.0861 0.438 NK_HLA L2
ENSG00000134644 PUM1 -415773 sc-eQTL 7.97e-01 -0.0217 0.0839 0.438 NK_HLA L2
ENSG00000162511 LAPTM5 -107556 sc-eQTL 9.46e-01 0.00548 0.0801 0.438 NK_HLA L2
ENSG00000162517 PEF1 -994678 sc-eQTL 3.51e-01 0.0842 0.0901 0.438 NK_HLA L2
ENSG00000186056 MATN1-AS1 -68286 sc-eQTL 9.56e-01 0.00473 0.0852 0.438 NK_HLA L2
ENSG00000287510 AL137857.1 -81475 sc-eQTL 5.85e-01 -0.045 0.0823 0.438 NK_HLA L2
ENSG00000060688 SNRNP40 -646570 sc-eQTL 5.30e-01 0.0551 0.0876 0.438 NK_cytokine L2
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 8.71e-01 -0.0112 0.0684 0.438 NK_cytokine L2
ENSG00000134644 PUM1 -415773 sc-eQTL 1.97e-01 0.0955 0.0737 0.438 NK_cytokine L2
ENSG00000162511 LAPTM5 -107556 sc-eQTL 9.63e-01 -0.00377 0.0815 0.438 NK_cytokine L2
ENSG00000162517 PEF1 -994678 sc-eQTL 1.88e-01 0.0912 0.0691 0.438 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -68286 sc-eQTL 4.11e-01 0.071 0.0862 0.438 NK_cytokine L2
ENSG00000287510 AL137857.1 -81475 sc-eQTL 1.12e-01 0.127 0.0798 0.438 NK_cytokine L2
ENSG00000060688 SNRNP40 -646570 sc-eQTL 8.69e-01 0.0164 0.099 0.441 PB L2
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 7.79e-01 -0.0323 0.115 0.441 PB L2
ENSG00000134644 PUM1 -415773 sc-eQTL 6.58e-01 0.0442 0.0996 0.441 PB L2
ENSG00000162510 MATN1 -73367 sc-eQTL 9.19e-01 0.00951 0.093 0.441 PB L2
ENSG00000162511 LAPTM5 -107556 sc-eQTL 8.35e-01 -0.0138 0.0664 0.441 PB L2
ENSG00000162517 PEF1 -994678 sc-eQTL 2.15e-01 0.127 0.102 0.441 PB L2
ENSG00000186056 MATN1-AS1 -68286 sc-eQTL 3.03e-01 0.0936 0.0905 0.441 PB L2
ENSG00000287510 AL137857.1 -81475 sc-eQTL 4.06e-01 -0.0805 0.0965 0.441 PB L2
ENSG00000060688 SNRNP40 -646570 sc-eQTL 7.41e-01 -0.0232 0.0701 0.439 Pro_T L2
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 8.87e-01 -0.0127 0.089 0.439 Pro_T L2
ENSG00000134644 PUM1 -415773 sc-eQTL 8.98e-01 0.0106 0.083 0.439 Pro_T L2
ENSG00000162511 LAPTM5 -107556 sc-eQTL 4.11e-01 0.0489 0.0595 0.439 Pro_T L2
ENSG00000162517 PEF1 -994678 sc-eQTL 8.91e-01 0.012 0.0874 0.439 Pro_T L2
ENSG00000186056 MATN1-AS1 -68286 sc-eQTL 6.15e-01 -0.0419 0.0832 0.439 Pro_T L2
ENSG00000287510 AL137857.1 -81475 sc-eQTL 7.66e-01 -0.0228 0.0765 0.439 Pro_T L2
ENSG00000060688 SNRNP40 -646570 sc-eQTL 5.12e-01 -0.0586 0.0893 0.44 Treg L2
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 6.51e-01 0.0392 0.0864 0.44 Treg L2
ENSG00000134644 PUM1 -415773 sc-eQTL 3.90e-01 0.0595 0.0691 0.44 Treg L2
ENSG00000162511 LAPTM5 -107556 sc-eQTL 3.04e-01 0.0814 0.079 0.44 Treg L2
ENSG00000162517 PEF1 -994678 sc-eQTL 5.70e-01 0.0486 0.0855 0.44 Treg L2
ENSG00000186056 MATN1-AS1 -68286 sc-eQTL 9.68e-01 -0.00329 0.0807 0.44 Treg L2
ENSG00000287510 AL137857.1 -81475 sc-eQTL 3.96e-01 0.0684 0.0805 0.44 Treg L2
ENSG00000060688 SNRNP40 -646570 sc-eQTL 5.83e-02 0.18 0.0943 0.451 cDC L2
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 5.86e-01 0.0562 0.103 0.451 cDC L2
ENSG00000134644 PUM1 -415773 sc-eQTL 8.41e-01 -0.0178 0.0886 0.451 cDC L2
ENSG00000162511 LAPTM5 -107556 sc-eQTL 5.48e-02 0.119 0.0615 0.451 cDC L2
ENSG00000162517 PEF1 -994678 sc-eQTL 5.49e-01 -0.0539 0.0898 0.451 cDC L2
