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Genes within 1Mb (chr1:30643167:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -653621 sc-eQTL 4.08e-01 0.0738 0.0891 0.259 B L1
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 8.08e-01 -0.0174 0.0714 0.259 B L1
ENSG00000134644 PUM1 -422824 sc-eQTL 5.49e-01 -0.036 0.0599 0.259 B L1
ENSG00000162510 MATN1 -80418 sc-eQTL 4.98e-02 0.123 0.0625 0.259 B L1
ENSG00000162511 LAPTM5 -114607 sc-eQTL 1.76e-01 0.0667 0.0491 0.259 B L1
ENSG00000186056 MATN1-AS1 -75337 sc-eQTL 3.06e-01 0.0592 0.0577 0.259 B L1
ENSG00000287510 AL137857.1 -88526 sc-eQTL 1.44e-01 0.0999 0.0681 0.259 B L1
ENSG00000060688 SNRNP40 -653621 sc-eQTL 1.93e-01 -0.0994 0.0762 0.259 CD4T L1
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 7.13e-01 -0.022 0.0597 0.259 CD4T L1
ENSG00000134644 PUM1 -422824 sc-eQTL 5.42e-01 0.0325 0.0531 0.259 CD4T L1
ENSG00000162511 LAPTM5 -114607 sc-eQTL 2.53e-01 0.0673 0.0588 0.259 CD4T L1
ENSG00000186056 MATN1-AS1 -75337 sc-eQTL 7.70e-01 0.0154 0.0527 0.259 CD4T L1
ENSG00000287510 AL137857.1 -88526 sc-eQTL 3.90e-01 -0.0543 0.0631 0.259 CD4T L1
ENSG00000060688 SNRNP40 -653621 sc-eQTL 5.36e-01 0.0614 0.099 0.259 CD8T L1
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 5.34e-01 0.0411 0.0659 0.259 CD8T L1
ENSG00000134644 PUM1 -422824 sc-eQTL 2.00e-01 0.0743 0.0579 0.259 CD8T L1
ENSG00000162511 LAPTM5 -114607 sc-eQTL 6.48e-02 0.104 0.0559 0.259 CD8T L1
ENSG00000186056 MATN1-AS1 -75337 sc-eQTL 5.55e-01 -0.039 0.066 0.259 CD8T L1
ENSG00000287510 AL137857.1 -88526 sc-eQTL 4.89e-01 -0.0575 0.083 0.259 CD8T L1
ENSG00000060688 SNRNP40 -653621 sc-eQTL 6.15e-01 -0.0448 0.0891 0.261 DC L1
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 2.88e-01 -0.112 0.105 0.261 DC L1
ENSG00000134644 PUM1 -422824 sc-eQTL 1.00e-01 -0.136 0.0821 0.261 DC L1
ENSG00000162511 LAPTM5 -114607 sc-eQTL 2.91e-01 0.0623 0.0589 0.261 DC L1
ENSG00000168528 SERINC2 -766398 sc-eQTL 3.85e-01 0.0847 0.0972 0.261 DC L1
ENSG00000284543 LINC01226 -863059 sc-eQTL 9.64e-01 0.0029 0.0645 0.261 DC L1
ENSG00000287510 AL137857.1 -88526 sc-eQTL 9.54e-02 0.155 0.0927 0.261 DC L1
ENSG00000060688 SNRNP40 -653621 sc-eQTL 9.31e-01 -0.00594 0.069 0.259 Mono L1
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 4.89e-01 0.0593 0.0855 0.259 Mono L1
ENSG00000134644 PUM1 -422824 sc-eQTL 6.26e-01 0.0268 0.0548 0.259 Mono L1
ENSG00000162511 LAPTM5 -114607 sc-eQTL 1.57e-01 0.0713 0.0502 0.259 Mono L1
ENSG00000162512 SDC3 -265591 sc-eQTL 6.54e-01 -0.0435 0.0969 0.259 Mono L1
ENSG00000168528 SERINC2 -766398 sc-eQTL 6.51e-01 -0.0471 0.104 0.259 Mono L1
ENSG00000284543 LINC01226 -863059 sc-eQTL 7.35e-01 -0.0311 0.0916 0.259 Mono L1
ENSG00000287510 AL137857.1 -88526 sc-eQTL 1.07e-01 -0.129 0.0796 0.259 Mono L1
ENSG00000060688 SNRNP40 -653621 sc-eQTL 2.37e-01 -0.115 0.097 0.26 NK L1
