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Genes within 1Mb (chr1:30645882:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -650906 sc-eQTL 4.57e-02 0.162 0.0804 0.415 B L1
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 5.35e-01 0.0403 0.0649 0.415 B L1
ENSG00000134644 PUM1 -420109 sc-eQTL 1.24e-01 -0.0838 0.0542 0.415 B L1
ENSG00000162510 MATN1 -77703 sc-eQTL 9.24e-02 -0.0963 0.057 0.415 B L1
ENSG00000162511 LAPTM5 -111892 sc-eQTL 6.05e-01 0.0232 0.0449 0.415 B L1
ENSG00000162517 PEF1 -999014 sc-eQTL 9.00e-02 0.115 0.0673 0.415 B L1
ENSG00000186056 MATN1-AS1 -72622 sc-eQTL 7.88e-02 0.0923 0.0522 0.415 B L1
ENSG00000287510 AL137857.1 -85811 sc-eQTL 9.48e-01 -0.00405 0.0623 0.415 B L1
ENSG00000060688 SNRNP40 -650906 sc-eQTL 1.19e-01 -0.112 0.0714 0.415 CD4T L1
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 5.72e-01 -0.0318 0.0561 0.415 CD4T L1
ENSG00000134644 PUM1 -420109 sc-eQTL 3.10e-02 0.107 0.0494 0.415 CD4T L1
ENSG00000162511 LAPTM5 -111892 sc-eQTL 8.10e-01 -0.0133 0.0554 0.415 CD4T L1
ENSG00000162517 PEF1 -999014 sc-eQTL 3.60e-01 0.053 0.0578 0.415 CD4T L1
ENSG00000186056 MATN1-AS1 -72622 sc-eQTL 1.65e-01 0.0687 0.0493 0.415 CD4T L1
ENSG00000287510 AL137857.1 -85811 sc-eQTL 1.93e-01 0.0771 0.0591 0.415 CD4T L1
ENSG00000060688 SNRNP40 -650906 sc-eQTL 6.65e-02 0.172 0.0932 0.415 CD8T L1
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 1.71e-01 -0.0855 0.0622 0.415 CD8T L1
ENSG00000134644 PUM1 -420109 sc-eQTL 7.15e-02 0.0989 0.0546 0.415 CD8T L1
ENSG00000162511 LAPTM5 -111892 sc-eQTL 9.74e-01 -0.00176 0.0535 0.415 CD8T L1
ENSG00000162517 PEF1 -999014 sc-eQTL 7.58e-03 0.175 0.0647 0.415 CD8T L1
ENSG00000186056 MATN1-AS1 -72622 sc-eQTL 5.95e-01 -0.0334 0.0626 0.415 CD8T L1
ENSG00000287510 AL137857.1 -85811 sc-eQTL 7.84e-01 -0.0216 0.0787 0.415 CD8T L1
ENSG00000060688 SNRNP40 -650906 sc-eQTL 5.51e-01 -0.0498 0.0833 0.421 DC L1
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 8.35e-01 -0.0206 0.0988 0.421 DC L1
ENSG00000134644 PUM1 -420109 sc-eQTL 3.82e-02 -0.16 0.0765 0.421 DC L1
ENSG00000162511 LAPTM5 -111892 sc-eQTL 2.94e-01 -0.0579 0.0551 0.421 DC L1
ENSG00000162517 PEF1 -999014 sc-eQTL 7.84e-01 0.0246 0.0896 0.421 DC L1
ENSG00000168528 SERINC2 -763683 sc-eQTL 6.84e-01 0.0371 0.0911 0.421 DC L1
ENSG00000284543 LINC01226 -860344 sc-eQTL 9.16e-01 -0.00639 0.0603 0.421 DC L1
ENSG00000287510 AL137857.1 -85811 sc-eQTL 6.87e-01 0.0353 0.0873 0.421 DC L1
ENSG00000060688 SNRNP40 -650906 sc-eQTL 1.61e-01 -0.0912 0.0648 0.415 Mono L1
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 6.49e-01 -0.0367 0.0807 0.415 Mono L1
ENSG00000134644 PUM1 -420109 sc-eQTL 6.56e-01 -0.0231 0.0517 0.415 Mono L1
ENSG00000162511 LAPTM5 -111892 sc-eQTL 2.71e-01 0.0523 0.0475 0.415 Mono L1
ENSG00000162512 SDC3 -262876 sc-eQTL 6.89e-01 -0.0366 0.0914 0.415 Mono L1
ENSG00000162517 PEF1 -999014 sc-eQTL 6.79e-02 0.117 0.0637 0.415 Mono L1
ENSG00000168528 SERINC2 -763683 sc-eQTL 1.20e-01 0.152 0.0976 0.415 Mono L1
ENSG00000284543 LINC01226 -860344 sc-eQTL 4.81e-01 -0.0609 0.0863 0.415 Mono L1
ENSG00000287510 AL137857.1 -85811 sc-eQTL 9.66e-01 -0.00327 0.0756 0.415 Mono L1
ENSG00000060688 SNRNP40 -650906 sc-eQTL 2.37e-01 0.105 0.0885 0.414 NK L1
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 6.06e-01 -0.0313 0.0607 0.414 NK L1
ENSG00000134644 PUM1 -420109 sc-eQTL 9.83e-02 -0.105 0.0633 0.414 NK L1
ENSG00000162511 LAPTM5 -111892 sc-eQTL 2.58e-02 0.163 0.0725 0.414 NK L1
ENSG00000162517 PEF1 -999014 sc-eQTL 4.85e-01 0.0374 0.0535 0.414 NK L1
ENSG00000186056 MATN1-AS1 -72622 sc-eQTL 6.37e-01 -0.039 0.0824 0.414 NK L1
ENSG00000287510 AL137857.1 -85811 sc-eQTL 2.85e-01 0.0814 0.0759 0.414 NK L1
ENSG00000060688 SNRNP40 -650906 sc-eQTL 1.77e-02 0.157 0.0659 0.415 Other_T L1
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 2.88e-01 -0.0757 0.0711 0.415 Other_T L1
ENSG00000134644 PUM1 -420109 sc-eQTL 4.87e-01 0.0447 0.0641 0.415 Other_T L1
ENSG00000162511 LAPTM5 -111892 sc-eQTL 8.61e-01 0.0092 0.0526 0.415 Other_T L1
ENSG00000162517 PEF1 -999014 sc-eQTL 8.01e-01 -0.0177 0.0702 0.415 Other_T L1
ENSG00000186056 MATN1-AS1 -72622 sc-eQTL 6.68e-01 0.0369 0.0861 0.415 Other_T L1
ENSG00000287510 AL137857.1 -85811 sc-eQTL 9.42e-02 -0.15 0.0891 0.415 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -650906 sc-eQTL 2.42e-01 -0.123 0.105 0.416 B_Activated L2
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 5.79e-01 -0.0588 0.106 0.416 B_Activated L2
ENSG00000134644 PUM1 -420109 sc-eQTL 9.63e-01 -0.00463 0.0985 0.416 B_Activated L2
ENSG00000162510 MATN1 -77703 sc-eQTL 4.20e-01 -0.0694 0.0859 0.416 B_Activated L2
ENSG00000162511 LAPTM5 -111892 sc-eQTL 9.99e-01 5e-05 0.06 0.416 B_Activated L2
ENSG00000162517 PEF1 -999014 sc-eQTL 7.30e-01 0.0353 0.102 0.416 B_Activated L2
ENSG00000186056 MATN1-AS1 -72622 sc-eQTL 5.39e-01 -0.0595 0.0968 0.416 B_Activated L2
ENSG00000287510 AL137857.1 -85811 sc-eQTL 9.79e-01 0.00228 0.0857 0.416 B_Activated L2
ENSG00000060688 SNRNP40 -650906 sc-eQTL 6.60e-01 -0.0447 0.102 0.414 B_Intermediate L2
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 5.82e-01 -0.0467 0.0846 0.414 B_Intermediate L2
ENSG00000134644 PUM1 -420109 sc-eQTL 5.85e-01 -0.0436 0.0798 0.414 B_Intermediate L2
ENSG00000162510 MATN1 -77703 sc-eQTL 4.71e-01 -0.06 0.0831 0.414 B_Intermediate L2
ENSG00000162511 LAPTM5 -111892 sc-eQTL 5.36e-01 -0.0316 0.051 0.414 B_Intermediate L2
ENSG00000162517 PEF1 -999014 sc-eQTL 1.99e-01 0.122 0.0944 0.414 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -72622 sc-eQTL 8.24e-02 0.124 0.0711 0.414 B_Intermediate L2
ENSG00000287510 AL137857.1 -85811 sc-eQTL 3.18e-01 0.0801 0.08 0.414 B_Intermediate L2
ENSG00000060688 SNRNP40 -650906 sc-eQTL 9.32e-02 0.164 0.0972 0.418 B_Memory L2
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 4.89e-01 -0.0624 0.09 0.418 B_Memory L2
ENSG00000134644 PUM1 -420109 sc-eQTL 8.26e-01 0.0172 0.0784 0.418 B_Memory L2
ENSG00000162510 MATN1 -77703 sc-eQTL 3.11e-01 -0.0761 0.0748 0.418 B_Memory L2
ENSG00000162511 LAPTM5 -111892 sc-eQTL 5.93e-01 -0.0356 0.0665 0.418 B_Memory L2
ENSG00000162517 PEF1 -999014 sc-eQTL 4.56e-01 0.0663 0.0887 0.418 B_Memory L2
ENSG00000186056 MATN1-AS1 -72622 sc-eQTL 2.19e-01 -0.0934 0.0758 0.418 B_Memory L2
ENSG00000287510 AL137857.1 -85811 sc-eQTL 5.54e-01 -0.0527 0.0891 0.418 B_Memory L2
ENSG00000060688 SNRNP40 -650906 sc-eQTL 2.39e-01 0.104 0.0883 0.415 B_Naive1 L2
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 5.96e-01 0.0406 0.0764 0.415 B_Naive1 L2
ENSG00000134644 PUM1 -420109 sc-eQTL 8.10e-01 -0.0162 0.0675 0.415 B_Naive1 L2
ENSG00000162510 MATN1 -77703 sc-eQTL 2.65e-01 -0.0763 0.0683 0.415 B_Naive1 L2
ENSG00000162511 LAPTM5 -111892 sc-eQTL 5.91e-01 -0.0246 0.0457 0.415 B_Naive1 L2
ENSG00000162517 PEF1 -999014 sc-eQTL 6.83e-01 0.033 0.0806 0.415 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -72622 sc-eQTL 4.90e-02 0.118 0.0595 0.415 B_Naive1 L2
ENSG00000287510 AL137857.1 -85811 sc-eQTL 7.47e-01 -0.024 0.0742 0.415 B_Naive1 L2
ENSG00000060688 SNRNP40 -650906 sc-eQTL 3.24e-01 0.0935 0.0945 0.416 B_Naive2 L2
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 6.45e-01 0.0361 0.0782 0.416 B_Naive2 L2
ENSG00000134644 PUM1 -420109 sc-eQTL 1.78e-02 -0.18 0.0755 0.416 B_Naive2 L2
ENSG00000162510 MATN1 -77703 sc-eQTL 6.20e-01 -0.0365 0.0734 0.416 B_Naive2 L2
ENSG00000162511 LAPTM5 -111892 sc-eQTL 5.38e-01 -0.0308 0.0499 0.416 B_Naive2 L2
ENSG00000162517 PEF1 -999014 sc-eQTL 6.56e-01 0.0405 0.0907 0.416 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -72622 sc-eQTL 1.60e-01 0.102 0.0723 0.416 B_Naive2 L2
ENSG00000287510 AL137857.1 -85811 sc-eQTL 1.04e-01 0.128 0.078 0.416 B_Naive2 L2
ENSG00000060688 SNRNP40 -650906 sc-eQTL 1.11e-01 -0.152 0.0949 0.418 CD4_CTL L2
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 1.17e-02 -0.235 0.0925 0.418 CD4_CTL L2
ENSG00000134644 PUM1 -420109 sc-eQTL 2.90e-02 0.2 0.091 0.418 CD4_CTL L2
ENSG00000162511 LAPTM5 -111892 sc-eQTL 2.41e-01 0.0964 0.0819 0.418 CD4_CTL L2
ENSG00000162517 PEF1 -999014 sc-eQTL 1.03e-01 0.137 0.0836 0.418 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -72622 sc-eQTL 3.84e-01 -0.0783 0.0897 0.418 CD4_CTL L2
ENSG00000287510 AL137857.1 -85811 sc-eQTL 2.56e-01 0.0901 0.079 0.418 CD4_CTL L2
ENSG00000060688 SNRNP40 -650906 sc-eQTL 5.97e-01 -0.0397 0.075 0.415 CD4_Naive L2
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 8.47e-01 -0.0128 0.0665 0.415 CD4_Naive L2
ENSG00000134644 PUM1 -420109 sc-eQTL 4.24e-02 0.107 0.0526 0.415 CD4_Naive L2
ENSG00000162511 LAPTM5 -111892 sc-eQTL 7.16e-01 -0.0207 0.0569 0.415 CD4_Naive L2
ENSG00000162517 PEF1 -999014 sc-eQTL 7.27e-01 -0.0218 0.0624 0.415 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -72622 sc-eQTL 3.22e-01 0.0572 0.0576 0.415 CD4_Naive L2
ENSG00000287510 AL137857.1 -85811 sc-eQTL 7.83e-01 -0.0183 0.0663 0.415 CD4_Naive L2
ENSG00000060688 SNRNP40 -650906 sc-eQTL 8.35e-02 -0.16 0.0922 0.415 CD4_TCM L2
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 4.91e-01 -0.0516 0.0747 0.415 CD4_TCM L2
ENSG00000134644 PUM1 -420109 sc-eQTL 5.50e-01 0.0396 0.0662 0.415 CD4_TCM L2
ENSG00000162511 LAPTM5 -111892 sc-eQTL 9.64e-01 0.00251 0.055 0.415 CD4_TCM L2
ENSG00000162517 PEF1 -999014 sc-eQTL 3.95e-01 0.0627 0.0735 0.415 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -72622 sc-eQTL 2.81e-01 0.0751 0.0695 0.415 CD4_TCM L2
ENSG00000287510 AL137857.1 -85811 sc-eQTL 2.61e-01 0.0873 0.0774 0.415 CD4_TCM L2
ENSG00000060688 SNRNP40 -650906 sc-eQTL 9.88e-01 -0.0014 0.0922 0.415 CD4_TEM L2
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 9.38e-01 0.00681 0.0879 0.415 CD4_TEM L2
ENSG00000134644 PUM1 -420109 sc-eQTL 2.85e-01 0.0783 0.073 0.415 CD4_TEM L2
ENSG00000162511 LAPTM5 -111892 sc-eQTL 1.02e-01 0.121 0.0736 0.415 CD4_TEM L2
ENSG00000162517 PEF1 -999014 sc-eQTL 6.05e-02 0.155 0.0822 0.415 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -72622 sc-eQTL 5.69e-02 0.164 0.0859 0.415 CD4_TEM L2
ENSG00000287510 AL137857.1 -85811 sc-eQTL 8.96e-01 0.0112 0.0853 0.415 CD4_TEM L2
ENSG00000060688 SNRNP40 -650906 sc-eQTL 6.84e-01 0.0412 0.101 0.415 CD8_CTL L2
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 6.94e-01 -0.0304 0.0773 0.415 CD8_CTL L2
ENSG00000134644 PUM1 -420109 sc-eQTL 4.65e-01 0.0549 0.075 0.415 CD8_CTL L2
ENSG00000162511 LAPTM5 -111892 sc-eQTL 6.23e-01 0.041 0.0831 0.415 CD8_CTL L2
ENSG00000162517 PEF1 -999014 sc-eQTL 4.48e-02 0.145 0.0717 0.415 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -72622 sc-eQTL 8.79e-01 0.0134 0.0874 0.415 CD8_CTL L2
ENSG00000287510 AL137857.1 -85811 sc-eQTL 6.71e-01 0.035 0.0822 0.415 CD8_CTL L2
ENSG00000060688 SNRNP40 -650906 sc-eQTL 4.89e-02 0.181 0.0913 0.415 CD8_Naive L2
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 2.79e-01 -0.086 0.0792 0.415 CD8_Naive L2
ENSG00000134644 PUM1 -420109 sc-eQTL 4.51e-01 0.0482 0.0638 0.415 CD8_Naive L2
ENSG00000162511 LAPTM5 -111892 sc-eQTL 6.59e-01 -0.027 0.0612 0.415 CD8_Naive L2
ENSG00000162517 PEF1 -999014 sc-eQTL 7.19e-01 0.0306 0.0851 0.415 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -72622 sc-eQTL 9.61e-01 -0.00373 0.0765 0.415 CD8_Naive L2
ENSG00000287510 AL137857.1 -85811 sc-eQTL 1.90e-01 -0.109 0.0829 0.415 CD8_Naive L2
ENSG00000060688 SNRNP40 -650906 sc-eQTL 6.70e-01 -0.0439 0.103 0.421 CD8_TCM L2
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 7.89e-01 0.0252 0.0942 0.421 CD8_TCM L2
ENSG00000134644 PUM1 -420109 sc-eQTL 1.88e-01 0.117 0.0882 0.421 CD8_TCM L2
ENSG00000162511 LAPTM5 -111892 sc-eQTL 4.41e-01 0.0715 0.0926 0.421 CD8_TCM L2
ENSG00000162517 PEF1 -999014 sc-eQTL 1.66e-01 0.131 0.0943 0.421 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -72622 sc-eQTL 4.07e-01 -0.0712 0.0857 0.421 CD8_TCM L2
ENSG00000287510 AL137857.1 -85811 sc-eQTL 8.76e-01 -0.0136 0.0867 0.421 CD8_TCM L2
ENSG00000060688 SNRNP40 -650906 sc-eQTL 2.94e-01 0.102 0.0968 0.406 CD8_TEM L2
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 8.01e-01 0.0236 0.0931 0.406 CD8_TEM L2
ENSG00000134644 PUM1 -420109 sc-eQTL 2.72e-01 0.105 0.0949 0.406 CD8_TEM L2
ENSG00000162511 LAPTM5 -111892 sc-eQTL 8.55e-01 -0.0163 0.0895 0.406 CD8_TEM L2
ENSG00000162517 PEF1 -999014 sc-eQTL 4.41e-01 0.0649 0.0841 0.406 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -72622 sc-eQTL 8.66e-01 -0.0157 0.0929 0.406 CD8_TEM L2
ENSG00000287510 AL137857.1 -85811 sc-eQTL 3.09e-01 0.0855 0.0838 0.406 CD8_TEM L2
ENSG00000060688 SNRNP40 -650906 sc-eQTL 2.51e-02 0.22 0.0975 0.418 MAIT L2
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 1.71e-01 -0.12 0.087 0.418 MAIT L2
ENSG00000134644 PUM1 -420109 sc-eQTL 7.32e-01 0.0287 0.0838 0.418 MAIT L2
ENSG00000162511 LAPTM5 -111892 sc-eQTL 9.12e-01 0.00879 0.079 0.418 MAIT L2
ENSG00000162517 PEF1 -999014 sc-eQTL 8.44e-01 -0.0171 0.0869 0.418 MAIT L2
ENSG00000186056 MATN1-AS1 -72622 sc-eQTL 7.66e-01 0.0262 0.088 0.418 MAIT L2
ENSG00000287510 AL137857.1 -85811 sc-eQTL 7.08e-03 -0.243 0.0892 0.418 MAIT L2
ENSG00000060688 SNRNP40 -650906 sc-eQTL 3.97e-01 0.0842 0.0992 0.418 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 2.23e-01 0.102 0.0836 0.418 NK_CD56bright L2
ENSG00000134644 PUM1 -420109 sc-eQTL 7.76e-02 -0.155 0.0875 0.418 NK_CD56bright L2
ENSG00000162511 LAPTM5 -111892 sc-eQTL 3.32e-01 0.0844 0.0867 0.418 NK_CD56bright L2
ENSG00000162517 PEF1 -999014 sc-eQTL 7.88e-01 -0.0227 0.0844 0.418 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -72622 sc-eQTL 5.80e-02 -0.165 0.0866 0.418 NK_CD56bright L2
ENSG00000287510 AL137857.1 -85811 sc-eQTL 9.09e-01 -0.00987 0.0861 0.418 NK_CD56bright L2
ENSG00000060688 SNRNP40 -650906 sc-eQTL 2.62e-01 0.106 0.0939 0.414 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 4.88e-01 -0.0483 0.0695 0.414 NK_CD56dim L2
ENSG00000134644 PUM1 -420109 sc-eQTL 9.92e-01 -0.000739 0.0714 0.414 NK_CD56dim L2
ENSG00000162511 LAPTM5 -111892 sc-eQTL 1.82e-01 0.102 0.0759 0.414 NK_CD56dim L2
ENSG00000162517 PEF1 -999014 sc-eQTL 7.89e-01 0.0182 0.0678 0.414 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -72622 sc-eQTL 5.35e-01 -0.0592 0.0953 0.414 NK_CD56dim L2
ENSG00000287510 AL137857.1 -85811 sc-eQTL 2.11e-01 0.0984 0.0784 0.414 NK_CD56dim L2
ENSG00000060688 SNRNP40 -650906 sc-eQTL 6.54e-01 0.0447 0.0996 0.411 NK_HLA L2
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 5.73e-01 -0.0502 0.0889 0.411 NK_HLA L2
ENSG00000134644 PUM1 -420109 sc-eQTL 4.80e-01 -0.0613 0.0866 0.411 NK_HLA L2
ENSG00000162511 LAPTM5 -111892 sc-eQTL 3.47e-02 0.174 0.0818 0.411 NK_HLA L2
ENSG00000162517 PEF1 -999014 sc-eQTL 3.99e-01 0.0787 0.093 0.411 NK_HLA L2
ENSG00000186056 MATN1-AS1 -72622 sc-eQTL 9.43e-01 -0.00634 0.088 0.411 NK_HLA L2
ENSG00000287510 AL137857.1 -85811 sc-eQTL 1.22e-01 0.131 0.0846 0.411 NK_HLA L2
ENSG00000060688 SNRNP40 -650906 sc-eQTL 8.94e-01 -0.0122 0.0911 0.414 NK_cytokine L2
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 3.94e-01 -0.0606 0.071 0.414 NK_cytokine L2
ENSG00000134644 PUM1 -420109 sc-eQTL 4.83e-01 -0.054 0.0768 0.414 NK_cytokine L2
ENSG00000162511 LAPTM5 -111892 sc-eQTL 5.16e-02 0.164 0.0839 0.414 NK_cytokine L2
ENSG00000162517 PEF1 -999014 sc-eQTL 6.76e-01 0.0301 0.0721 0.414 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -72622 sc-eQTL 8.96e-01 0.0118 0.0897 0.414 NK_cytokine L2
ENSG00000287510 AL137857.1 -85811 sc-eQTL 1.61e-01 -0.117 0.0831 0.414 NK_cytokine L2
ENSG00000060688 SNRNP40 -650906 sc-eQTL 9.75e-02 0.18 0.108 0.407 PB L2
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 2.15e-01 -0.157 0.126 0.407 PB L2
ENSG00000134644 PUM1 -420109 sc-eQTL 2.98e-01 0.114 0.109 0.407 PB L2
ENSG00000162510 MATN1 -77703 sc-eQTL 8.02e-01 -0.0258 0.102 0.407 PB L2
ENSG00000162511 LAPTM5 -111892 sc-eQTL 7.06e-01 -0.0277 0.0731 0.407 PB L2
ENSG00000162517 PEF1 -999014 sc-eQTL 9.81e-02 0.186 0.111 0.407 PB L2
ENSG00000186056 MATN1-AS1 -72622 sc-eQTL 4.67e-01 0.0729 0.0999 0.407 PB L2
ENSG00000287510 AL137857.1 -85811 sc-eQTL 6.67e-01 -0.046 0.107 0.407 PB L2
ENSG00000060688 SNRNP40 -650906 sc-eQTL 1.96e-02 0.167 0.071 0.417 Pro_T L2
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 9.18e-01 -0.00936 0.0913 0.417 Pro_T L2
ENSG00000134644 PUM1 -420109 sc-eQTL 5.82e-01 0.047 0.0851 0.417 Pro_T L2