ENSG00000168528 SERINC2 -759347 sc-eQTL 4.60e-01 0.0589 0.0796 0.451 cDC L2
ENSG00000284543 LINC01226 -856008 sc-eQTL 2.29e-01 0.0942 0.078 0.451 cDC L2
ENSG00000287510 AL137857.1 -81475 sc-eQTL 2.81e-02 0.184 0.0832 0.451 cDC L2
ENSG00000060688 SNRNP40 -646570 sc-eQTL 4.86e-01 0.0512 0.0735 0.44 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 6.32e-01 0.0394 0.082 0.44 cMono_IL1B L2
ENSG00000134644 PUM1 -415773 sc-eQTL 7.20e-02 0.0996 0.0551 0.44 cMono_IL1B L2
ENSG00000162511 LAPTM5 -107556 sc-eQTL 5.99e-01 -0.0257 0.0487 0.44 cMono_IL1B L2
ENSG00000162512 SDC3 -258540 sc-eQTL 9.49e-01 -0.00587 0.0918 0.44 cMono_IL1B L2
ENSG00000162517 PEF1 -994678 sc-eQTL 4.44e-01 0.0574 0.0749 0.44 cMono_IL1B L2
ENSG00000168528 SERINC2 -759347 sc-eQTL 3.60e-01 -0.085 0.0927 0.44 cMono_IL1B L2
ENSG00000284543 LINC01226 -856008 sc-eQTL 5.65e-01 -0.0473 0.0821 0.44 cMono_IL1B L2
ENSG00000287510 AL137857.1 -81475 sc-eQTL 2.42e-01 -0.0896 0.0764 0.44 cMono_IL1B L2
ENSG00000060688 SNRNP40 -646570 sc-eQTL 2.37e-01 -0.0918 0.0774 0.44 cMono_S100A L2
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 5.94e-01 -0.049 0.0917 0.44 cMono_S100A L2
ENSG00000134644 PUM1 -415773 sc-eQTL 5.06e-01 0.0442 0.0663 0.44 cMono_S100A L2
ENSG00000162511 LAPTM5 -107556 sc-eQTL 6.34e-01 0.0243 0.051 0.44 cMono_S100A L2
ENSG00000162512 SDC3 -258540 sc-eQTL 7.07e-01 0.0331 0.088 0.44 cMono_S100A L2
ENSG00000162517 PEF1 -994678 sc-eQTL 6.38e-01 -0.0374 0.0795 0.44 cMono_S100A L2
ENSG00000168528 SERINC2 -759347 sc-eQTL 3.22e-01 -0.0924 0.093 0.44 cMono_S100A L2
ENSG00000284543 LINC01226 -856008 sc-eQTL 9.62e-01 0.00357 0.0757 0.44 cMono_S100A L2
ENSG00000287510 AL137857.1 -81475 sc-eQTL 2.67e-01 -0.0844 0.0758 0.44 cMono_S100A L2
ENSG00000060688 SNRNP40 -646570 sc-eQTL 4.70e-01 0.0845 0.117 0.455 gdT L2
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 9.08e-01 0.0116 0.1 0.455 gdT L2
ENSG00000134644 PUM1 -415773 sc-eQTL 5.57e-01 0.0608 0.103 0.455 gdT L2
ENSG00000162511 LAPTM5 -107556 sc-eQTL 3.30e-01 0.11 0.112 0.455 gdT L2
ENSG00000162517 PEF1 -994678 sc-eQTL 7.84e-01 -0.0283 0.103 0.455 gdT L2
ENSG00000186056 MATN1-AS1 -68286 sc-eQTL 6.47e-01 0.0475 0.104 0.455 gdT L2
ENSG00000287510 AL137857.1 -81475 sc-eQTL 1.11e-01 -0.16 0.0996 0.455 gdT L2
ENSG00000060688 SNRNP40 -646570 sc-eQTL 1.58e-01 -0.124 0.0878 0.44 intMono L2
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 3.58e-01 0.0872 0.0946 0.44 intMono L2
ENSG00000134644 PUM1 -415773 sc-eQTL 6.96e-01 0.0315 0.0804 0.44 intMono L2
ENSG00000162511 LAPTM5 -107556 sc-eQTL 6.09e-01 -0.0323 0.0631 0.44 intMono L2
ENSG00000162512 SDC3 -258540 sc-eQTL 7.04e-01 -0.0329 0.0864 0.44 intMono L2
ENSG00000162517 PEF1 -994678 sc-eQTL 6.23e-01 0.0447 0.0907 0.44 intMono L2
ENSG00000168528 SERINC2 -759347 sc-eQTL 6.85e-01 -0.0368 0.0904 0.44 intMono L2
ENSG00000284543 LINC01226 -856008 sc-eQTL 3.40e-01 -0.0818 0.0855 0.44 intMono L2
ENSG00000287510 AL137857.1 -81475 sc-eQTL 1.66e-01 -0.119 0.0853 0.44 intMono L2
ENSG00000060688 SNRNP40 -646570 sc-eQTL 6.02e-01 -0.0425 0.0815 0.441 ncMono L2
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 3.62e-01 -0.0792 0.0868 0.441 ncMono L2
ENSG00000134644 PUM1 -415773 sc-eQTL 1.37e-01 0.106 0.0706 0.441 ncMono L2
ENSG00000162511 LAPTM5 -107556 sc-eQTL 3.62e-01 0.0588 0.0644 0.441 ncMono L2
ENSG00000162512 SDC3 -258540 sc-eQTL 2.82e-01 -0.0779 0.0721 0.441 ncMono L2
ENSG00000162517 PEF1 -994678 sc-eQTL 4.50e-01 0.0628 0.0828 0.441 ncMono L2
ENSG00000168528 SERINC2 -759347 sc-eQTL 5.99e-01 -0.0415 0.0789 0.441 ncMono L2
ENSG00000284543 LINC01226 -856008 sc-eQTL 2.37e-02 0.178 0.0779 0.441 ncMono L2
ENSG00000287510 AL137857.1 -81475 sc-eQTL 3.25e-01 0.0805 0.0816 0.441 ncMono L2
ENSG00000060688 SNRNP40 -646570 sc-eQTL 9.01e-02 -0.164 0.0959 0.449 pDC L2
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 8.04e-01 -0.0264 0.106 0.449 pDC L2
ENSG00000134644 PUM1 -415773 sc-eQTL 9.48e-01 0.00577 0.0881 0.449 pDC L2
ENSG00000162511 LAPTM5 -107556 sc-eQTL 9.11e-01 0.00913 0.0819 0.449 pDC L2
ENSG00000162517 PEF1 -994678 sc-eQTL 2.09e-01 0.133 0.106 0.449 pDC L2
ENSG00000168528 SERINC2 -759347 sc-eQTL 6.00e-02 -0.186 0.0982 0.449 pDC L2
ENSG00000284543 LINC01226 -856008 sc-eQTL 1.02e-01 -0.126 0.0765 0.449 pDC L2
ENSG00000287510 AL137857.1 -81475 sc-eQTL 8.30e-01 0.0195 0.0907 0.449 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -646570 sc-eQTL 3.35e-01 0.0867 0.0897 0.44 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 6.69e-01 -0.032 0.0748 0.44 B_Memory LOneK1K
ENSG00000134644 PUM1 -415773 sc-eQTL 9.37e-01 0.00524 0.0663 0.44 B_Memory LOneK1K
ENSG00000162510 MATN1 -73367 sc-eQTL 1.54e-01 -0.107 0.0752 0.44 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -107556 sc-eQTL 3.53e-01 0.0441 0.0474 0.44 B_Memory LOneK1K
ENSG00000162517 PEF1 -994678 sc-eQTL 6.66e-01 -0.034 0.0786 0.44 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -68286 sc-eQTL 8.32e-01 0.0133 0.0628 0.44 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -81475 sc-eQTL 8.56e-01 0.0125 0.0684 0.44 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -646570 sc-eQTL 1.01e-01 0.134 0.0812 0.44 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 9.90e-01 -0.000829 0.0646 0.44 B_Naive LOneK1K
ENSG00000134644 PUM1 -415773 sc-eQTL 4.37e-01 -0.0476 0.061 0.44 B_Naive LOneK1K
ENSG00000162510 MATN1 -73367 sc-eQTL 2.94e-01 -0.0618 0.0587 0.44 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -107556 sc-eQTL 8.60e-01 -0.0073 0.0414 0.44 B_Naive LOneK1K
ENSG00000162517 PEF1 -994678 sc-eQTL 9.04e-01 0.00913 0.0757 0.44 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -68286 sc-eQTL 4.13e-01 0.0438 0.0534 0.44 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -81475 sc-eQTL 1.61e-01 0.0889 0.0633 0.44 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -646570 sc-eQTL 2.82e-01 -0.0747 0.0692 0.44 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 9.92e-01 -0.000784 0.0786 0.44 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -415773 sc-eQTL 1.20e-01 0.0778 0.0499 0.44 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -107556 sc-eQTL 9.90e-01 -0.000554 0.0441 0.44 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -258540 sc-eQTL 9.39e-01 0.00687 0.0899 0.44 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -994678 sc-eQTL 7.46e-01 -0.0205 0.0632 0.44 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -759347 sc-eQTL 2.89e-01 -0.098 0.0923 0.44 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -856008 sc-eQTL 7.85e-01 -0.0207 0.0758 0.44 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -81475 sc-eQTL 3.88e-01 -0.0613 0.0709 0.44 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -646570 sc-eQTL 3.76e-01 -0.0683 0.077 0.438 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 5.46e-01 -0.051 0.0843 0.438 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -415773 sc-eQTL 4.15e-01 0.0564 0.069 0.438 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -107556 sc-eQTL 6.82e-01 -0.0227 0.0553 0.438 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -258540 sc-eQTL 1.72e-01 -0.11 0.0804 0.438 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -994678 sc-eQTL 2.59e-01 0.0829 0.0732 0.438 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -759347 sc-eQTL 4.91e-01 -0.0577 0.0837 0.438 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -856008 sc-eQTL 7.88e-01 -0.0214 0.0795 0.438 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -81475 sc-eQTL 5.29e-01 -0.0501 0.0795 0.438 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -646570 sc-eQTL 4.51e-01 0.0643 0.0851 0.438 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -646764 sc-eQTL 1.14e-01 -0.0919 0.0578 0.438 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -415773 sc-eQTL 1.53e-01 0.091 0.0634 0.438 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -107556 sc-eQTL 9.82e-01 -0.0016 0.0712 0.438 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -994678 sc-eQTL 4.16e-01 0.044 0.054 0.438 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -68286 sc-eQTL 6.41e-01 -0.0384 0.0821 0.438 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -81475 sc-eQTL 2.52e-01 0.0813 0.0707 0.438 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162511 LAPTM5 -107556 eQTL 0.00132 -0.0317 0.00984 0.0 0.0 0.461
ENSG00000168528 SERINC2 -759347 eQTL 0.0154 0.0925 0.0381 0.0 0.0 0.461

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162511 LAPTM5 -107556 5.07e-06 5.32e-06 7.57e-07 3.41e-06 1.8e-06 1.53e-06 7.57e-06 1.28e-06 4.65e-06 3.06e-06 7.57e-06 2.82e-06 9.33e-06 1.89e-06 9.95e-07 4.32e-06 2.92e-06 3.74e-06 1.87e-06 1.71e-06 2.89e-06 6.58e-06 4.87e-06 2.06e-06 8.88e-06 2.25e-06 2.88e-06 1.86e-06 6.27e-06 6.28e-06 2.59e-06 4.81e-07 6.77e-07 2.34e-06 1.96e-06 1.3e-06 1.11e-06 6.18e-07 1.12e-06 7.37e-07 8.93e-07 7.28e-06 6.81e-07 1.52e-07 7.85e-07 9.68e-07 1.05e-06 7.08e-07 6.17e-07
ENSG00000284543 \N -856063 2.76e-07 1.34e-07 5.93e-08 1.83e-07 9.8e-08 9.05e-08 1.67e-07 5.75e-08 1.45e-07 6.4e-08 1.63e-07 1.11e-07 1.59e-07 7.37e-08 5.72e-08 7.74e-08 4.31e-08 1.44e-07 6.92e-08 4.8e-08 1.25e-07 1.26e-07 1.5e-07 3.17e-08 1.63e-07 1.22e-07 1.18e-07 1.04e-07 1.24e-07 1e-07 1.06e-07 3.93e-08 3.13e-08 8.56e-08 4.84e-08 2.99e-08 5.3e-08 8.68e-08 6.57e-08 4.19e-08 5.34e-08 1.46e-07 5.22e-08 7.51e-09 3.81e-08 1.92e-08 9.96e-08 1.92e-09 4.82e-08