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 4.63e-01 0.0489 0.0665 0.26 NK L1
ENSG00000134644 PUM1 -422824 sc-eQTL 5.21e-01 0.0448 0.0698 0.26 NK L1
ENSG00000162511 LAPTM5 -114607 sc-eQTL 6.59e-01 -0.0355 0.0804 0.26 NK L1
ENSG00000186056 MATN1-AS1 -75337 sc-eQTL 2.49e-01 -0.104 0.0901 0.26 NK L1
ENSG00000287510 AL137857.1 -88526 sc-eQTL 6.97e-01 -0.0326 0.0834 0.26 NK L1
ENSG00000060688 SNRNP40 -653621 sc-eQTL 7.65e-01 0.0217 0.0723 0.259 Other_T L1
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 5.09e-01 0.0511 0.0772 0.259 Other_T L1
ENSG00000134644 PUM1 -422824 sc-eQTL 3.52e-01 0.0647 0.0694 0.259 Other_T L1
ENSG00000162511 LAPTM5 -114607 sc-eQTL 6.37e-02 0.105 0.0565 0.259 Other_T L1
ENSG00000186056 MATN1-AS1 -75337 sc-eQTL 1.91e-01 0.122 0.0929 0.259 Other_T L1
ENSG00000287510 AL137857.1 -88526 sc-eQTL 1.61e-01 -0.136 0.0967 0.259 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -653621 sc-eQTL 5.68e-01 0.0648 0.113 0.255 B_Activated L2
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 7.83e-01 -0.0316 0.114 0.255 B_Activated L2
ENSG00000134644 PUM1 -422824 sc-eQTL 7.65e-01 -0.0318 0.106 0.255 B_Activated L2
ENSG00000162510 MATN1 -80418 sc-eQTL 7.85e-01 0.0253 0.0928 0.255 B_Activated L2
ENSG00000162511 LAPTM5 -114607 sc-eQTL 7.97e-01 0.0167 0.0648 0.255 B_Activated L2
ENSG00000186056 MATN1-AS1 -75337 sc-eQTL 9.59e-01 0.00537 0.105 0.255 B_Activated L2
ENSG00000287510 AL137857.1 -88526 sc-eQTL 6.47e-01 -0.0424 0.0925 0.255 B_Activated L2
ENSG00000060688 SNRNP40 -653621 sc-eQTL 5.99e-01 -0.0582 0.11 0.26 B_Intermediate L2
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 8.67e-01 0.0154 0.0921 0.26 B_Intermediate L2
ENSG00000134644 PUM1 -422824 sc-eQTL 3.85e-01 0.0755 0.0867 0.26 B_Intermediate L2
ENSG00000162510 MATN1 -80418 sc-eQTL 4.64e-01 0.0662 0.0903 0.26 B_Intermediate L2
ENSG00000162511 LAPTM5 -114607 sc-eQTL 9.11e-02 0.0936 0.0551 0.26 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -75337 sc-eQTL 2.04e-01 0.0988 0.0776 0.26 B_Intermediate L2
ENSG00000287510 AL137857.1 -88526 sc-eQTL 9.82e-03 0.224 0.0858 0.26 B_Intermediate L2
ENSG00000060688 SNRNP40 -653621 sc-eQTL 5.44e-01 0.0642 0.106 0.261 B_Memory L2
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 1.01e-01 -0.159 0.0967 0.261 B_Memory L2
ENSG00000134644 PUM1 -422824 sc-eQTL 9.06e-01 0.01 0.0847 0.261 B_Memory L2
ENSG00000162510 MATN1 -80418 sc-eQTL 7.16e-01 0.0295 0.081 0.261 B_Memory L2
ENSG00000162511 LAPTM5 -114607 sc-eQTL 3.78e-01 0.0633 0.0717 0.261 B_Memory L2
ENSG00000186056 MATN1-AS1 -75337 sc-eQTL 8.63e-01 0.0142 0.0822 0.261 B_Memory L2
ENSG00000287510 AL137857.1 -88526 sc-eQTL 1.96e-01 0.124 0.0959 0.261 B_Memory L2
ENSG00000060688 SNRNP40 -653621 sc-eQTL 4.26e-01 0.0765 0.0959 0.259 B_Naive1 L2
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 9.12e-01 -0.00921 0.0829 0.259 B_Naive1 L2
ENSG00000134644 PUM1 -422824 sc-eQTL 2.58e-02 -0.162 0.0723 0.259 B_Naive1 L2
ENSG00000162510 MATN1 -80418 sc-eQTL 3.22e-02 0.158 0.0734 0.259 B_Naive1 L2
ENSG00000162511 LAPTM5 -114607 sc-eQTL 1.53e-01 0.0708 0.0493 0.259 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -75337 sc-eQTL 5.51e-01 0.0388 0.0651 0.259 B_Naive1 L2
ENSG00000287510 AL137857.1 -88526 sc-eQTL 5.45e-01 0.0487 0.0804 0.259 B_Naive1 L2
ENSG00000060688 SNRNP40 -653621 sc-eQTL 3.82e-01 -0.0904 0.103 0.26 B_Naive2 L2
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 2.72e-01 0.0938 0.0851 0.26 B_Naive2 L2
ENSG00000134644 PUM1 -422824 sc-eQTL 2.89e-01 0.0887 0.0833 0.26 B_Naive2 L2
ENSG00000162510 MATN1 -80418 sc-eQTL 2.76e-01 0.0874 0.08 0.26 B_Naive2 L2
ENSG00000162511 LAPTM5 -114607 sc-eQTL 5.74e-01 0.0307 0.0544 0.26 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -75337 sc-eQTL 7.21e-01 0.0283 0.0793 0.26 B_Naive2 L2
ENSG00000287510 AL137857.1 -88526 sc-eQTL 6.84e-01 0.0349 0.0856 0.26 B_Naive2 L2
ENSG00000060688 SNRNP40 -653621 sc-eQTL 4.86e-01 -0.0703 0.101 0.259 CD4_CTL L2
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 3.67e-01 -0.0895 0.0989 0.259 CD4_CTL L2
ENSG00000134644 PUM1 -422824 sc-eQTL 1.81e-01 0.13 0.0967 0.259 CD4_CTL L2
ENSG00000162511 LAPTM5 -114607 sc-eQTL 6.36e-01 -0.041 0.0866 0.259 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -75337 sc-eQTL 6.69e-01 0.0405 0.0947 0.259 CD4_CTL L2
ENSG00000287510 AL137857.1 -88526 sc-eQTL 7.08e-02 0.151 0.0829 0.259 CD4_CTL L2
ENSG00000060688 SNRNP40 -653621 sc-eQTL 5.06e-01 0.0528 0.0793 0.259 CD4_Naive L2
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 8.82e-01 -0.0105 0.0704 0.259 CD4_Naive L2
ENSG00000134644 PUM1 -422824 sc-eQTL 9.73e-01 -0.00191 0.0562 0.259 CD4_Naive L2
ENSG00000162511 LAPTM5 -114607 sc-eQTL 6.07e-02 0.113 0.0597 0.259 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -75337 sc-eQTL 9.42e-01 0.00446 0.0611 0.259 CD4_Naive L2
ENSG00000287510 AL137857.1 -88526 sc-eQTL 3.72e-02 -0.146 0.0695 0.259 CD4_Naive L2
ENSG00000060688 SNRNP40 -653621 sc-eQTL 5.73e-04 -0.34 0.0972 0.259 CD4_TCM L2
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 8.52e-01 -0.015 0.0806 0.259 CD4_TCM L2
ENSG00000134644 PUM1 -422824 sc-eQTL 7.96e-01 0.0185 0.0713 0.259 CD4_TCM L2
ENSG00000162511 LAPTM5 -114607 sc-eQTL 3.28e-01 0.0579 0.0591 0.259 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -75337 sc-eQTL 4.94e-01 0.0515 0.075 0.259 CD4_TCM L2
ENSG00000287510 AL137857.1 -88526 sc-eQTL 7.06e-01 0.0316 0.0836 0.259 CD4_TCM L2
ENSG00000060688 SNRNP40 -653621 sc-eQTL 5.80e-01 -0.0554 0.0999 0.259 CD4_TEM L2
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 4.04e-01 0.0795 0.0951 0.259 CD4_TEM L2
ENSG00000134644 PUM1 -422824 sc-eQTL 8.19e-01 0.0182 0.0793 0.259 CD4_TEM L2
ENSG00000162511 LAPTM5 -114607 sc-eQTL 6.18e-01 -0.0401 0.0802 0.259 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -75337 sc-eQTL 8.94e-01 -0.0125 0.0939 0.259 CD4_TEM L2
ENSG00000287510 AL137857.1 -88526 sc-eQTL 4.13e-02 0.188 0.0916 0.259 CD4_TEM L2
ENSG00000060688 SNRNP40 -653621 sc-eQTL 6.26e-01 0.0529 0.108 0.259 CD8_CTL L2
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 9.60e-01 -0.00418 0.0831 0.259 CD8_CTL L2
ENSG00000134644 PUM1 -422824 sc-eQTL 8.66e-01 -0.0136 0.0807 0.259 CD8_CTL L2
ENSG00000162511 LAPTM5 -114607 sc-eQTL 3.16e-01 0.0896 0.0892 0.259 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -75337 sc-eQTL 4.97e-02 -0.184 0.0931 0.259 CD8_CTL L2
ENSG00000287510 AL137857.1 -88526 sc-eQTL 4.80e-01 -0.0625 0.0883 0.259 CD8_CTL L2
ENSG00000060688 SNRNP40 -653621 sc-eQTL 6.94e-02 0.182 0.0995 0.259 CD8_Naive L2
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 3.09e-01 0.0879 0.0862 0.259 CD8_Naive L2
ENSG00000134644 PUM1 -422824 sc-eQTL 1.73e-02 0.165 0.0686 0.259 CD8_Naive L2
ENSG00000162511 LAPTM5 -114607 sc-eQTL 9.33e-02 0.112 0.0662 0.259 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -75337 sc-eQTL 3.07e-01 -0.085 0.083 0.259 CD8_Naive L2
ENSG00000287510 AL137857.1 -88526 sc-eQTL 5.58e-01 -0.0531 0.0905 0.259 CD8_Naive L2
ENSG00000060688 SNRNP40 -653621 sc-eQTL 1.05e-01 -0.183 0.112 0.259 CD8_TCM L2
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 6.71e-01 -0.044 0.103 0.259 CD8_TCM L2
ENSG00000134644 PUM1 -422824 sc-eQTL 1.84e-01 -0.129 0.0968 0.259 CD8_TCM L2
ENSG00000162511 LAPTM5 -114607 sc-eQTL 6.15e-01 0.0513 0.102 0.259 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -75337 sc-eQTL 5.64e-01 -0.0544 0.0942 0.259 CD8_TCM L2
ENSG00000287510 AL137857.1 -88526 sc-eQTL 4.85e-01 -0.0665 0.0951 0.259 CD8_TCM L2
ENSG00000060688 SNRNP40 -653621 sc-eQTL 7.55e-01 0.0328 0.105 0.26 CD8_TEM L2
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 8.41e-01 -0.0202 0.101 0.26 CD8_TEM L2
ENSG00000134644 PUM1 -422824 sc-eQTL 7.44e-01 0.0336 0.103 0.26 CD8_TEM L2
ENSG00000162511 LAPTM5 -114607 sc-eQTL 3.74e-01 -0.0861 0.0966 0.26 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -75337 sc-eQTL 5.33e-01 0.0627 0.1 0.26 CD8_TEM L2
ENSG00000287510 AL137857.1 -88526 sc-eQTL 3.05e-01 0.0933 0.0907 0.26 CD8_TEM L2
ENSG00000060688 SNRNP40 -653621 sc-eQTL 4.03e-01 -0.0888 0.106 0.26 MAIT L2
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 9.08e-01 -0.0108 0.0941 0.26 MAIT L2
ENSG00000134644 PUM1 -422824 sc-eQTL 7.81e-01 0.0251 0.0902 0.26 MAIT L2
ENSG00000162511 LAPTM5 -114607 sc-eQTL 1.36e-01 0.127 0.0847 0.26 MAIT L2
ENSG00000186056 MATN1-AS1 -75337 sc-eQTL 3.11e-01 0.096 0.0946 0.26 MAIT L2
ENSG00000287510 AL137857.1 -88526 sc-eQTL 4.16e-01 -0.0795 0.0975 0.26 MAIT L2
ENSG00000060688 SNRNP40 -653621 sc-eQTL 7.07e-01 -0.0415 0.111 0.264 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 2.04e-02 0.215 0.0922 0.264 NK_CD56bright L2
ENSG00000134644 PUM1 -422824 sc-eQTL 5.13e-01 -0.0642 0.098 0.264 NK_CD56bright L2
ENSG00000162511 LAPTM5 -114607 sc-eQTL 1.05e-01 -0.157 0.0961 0.264 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -75337 sc-eQTL 2.06e-01 -0.123 0.0968 0.264 NK_CD56bright L2
ENSG00000287510 AL137857.1 -88526 sc-eQTL 6.90e-01 -0.0382 0.0958 0.264 NK_CD56bright L2
ENSG00000060688 SNRNP40 -653621 sc-eQTL 7.09e-02 -0.185 0.102 0.259 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 5.62e-01 -0.044 0.0759 0.259 NK_CD56dim L2
ENSG00000134644 PUM1 -422824 sc-eQTL 1.30e-01 0.118 0.0775 0.259 NK_CD56dim L2
ENSG00000162511 LAPTM5 -114607 sc-eQTL 8.85e-01 0.0121 0.0831 0.259 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -75337 sc-eQTL 3.41e-01 -0.0991 0.104 0.259 NK_CD56dim L2
ENSG00000287510 AL137857.1 -88526 sc-eQTL 8.11e-01 0.0205 0.0858 0.259 NK_CD56dim L2
ENSG00000060688 SNRNP40 -653621 sc-eQTL 9.43e-01 -0.00782 0.11 0.256 NK_HLA L2
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 1.97e-02 -0.228 0.097 0.256 NK_HLA L2
ENSG00000134644 PUM1 -422824 sc-eQTL 4.57e-01 0.0713 0.0957 0.256 NK_HLA L2
ENSG00000162511 LAPTM5 -114607 sc-eQTL 6.10e-01 -0.0467 0.0914 0.256 NK_HLA L2
ENSG00000186056 MATN1-AS1 -75337 sc-eQTL 9.66e-01 -0.00416 0.0973 0.256 NK_HLA L2
ENSG00000287510 AL137857.1 -88526 sc-eQTL 3.77e-02 -0.195 0.0931 0.256 NK_HLA L2
ENSG00000060688 SNRNP40 -653621 sc-eQTL 8.04e-01 -0.0248 0.0998 0.259 NK_cytokine L2
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 3.52e-02 0.163 0.0771 0.259 NK_cytokine L2
ENSG00000134644 PUM1 -422824 sc-eQTL 8.97e-01 -0.0109 0.0843 0.259 NK_cytokine L2
ENSG00000162511 LAPTM5 -114607 sc-eQTL 9.96e-01 0.000428 0.0928 0.259 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -75337 sc-eQTL 5.48e-01 -0.0591 0.0982 0.259 NK_cytokine L2
ENSG00000287510 AL137857.1 -88526 sc-eQTL 8.49e-01 -0.0175 0.0915 0.259 NK_cytokine L2
ENSG00000060688 SNRNP40 -653621 sc-eQTL 4.99e-01 -0.0754 0.111 0.289 PB L2
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 2.70e-01 -0.143 0.128 0.289 PB L2
ENSG00000134644 PUM1 -422824 sc-eQTL 7.64e-01 0.0338 0.112 0.289 PB L2
ENSG00000162510 MATN1 -80418 sc-eQTL 8.68e-01 0.0174 0.105 0.289 PB L2
ENSG00000162511 LAPTM5 -114607 sc-eQTL 1.21e-01 0.116 0.0739 0.289 PB L2
ENSG00000186056 MATN1-AS1 -75337 sc-eQTL 9.82e-01 0.00229 0.102 0.289 PB L2
ENSG00000287510 AL137857.1 -88526 sc-eQTL 8.93e-01 0.0147 0.109 0.289 PB L2
ENSG00000060688 SNRNP40 -653621 sc-eQTL 5.02e-01 -0.0532 0.0792 0.259 Pro_T L2
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 5.07e-01 -0.0669 0.101 0.259 Pro_T L2
ENSG00000134644 PUM1 -422824 sc-eQTL 7.21e-01 -0.0336 0.0939 0.259 Pro_T L2
ENSG00000162511 LAPTM5 -114607 sc-eQTL 8.29e-01 -0.0145 0.0673 0.259 Pro_T L2
ENSG00000186056 MATN1-AS1 -75337 sc-eQTL 6.60e-01 0.0414 0.0941 0.259 Pro_T L2
ENSG00000287510 AL137857.1 -88526 sc-eQTL 4.22e-01 -0.0695 0.0864 0.259 Pro_T L2
ENSG00000060688 SNRNP40 -653621 sc-eQTL 1.55e-01 -0.148 0.103 0.259 Treg L2
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 8.44e-01 -0.0198 0.101 0.259 Treg L2
ENSG00000134644 PUM1 -422824 sc-eQTL 2.86e-02 0.175 0.0796 0.259 Treg L2
ENSG00000162511 LAPTM5 -114607 sc-eQTL 8.51e-01 -0.0173 0.0921 0.259 Treg L2
ENSG00000186056 MATN1-AS1 -75337 sc-eQTL 2.65e-01 -0.105 0.0936 0.259 Treg L2
ENSG00000287510 AL137857.1 -88526 sc-eQTL 6.13e-02 0.175 0.093 0.259 Treg L2
ENSG00000060688 SNRNP40 -653621 sc-eQTL 8.85e-01 0.015 0.104 0.261 cDC L2
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 8.12e-01 -0.0268 0.112 0.261 cDC L2
ENSG00000134644 PUM1 -422824 sc-eQTL 9.02e-01 0.0119 0.0963 0.261 cDC L2
ENSG00000162511 LAPTM5 -114607 sc-eQTL 3.52e-01 0.0629 0.0674 0.261 cDC L2
ENSG00000168528 SERINC2 -766398 sc-eQTL 1.44e-01 0.126 0.0862 0.261 cDC L2
ENSG00000284543 LINC01226 -863059 sc-eQTL 1.41e-01 -0.125 0.0847 0.261 cDC L2
ENSG00000287510 AL137857.1 -88526 sc-eQTL 9.23e-02 0.154 0.091 0.261 cDC L2
ENSG00000060688 SNRNP40 -653621 sc-eQTL 6.54e-01 -0.0373 0.0831 0.259 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 4.14e-01 0.0759 0.0926 0.259 cMono_IL1B L2
ENSG00000134644 PUM1 -422824 sc-eQTL 2.88e-01 0.0667 0.0626 0.259 cMono_IL1B L2
ENSG00000162511 LAPTM5 -114607 sc-eQTL 1.79e-01 0.074 0.0549 0.259 cMono_IL1B L2
ENSG00000162512 SDC3 -265591 sc-eQTL 9.58e-01 0.00542 0.104 0.259 cMono_IL1B L2
ENSG00000168528 SERINC2 -766398 sc-eQTL 5.74e-01 -0.0591 0.105 0.259 cMono_IL1B L2
ENSG00000284543 LINC01226 -863059 sc-eQTL 6.00e-01 -0.0488 0.0928 0.259 cMono_IL1B L2
ENSG00000287510 AL137857.1 -88526 sc-eQTL 4.45e-01 -0.0663 0.0865 0.259 cMono_IL1B L2
ENSG00000060688 SNRNP40 -653621 sc-eQTL 7.04e-01 -0.0331 0.0869 0.259 cMono_S100A L2
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 6.98e-01 0.0399 0.103 0.259 cMono_S100A L2
ENSG00000134644 PUM1 -422824 sc-eQTL 7.80e-01 0.0208 0.0742 0.259 cMono_S100A L2
ENSG00000162511 LAPTM5 -114607 sc-eQTL 5.76e-01 0.0319 0.057 0.259 cMono_S100A L2
ENSG00000162512 SDC3 -265591 sc-eQTL 4.63e-01 -0.0723 0.0985 0.259 cMono_S100A L2
ENSG00000168528 SERINC2 -766398 sc-eQTL 8.85e-01 -0.0151 0.104 0.259 cMono_S100A L2
ENSG00000284543 LINC01226 -863059 sc-eQTL 3.19e-01 0.0845 0.0846 0.259 cMono_S100A L2
ENSG00000287510 AL137857.1 -88526 sc-eQTL 3.87e-02 -0.175 0.0843 0.259 cMono_S100A L2
ENSG00000060688 SNRNP40 -653621 sc-eQTL 3.54e-01 0.125 0.134 0.282 gdT L2
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 4.06e-01 0.0963 0.116 0.282 gdT L2
ENSG00000134644 PUM1 -422824 sc-eQTL 7.10e-02 0.215 0.118 0.282 gdT L2
ENSG00000162511 LAPTM5 -114607 sc-eQTL 8.70e-01 -0.0213 0.13 0.282 gdT L2
ENSG00000186056 MATN1-AS1 -75337 sc-eQTL 8.91e-01 0.0165 0.12 0.282 gdT L2
ENSG00000287510 AL137857.1 -88526 sc-eQTL 1.39e-01 -0.171 0.115 0.282 gdT L2
ENSG00000060688 SNRNP40 -653621 sc-eQTL 8.15e-01 0.0229 0.098 0.258 intMono L2
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 8.98e-01 -0.0135 0.105 0.258 intMono L2
ENSG00000134644 PUM1 -422824 sc-eQTL 7.37e-02 -0.159 0.0887 0.258 intMono L2
ENSG00000162511 LAPTM5 -114607 sc-eQTL 3.86e-01 0.0608 0.07 0.258 intMono L2
ENSG00000162512 SDC3 -265591 sc-eQTL 6.44e-01 0.0445 0.096 0.258 intMono L2
ENSG00000168528 SERINC2 -766398 sc-eQTL 6.51e-01 0.0455 0.1 0.258 intMono L2
ENSG00000284543 LINC01226 -863059 sc-eQTL 3.87e-01 -0.0823 0.0951 0.258 intMono L2
ENSG00000287510 AL137857.1 -88526 sc-eQTL 4.62e-02 -0.189 0.0944 0.258 intMono L2
ENSG00000060688 SNRNP40 -653621 sc-eQTL 8.11e-01 0.0223 0.0932 0.26 ncMono L2
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 9.56e-01 -0.00555 0.0994 0.26 ncMono L2
ENSG00000134644 PUM1 -422824 sc-eQTL 6.95e-01 -0.0319 0.0812 0.26 ncMono L2
ENSG00000162511 LAPTM5 -114607 sc-eQTL 2.43e-01 0.0861 0.0735 0.26 ncMono L2
ENSG00000162512 SDC3 -265591 sc-eQTL 1.07e-01 -0.133 0.0822 0.26 ncMono L2
ENSG00000168528 SERINC2 -766398 sc-eQTL 9.55e-01 -0.00508 0.0903 0.26 ncMono L2
ENSG00000284543 LINC01226 -863059 sc-eQTL 6.63e-01 0.0394 0.0902 0.26 ncMono L2
ENSG00000287510 AL137857.1 -88526 sc-eQTL 7.47e-01 0.0302 0.0935 0.26 ncMono L2
ENSG00000060688 SNRNP40 -653621 sc-eQTL 3.12e-01 -0.106 0.105 0.251 pDC L2
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 4.39e-01 0.0892 0.115 0.251 pDC L2
ENSG00000134644 PUM1 -422824 sc-eQTL 9.66e-01 -0.00412 0.0955 0.251 pDC L2
ENSG00000162511 LAPTM5 -114607 sc-eQTL 7.28e-01 0.0309 0.0887 0.251 pDC L2
ENSG00000168528 SERINC2 -766398 sc-eQTL 3.54e-01 -0.0998 0.107 0.251 pDC L2
ENSG00000284543 LINC01226 -863059 sc-eQTL 7.78e-01 -0.0236 0.0835 0.251 pDC L2
ENSG00000287510 AL137857.1 -88526 sc-eQTL 7.85e-01 -0.0268 0.0983 0.251 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -653621 sc-eQTL 4.65e-01 0.0762 0.104 0.259 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 6.66e-01 -0.0374 0.0867 0.259 B_Memory LOneK1K
ENSG00000134644 PUM1 -422824 sc-eQTL 5.38e-01 0.0473 0.0768 0.259 B_Memory LOneK1K
ENSG00000162510 MATN1 -80418 sc-eQTL 3.54e-01 0.0812 0.0874 0.259 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -114607 sc-eQTL 4.47e-01 0.0418 0.055 0.259 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -75337 sc-eQTL 3.75e-01 0.0646 0.0727 0.259 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -88526 sc-eQTL 2.86e-02 0.173 0.0784 0.259 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -653621 sc-eQTL 5.40e-01 0.0576 0.0938 0.259 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 3.18e-01 0.0742 0.074 0.259 B_Naive LOneK1K
ENSG00000134644 PUM1 -422824 sc-eQTL 8.62e-01 -0.0122 0.0702 0.259 B_Naive LOneK1K
ENSG00000162510 MATN1 -80418 sc-eQTL 5.73e-02 0.128 0.067 0.259 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -114607 sc-eQTL 9.87e-02 0.0784 0.0473 0.259 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -75337 sc-eQTL 8.55e-01 0.0112 0.0614 0.259 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -88526 sc-eQTL 3.43e-01 0.0693 0.0728 0.259 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -653621 sc-eQTL 9.96e-01 0.000391 0.0787 0.259 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 4.19e-01 0.072 0.089 0.259 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -422824 sc-eQTL 4.25e-01 0.0454 0.0568 0.259 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -114607 sc-eQTL 9.57e-02 0.0831 0.0496 0.259 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -265591 sc-eQTL 7.36e-01 -0.0344 0.102 0.259 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -766398 sc-eQTL 6.70e-01 -0.0447 0.105 0.259 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -863059 sc-eQTL 8.81e-01 -0.0129 0.086 0.259 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -88526 sc-eQTL 8.71e-02 -0.137 0.0799 0.259 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -653621 sc-eQTL 8.39e-01 0.0178 0.0871 0.256 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 9.45e-01 0.00658 0.0953 0.256 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -422824 sc-eQTL 1.17e-01 -0.122 0.0776 0.256 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -114607 sc-eQTL 1.95e-01 0.0809 0.0622 0.256 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -265591 sc-eQTL 8.25e-01 0.0202 0.0912 0.256 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -766398 sc-eQTL 6.89e-01 0.0379 0.0946 0.256 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -863059 sc-eQTL 6.26e-01 -0.0438 0.0898 0.256 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -88526 sc-eQTL 3.14e-01 -0.0906 0.0897 0.256 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -653621 sc-eQTL 3.16e-01 -0.0984 0.0979 0.259 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -653815 sc-eQTL 4.65e-01 0.049 0.067 0.259 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -422824 sc-eQTL 3.43e-01 0.0697 0.0733 0.259 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -114607 sc-eQTL 8.48e-01 -0.0158 0.0821 0.259 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -75337 sc-eQTL 3.93e-01 -0.0809 0.0946 0.259 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -88526 sc-eQTL 6.12e-01 -0.0416 0.0817 0.259 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000186056 MATN1-AS1 -75337 eQTL 2.53e-02 -0.034 0.0152 0.0 0.0 0.212

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000284543 \N -863114 2.67e-07 1.16e-07 3.54e-08 1.82e-07 8.83e-08 9.87e-08 1.42e-07 5.33e-08 1.41e-07 4.4e-08 1.56e-07 7.75e-08 1.41e-07 6.38e-08 5.84e-08 7.17e-08 3.88e-08 1.14e-07 5.19e-08 4.07e-08 1.04e-07 1.26e-07 1.32e-07 4.16e-08 1.32e-07 1.14e-07 1.11e-07 9.32e-08 1.05e-07 1.11e-07 9.73e-08 4.03e-08 3.26e-08 8.82e-08 8.98e-08 3.97e-08 4.89e-08 9.68e-08 7.52e-08 3.03e-08 4.46e-08 1.35e-07 3.99e-08 2.1e-08 6.38e-08 1.67e-08 1.23e-07 3.99e-09 4.79e-08