ENSG00000162511 LAPTM5 -111892 sc-eQTL 3.36e-01 0.0588 0.061 0.417 Pro_T L2
ENSG00000162517 PEF1 -999014 sc-eQTL 7.02e-01 0.0343 0.0896 0.417 Pro_T L2
ENSG00000186056 MATN1-AS1 -72622 sc-eQTL 9.99e-01 -8.01e-05 0.0854 0.417 Pro_T L2
ENSG00000287510 AL137857.1 -85811 sc-eQTL 3.62e-01 -0.0716 0.0784 0.417 Pro_T L2
ENSG00000060688 SNRNP40 -650906 sc-eQTL 8.25e-01 0.0213 0.0959 0.415 Treg L2
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 5.24e-01 0.0592 0.0927 0.415 Treg L2
ENSG00000134644 PUM1 -420109 sc-eQTL 7.34e-01 0.0252 0.0742 0.415 Treg L2
ENSG00000162511 LAPTM5 -111892 sc-eQTL 5.25e-01 0.0541 0.085 0.415 Treg L2
ENSG00000162517 PEF1 -999014 sc-eQTL 9.17e-01 -0.00955 0.0918 0.415 Treg L2
ENSG00000186056 MATN1-AS1 -72622 sc-eQTL 6.62e-01 -0.0379 0.0866 0.415 Treg L2
ENSG00000287510 AL137857.1 -85811 sc-eQTL 9.99e-02 0.142 0.086 0.415 Treg L2
ENSG00000060688 SNRNP40 -650906 sc-eQTL 9.05e-01 0.0116 0.0973 0.429 cDC L2
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 5.25e-01 0.0669 0.105 0.429 cDC L2
ENSG00000134644 PUM1 -420109 sc-eQTL 4.35e-01 -0.0707 0.0903 0.429 cDC L2
ENSG00000162511 LAPTM5 -111892 sc-eQTL 6.57e-01 0.0282 0.0634 0.429 cDC L2
ENSG00000162517 PEF1 -999014 sc-eQTL 4.25e-01 0.0733 0.0917 0.429 cDC L2
ENSG00000168528 SERINC2 -763683 sc-eQTL 5.26e-01 0.0517 0.0813 0.429 cDC L2
ENSG00000284543 LINC01226 -860344 sc-eQTL 6.25e-01 0.0392 0.08 0.429 cDC L2
ENSG00000287510 AL137857.1 -85811 sc-eQTL 7.37e-01 -0.029 0.0861 0.429 cDC L2
ENSG00000060688 SNRNP40 -650906 sc-eQTL 3.71e-01 -0.0689 0.0768 0.415 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 3.75e-01 -0.0761 0.0857 0.415 cMono_IL1B L2
ENSG00000134644 PUM1 -420109 sc-eQTL 6.90e-01 -0.0232 0.0581 0.415 cMono_IL1B L2
ENSG00000162511 LAPTM5 -111892 sc-eQTL 6.09e-01 0.0261 0.0509 0.415 cMono_IL1B L2
ENSG00000162512 SDC3 -262876 sc-eQTL 9.40e-01 -0.00721 0.096 0.415 cMono_IL1B L2
ENSG00000162517 PEF1 -999014 sc-eQTL 3.87e-02 0.162 0.0777 0.415 cMono_IL1B L2
ENSG00000168528 SERINC2 -763683 sc-eQTL 2.23e-01 0.118 0.0969 0.415 cMono_IL1B L2
ENSG00000284543 LINC01226 -860344 sc-eQTL 6.03e-01 -0.0447 0.0859 0.415 cMono_IL1B L2
ENSG00000287510 AL137857.1 -85811 sc-eQTL 8.33e-01 -0.017 0.0801 0.415 cMono_IL1B L2
ENSG00000060688 SNRNP40 -650906 sc-eQTL 7.54e-02 -0.144 0.0805 0.415 cMono_S100A L2
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 5.86e-01 -0.0522 0.0958 0.415 cMono_S100A L2
ENSG00000134644 PUM1 -420109 sc-eQTL 6.99e-01 -0.0268 0.0692 0.415 cMono_S100A L2
ENSG00000162511 LAPTM5 -111892 sc-eQTL 2.65e-01 0.0593 0.0531 0.415 cMono_S100A L2
ENSG00000162512 SDC3 -262876 sc-eQTL 2.09e-01 -0.115 0.0916 0.415 cMono_S100A L2
ENSG00000162517 PEF1 -999014 sc-eQTL 1.28e-01 0.126 0.0826 0.415 cMono_S100A L2
ENSG00000168528 SERINC2 -763683 sc-eQTL 7.87e-02 0.171 0.0966 0.415 cMono_S100A L2
ENSG00000284543 LINC01226 -860344 sc-eQTL 3.42e-01 -0.0751 0.0789 0.415 cMono_S100A L2
ENSG00000287510 AL137857.1 -85811 sc-eQTL 5.46e-01 -0.048 0.0793 0.415 cMono_S100A L2
ENSG00000060688 SNRNP40 -650906 sc-eQTL 5.14e-01 0.081 0.124 0.415 gdT L2
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 8.79e-02 0.181 0.105 0.415 gdT L2
ENSG00000134644 PUM1 -420109 sc-eQTL 5.84e-01 0.0602 0.11 0.415 gdT L2
ENSG00000162511 LAPTM5 -111892 sc-eQTL 3.31e-01 -0.116 0.119 0.415 gdT L2
ENSG00000162517 PEF1 -999014 sc-eQTL 5.50e-01 -0.0652 0.109 0.415 gdT L2
ENSG00000186056 MATN1-AS1 -72622 sc-eQTL 5.36e-01 -0.0682 0.11 0.415 gdT L2
ENSG00000287510 AL137857.1 -85811 sc-eQTL 4.14e-01 -0.087 0.106 0.415 gdT L2
ENSG00000060688 SNRNP40 -650906 sc-eQTL 7.13e-01 0.033 0.0897 0.418 intMono L2
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 2.11e-01 0.121 0.0961 0.418 intMono L2
ENSG00000134644 PUM1 -420109 sc-eQTL 3.90e-01 -0.0703 0.0817 0.418 intMono L2
ENSG00000162511 LAPTM5 -111892 sc-eQTL 3.28e-01 0.0628 0.0641 0.418 intMono L2
ENSG00000162512 SDC3 -262876 sc-eQTL 5.12e-01 -0.0577 0.0878 0.418 intMono L2
ENSG00000162517 PEF1 -999014 sc-eQTL 1.04e-01 0.15 0.0918 0.418 intMono L2
ENSG00000168528 SERINC2 -763683 sc-eQTL 1.20e-02 0.23 0.0906 0.418 intMono L2
ENSG00000284543 LINC01226 -860344 sc-eQTL 2.80e-01 -0.0943 0.087 0.418 intMono L2
ENSG00000287510 AL137857.1 -85811 sc-eQTL 2.53e-01 -0.0996 0.087 0.418 intMono L2
ENSG00000060688 SNRNP40 -650906 sc-eQTL 4.70e-01 0.0614 0.0849 0.421 ncMono L2
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 4.07e-01 -0.0751 0.0904 0.421 ncMono L2
ENSG00000134644 PUM1 -420109 sc-eQTL 1.83e-01 0.0984 0.0737 0.421 ncMono L2
ENSG00000162511 LAPTM5 -111892 sc-eQTL 9.57e-01 0.00362 0.0672 0.421 ncMono L2
ENSG00000162512 SDC3 -262876 sc-eQTL 6.50e-01 -0.0343 0.0753 0.421 ncMono L2
ENSG00000162517 PEF1 -999014 sc-eQTL 7.25e-01 -0.0305 0.0864 0.421 ncMono L2
ENSG00000168528 SERINC2 -763683 sc-eQTL 1.13e-01 0.13 0.0817 0.421 ncMono L2
ENSG00000284543 LINC01226 -860344 sc-eQTL 3.47e-01 -0.0773 0.082 0.421 ncMono L2
ENSG00000287510 AL137857.1 -85811 sc-eQTL 1.91e-01 0.111 0.0848 0.421 ncMono L2
ENSG00000060688 SNRNP40 -650906 sc-eQTL 1.75e-01 -0.128 0.0942 0.441 pDC L2
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 2.95e-01 -0.109 0.104 0.441 pDC L2
ENSG00000134644 PUM1 -420109 sc-eQTL 4.60e-02 -0.171 0.0851 0.441 pDC L2
ENSG00000162511 LAPTM5 -111892 sc-eQTL 4.45e-01 -0.0613 0.08 0.441 pDC L2
ENSG00000162517 PEF1 -999014 sc-eQTL 5.40e-01 0.0638 0.104 0.441 pDC L2
ENSG00000168528 SERINC2 -763683 sc-eQTL 4.41e-01 -0.075 0.097 0.441 pDC L2
ENSG00000284543 LINC01226 -860344 sc-eQTL 8.92e-02 -0.128 0.0748 0.441 pDC L2
ENSG00000287510 AL137857.1 -85811 sc-eQTL 9.82e-01 0.00204 0.0888 0.441 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -650906 sc-eQTL 5.57e-01 0.0569 0.0967 0.415 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 8.23e-01 -0.018 0.0806 0.415 B_Memory LOneK1K
ENSG00000134644 PUM1 -420109 sc-eQTL 6.43e-01 -0.0331 0.0714 0.415 B_Memory LOneK1K
ENSG00000162510 MATN1 -77703 sc-eQTL 1.46e-01 -0.118 0.081 0.415 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -111892 sc-eQTL 6.57e-01 -0.0227 0.0511 0.415 B_Memory LOneK1K
ENSG00000162517 PEF1 -999014 sc-eQTL 1.86e-01 0.112 0.0844 0.415 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -72622 sc-eQTL 2.70e-01 0.0747 0.0675 0.415 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -85811 sc-eQTL 5.60e-01 0.043 0.0737 0.415 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -650906 sc-eQTL 1.17e-01 0.135 0.0861 0.415 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 5.04e-01 0.0457 0.0684 0.415 B_Naive LOneK1K
ENSG00000134644 PUM1 -420109 sc-eQTL 1.13e-01 -0.103 0.0644 0.415 B_Naive LOneK1K
ENSG00000162510 MATN1 -77703 sc-eQTL 2.08e-01 -0.0784 0.0621 0.415 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -111892 sc-eQTL 5.12e-01 -0.0288 0.0438 0.415 B_Naive LOneK1K
ENSG00000162517 PEF1 -999014 sc-eQTL 5.98e-01 0.0422 0.0801 0.415 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -72622 sc-eQTL 3.80e-02 0.117 0.0561 0.415 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -85811 sc-eQTL 8.29e-01 0.0146 0.0673 0.415 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -650906 sc-eQTL 3.17e-02 -0.157 0.0726 0.415 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 2.92e-01 -0.0875 0.0829 0.415 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -420109 sc-eQTL 2.56e-01 -0.0602 0.0529 0.415 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -111892 sc-eQTL 2.52e-01 0.0534 0.0465 0.415 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -262876 sc-eQTL 6.26e-01 -0.0463 0.0951 0.415 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -999014 sc-eQTL 6.69e-02 0.122 0.0663 0.415 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -763683 sc-eQTL 2.15e-01 0.121 0.0975 0.415 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -860344 sc-eQTL 5.61e-01 -0.0466 0.0801 0.415 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -85811 sc-eQTL 8.35e-01 -0.0157 0.0751 0.415 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -650906 sc-eQTL 2.25e-01 0.0979 0.0805 0.416 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 9.83e-01 -0.00191 0.0884 0.416 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -420109 sc-eQTL 7.26e-01 0.0254 0.0724 0.416 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -111892 sc-eQTL 9.03e-01 0.0071 0.0579 0.416 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -262876 sc-eQTL 7.53e-01 -0.0267 0.0846 0.416 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -999014 sc-eQTL 8.33e-01 -0.0163 0.0769 0.416 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -763683 sc-eQTL 2.63e-02 0.194 0.0867 0.416 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -860344 sc-eQTL 1.08e-01 -0.133 0.0828 0.416 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -85811 sc-eQTL 9.64e-01 0.00376 0.0834 0.416 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -650906 sc-eQTL 3.34e-01 0.0868 0.0896 0.414 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -651100 sc-eQTL 5.70e-01 -0.0348 0.0613 0.414 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -420109 sc-eQTL 4.40e-01 -0.0519 0.0671 0.414 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -111892 sc-eQTL 3.12e-02 0.161 0.0742 0.414 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -999014 sc-eQTL 6.11e-01 0.029 0.057 0.414 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -72622 sc-eQTL 8.17e-01 -0.0201 0.0866 0.414 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -85811 sc-eQTL 4.12e-01 0.0613 0.0746 0.414 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162511 LAPTM5 -111892 eQTL 0.0256 -0.0216 0.00969 0.00161 0.0 0.43

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina