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Genes within 1Mb (chr1:30643966:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -652822 sc-eQTL 2.31e-01 -0.0924 0.077 0.402 B L1
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 5.94e-01 -0.033 0.0618 0.402 B L1
ENSG00000134644 PUM1 -422025 sc-eQTL 7.09e-01 -0.0194 0.0519 0.402 B L1
ENSG00000162510 MATN1 -79619 sc-eQTL 6.99e-01 0.0211 0.0545 0.402 B L1
ENSG00000162511 LAPTM5 -113808 sc-eQTL 9.54e-01 0.00249 0.0427 0.402 B L1
ENSG00000186056 MATN1-AS1 -74538 sc-eQTL 8.51e-01 -0.00944 0.0501 0.402 B L1
ENSG00000287510 AL137857.1 -87727 sc-eQTL 3.02e-01 -0.0612 0.0591 0.402 B L1
ENSG00000060688 SNRNP40 -652822 sc-eQTL 4.15e-01 -0.0543 0.0666 0.402 CD4T L1
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 5.17e-01 -0.0337 0.052 0.402 CD4T L1
ENSG00000134644 PUM1 -422025 sc-eQTL 8.36e-01 0.00963 0.0464 0.402 CD4T L1
ENSG00000162511 LAPTM5 -113808 sc-eQTL 1.26e-01 -0.0786 0.0511 0.402 CD4T L1
ENSG00000186056 MATN1-AS1 -74538 sc-eQTL 6.07e-01 -0.0237 0.0459 0.402 CD4T L1
ENSG00000287510 AL137857.1 -87727 sc-eQTL 9.59e-01 -0.00286 0.0551 0.402 CD4T L1
ENSG00000060688 SNRNP40 -652822 sc-eQTL 4.75e-01 -0.0627 0.0877 0.402 CD8T L1
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 7.43e-01 -0.0191 0.0584 0.402 CD8T L1
ENSG00000134644 PUM1 -422025 sc-eQTL 6.60e-01 -0.0227 0.0514 0.402 CD8T L1
ENSG00000162511 LAPTM5 -113808 sc-eQTL 4.98e-01 -0.0339 0.0499 0.402 CD8T L1
ENSG00000186056 MATN1-AS1 -74538 sc-eQTL 2.17e-01 0.0722 0.0583 0.402 CD8T L1
ENSG00000287510 AL137857.1 -87727 sc-eQTL 6.79e-01 0.0305 0.0735 0.402 CD8T L1
ENSG00000060688 SNRNP40 -652822 sc-eQTL 7.46e-01 0.0249 0.0768 0.396 DC L1
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 4.10e-01 0.075 0.0908 0.396 DC L1
ENSG00000134644 PUM1 -422025 sc-eQTL 7.70e-01 0.0208 0.0712 0.396 DC L1
ENSG00000162511 LAPTM5 -113808 sc-eQTL 1.02e-01 -0.083 0.0505 0.396 DC L1
ENSG00000168528 SERINC2 -765599 sc-eQTL 7.53e-02 -0.149 0.0832 0.396 DC L1
ENSG00000284543 LINC01226 -862260 sc-eQTL 6.75e-01 -0.0233 0.0556 0.396 DC L1
ENSG00000287510 AL137857.1 -87727 sc-eQTL 4.27e-02 -0.162 0.0796 0.396 DC L1
ENSG00000060688 SNRNP40 -652822 sc-eQTL 6.06e-01 -0.031 0.06 0.402 Mono L1
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 9.45e-01 -0.00514 0.0744 0.402 Mono L1
ENSG00000134644 PUM1 -422025 sc-eQTL 8.03e-01 -0.0119 0.0477 0.402 Mono L1
ENSG00000162511 LAPTM5 -113808 sc-eQTL 4.22e-02 -0.0888 0.0434 0.402 Mono L1
ENSG00000162512 SDC3 -264792 sc-eQTL 9.99e-01 -0.000107 0.0843 0.402 Mono L1
ENSG00000168528 SERINC2 -765599 sc-eQTL 1.28e-02 -0.224 0.0891 0.402 Mono L1
ENSG00000284543 LINC01226 -862260 sc-eQTL 6.97e-01 -0.031 0.0796 0.402 Mono L1
ENSG00000287510 AL137857.1 -87727 sc-eQTL 9.98e-01 0.000195 0.0696 0.402 Mono L1
ENSG00000060688 SNRNP40 -652822 sc-eQTL 2.51e-01 -0.0998 0.0866 0.403 NK L1
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 8.24e-01 -0.0133 0.0595 0.403 NK L1
ENSG00000134644 PUM1 -422025 sc-eQTL 9.75e-01 -0.00196 0.0624 0.403 NK L1
ENSG00000162511 LAPTM5 -113808 sc-eQTL 7.63e-01 -0.0217 0.0718 0.403 NK L1
ENSG00000186056 MATN1-AS1 -74538 sc-eQTL 9.61e-01 -0.00392 0.0807 0.403 NK L1
ENSG00000287510 AL137857.1 -87727 sc-eQTL 2.52e-01 -0.0854 0.0743 0.403 NK L1
ENSG00000060688 SNRNP40 -652822 sc-eQTL 4.71e-01 0.0457 0.0633 0.402 Other_T L1
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 6.15e-01 0.0341 0.0677 0.402 Other_T L1
ENSG00000134644 PUM1 -422025 sc-eQTL 8.05e-01 -0.0151 0.0609 0.402 Other_T L1
ENSG00000162511 LAPTM5 -113808 sc-eQTL 1.33e-01 -0.0749 0.0497 0.402 Other_T L1
ENSG00000186056 MATN1-AS1 -74538 sc-eQTL 6.59e-01 0.0361 0.0817 0.402 Other_T L1
ENSG00000287510 AL137857.1 -87727 sc-eQTL 8.32e-01 0.0181 0.0852 0.402 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -652822 sc-eQTL 3.38e-01 0.0985 0.103 0.403 B_Activated L2
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 4.25e-01 0.0828 0.104 0.403 B_Activated L2
ENSG00000134644 PUM1 -422025 sc-eQTL 5.00e-01 -0.0651 0.0963 0.403 B_Activated L2
ENSG00000162510 MATN1 -79619 sc-eQTL 2.60e-01 -0.0948 0.0839 0.403 B_Activated L2
ENSG00000162511 LAPTM5 -113808 sc-eQTL 2.24e-01 0.0715 0.0585 0.403 B_Activated L2
ENSG00000186056 MATN1-AS1 -74538 sc-eQTL 4.56e-01 -0.0708 0.0947 0.403 B_Activated L2
ENSG00000287510 AL137857.1 -87727 sc-eQTL 7.51e-01 0.0266 0.0839 0.403 B_Activated L2
ENSG00000060688 SNRNP40 -652822 sc-eQTL 7.13e-01 0.0346 0.094 0.399 B_Intermediate L2
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 4.12e-01 -0.0643 0.0782 0.399 B_Intermediate L2
ENSG00000134644 PUM1 -422025 sc-eQTL 7.64e-01 -0.0222 0.0739 0.399 B_Intermediate L2
ENSG00000162510 MATN1 -79619 sc-eQTL 2.83e-01 0.0825 0.0767 0.399 B_Intermediate L2
ENSG00000162511 LAPTM5 -113808 sc-eQTL 6.61e-01 -0.0207 0.0472 0.399 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -74538 sc-eQTL 7.85e-01 -0.0181 0.0662 0.399 B_Intermediate L2
ENSG00000287510 AL137857.1 -87727 sc-eQTL 3.18e-01 -0.074 0.0739 0.399 B_Intermediate L2
ENSG00000060688 SNRNP40 -652822 sc-eQTL 9.08e-01 -0.0108 0.093 0.401 B_Memory L2
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 6.77e-01 0.0357 0.0857 0.401 B_Memory L2
ENSG00000134644 PUM1 -422025 sc-eQTL 1.40e-01 -0.11 0.0742 0.401 B_Memory L2
ENSG00000162510 MATN1 -79619 sc-eQTL 3.84e-01 -0.0621 0.0712 0.401 B_Memory L2
ENSG00000162511 LAPTM5 -113808 sc-eQTL 8.79e-01 -0.00967 0.0633 0.401 B_Memory L2
ENSG00000186056 MATN1-AS1 -74538 sc-eQTL 3.62e-01 0.066 0.0722 0.401 B_Memory L2
ENSG00000287510 AL137857.1 -87727 sc-eQTL 4.20e-01 0.0683 0.0846 0.401 B_Memory L2
ENSG00000060688 SNRNP40 -652822 sc-eQTL 1.41e-01 -0.122 0.0826 0.402 B_Naive1 L2
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 8.23e-01 -0.016 0.0716 0.402 B_Naive1 L2
ENSG00000134644 PUM1 -422025 sc-eQTL 5.61e-01 0.0368 0.0632 0.402 B_Naive1 L2
ENSG00000162510 MATN1 -79619 sc-eQTL 8.95e-01 0.00847 0.0641 0.402 B_Naive1 L2
ENSG00000162511 LAPTM5 -113808 sc-eQTL 3.41e-01 -0.0408 0.0427 0.402 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -74538 sc-eQTL 8.51e-01 -0.0106 0.0563 0.402 B_Naive1 L2
ENSG00000287510 AL137857.1 -87727 sc-eQTL 2.63e-01 -0.0777 0.0693 0.402 B_Naive1 L2
ENSG00000060688 SNRNP40 -652822 sc-eQTL 8.12e-01 0.0212 0.0889 0.401 B_Naive2 L2
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 6.12e-01 -0.0373 0.0733 0.401 B_Naive2 L2
ENSG00000134644 PUM1 -422025 sc-eQTL 8.02e-01 -0.018 0.0718 0.401 B_Naive2 L2
ENSG00000162510 MATN1 -79619 sc-eQTL 8.29e-01 0.0149 0.0689 0.401 B_Naive2 L2
ENSG00000162511 LAPTM5 -113808 sc-eQTL 9.40e-01 -0.00351 0.0468 0.401 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -74538 sc-eQTL 1.88e-01 -0.0897 0.0679 0.401 B_Naive2 L2
ENSG00000287510 AL137857.1 -87727 sc-eQTL 3.41e-01 -0.0701 0.0735 0.401 B_Naive2 L2
ENSG00000060688 SNRNP40 -652822 sc-eQTL 2.71e-01 -0.0976 0.0884 0.398 CD4_CTL L2
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 5.79e-02 -0.165 0.0864 0.398 CD4_CTL L2
ENSG00000134644 PUM1 -422025 sc-eQTL 2.76e-01 -0.0931 0.0853 0.398 CD4_CTL L2
ENSG00000162511 LAPTM5 -113808 sc-eQTL 9.30e-01 -0.00674 0.0762 0.398 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -74538 sc-eQTL 9.69e-01 0.00322 0.0834 0.398 CD4_CTL L2
ENSG00000287510 AL137857.1 -87727 sc-eQTL 3.33e-01 -0.0713 0.0734 0.398 CD4_CTL L2
ENSG00000060688 SNRNP40 -652822 sc-eQTL 1.78e-01 -0.093 0.0687 0.402 CD4_Naive L2
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 2.62e-01 -0.0686 0.061 0.402 CD4_Naive L2
ENSG00000134644 PUM1 -422025 sc-eQTL 7.98e-01 0.0125 0.0488 0.402 CD4_Naive L2
ENSG00000162511 LAPTM5 -113808 sc-eQTL 7.13e-02 -0.0941 0.0519 0.402 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -74538 sc-eQTL 7.94e-01 -0.0139 0.0531 0.402 CD4_Naive L2
ENSG00000287510 AL137857.1 -87727 sc-eQTL 9.26e-01 -0.00566 0.061 0.402 CD4_Naive L2
ENSG00000060688 SNRNP40 -652822 sc-eQTL 2.88e-01 0.0936 0.0878 0.402 CD4_TCM L2
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 2.37e-01 0.084 0.0708 0.402 CD4_TCM L2
ENSG00000134644 PUM1 -422025 sc-eQTL 6.64e-01 0.0273 0.0628 0.402 CD4_TCM L2
ENSG00000162511 LAPTM5 -113808 sc-eQTL 8.15e-02 -0.0906 0.0518 0.402 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -74538 sc-eQTL 5.99e-01 -0.0348 0.0661 0.402 CD4_TCM L2
ENSG00000287510 AL137857.1 -87727 sc-eQTL 9.94e-01 0.000545 0.0737 0.402 CD4_TCM L2
ENSG00000060688 SNRNP40 -652822 sc-eQTL 9.60e-01 0.00438 0.0871 0.402 CD4_TEM L2
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 2.03e-01 -0.106 0.0826 0.402 CD4_TEM L2
ENSG00000134644 PUM1 -422025 sc-eQTL 2.24e-01 -0.084 0.0689 0.402 CD4_TEM L2
ENSG00000162511 LAPTM5 -113808 sc-eQTL 5.50e-01 -0.0418 0.0698 0.402 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -74538 sc-eQTL 6.37e-01 -0.0386 0.0817 0.402 CD4_TEM L2
ENSG00000287510 AL137857.1 -87727 sc-eQTL 9.89e-02 -0.133 0.0801 0.402 CD4_TEM L2
ENSG00000060688 SNRNP40 -652822 sc-eQTL 8.29e-01 -0.0203 0.0936 0.402 CD8_CTL L2
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 3.51e-01 -0.0669 0.0716 0.402 CD8_CTL L2
ENSG00000134644 PUM1 -422025 sc-eQTL 9.62e-01 -0.00328 0.0697 0.402 CD8_CTL L2
ENSG00000162511 LAPTM5 -113808 sc-eQTL 7.56e-01 -0.024 0.0771 0.402 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -74538 sc-eQTL 3.23e-01 0.0802 0.0809 0.402 CD8_CTL L2
ENSG00000287510 AL137857.1 -87727 sc-eQTL 2.16e-01 0.0944 0.076 0.402 CD8_CTL L2
ENSG00000060688 SNRNP40 -652822 sc-eQTL 1.15e-01 -0.137 0.0869 0.402 CD8_Naive L2
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 6.90e-01 0.0301 0.0753 0.402 CD8_Naive L2
ENSG00000134644 PUM1 -422025 sc-eQTL 1.62e-01 -0.0848 0.0604 0.402 CD8_Naive L2
ENSG00000162511 LAPTM5 -113808 sc-eQTL 5.76e-02 -0.11 0.0576 0.402 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -74538 sc-eQTL 2.73e-01 0.0795 0.0723 0.402 CD8_Naive L2
ENSG00000287510 AL137857.1 -87727 sc-eQTL 4.31e-01 -0.0622 0.0789 0.402 CD8_Naive L2
ENSG00000060688 SNRNP40 -652822 sc-eQTL 2.69e-01 0.106 0.096 0.396 CD8_TCM L2
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 1.18e-01 0.138 0.0877 0.396 CD8_TCM L2
ENSG00000134644 PUM1 -422025 sc-eQTL 2.52e-01 0.0951 0.0827 0.396 CD8_TCM L2
ENSG00000162511 LAPTM5 -113808 sc-eQTL 7.88e-01 -0.0233 0.0868 0.396 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -74538 sc-eQTL 8.62e-01 0.014 0.0804 0.396 CD8_TCM L2
ENSG00000287510 AL137857.1 -87727 sc-eQTL 1.40e-01 0.12 0.0808 0.396 CD8_TCM L2
ENSG00000060688 SNRNP40 -652822 sc-eQTL 7.06e-01 0.0343 0.0908 0.4 CD8_TEM L2
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 4.93e-01 -0.0597 0.0869 0.4 CD8_TEM L2
ENSG00000134644 PUM1 -422025 sc-eQTL 5.06e-01 -0.0592 0.0889 0.4 CD8_TEM L2
ENSG00000162511 LAPTM5 -113808 sc-eQTL 1.88e-01 0.11 0.0833 0.4 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -74538 sc-eQTL 7.94e-01 -0.0227 0.0868 0.4 CD8_TEM L2
ENSG00000287510 AL137857.1 -87727 sc-eQTL 7.32e-01 -0.0269 0.0786 0.4 CD8_TEM L2
ENSG00000060688 SNRNP40 -652822 sc-eQTL 1.20e-01 0.143 0.092 0.398 MAIT L2
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 4.62e-01 -0.0603 0.0819 0.398 MAIT L2
ENSG00000134644 PUM1 -422025 sc-eQTL 4.17e-01 0.0639 0.0784 0.398 MAIT L2
ENSG00000162511 LAPTM5 -113808 sc-eQTL 2.92e-02 -0.161 0.0733 0.398 MAIT L2
ENSG00000186056 MATN1-AS1 -74538 sc-eQTL 5.37e-01 0.0509 0.0825 0.398 MAIT L2
ENSG00000287510 AL137857.1 -87727 sc-eQTL 9.98e-01 0.000165 0.0851 0.398 MAIT L2
ENSG00000060688 SNRNP40 -652822 sc-eQTL 2.60e-01 -0.108 0.0952 0.393 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 3.28e-01 -0.0789 0.0805 0.393 NK_CD56bright L2
ENSG00000134644 PUM1 -422025 sc-eQTL 9.36e-01 -0.00678 0.0848 0.393 NK_CD56bright L2
ENSG00000162511 LAPTM5 -113808 sc-eQTL 7.19e-01 -0.0301 0.0836 0.393 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -74538 sc-eQTL 2.95e-02 0.182 0.0831 0.393 NK_CD56bright L2
ENSG00000287510 AL137857.1 -87727 sc-eQTL 7.68e-02 -0.146 0.0822 0.393 NK_CD56bright L2
ENSG00000060688 SNRNP40 -652822 sc-eQTL 4.90e-01 -0.0627 0.0906 0.403 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 3.13e-01 0.0676 0.0669 0.403 NK_CD56dim L2
ENSG00000134644 PUM1 -422025 sc-eQTL 9.45e-01 -0.00479 0.0688 0.403 NK_CD56dim L2
ENSG00000162511 LAPTM5 -113808 sc-eQTL 7.11e-01 -0.0273 0.0734 0.403 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -74538 sc-eQTL 9.88e-01 -0.00142 0.0919 0.403 NK_CD56dim L2
ENSG00000287510 AL137857.1 -87727 sc-eQTL 1.68e-01 -0.105 0.0755 0.403 NK_CD56dim L2
ENSG00000060688 SNRNP40 -652822 sc-eQTL 1.33e-01 0.142 0.0942 0.4 NK_HLA L2
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 6.83e-01 0.0346 0.0846 0.4 NK_HLA L2
ENSG00000134644 PUM1 -422025 sc-eQTL 9.86e-01 0.00147 0.0825 0.4 NK_HLA L2
ENSG00000162511 LAPTM5 -113808 sc-eQTL 5.83e-01 -0.0433 0.0787 0.4 NK_HLA L2
ENSG00000186056 MATN1-AS1 -74538 sc-eQTL 9.07e-01 0.00976 0.0837 0.4 NK_HLA L2
ENSG00000287510 AL137857.1 -87727 sc-eQTL 3.57e-01 -0.0746 0.0808 0.4 NK_HLA L2
ENSG00000060688 SNRNP40 -652822 sc-eQTL 4.16e-01 -0.0699 0.0858 0.403 NK_cytokine L2
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 3.29e-01 -0.0654 0.0669 0.403 NK_cytokine L2
ENSG00000134644 PUM1 -422025 sc-eQTL 9.12e-01 0.00802 0.0725 0.403 NK_cytokine L2
ENSG00000162511 LAPTM5 -113808 sc-eQTL 5.62e-01 -0.0464 0.0798 0.403 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -74538 sc-eQTL 8.15e-01 0.0198 0.0846 0.403 NK_cytokine L2
ENSG00000287510 AL137857.1 -87727 sc-eQTL 9.24e-01 -0.0075 0.0787 0.403 NK_cytokine L2
ENSG00000060688 SNRNP40 -652822 sc-eQTL 6.44e-01 -0.0457 0.0987 0.411 PB L2
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 2.31e-01 0.137 0.114 0.411 PB L2
ENSG00000134644 PUM1 -422025 sc-eQTL 8.43e-01 -0.0197 0.0995 0.411 PB L2
ENSG00000162510 MATN1 -79619 sc-eQTL 3.05e-01 0.0951 0.0923 0.411 PB L2
ENSG00000162511 LAPTM5 -113808 sc-eQTL 6.94e-01 -0.0262 0.0662 0.411 PB L2
ENSG00000186056 MATN1-AS1 -74538 sc-eQTL 7.04e-01 0.0345 0.0906 0.411 PB L2
ENSG00000287510 AL137857.1 -87727 sc-eQTL 3.89e-01 0.0833 0.0962 0.411 PB L2
ENSG00000060688 SNRNP40 -652822 sc-eQTL 5.42e-01 -0.0437 0.0716 0.402 Pro_T L2
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 6.12e-01 -0.0462 0.091 0.402 Pro_T L2
ENSG00000134644 PUM1 -422025 sc-eQTL 7.39e-01 0.0284 0.0849 0.402 Pro_T L2
ENSG00000162511 LAPTM5 -113808 sc-eQTL 3.09e-01 0.0619 0.0608 0.402 Pro_T L2
ENSG00000186056 MATN1-AS1 -74538 sc-eQTL 8.35e-01 0.0177 0.0851 0.402 Pro_T L2
ENSG00000287510 AL137857.1 -87727 sc-eQTL 8.75e-01 0.0123 0.0783 0.402 Pro_T L2
ENSG00000060688 SNRNP40 -652822 sc-eQTL 2.83e-02 0.194 0.088 0.402 Treg L2
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 4.38e-01 -0.0667 0.086 0.402 Treg L2
ENSG00000134644 PUM1 -422025 sc-eQTL 7.07e-01 -0.0259 0.0689 0.402 Treg L2
ENSG00000162511 LAPTM5 -113808 sc-eQTL 1.05e-01 -0.128 0.0784 0.402 Treg L2
ENSG00000186056 MATN1-AS1 -74538 sc-eQTL 7.77e-01 0.0228 0.0804 0.402 Treg L2
ENSG00000287510 AL137857.1 -87727 sc-eQTL 3.62e-01 -0.0732 0.0801 0.402 Treg L2
ENSG00000060688 SNRNP40 -652822 sc-eQTL 8.29e-01 0.0195 0.0903 0.383 cDC L2
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 6.98e-01 -0.038 0.0978 0.383 cDC L2
ENSG00000134644 PUM1 -422025 sc-eQTL 6.11e-01 -0.0428 0.0839 0.383 cDC L2
ENSG00000162511 LAPTM5 -113808 sc-eQTL 1.57e-01 -0.0833 0.0586 0.383 cDC L2
ENSG00000168528 SERINC2 -765599 sc-eQTL 1.24e-02 -0.188 0.0743 0.383 cDC L2
ENSG00000284543 LINC01226 -862260 sc-eQTL 5.35e-01 0.0461 0.0742 0.383 cDC L2
ENSG00000287510 AL137857.1 -87727 sc-eQTL 5.23e-02 -0.155 0.0791 0.383 cDC L2
ENSG00000060688 SNRNP40 -652822 sc-eQTL 1.02e-01 -0.118 0.0717 0.402 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 8.39e-01 -0.0163 0.0805 0.402 cMono_IL1B L2
ENSG00000134644 PUM1 -422025 sc-eQTL 4.25e-01 -0.0435 0.0544 0.402 cMono_IL1B L2
ENSG00000162511 LAPTM5 -113808 sc-eQTL 5.20e-02 -0.0927 0.0474 0.402 cMono_IL1B L2
ENSG00000162512 SDC3 -264792 sc-eQTL 8.90e-01 -0.0125 0.0901 0.402 cMono_IL1B L2
ENSG00000168528 SERINC2 -765599 sc-eQTL 6.57e-03 -0.246 0.0896 0.402 cMono_IL1B L2
ENSG00000284543 LINC01226 -862260 sc-eQTL 8.89e-01 0.0113 0.0806 0.402 cMono_IL1B L2
ENSG00000287510 AL137857.1 -87727 sc-eQTL 7.03e-01 -0.0287 0.0752 0.402 cMono_IL1B L2
ENSG00000060688 SNRNP40 -652822 sc-eQTL 6.40e-01 0.0357 0.0762 0.402 cMono_S100A L2
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 8.28e-01 0.0196 0.09 0.402 cMono_S100A L2
ENSG00000134644 PUM1 -422025 sc-eQTL 6.17e-01 0.0326 0.065 0.402 cMono_S100A L2
ENSG00000162511 LAPTM5 -113808 sc-eQTL 1.68e-01 -0.0688 0.0498 0.402 cMono_S100A L2
ENSG00000162512 SDC3 -264792 sc-eQTL 9.54e-01 0.00496 0.0864 0.402 cMono_S100A L2
ENSG00000168528 SERINC2 -765599 sc-eQTL 4.78e-03 -0.256 0.0898 0.402 cMono_S100A L2
ENSG00000284543 LINC01226 -862260 sc-eQTL 3.42e-01 -0.0706 0.0741 0.402 cMono_S100A L2
ENSG00000287510 AL137857.1 -87727 sc-eQTL 7.54e-01 0.0234 0.0746 0.402 cMono_S100A L2
ENSG00000060688 SNRNP40 -652822 sc-eQTL 4.26e-01 -0.0931 0.117 0.391 gdT L2
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 6.19e-01 0.0501 0.1 0.391 gdT L2
ENSG00000134644 PUM1 -422025 sc-eQTL 9.48e-02 -0.172 0.103 0.391 gdT L2
ENSG00000162511 LAPTM5 -113808 sc-eQTL 4.12e-01 -0.0925 0.112 0.391 gdT L2
ENSG00000186056 MATN1-AS1 -74538 sc-eQTL 6.16e-01 -0.0522 0.104 0.391 gdT L2
ENSG00000287510 AL137857.1 -87727 sc-eQTL 3.14e-01 0.101 0.1 0.391 gdT L2
ENSG00000060688 SNRNP40 -652822 sc-eQTL 1.26e-01 -0.13 0.0849 0.409 intMono L2
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 6.01e-01 0.048 0.0917 0.409 intMono L2
ENSG00000134644 PUM1 -422025 sc-eQTL 4.21e-02 0.158 0.0771 0.409 intMono L2
ENSG00000162511 LAPTM5 -113808 sc-eQTL 6.13e-01 -0.0309 0.061 0.409 intMono L2
ENSG00000162512 SDC3 -264792 sc-eQTL 4.84e-01 -0.0585 0.0835 0.409 intMono L2
ENSG00000168528 SERINC2 -765599 sc-eQTL 1.58e-01 -0.123 0.0871 0.409 intMono L2
ENSG00000284543 LINC01226 -862260 sc-eQTL 7.23e-01 0.0294 0.0829 0.409 intMono L2
ENSG00000287510 AL137857.1 -87727 sc-eQTL 9.34e-01 0.00689 0.083 0.409 intMono L2
ENSG00000060688 SNRNP40 -652822 sc-eQTL 5.23e-01 0.0512 0.0799 0.394 ncMono L2
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 7.99e-01 0.0217 0.0852 0.394 ncMono L2
ENSG00000134644 PUM1 -422025 sc-eQTL 9.11e-01 -0.0078 0.0697 0.394 ncMono L2
ENSG00000162511 LAPTM5 -113808 sc-eQTL 6.46e-02 -0.117 0.0627 0.394 ncMono L2
ENSG00000162512 SDC3 -264792 sc-eQTL 6.32e-01 0.034 0.0709 0.394 ncMono L2
ENSG00000168528 SERINC2 -765599 sc-eQTL 6.32e-01 -0.0371 0.0774 0.394 ncMono L2
ENSG00000284543 LINC01226 -862260 sc-eQTL 7.17e-01 -0.0281 0.0773 0.394 ncMono L2
ENSG00000287510 AL137857.1 -87727 sc-eQTL 3.92e-01 -0.0686 0.08 0.394 ncMono L2
ENSG00000060688 SNRNP40 -652822 sc-eQTL 7.93e-01 0.0245 0.093 0.39 pDC L2
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 9.80e-01 0.00252 0.102 0.39 pDC L2
ENSG00000134644 PUM1 -422025 sc-eQTL 1.47e-01 -0.123 0.0841 0.39 pDC L2
ENSG00000162511 LAPTM5 -113808 sc-eQTL 7.48e-01 -0.0253 0.0787 0.39 pDC L2
ENSG00000168528 SERINC2 -765599 sc-eQTL 9.09e-01 0.011 0.0954 0.39 pDC L2
ENSG00000284543 LINC01226 -862260 sc-eQTL 4.93e-01 0.0508 0.074 0.39 pDC L2
ENSG00000287510 AL137857.1 -87727 sc-eQTL 8.21e-01 0.0197 0.0871 0.39 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -652822 sc-eQTL 7.41e-01 -0.0297 0.0898 0.402 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 6.47e-01 -0.0343 0.0747 0.402 B_Memory LOneK1K
ENSG00000134644 PUM1 -422025 sc-eQTL 2.30e-01 -0.0795 0.066 0.402 B_Memory LOneK1K
ENSG00000162510 MATN1 -79619 sc-eQTL 3.89e-01 0.065 0.0754 0.402 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -113808 sc-eQTL 8.41e-01 0.00955 0.0475 0.402 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -74538 sc-eQTL 6.95e-01 0.0246 0.0628 0.402 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -87727 sc-eQTL 3.98e-01 -0.0578 0.0683 0.402 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -652822 sc-eQTL 4.07e-01 -0.0673 0.081 0.402 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 4.56e-01 -0.0479 0.064 0.402 B_Naive LOneK1K
ENSG00000134644 PUM1 -422025 sc-eQTL 4.80e-01 -0.0428 0.0606 0.402 B_Naive LOneK1K
ENSG00000162510 MATN1 -79619 sc-eQTL 8.31e-01 0.0125 0.0584 0.402 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -113808 sc-eQTL 2.91e-01 -0.0434 0.041 0.402 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -74538 sc-eQTL 9.63e-01 -0.00249 0.0531 0.402 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -87727 sc-eQTL 1.85e-01 -0.0835 0.0628 0.402 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -652822 sc-eQTL 3.41e-01 -0.0654 0.0686 0.402 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 8.63e-01 -0.0135 0.0778 0.402 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -422025 sc-eQTL 6.06e-01 -0.0257 0.0496 0.402 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -113808 sc-eQTL 5.64e-02 -0.083 0.0433 0.402 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -264792 sc-eQTL 8.98e-01 0.0114 0.089 0.402 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -765599 sc-eQTL 7.73e-03 -0.242 0.0901 0.402 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -862260 sc-eQTL 7.94e-01 -0.0196 0.0751 0.402 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -87727 sc-eQTL 9.04e-01 0.00848 0.0703 0.402 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -652822 sc-eQTL 5.95e-01 -0.0399 0.075 0.405 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 3.73e-01 0.0732 0.0819 0.405 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -422025 sc-eQTL 8.58e-02 0.115 0.0668 0.405 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -113808 sc-eQTL 4.08e-02 -0.11 0.0533 0.405 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -264792 sc-eQTL 7.31e-01 -0.027 0.0786 0.405 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -765599 sc-eQTL 2.05e-01 -0.103 0.0812 0.405 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -862260 sc-eQTL 9.30e-01 -0.00678 0.0774 0.405 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -87727 sc-eQTL 7.71e-01 -0.0226 0.0774 0.405 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -652822 sc-eQTL 2.96e-01 -0.091 0.0869 0.403 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -653016 sc-eQTL 6.10e-01 -0.0304 0.0595 0.403 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -422025 sc-eQTL 8.83e-01 -0.00962 0.0652 0.403 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -113808 sc-eQTL 8.03e-01 -0.0182 0.0728 0.403 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -74538 sc-eQTL 7.26e-01 -0.0295 0.084 0.403 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -87727 sc-eQTL 3.27e-01 -0.071 0.0723 0.403 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000060688 SNRNP40 -652822 eQTL 0.0233 -0.04 0.0176 0.00104 0.0 0.418

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina